Metadata-Version: 2.1
Name: ssrviz
Version: 1.0.0
Summary: Protein subfamily specific residue (SSR) detection and visualization toolbox
Home-page: http://phabi.de/
Author: Paul Zierep
Author-email: Paul.Zierep@googlemail.com
License: UNKNOWN
Platform: UNKNOWN
Description-Content-Type: text/markdown
Requires-Dist: biopython (>=1.70)
Requires-Dist: numpy (>=1.14.3)
Requires-Dist: scipy (>=1.1.0)
Requires-Dist: matplotlib (>=2.2.2)
Requires-Dist: natsort (>=5.3.0)
Requires-Dist: Gooey (==1.0.0)
Requires-Dist: pandas (>=0.21.0)

Abstract
=====================

Homologous proteins can be classified into protein families. The members of a family share a similar structure and sequence. Despite their inherent similarity, individual members of the same family can adopt very specific functions, leading to a further division into subfamilies. These functional differences can often be assigned to specific residues. This information can be used for various applications, such as function-based subfamily classification, rational site-directed mutagenesis and general elucidation of mechanisms of action. Here we introduce a novel user-friendly open-source software which allows for the identification and visualization of these residues.

Documentation
=====================

The documentation can be found in the repo: SSR-viz_doku.pdf

