Metadata-Version: 2.1
Name: collective.fhirpath
Version: 0.2.0
Summary: Plone powered provider for fhirpath
Home-page: https://github.com/collective/collective.fhirpath
Author: Md Nazrul Islam
Author-email: email2nazru@gmail.com
License: GPL version 2
Project-URL: PyPI, https://pypi.python.org/pypi/collective.fhirpath
Project-URL: Source, https://github.com/collective/collective.fhirpath
Project-URL: Tracker, https://github.com/collective/collective.fhirpath/issues
Project-URL: Documentation, https://collective-fhirpath.readthedocs.io/en/latest/
Description: ============
        Introduction
        ============
        
        .. image:: https://img.shields.io/pypi/status/plone.app.fhirfield.svg
            :target: https://pypi.python.org/pypi/plone.app.fhirfield/
            :alt: Egg Status
        
        .. image:: https://img.shields.io/travis/nazrulworld/collective.fhirpath/master.svg
            :target: http://travis-ci.org/nazrulworld/collective.fhirpath
            :alt: Travis Build Status
        
        .. image:: https://coveralls.io/repos/github/nazrulworld/collective.fhirpath/badge.svg?branch=master
            :target: https://coveralls.io/github/nazrulworld/collective.fhirpath?branch=master
            :alt: Test Coverage
        
        .. image:: https://img.shields.io/pypi/pyversions/collective.fhirpath.svg
            :target: https://pypi.python.org/pypi/collective.fhirpath/
            :alt: Python Versions
        
        .. image:: https://img.shields.io/pypi/v/collective.fhirpath.svg
            :target: https://pypi.python.org/pypi/collective.fhirpath/
            :alt: Latest Version
        
        .. image:: https://img.shields.io/pypi/l/collective.fhirpath.svg
            :target: https://pypi.python.org/pypi/collective.fhirpath/
            :alt: License
        
        .. image:: https://img.shields.io/badge/code%20style-black-000000.svg
            :target: https://github.com/ambv/black
        
        
        
        `fhirpath`_ implementation in Plone, battery included, ready to use.
        
        
        Usages
        ------
        
        FHIR Search::
            >>> from fhirpath.enums import FHIR_VERSION
            >>> from fhirpath.interfaces import IElasticsearchEngineFactory
            >>> from fhirpath.interfaces import IFhirSearch
            >>> from fhirpath.interfaces import ISearchContextFactory
            >>> from plone import api
            >>> from collective.elasticsearch.es import ElasticSearchCatalog
            >>> from zope.component import queryMultiAdapter
        
            >>> es_catalog = ElasticSearchCatalog(api.portal.get_tool("portal_catalog"))
            >>> factory = queryMultiAdapter(
            ....        (es_catalog,), IElasticsearchEngineFactory
            .... )
            >>> engine = factory(fhir_version=FHIR_VERSION.STU3)
            >>> search_context = queryMultiAdapter((engine,), ISearchContextFactory)(
            .... resource_type, unrestricted=False)
            >>> search_factory = queryMultiAdapter((search_context,), IFhirSearch)
        
            >>> params = (
            ....        ("_profile", "http://hl7.org/fhir/Organization"),
            ....        ("identifier", "urn:oid:2.16.528.1|91654"),
            ....        ("type", "http://hl7.org/fhir/organization-type|prov"),
            ....        ("address-postalcode", "9100 AA"),
            ....        ("address", "Den Burg"),
            ....    )
            >>> bundle = search_factory(params)
            >>> len(bundle.entry)
            2
        
        
        FHIR Query::
        
            >>> from fhirpath.enums import FHIR_VERSION
            >>> from fhirpath.interfaces import IElasticsearchEngineFactory
            >>> from fhirpath.interfaces import IFhirSearch
            >>> from fhirpath.interfaces import ISearchContextFactory
            >>> from plone import api
            >>> from collective.elasticsearch.es import ElasticSearchCatalog
            >>> from zope.component import queryMultiAdapter
            >>> from fhirpath.query import Q_
            >>> from fhirpath.fql import T_
            >>> from fhirpath.fql import sort_
            >>> from fhirpath.enums import SortOrderType
        
