MERCI - Summary of options:
 -p    negative_train.fasta
 -n    positive_train.fasta
 -k 	  400
 -fp   5
 -fn   0
 -o    negative_motif.txt
 -l    10000
 -s    10000
 -c    NONE
 -g    0
 -gl   1
 -para 0


Motifs:
 A K D
 S K I K
 D L A
 S K I K K
 H V Q
 N K L
 H R K
 I N K Q
 K D L A
 K I N K Q
 N H V
 N K A K
 N K Q
 N N H
 N N H V
 R I K T
 C K I N K Q
 C K I N K Q C
 E A I
 F Q G
 G K I I K
 G L G S L
 H E
 H E A
 I N K Q C
 I N N H
 I N N H V
 K H I I
 K H I I K
 K I N K Q C
 K L I N N
 K L I N N H
 K L I N N H V
 K R I K T
 L I N N
 L I N N H
 L I N N H V
 N H V Q
 N K Q C
 N N H V Q
 R R F W
 S K I K K L
 V A K G V
 W R R F
 W R R F W
 A A A N
 A A A N A
 A A A N A A
 A A N A
 A A N A A
 A C K I N K Q
 A C K I N K Q C
 A I K L I N N
 A I K L I N N H
 A I K L I N N H V
 A K D F
 A K D F I
 A K D F I K
 A K D F I K E
 A K D F I K E K
 A K D F I K E K G
 A K D L
 A K D L A
 A N A A
 D F I K
 D F I K E
 D F I K E K
 D F I K E K G
 D L A G
 E A I K
 E A I K L
 E K G
 F I K E
 F I K E K
 F I K E K G
 F Q G I
 F Q G I H
 F V A C K I N K Q
 F V A C K I N K Q C
 G I H E
 G I H E A
 G K I I K V
 G L N
 G L N A
 H E A I
 H E A I K
 H E A I K L
 I H E
 I H E A
 I K E K
 I K E K G
 I K L I N N
 I K L I N N H
 I K L I N N H V
 I L K H I
 I N N H V Q
 K A K D
 K A K D F
 K A K D F I
 K A K D F I K
 K A K D F I K E
 K A K D F I K E K
 K A K D F I K E K G
 K D F I K
 K D F I K E
 K D F I K E K
 K D F I K E K G
 K E K G
 K K V F Q
 K K V F Q G
 K L A K A
 K L I N N H V Q
 K V F Q
 K V F Q G
 L I N N H V Q
 L K H I I
 L K H I I K
 L N K A K
 L N K A K D
 L N K A K D F
 L N K A K D F I
 L N K A K D F I K
 L N K A K D F I K E
 L N K A K D F I K E K
 L N K A K D F I K E K G
 L P H V
 L T G
 N K A K D
 N K A K D F
 N K A K D F I
 N K A K D F I K
 N K A K D F I K E
 N K A K D F I K E K
 N K A K D F I K E K G
 P H V
 Q G I H
 T W Y
 V A C K I N K Q
 V A C K I N K Q C
 V F Q
 V F Q G
 W L N K
 W L N K A
 W L N K A K
 W L N K A K D
 W L N K A K D F
 W L N K A K D F I
 W L N K A K D F I K
 W L N K A K D F I K E
 W L N K A K D F I K E K
 W L N K A K D F I K E K G
 W S K I K
 A I K L I N N H V Q
 A L K K V F Q
 A L K K V F Q G
 E A I K L I
 E A I K L I N
 F K A G
 F Q G I H E
 F Q G I H E A
 F Q N
 G I H E A I
 G I H E A I K
 G I H E A I K L
 G L N A L
 G L N A L K
 G L N A L K K
 G T L V N
 H E A I K L I
 H E A I K L I N
 I H E A I
 I H E A I K
 I H E A I K L
 I K L I N N H V Q
 I L K H I I
 I L K H I I K
 I L K V
 I W F
 I W F Q
 I W F Q N
 K K I I A
 K K L F K
 K K L F K K
 K K V F Q G I
 K K V F Q G I H
 K P F
 K V F Q G I
 K V F Q G I H
 L G K I I
 L G K I I K
 L G K I I K V
 L K K V F Q
 L K K V F Q G
 L N A L
 L N A L K
 L N A L K K
 L V K G
 N A L K
 N A L K K
 P T K
 Q G I H E
 Q G I H E A
 R W K K
 S K I K K L L
 T K G
 T K W W K
 V A G L L
 V A G L L K
 V F Q G I
 V F Q G I H
 V N K L
 W F Q
 W F Q N
 W G A I
 W K K I L G K
 A A A N A A L
 A A A N A A L N
 A A K T
 A A N A A L
 A A N A A L N
 A G L G
 A G L G S
 A G L G S L
 A H R
 A H R K
 A I L K H
 A K D F I K E K G L
 A K D L A G
 A K G V A K D
 A K G V A K D L
 A K G V A K D L A
 A K V V
 A L K K V F Q G I
