LICENSE
MANIFEST.in
README.md
setup.py
src/_uncalled4.cpython-38-x86_64-linux-gnu.so
src/cpp/aln.hpp
src/cpp/config.cpp
src/cpp/config.hpp
src/cpp/dtw.cpp
src/cpp/dtw.hpp
src/cpp/event_detector.cpp
src/cpp/event_detector.hpp
src/cpp/eventalign.hpp
src/cpp/intervals.cpp
src/cpp/intervals.hpp
src/cpp/normalizer.cpp
src/cpp/normalizer.hpp
src/cpp/pore_model.cpp
src/cpp/pore_model.hpp
src/cpp/pybinder.cpp
src/cpp/read_buffer.cpp
src/cpp/read_buffer.hpp
src/cpp/seq.hpp
src/cpp/signal_processor.hpp
src/cpp/toplevel_prms.hpp
src/cpp/util.cpp
src/cpp/util.hpp
src/uncalled4/__about__.py
src/uncalled4/__init__.py
src/uncalled4/__main__.py
src/uncalled4/align.py
src/uncalled4/argparse.py
src/uncalled4/config.py
src/uncalled4/moves.py
src/uncalled4/params.py
src/uncalled4/pore_model.py
src/uncalled4/read_index.py
src/uncalled4/ref_index.py
src/uncalled4/signal_processor.py
src/uncalled4/tracks.py
src/uncalled4/train.py
src/uncalled4.egg-info/PKG-INFO
src/uncalled4.egg-info/SOURCES.txt
src/uncalled4.egg-info/dependency_links.txt
src/uncalled4.egg-info/entry_points.txt
src/uncalled4.egg-info/requires.txt
src/uncalled4.egg-info/top_level.txt
src/uncalled4/__pycache__/__about__.cpython-38.pyc
src/uncalled4/__pycache__/__init__.cpython-38.pyc
src/uncalled4/__pycache__/__main__.cpython-38.pyc
src/uncalled4/__pycache__/align.cpython-38.pyc
src/uncalled4/__pycache__/aln.cpython-38.pyc
src/uncalled4/__pycache__/aln_track.cpython-38.pyc
src/uncalled4/__pycache__/argparse.cpython-38.pyc
src/uncalled4/__pycache__/config.cpython-38.pyc
src/uncalled4/__pycache__/dtw.cpython-38.pyc
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src/uncalled4/__pycache__/signal_processor.cpython-38.pyc
src/uncalled4/__pycache__/tracks.cpython-38.pyc
src/uncalled4/__pycache__/train.cpython-38.pyc
src/uncalled4/io/__init__.py
src/uncalled4/io/bam.py
src/uncalled4/io/eventalign.py
src/uncalled4/io/m6anet.py
src/uncalled4/io/model_trainer.py
src/uncalled4/io/tombo.py
src/uncalled4/io/tsv.py
src/uncalled4/io/__pycache__/__init__.cpython-38.pyc
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src/uncalled4/io/__pycache__/guppy.cpython-38.pyc
src/uncalled4/io/__pycache__/m6anet.cpython-38.pyc
src/uncalled4/io/__pycache__/model.cpython-38.pyc
src/uncalled4/io/__pycache__/model_trainer.cpython-38.pyc
src/uncalled4/io/__pycache__/sqlite.cpython-38.pyc
src/uncalled4/io/__pycache__/tombo.cpython-38.pyc
src/uncalled4/io/__pycache__/tsv.cpython-38.pyc
src/uncalled4/models/README.txt
src/uncalled4/models/dna_r10.4.1_400bps_9mer.npz
src/uncalled4/models/dna_r9.4.1_400bps_6mer.npz
src/uncalled4/models/presets.tsv
src/uncalled4/models/rna_r9.4.1_70bps_5mer.npz
src/uncalled4/models/tombo/dna_r9.4.1_400bps_6mer.npz
src/uncalled4/models/tombo/rna_r9.4.1_70bps_5mer.npz
src/uncalled4/stats/__init__.py
src/uncalled4/stats/layerstats.py
src/uncalled4/stats/readstats.py
src/uncalled4/stats/refstats.py
src/uncalled4/stats/__pycache__/__init__.cpython-37.pyc
src/uncalled4/stats/__pycache__/__init__.cpython-38.pyc
src/uncalled4/stats/__pycache__/__init__.cpython-39.pyc
src/uncalled4/stats/__pycache__/_dtwstats.cpython-37.pyc
src/uncalled4/stats/__pycache__/_dtwstats.cpython-38.pyc
src/uncalled4/stats/__pycache__/_readstats.cpython-37.pyc
src/uncalled4/stats/__pycache__/_readstats.cpython-38.pyc
src/uncalled4/stats/__pycache__/_refstats.cpython-37.pyc
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src/uncalled4/stats/__pycache__/refstats.cpython-38.pyc
src/uncalled4/stats/__pycache__/refstats.cpython-39.pyc
src/uncalled4/vis/__init__.py
src/uncalled4/vis/browser.py
src/uncalled4/vis/dotplot.py
src/uncalled4/vis/refplot.py
src/uncalled4/vis/sigplot.py
src/uncalled4/vis/trackplot.py
src/uncalled4/vis/__pycache__/__init__.cpython-37.pyc
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src/uncalled4/vis/__pycache__/__init__.cpython-39.pyc
src/uncalled4/vis/__pycache__/browser.cpython-37.pyc
src/uncalled4/vis/__pycache__/browser.cpython-38.pyc
src/uncalled4/vis/__pycache__/browser.cpython-39.pyc
src/uncalled4/vis/__pycache__/dotplot.cpython-37.pyc
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src/uncalled4/vis/__pycache__/dotplot.cpython-39.pyc
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src/uncalled4/vis/__pycache__/sigplot.cpython-37.pyc
src/uncalled4/vis/__pycache__/sigplot.cpython-38.pyc
src/uncalled4/vis/__pycache__/sigplot.cpython-39.pyc
src/uncalled4/vis/__pycache__/trackplot.cpython-38.pyc
src/uncalled4/vis/__pycache__/trackplot.cpython-39.pyc
src/uncalled4/vis/assets/.browser.js.swp
src/uncalled4/vis/assets/browser.css
src/uncalled4/vis/assets/browser.js
test/test_module.py