LICENSE
README.md
pyproject.toml
setup.py
panospace/__init__.py
panospace.egg-info/PKG-INFO
panospace.egg-info/SOURCES.txt
panospace.egg-info/dependency_links.txt
panospace.egg-info/not-zip-safe
panospace.egg-info/requires.txt
panospace.egg-info/top_level.txt
panospace/_core/__init__.py
panospace/_core/annotation/RCTD.py
panospace/_core/annotation/__init__.py
panospace/_core/annotation/annotator.py
panospace/_core/annotation/cell2location.py
panospace/_core/annotation/endecon.py
panospace/_core/annotation/spatialDWLS.py
panospace/_core/annotation/superres.py
panospace/_core/annotation/_RCTD_backend/RCTD_utils.py
panospace/_core/annotation/_RCTD_backend/__init__.py
panospace/_core/annotation/_RCTD_backend/data_manager.py
panospace/_core/annotation/_annotator_backend/__init__.py
panospace/_core/annotation/_annotator_backend/annotator_utils.py
panospace/_core/annotation/_cell2location_backend/__init__.py
panospace/_core/annotation/_cell2location_backend/cell2location_utils.py
panospace/_core/annotation/_spatialDWLS_backend/__init__.py
panospace/_core/annotation/_spatialDWLS_backend/spatialDWLS_utils.py
panospace/_core/annotation/_superres_backend/__init__.py
panospace/_core/annotation/_superres_backend/superres_utils.py
panospace/_core/detection/__init__.py
panospace/_core/detection/cellvit.py
panospace/_core/detection/_cellvit_backend/__init__.py
panospace/_core/detection/_cellvit_backend/backbones.py
panospace/_core/detection/_cellvit_backend/blocks.py
panospace/_core/detection/_cellvit_backend/cache_models.py
panospace/_core/detection/_cellvit_backend/cellvit.py
panospace/_core/detection/_cellvit_backend/config.py
panospace/_core/detection/_cellvit_backend/download.py
panospace/_core/detection/_cellvit_backend/postprocessing.py
panospace/_core/detection/_cellvit_backend/sam_utils.py
panospace/_core/detection/_cellvit_backend/tools.py
panospace/_core/detection/_cellvit_backend/vision_transformer.py
panospace/_core/prediction/__init__.py
panospace/_core/prediction/predictor.py
panospace/_core/prediction/predictor_backend/predictor_utils.py
panospace/_utils/__init__.py
panospace/_utils/device_utils.py
panospace/_utils/utils.py
panospace/tl/__init__.py
panospace/tl/annotate.py
panospace/tl/detect.py
panospace/tl/microenv.py
panospace/tl/predict.py
scripts/smoke_test_superres.py
scripts/verify_install.py
try/2026_07_20260708-181842_visium_radius_init/analyze_radius_init.py
try/2026_07_20260708-182301_graph_diffusion_uninitialized/analyze_diffusion_effect.py
try/2026_07_20260708-184246_graph_diffusion_solutions/compare_hex_predictor_variants.py
try/2026_07_20260708-185944_graph_diffusion_weights_hex/analyze_hex_diffusion_weights.py
try/2026_07_20260708-194206_random_walk_mass_diffusion_hex/compare_random_walk_mass.py
try/2026_07_20260708-195039_spot_cell_bipartite_injection_hex/compare_bipartite_injection.py
try/2026_07_20260708-201223_predictor_small_tweaks_scale_free_hex/compare_small_tweaks_scale_free.py
try/2026_07_20260708-210607_minimal_diffusion_matrix_hex/compare_minimal_diffusion_matrix.py
try/2026_07_20260708-211634_minimal_diffusion_matrix_other_data/compare_minimal_diffusion_matrix_sq.py
try/2026_07_20260720-153304_zenodo-atherosclerosis-run/scripts/check_counts.py
try/2026_07_20260720-153304_zenodo-atherosclerosis-run/scripts/download_zenodo.py
try/2026_07_20260720-153304_zenodo-atherosclerosis-run/scripts/inspect_align.py
try/2026_07_20260720-153304_zenodo-atherosclerosis-run/scripts/inspect_data.py
try/2026_07_20260720-153304_zenodo-atherosclerosis-run/scripts/match_sample_image.py
try/2026_07_20260720-153304_zenodo-atherosclerosis-run/scripts/redraw_figures.py
try/2026_07_20260720-153304_zenodo-atherosclerosis-run/scripts/run_pipeline.py
try/2026_07_20260720-153304_zenodo-atherosclerosis-run/scripts/summarize_results.py
try/2026_07_20260720-195032_atheroma-fw104302-cellvit/scripts/redraw_figures.py
try/2026_07_20260720-195032_atheroma-fw104302-cellvit/scripts/run_pipeline.py
try/2026_07_20260720-195032_atheroma-fw104302-cellvit/scripts/summarize_results.py
try/2026_07_20260721-171552_cellvit-4slides-coverage/scripts/batch_detect_eval.py
try/2026_07_20260721-171552_cellvit-4slides-coverage/scripts/cellpose_detect.py
try/2026_07_20260725-221456_fw106022-cellvit-annotated-coverage/scripts/redraw_figures.py
try/2026_07_20260725-221456_fw106022-cellvit-annotated-coverage/scripts/run_pipeline.py
try/2026_07_20260725-221456_fw106022-cellvit-annotated-coverage/scripts/summarize_results.py
try/2026_07_20260728-124059_pipeline-fw106005_v2/scripts/redraw_figures.py
try/2026_07_20260728-124059_pipeline-fw106005_v2/scripts/run_pipeline.py
try/2026_07_20260728-124059_pipeline-fw106012/scripts/redraw_figures.py
try/2026_07_20260728-124059_pipeline-fw106012/scripts/run_pipeline.py
try/2026_07_20260728-124059_pipeline-fw106016/scripts/redraw_figures.py
try/2026_07_20260728-124059_pipeline-fw106016/scripts/run_pipeline.py
try/2026_08_20260802-165518_pipeline-xenium-breast-simspot/scripts/ab_tilesize.py
try/2026_08_20260802-165518_pipeline-xenium-breast-simspot/scripts/ab_tilesize_regression.py
try/2026_08_20260802-165518_pipeline-xenium-breast-simspot/scripts/diagnose_patchy.py
try/2026_08_20260802-165518_pipeline-xenium-breast-simspot/scripts/qc_figures.py
try/2026_08_20260802-165518_pipeline-xenium-breast-simspot/scripts/run_pipeline.py