LICENSE.txt
MANIFEST.in
PKG-INFO
README.md
distribute_setup.py
setup.py
bin/annotate_CpG.py
bin/beta_profile.py
bin/chrom_distribution.py
bin/dmc_fisher.py
bin/dmc_glm.py
bin/dmc_logit.py
bin/dmc_nonparametric.py
bin/dmc_ttest.py
bin/genomic_distribution_1.py
bin/genomic_distribution_2.py
bin/methyl_logo.py
bin/region_profile.py
bin/region_stat.py
bin/trichotmize.py
img/.DS_Store
img/beta.png
img/beta_profile.png
img/chromDist.CpG_perMb.png
img/chromDist.CpG_percent.png
img/chromDist.CpG_total.png
img/emails.png
img/gene_domain.jpg
img/gene_domain.png
img/genomic_dist1.png
img/methyl_logo.png
img/region_profile.png
img/trichotmize.png
lib/CpGtools.egg-info/PKG-INFO
lib/CpGtools.egg-info/SOURCES.txt
lib/CpGtools.egg-info/dependency_links.txt
lib/CpGtools.egg-info/not-zip-safe
lib/CpGtools.egg-info/requires.txt
lib/CpGtools.egg-info/top_level.txt
lib/cpgmodule/BED.py
lib/cpgmodule/MI.py
lib/cpgmodule/__init__.py
lib/cpgmodule/cgID.py
lib/cpgmodule/imotif.py
lib/cpgmodule/ireader.py
lib/cpgmodule/padjust.py
lib/cpgmodule/region2gene.py
lib/cpgmodule/utils.py
lib/cpgtools.egg-info/PKG-INFO
lib/cpgtools.egg-info/SOURCES.txt
lib/cpgtools.egg-info/dependency_links.txt
lib/cpgtools.egg-info/not-zip-safe
lib/cpgtools.egg-info/requires.txt
lib/cpgtools.egg-info/top_level.txt
test/hg19.RefSeq.union.1Kpromoter.bed.gz
test/hg19.RefSeq.union.bed.gz
test/hg19.chrom.sizes.gz
test/hg19_CGI.bed4.gz
test/hg19_H3K27ac_with_H3K4me1.bed4.gz
test/hg19_H3K27me3.bed4.gz
test/hg19_H3K4me3.bed4.gz
test/test.sh.gz
test/test_01.bed6.gz
test/test_02.bed6.gz
test/test_03.sh.gz
test/test_03a.bed3.gz
test/test_03b.bed3.gz
test/test_04_TwoGroup.grp.csv.gz
test/test_04_TwoGroup.tsv.gz
test/test_05_TwoGroup.grp.csv.gz
test/test_05_TwoGroup.tsv.gz
test/test_06_ThreeGroup.grp.csv.gz
test/test_06_ThreeGroup.tsv.gz
test/test_07_450K_CH.bed.gz
test/test_08.tsv.gz
test/test_09.grp.csv.gz
test/test_09.pval.txt.gz
test/test_09.tsv.gz
test/test_10_TwoGroup.grp.csv.gz
test/test_10_TwoGroup.tsv.gz