.gitattributes
LICENSE
MANIFEST.in
README.md
setup.py
todo.md
Utilities_pipeline/Part-1-Train_model.py
Utilities_pipeline/Part-2-Generate_PRE_fa.py
Utilities_pipeline/Part-3-Predict_PRE_score.py
Utilities_pipeline/Part-4-Calculate_eQTac_correlation.py
Utilities_pipeline/Part-All-eQTac_pipeline.py
Utilities_pipeline/example_All_pipeline.sh
Utilities_pipeline/example_Part_pipeline.sh
Utilities_pipeline/nohup.out
Utilities_pipeline/output_eQTac_part/test.positive.pos.bed
Utilities_pipeline/test_data/test.exclude.bed
Utilities_pipeline/test_data/test.exp_residual
Utilities_pipeline/test_data/test.geno.bed
Utilities_pipeline/test_data/test.geno.bim
Utilities_pipeline/test_data/test.geno.fam
Utilities_pipeline/test_data/test.geno.snplist
Utilities_pipeline/test_data/test.hg19.chr17.fa
Utilities_pipeline/test_data/test.hg19.chr17.fa.fai
Utilities_pipeline/test_data/test.positive.bed
Utilities_pipeline/test_data/test.pre.bed
dist/eQTac-1.0.16-py3-none-any.whl
dist/eQTac-1.0.16.tar.gz
eQTac/__init__.py
eQTac/control_FDR.py
eQTac/eQTac_correlation.py
eQTac/eQTac_permutation.py
eQTac/filter_bkg.py
eQTac/generate_PRE.py
eQTac/generate_mut_fa.py
eQTac/generate_snp_dict.py
eQTac/geno2score.py
eQTac/get_nullseq.py
eQTac.egg-info/PKG-INFO
eQTac.egg-info/SOURCES.txt
eQTac.egg-info/dependency_links.txt
eQTac.egg-info/requires.txt
eQTac.egg-info/top_level.txt
eQTac/__pycache__/__init__.cpython-38.pyc
eQTac/__pycache__/control_FDR.cpython-38.pyc
eQTac/__pycache__/eQTac_correlation.cpython-38.pyc
eQTac/__pycache__/eQTac_permutation.cpython-38.pyc
eQTac/__pycache__/filter_bkg.cpython-38.pyc
eQTac/__pycache__/generate_PRE.cpython-38.pyc
eQTac/__pycache__/generate_mut_fa.cpython-38.pyc
eQTac/__pycache__/generate_snp_dict.cpython-38.pyc
eQTac/__pycache__/geno2score.cpython-38.pyc
eQTac/__pycache__/get_nullseq.cpython-38.pyc
imgs/Schematic.png