 A L K K V F Q G I H
 A N A A L
 A N A A L N
 D F I K E K G L
 E A I K L I N N
 E A I K L I N N H
 E A I K L I N N H V
 E K G L
 E W
 E W L
 E W L N
 E W L N K
 E W L N K A
 E W L N K A K
 E W L N K A K D
 E W L N K A K D F
 E W L N K A K D F I
 E W L N K A K D F I K
 E W L N K A K D F I K E
 E W L N K A K D F I K E K
 E W L N K A K D F I K E K G
 F I K E K G L
 F K A G L
 F K A G L G
 F K A G L G S
 F K A G L G S L
 F Q G I H E A I
 F Q G I H E A I K
 F Q G I H E A I K L
 G A G K
 G A I L K H
 G F V A C K I N K Q
 G F V A C K I N K Q C
 G I A A H
 G I A A H V
 G I A A H V A
 G I H E A I K L I
 G I H E A I K L I N
 G L G F V A C K I N K Q
 G L G F V A C K I N K Q C
 G L G S L V
 G L G S L V K
 G L G S L V K G
 G L G S L V K G I
 G L N A L K K V
 G L N A L K K V F
 G S L V
 G S L V K
 G S L V K G
 G S L V K G I
 G T L V N L
 G V A K D
 G V A K D L
 G V A K D L A
 G V A K G V
 G V A K G V A
 G V A K G V A K
 H E A I K L I N N
 H E A I K L I N N H
 H E A I K L I N N H V
 H R A
 H R A H
 H R A H R
 H R A H R K
 I A A H
 I A A H V
 I A A H V A
 I F K A G
 I F K A G L
 I F K A G L G
 I F K A G L G S
 I F K A G L G S L
 I H E A I K L I
 I H E A I K L I N
 I I K V V
 I I K V V K
 I K E K G L
 I L G K I I
 I L G K I I K
 I L G K I I K V
 I L S K
 K A G L G
 K A G L G S
 K A G L G S L
 K A K D F I K E K G L
 K D F I K E K G L
 K D L A G
 K E K G L
 K E W
 K E W L
 K E W L N
 K E W L N K
 K E W L N K A
 K E W L N K A K
 K E W L N K A K D
 K E W L N K A K D F
 K E W L N K A K D F I
 K E W L N K A K D F I K
 K E W L N K A K D F I K E
 K E W L N K A K D F I K E K
 K E W L N K A K D F I K E K G
 K G I A
 K G I A A
 K G I A A H
 K G I A A H V
 K G I A A H V A
 K G V A K D
 K G V A K D L
 K G V A K D L A
 K G V A K G
 K G V A K G V
 K G V A K G V A
 K G V A K G V A K
 K I I K V V
 K I I K V V K
 K I K K L L K
 K I L G K I
 K K I I A K
 K K I L G K I
 K K L K K I
 K K V A K
 K K V F Q G I H E
 K K V F Q G I H E A
 K R W K
 K R W K K
 K V A A
 K V F Q G I H E
 K V F Q G I H E A
 L G F V A C K I N K Q
 L G F V A C K I N K Q C
 L G M L
 L G S L V
 L G S L V K
 L G S L V K G
 L G S L V K G I
 L G T L V N
 L K K V F Q G I
 L K K V F Q G I H
 L K V A
 L K V A A
 L L K K I L
 L L K K I L K
 L N A L K K V
 L N A L K K V F
 L N K A K D F I K E K G L
 L S A A A
 L S A A A N
 L S A A A N A
 L S A A A N A A
 L S K I K
 L S K I K K
 L V K G I
 N A A L
 N A A L N
 N A L K K V
 N A L K K V F
 N K A K D F I K E K G L
 N K L T
 N W G A I
 P F K
 P F R
 P F R R
 P T K W
 Q G I H E A I
 Q G I H E A I K
 Q G I H E A I K L
 R A H
 R A H R
 R A H R K
 R I K T L
 R T W Y
 R W K K W
 S A A A
 S A A A N
 S A A A N A
 S A A A N A A
 S K I K K L L K
 S L V K G
 S L V K G I
 T K W W K G
 T W P T
 T W P T K
 T W P T K W
 T W Y R
 T W Y R K
 T W Y R K A
 V A K D
 V A K D L
 V A K D L A
 V A K G V A
 V A K G V A K
 V F Q G I H E
 V F Q G I H E A
 V G L G F V A C K I N K Q
 V G L G F V A C K I N K Q C
 V K G I
 V N K L T
 V V N K
 V V N K L
 V V N K L T
 W G A I L
 W G A I L K
 W K K I L G K I
 W K K V L
 W L N K A K D F I K E K G L
 W P T
 W P T K
 W P T K W
 W Y R
 W Y R K
 W Y R K A
 Y R K A
