Metadata-Version: 2.1
Name: cytobench
Version: 0.1.26
Summary: Benchmarking library for generative algorithms
Author-email: Nicolo' Lazzaro <nlazzaro@fbk.eu>
License: MIT License
        
        Copyright (c) 2024 Nicolo' Lazzaro
        
        Permission is hereby granted, free of charge, to any person obtaining a copy
        of this software and associated documentation files (the "Software"), to deal
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        The above copyright notice and this permission notice shall be included in all
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        THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
        IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
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Project-URL: Homepage, https://github.com/lazzaronico/cytobench
Keywords: benchmarking,generative algorithms,omics data
Classifier: Programming Language :: Python :: 3
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: OS Independent
Description-Content-Type: text/markdown
License-File: LICENSE
Requires-Dist: numpy==1.25.2
Requires-Dist: scipy==1.11.4
Requires-Dist: scikit-learn==1.2.2
Requires-Dist: python-igraph==0.11.6
Requires-Dist: leidenalg==0.10.2

# CytoBench
<img src="https://github.com/lazzaronico/cytobench/blob/main/logo.png" alt="CytoBench Logo" width="400"  align="left" style="margin-right: 10px;" />

Welcome to Cytobench, the friendliest benchmarking library in the village!

This repository is meant as a demo implementation of a scoring pipeline to evaluate generative models capabilities of recapitulating target empirical distributions via Pointwise Empirical Distance estimation, as presented in (paper_link). Most of the functionalities are presented in the Jupyter notebooks, which can be run interactively via Colab without having to create a local enviornment.

The code is not meant as a performant implementation, nor has it been protected by proper safety checks: do not use this in production environments!

You can install the latest version via pip:
```bash
pip install cytobench
```

If you use this library in your work please cite: (citation)
