Metadata-Version: 2.1
Name: mfeprimer-py3
Version: 0.1.2
Summary: UNKNOWN
Home-page: https://github.com/Ulises-Rosas/mfeprimer-py3
License: UNKNOWN
Description: # mfeprimer-py3
        
        Python3 version initiative for command line scripts of [MFEprimer-2.0](http://www.mfeprimer.com/)
        
        ## Installation
        
        Using pip:
        
        ```Shell
        pip install mfeprimer-py3
        ```
        
        Using `git` (optional):
        
        ```Shell
        git clone https://github.com/Ulises-Rosas/mfeprimer-py3.git
        cd mfeprimer-py3
        python3 setup.py install
        ```
        
        ## Usage
        
        ```Shell
        # Index the database
        IndexDb.py test/test.rna
        # Run MFEprimer
        MFEprimer.py -i test/p.fa -d test/test.rna
        ```
        
        Check original repo ([https://github.com/quwubin/MFEprimer-2.0](https://github.com/quwubin/MFEprimer-2.0)) for further details about features, outcomes and license agreement.
        
        
        ## Citations
        
        * Wubin Qu, Yang Zhou, Yanchun Zhang, Yiming Lu, Xiaolei Wang, Dongsheng Zhao, Yi Yang and Chenggang Zhang*. MFEprimer-2.0: A fast thermodynamics-based program for checking PCR primer specificity. Nucleic Acids Res. 2012 (accepted).
        
        * Wubin Qu, Zhiyong Shen, Dongsheng Zhao, Yi Yang and Chenggang Zhang. (2009) MFEprimer: multiple factor evaluation of the specificity of PCR primers, Bioinformatics, 25(2), 276-278.
        
        
        
        
Platform: UNKNOWN
Classifier: Programming Language :: Python :: 3
Description-Content-Type: text/markdown
