LICENSE
README.md
setup.py
CompleteBin/Binning_steps.py
CompleteBin/IO.py
CompleteBin/__init__.py
CompleteBin/cli.py
CompleteBin/combine_cluster_derep.py
CompleteBin/logger.py
CompleteBin/version.py
CompleteBin/CallGenes/__init__.py
CompleteBin/CallGenes/gene_utils.py
CompleteBin/CallGenes/hmm_utils.py
CompleteBin/CallGenes/pfam.py
CompleteBin/Cluster/__init__.py
CompleteBin/Cluster/cluster.py
CompleteBin/Cluster/first_cluster.py
CompleteBin/Cluster/first_cluster_utils.py
CompleteBin/Cluster/k_means_v2.py
CompleteBin/Cluster/leiden_adaptive.py
CompleteBin/Cluster/polish_bin.py
CompleteBin/Cluster/polish_bin_improved.py
CompleteBin/Cluster/sec_cluster.py
CompleteBin/Cluster/sec_cluster_utils.py
CompleteBin/Cluster/split_utils.py
CompleteBin/DataProcess/__init__.py
CompleteBin/DataProcess/data_utils.py
CompleteBin/DataProcess/data_utils_fixed.py
CompleteBin/Dereplication/__init__.py
CompleteBin/Dereplication/contig_dedup.py
CompleteBin/Dereplication/galah_utils.py
CompleteBin/Dereplication/post_galah_dedup.py
CompleteBin/Model/__init__.py
CompleteBin/Model/layers.py
CompleteBin/Model/model.py
CompleteBin/Seqs/__init__.py
CompleteBin/Seqs/generate_seed.py
CompleteBin/Seqs/seq_info.py
CompleteBin/Seqs/seq_utils.py
CompleteBin/Trainer/__init__.py
CompleteBin/Trainer/arcface_plugin.py
CompleteBin/Trainer/dataset.py
CompleteBin/Trainer/debiased_loss.py
CompleteBin/Trainer/loss.py
CompleteBin/Trainer/optimized_debiased_loss.py
CompleteBin/Trainer/optimizer.py
CompleteBin/Trainer/sampler.py
CompleteBin/Trainer/ssmt_v2.py
CompleteBin/Trainer/trainer.py
CompleteBin/Trainer/warmup.py
CompleteBin/Utils/__init__.py
CompleteBin/Utils/pretrain_decision.py
completebin.egg-info/PKG-INFO
completebin.egg-info/SOURCES.txt
completebin.egg-info/dependency_links.txt
completebin.egg-info/entry_points.txt
completebin.egg-info/not-zip-safe
completebin.egg-info/requires.txt
completebin.egg-info/top_level.txt