AUTHORS.rst
CONTRIBUTING.rst
HISTORY.rst
LICENSE
MANIFEST.in
README.rst
requirements_dev.txt
setup.cfg
setup.py
docs/Makefile
docs/authors.rst
docs/conf.py
docs/contributing.rst
docs/history.rst
docs/index.rst
docs/installation.rst
docs/make.bat
docs/readme.rst
docs/usage.rst
pydnameth/__init__.py
pydnameth.egg-info/PKG-INFO
pydnameth.egg-info/SOURCES.txt
pydnameth.egg-info/dependency_links.txt
pydnameth.egg-info/not-zip-safe
pydnameth.egg-info/requires.txt
pydnameth.egg-info/top_level.txt
pydnameth/config/__init__.py
pydnameth/config/common.py
pydnameth/config/config.py
pydnameth/config/annotations/__init__.py
pydnameth/config/annotations/annotations.py
pydnameth/config/annotations/conditions.py
pydnameth/config/annotations/subset.py
pydnameth/config/annotations/types.py
pydnameth/config/attributes/__init__.py
pydnameth/config/attributes/attributes.py
pydnameth/config/attributes/subset.py
pydnameth/config/data/__init__.py
pydnameth/config/data/data.py
pydnameth/config/data/types.py
pydnameth/config/experiment/__init__.py
pydnameth/config/experiment/experiment.py
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pydnameth/config/experiment/params.py
pydnameth/config/experiment/types.py
pydnameth/infrastucture/__init__.py
pydnameth/infrastucture/file_name.py
pydnameth/infrastucture/path.py
pydnameth/infrastucture/load/__init__.py
pydnameth/infrastucture/load/annotations.py
pydnameth/infrastucture/load/attributes.py
pydnameth/infrastucture/load/betas.py
pydnameth/infrastucture/load/betas_adj.py
pydnameth/infrastucture/load/betas_horvath_calculator.py
pydnameth/infrastucture/load/betas_spec.py
pydnameth/infrastucture/load/cells.py
pydnameth/infrastucture/load/entropy.py
pydnameth/infrastucture/load/epimutations.py
pydnameth/infrastucture/load/excluded.py
pydnameth/infrastucture/load/genes.py
pydnameth/infrastucture/load/residuals.py
pydnameth/infrastucture/load/table.py
pydnameth/infrastucture/save/__init__.py
pydnameth/infrastucture/save/figure.py
pydnameth/infrastucture/save/info.py
pydnameth/infrastucture/save/table.py
pydnameth/model/__init__.py
pydnameth/model/context.py
pydnameth/model/tree.py
pydnameth/model/strategy/__init__.py
pydnameth/model/strategy/get.py
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pydnameth/model/strategy/release.py
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pydnameth/model/strategy/save.py
pydnameth/model/strategy/setup.py
pydnameth/routines/__init__.py
pydnameth/routines/common.py
pydnameth/routines/clock/__init__.py
pydnameth/routines/clock/types.py
pydnameth/routines/clock/linreg/__init__.py
pydnameth/routines/clock/linreg/processing.py
pydnameth/routines/cluster/__init__.py
pydnameth/routines/cluster/functions.py
pydnameth/routines/linreg/__init__.py
pydnameth/routines/linreg/functions.py
pydnameth/routines/plot/__init__.py
pydnameth/routines/plot/functions/__init__.py
pydnameth/routines/plot/functions/layout.py
pydnameth/routines/plot/functions/range.py
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pydnameth/routines/polygon/__init__.py
pydnameth/routines/polygon/functions.py
pydnameth/routines/polygon/types.py
pydnameth/routines/variance/__init__.py
pydnameth/routines/variance/functions.py
pydnameth/routines/z_test_slope/__init__.py
pydnameth/routines/z_test_slope/functions.py
pydnameth/scripts/__init__.py
pydnameth/scripts/develop/__init__.py
pydnameth/scripts/develop/plot.py
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pydnameth/scripts/develop/betas/__init__.py
pydnameth/scripts/develop/betas/clock.py
pydnameth/scripts/develop/betas/plot.py
pydnameth/scripts/develop/betas/table.py
pydnameth/scripts/develop/betas_horvath_calculator/__init__.py
pydnameth/scripts/develop/betas_horvath_calculator/create.py
pydnameth/scripts/develop/betas_spec/__init__.py
pydnameth/scripts/develop/betas_spec/create.py
pydnameth/scripts/develop/cells/__init__.py
pydnameth/scripts/develop/cells/plot.py
pydnameth/scripts/develop/cells/table.py
pydnameth/scripts/develop/entropy/__init__.py
pydnameth/scripts/develop/entropy/plot.py
pydnameth/scripts/develop/entropy/table.py
pydnameth/scripts/develop/epimutations/__init__.py
pydnameth/scripts/develop/epimutations/load.py
pydnameth/scripts/develop/epimutations/plot.py
pydnameth/scripts/develop/epimutations/table.py
pydnameth/scripts/develop/genes/__init__.py
pydnameth/scripts/develop/genes/plot.py
pydnameth/scripts/develop/genes/table.py
pydnameth/scripts/develop/observables/__init__.py
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pydnameth/scripts/develop/residuals_common/plot.py
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pydnameth/scripts/release/__init__.py
tests/__init__.py
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tests/tear_down.py
tests/test.py
tests/fixtures/__init__.py
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