Metadata-Version: 2.1
Name: nat
Version: 0.4.3
Summary: Module to use the annotations created with NeuroCurator.
Home-page: https://github.com/BlueBrain/nat
Author: Christian O'Reilly, Pierre-Alexandre Fonta
Author-email: christian.oreilly@epfl.ch, pierre-alexandre.fonta@epfl.ch
License: GPLv3
Description: [Getting Started](#getting-started) |
        [Releases](#releases) |
        [Status](#status)
        
        # NeuroAnnotation Toolbox (NAT)
        
        Python module to use the annotations created with
        [NeuroCurator](https://github.com/BlueBrain/neurocurator), for example in a
        [Jupyter](https://jupyter.org/) notebook.
        
        This framework has been described in details in the following open-access
        paper: https://doi.org/10.3389/fninf.2017.00027.
        
        NAT provides the necessary functions and utilities to:
        - reliably annotate the neuroscientific literature,
        - curate published values for modeling parameters,
        - save them in reusable corpora.
        
        ---
        
        ## Getting Started
        
        **Requirements:**
        
        System side:
        
        - [Git 1.7.0+](https://git-scm.com/downloads)
        - [ImageMagick 6](http://docs.wand-py.org/en/latest/guide/install.html)
        
        Python side:
        
        - [Beautiful Soup 4](https://www.crummy.com/software/BeautifulSoup/)
        - [GitPython](https://gitpython.readthedocs.io)
        - [lxml](http://lxml.de)
        - [NumPy](http://www.numpy.org)
        - [pandas](https://pandas.pydata.org)
        - [parse](https://pypi.python.org/pypi/parse)
        - [Pyzotero](https://pyzotero.readthedocs.io)
        - [quantities](https://python-quantities.readthedocs.io)
        - [SciPy](https://www.scipy.org/scipylib/index.html)
        - [Wand](http://docs.wand-py.org)
        
        **Installation:**
        
        ```bash
        pip install nat
        ```
        
        ## Releases
        
        Versions and their notable changes are listed in the
        [releases section](https://github.com/BlueBrain/nat/releases/).
        
        Releases are synchronized with the ones of NeuroCurator.
        
        ## Status
        
        Created during 2016.
        
        Ongoing stabilization and reengineering in the branch _refactor-architecture_.
        
        The branch _refactor-architecture_ is **not** intended to be used by end-users.
        
        New features, bug fixes and improvements are done on the reengineered code sections.
        
        When a reengineered code section is stable, it's merged into the branch
        _master_ and a release is published.
        
Keywords: neuroscience annotation curation literature modeling parameters
Platform: UNKNOWN
Classifier: Development Status :: 3 - Alpha
Classifier: Intended Audience :: Science/Research
Classifier: Intended Audience :: Developers
Classifier: Topic :: Scientific/Engineering
Classifier: Topic :: Software Development :: Libraries :: Python Modules
Classifier: License :: OSI Approved :: GNU General Public License v3 (GPLv3)
Classifier: License :: Free for non-commercial use
Classifier: Programming Language :: Python :: 3 :: Only
Classifier: Operating System :: MacOS
Classifier: Operating System :: POSIX :: Linux
Classifier: Operating System :: Microsoft :: Windows
Classifier: Natural Language :: English
Requires-Python: >=3
Description-Content-Type: text/markdown
Provides-Extra: test
