Metadata-Version: 1.1
Name: microscopestitching
Version: 0.1.2
Summary: Automatic merge/stitching of regular spaced images
Home-page: https://github.com/arve0/microscopestitching
Author: Arve Seljebu
Author-email: arve.seljebu@gmail.com
License: MIT
Description: microscopestitching
        ===================
        
        |build-status-image| |pypi-version| |wheel|
        
        Overview
        --------
        
        This software aims to be a reliable way to stitch your microscope
        images. To get good results, a couple of assumptions should be true
        about your dataset:
        
        -  images are regular spaced
        -  images are of same size
        -  side by side images have translation only in one dimension
        -  (if not, check your scanning mirror rotation)
        -  scale in edge of images are constant
        
        Installation
        ------------
        
        Install using ``pip``...
        
        .. code:: bash
        
            pip install microscopestitching
        
        Example
        -------
        
        .. code:: python
        
            from microscopestitching import stitch
            from skimage.io import imsave
        
            images = []
            for i in range(50):
                row = i // 10
                col = i % 10
                images.append(('%d.png' % i, row, col))
        
            merged = stitch(images)
            imsave('merged.png', merged)
        
        See also `notebook
        examples <http://nbviewer.ipython.org/github/arve0/microscopestitching/blob/master/notebooks/>`__.
        
        API reference
        -------------
        
        API reference is at http://microscopestitching.rtfd.org.
        
        Development
        -----------
        
        Install dependencies and link development version of microscopestitching
        to pip:
        
        .. code:: bash
        
            git clone https://github.com/arve0/microscopestitching
            cd microscopestitching
            pip install -r requirements.txt # install dependencies and microscopestitching-package
        
        Testing
        ~~~~~~~
        
        .. code:: bash
        
            tox
        
        Build documentation locally
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~
        
        To build the documentation:
        
        .. code:: bash
        
            pip install -r docs/requirements.txt
            make docs
        
        .. |build-status-image| image:: https://secure.travis-ci.org/arve0/microscopestitching.png?branch=master
           :target: http://travis-ci.org/arve0/microscopestitching?branch=master
        .. |pypi-version| image:: https://pypip.in/version/microscopestitching/badge.svg
           :target: https://pypi.python.org/pypi/microscopestitching
        .. |wheel| image:: https://pypip.in/wheel/microscopestitching/badge.svg
           :target: https://pypi.python.org/pypi/microscopestitching
        
Keywords: microscopestitching
Platform: UNKNOWN
Classifier: Development Status :: 3 - Alpha
Classifier: Intended Audience :: Developers
Classifier: License :: OSI Approved :: MIT License
Classifier: Natural Language :: English
Classifier: Programming Language :: Python :: 2
Classifier: Programming Language :: Python :: 2.7
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.4