            >>> es_catalog = ElasticSearchCatalog(api.portal.get_tool("portal_catalog"))
            >>> factory = queryMultiAdapter(
            ....        (es_catalog,), IElasticsearchEngineFactory
            .... )
            >>> engine = factory(fhir_version=FHIR_VERSION.STU3)
            >>> query_builder = Q_(resource="Organization", engine=engine)
            ....    query_builder = query_builder.where(
            ....        T_("Organization.meta.profile", "http://hl7.org/fhir/Organization")
            ....    ).sort(sort_("Organization.meta.lastUpdated", SortOrderType.DESC))
        
            >>> result = query_builder(async_result=False, unrestricted=True).fetchall()
            >>> result.header.total
            2
            >>> query_result = query_builder(async_result=False, unrestricted=True)
            >>> for resource in query_result:
            ....        count += 1
            ....        assert resource.__class__.__name__ == "OrganizationModel"
        
            >>> query_builder = Q_(resource="Organization", engine=engine)
            >>> query_builder = query_builder.where(T_("Organization.id", "f001"))
            >>> result_query = query_builder(async_result=False, unrestricted=True)
            >>> resource = result_query.single()
            >>> resource is not None
            True
        
            >>> query_builder = Q_(resource="Organization", engine=engine)
            >>> query_builder = query_builder.where(
            ....        T_("Organization.meta.profile", "http://hl7.org/fhir/Organization")
            ....    )
            >>> result_query = builder(async_result=False, unrestricted=True)
            >>> result = result_query.first()
            >>> isinstance(result, result_query._query.get_from()[0][1])
            True
        
        
        Documentation
        -------------
        
        Full documentation for end users can be found in the "docs" folder,
        and is also available online at https://collective-fhirpath.readthedocs.io/
        
        
        Installation
        ------------
        
        Install collective.fhirpath by adding it to your buildout::
        
            [buildout]
        
            ...
        
            eggs =
                collective.fhirpath
        
        
        and then running ``bin/buildout``
        
        
        Contribute
        ----------
        
        - Issue Tracker: https://github.com/collective/collective.fhirpath/issues
        - Source Code: https://github.com/collective/collective.fhirpath
        - Documentation: https://docs.plone.org/foo/bar
        
        
        Support
        -------
        
        If you are having issues, please let us know.
        We have a mailing list located at: project@example.com
        
        
        License
        -------
        
        The project is licensed under the GPLv2.
        
        .. _`elasticsearch`: https://www.elastic.co/products/elasticsearch
        .. _`fhirpath`: https://pypi.org/project/fhirpath/
        .. _`PostgreSQL`: https://www.postgresql.org/
        
        
        Contributors
        ============
        
        - Md Nazrul Islam, email2nazru@gmail.com
        
        
        Changelog
        =========
        
        
        0.2.0 (2019-09-16)
        ------------------
        
        - first working versions, with lots of improvements.
        
        
        0.1.0 (2019-09-06)
        ------------------
        
        - Initial release.
          [nazrulworld]
        
Keywords: Python Plone FHIR Healthcare HL7
Platform: UNKNOWN
Classifier: Environment :: Web Environment
Classifier: Development Status :: 3 - Alpha
Classifier: Framework :: Plone
Classifier: Framework :: Plone :: Addon
Classifier: Framework :: Plone :: 5.2
Classifier: Framework :: Plone :: 5.3
Classifier: Programming Language :: Python
Classifier: Programming Language :: Python :: 3.6
Classifier: Programming Language :: Python :: 3.7
Classifier: Programming Language :: Python :: 3.8
Classifier: Operating System :: OS Independent
Classifier: License :: OSI Approved :: GNU General Public License v2 (GPLv2)
Requires-Python: >=3.6
Provides-Extra: docs
Provides-Extra: test
