MANIFEST.in
README.md
requirements.txt
setup.py
img_pipe/.DS_Store
img_pipe/__init__.py
img_pipe/__init__.pyc
img_pipe/dependencies.sh
img_pipe/img_pipe.py
img_pipe/img_pipe.pyc
img_pipe.egg-info/PKG-INFO
img_pipe.egg-info/SOURCES.txt
img_pipe.egg-info/dependency_links.txt
img_pipe.egg-info/requires.txt
img_pipe.egg-info/top_level.txt
img_pipe/SupplementalFiles/FS_colorLUT.py
img_pipe/SupplementalFiles/FS_colorLUT.pyc
img_pipe/SupplementalFiles/FreeSurferLUTRGBValues.npy
img_pipe/SupplementalFiles/FreeSurferLookupTable
img_pipe/SupplementalFiles/__init__.py
img_pipe/SupplementalFiles/__init__.pyc
img_pipe/SupplementalFiles/clingrid_inds.mat
img_pipe/SupplementalFiles/cvs_avg35_inMNI152_affine_subj.txt
img_pipe/SupplementalFiles/img_pipe_results.png
img_pipe/SupplementalFiles/workflow.png
img_pipe/SupplementalFiles/__pycache__/FS_colorLUT.cpython-35.pyc
img_pipe/SupplementalFiles/__pycache__/__init__.cpython-35.pyc
img_pipe/SupplementalScripts/.DS_Store
img_pipe/SupplementalScripts/__init__.py
img_pipe/SupplementalScripts/__init__.pyc
img_pipe/SupplementalScripts/acpc.py
img_pipe/SupplementalScripts/aseg2srf.sh
img_pipe/SupplementalScripts/electrode_picker.py
img_pipe/SupplementalScripts/__pycache__/electrode_picker.cpython-35.pyc
img_pipe/SupplementalScripts/icons/.DS_Store
img_pipe/SupplementalScripts/icons/leftbrain.png
img_pipe/SupplementalScripts/icons/leftbrain_blackbg.png
img_pipe/SupplementalScripts/icons/rightbrain_blackbg.png
img_pipe/__pycache__/__init__.cpython-35.pyc
img_pipe/__pycache__/__init__.cpython-36.pyc
img_pipe/__pycache__/img_pipe.cpython-35.pyc
img_pipe/__pycache__/img_pipe.cpython-36.pyc
img_pipe/plotting/__init__.py
img_pipe/plotting/__init__.pyc
img_pipe/plotting/ctmr_brain_plot.py
img_pipe/plotting/ctmr_brain_plot.pyc
img_pipe/plotting/ctmr_brain_plot_example.ipynb
img_pipe/plotting/ctmr_brain_plot_simple_example.ipynb
img_pipe/plotting/loc_colormap.mat
img_pipe/plotting/mlab_3D_to_2D.py
img_pipe/plotting/mlab_3D_to_2D.pyc
img_pipe/plotting/plot_brain.py
img_pipe/plotting/plot_brain.pyc
img_pipe/plotting/plot_recon_anatomy.py
img_pipe/plotting/__pycache__/__init__.cpython-35.pyc
img_pipe/plotting/__pycache__/ctmr_brain_plot.cpython-35.pyc
img_pipe/plotting/__pycache__/mlab_3D_to_2D.cpython-35.pyc
img_pipe/plotting/__pycache__/plot_brain.cpython-35.pyc
img_pipe/plotting/matlab/ctmr_gauss_plot.m
img_pipe/plotting/matlab/el_add.m
img_pipe/plotting/matlab/loc_view.m
img_pipe/plotting/matlab/plot_recon_anatomy.m
img_pipe/plotting/matlab/plot_recon_anatomy_compare_warped.m
img_pipe/plotting/matlab/tripatch.m
img_pipe/surface_warping_scripts/.DS_Store
img_pipe/surface_warping_scripts/__init__.py
img_pipe/surface_warping_scripts/__init__.pyc
img_pipe/surface_warping_scripts/make_outer_surf.py
img_pipe/surface_warping_scripts/make_outer_surf.pyc
img_pipe/surface_warping_scripts/project_electrodes_anydirection.py
img_pipe/surface_warping_scripts/project_electrodes_anydirection.pyc
tests/__init__.py
tests/tests.py
tutorials/img_pipe_plotting_demo.ipynb
tutorials/img_pipe_recon_demo.ipynb