Metadata-Version: 2.1
Name: diagho-toolkit
Version: 0.1.0
Summary: Library with useful tools for processing genomic data
Author-email: Julien Lebunetel <julien.lebunetel@chu-rennes.fr>, Alexandre Cuffel <alexandre.cuffel@chu-rennes.fr>
Project-URL: Homepage, https://github.com/DiaghoProject/python-diagho-toolkit
Project-URL: Bug Tracker, https://github.com/DiaghoProject/python-diagho-toolkit/issues
Classifier: Programming Language :: Python :: 3
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: OS Independent
Requires-Python: >=3.9
Description-Content-Type: text/markdown
License-File: LICENSE

# Diagho Toolkit

## What is Diagho Toolkit ?

Diagho Toolkit is a python library which will read and parse a genomic file and return a generator with a pydantic model.

## What database is used ?

- OMIM
- HGNC
- HPO
- gnomAD
- gnomAD constraint
- VCF
- Fasta
- GFF3

## What pydantic model is returned ?

- Clinvar
- Feature
- Gene
- GnomAD
- GnomAD_constraint
- Pathology
- Region
- Sequence
- Symptom
- Variant
