click>=8.1.3
click-help-colors>=0.9.1
matplotlib>=3.5.3
numpy>=1.21.1
pandas>=1.3
pyfaidx>=0.7.1
pysam>=0.19.1
quicksect>=0.2.2
scipy>=1.7.0
tqdm>=4.64.1

[dev]
pytest>=7.0
pytest-cov>=4.0
black>=23.0
isort>=5.12
ruff>=0.1.0
mypy>=1.0
pre-commit>=3.0
build>=1.0
twine>=4.0

[docs]
sphinx>=6.0
sphinx-rtd-theme>=1.0
sphinx-click>=4.0
