csb	csb-module.html
csb.apps	csb.apps-module.html
csb.apps.bfit	csb.apps.bfit-module.html
csb.apps.bfit.main	csb.apps.bfit-module.html#main
csb.apps.bfite	csb.apps.bfite-module.html
csb.apps.bfite.main	csb.apps.bfite-module.html#main
csb.apps.buildhmm	csb.apps.buildhmm-module.html
csb.apps.buildhmm.main	csb.apps.buildhmm-module.html#main
csb.apps.csfrag	csb.apps.csfrag-module.html
csb.apps.csfrag._task	csb.apps.csfrag-module.html#_task
csb.apps.csfrag.main	csb.apps.csfrag-module.html#main
csb.apps.embd	csb.apps.embd-module.html
csb.apps.embd.main	csb.apps.embd-module.html#main
csb.apps.embd.sqrt	csb.apps.embd-module.html#sqrt
csb.apps.helloworld	csb.apps.helloworld-module.html
csb.apps.helloworld.main	csb.apps.helloworld-module.html#main
csb.apps.hhfrag	csb.apps.hhfrag-module.html
csb.apps.hhfrag.main	csb.apps.hhfrag-module.html#main
csb.apps.hhsearch	csb.apps.hhsearch-module.html
csb.apps.hhsearch._task	csb.apps.hhsearch-module.html#_task
csb.apps.hhsearch.main	csb.apps.hhsearch-module.html#main
csb.apps.precision	csb.apps.precision-module.html
csb.apps.precision.main	csb.apps.precision-module.html#main
csb.apps.precision.rmsd	csb.apps.precision-module.html#rmsd
csb.apps.promix	csb.apps.promix-module.html
csb.apps.promix.main	csb.apps.promix-module.html#main
csb.bio	csb.bio-module.html
csb.bio.fragments	csb.bio.fragments-module.html
csb.bio.fragments.RANDOM_RMSD	csb.bio.fragments-module.html#RANDOM_RMSD
csb.bio.fragments.rosetta	csb.bio.fragments.rosetta-module.html
csb.bio.hmm	csb.bio.hmm-module.html
csb.bio.hmm.RELATIVE_SA	csb.bio.hmm-module.html#RELATIVE_SA
csb.bio.hmm.BACKGROUND	csb.bio.hmm-module.html#BACKGROUND
csb.bio.hmm.pseudocounts	csb.bio.hmm.pseudocounts-module.html
csb.bio.hmm.pseudocounts.GONNET	csb.bio.hmm.pseudocounts-module.html#GONNET
csb.bio.io	csb.bio.io-module.html
csb.bio.io.StructureParser	csb.bio.io-module.html#StructureParser
csb.bio.io.clans	csb.bio.io.clans-module.html
csb.bio.io.cs	csb.bio.io.cs-module.html
csb.bio.io.dssp	csb.bio.io.dssp-module.html
csb.bio.io.dssp.get	csb.bio.io.dssp-module.html#get
csb.bio.io.fasta	csb.bio.io.fasta-module.html
csb.bio.io.hhpred	csb.bio.io.hhpred-module.html
csb.bio.io.mrc	csb.bio.io.mrc-module.html
csb.bio.io.noe	csb.bio.io.noe-module.html
csb.bio.io.procheck	csb.bio.io.procheck-module.html
csb.bio.io.psipred	csb.bio.io.psipred-module.html
csb.bio.io.svg	csb.bio.io.svg-module.html
csb.bio.io.vasco	csb.bio.io.vasco-module.html
csb.bio.io.whatif	csb.bio.io.whatif-module.html
csb.bio.io.wwpdb	csb.bio.io.wwpdb-module.html
csb.bio.io.wwpdb.StructureParser	csb.bio.io.wwpdb-module.html#StructureParser
csb.bio.io.wwpdb.find	csb.bio.io.wwpdb-module.html#find
csb.bio.io.wwpdb._parse_async	csb.bio.io.wwpdb-module.html#_parse_async
csb.bio.io.wwpdb.get	csb.bio.io.wwpdb-module.html#get
csb.bio.io.wwpdb.PDB_AMINOACIDS	csb.bio.io.wwpdb-module.html#PDB_AMINOACIDS
csb.bio.io.wwpdb.PDB_NUCLEOTIDES	csb.bio.io.wwpdb-module.html#PDB_NUCLEOTIDES
csb.bio.nmr	csb.bio.nmr-module.html
csb.bio.sequence	csb.bio.sequence-module.html
csb.bio.sequence.alignment	csb.bio.sequence.alignment-module.html
csb.bio.structure	csb.bio.structure-module.html
csb.bio.utils	csb.bio.utils-module.html
csb.bio.utils.wrmsd	csb.bio.utils-module.html#wrmsd
csb.bio.utils.rad	csb.bio.utils-module.html#rad
csb.bio.utils.probabilistic_fit	csb.bio.utils-module.html#probabilistic_fit
csb.bio.utils.tm_score	csb.bio.utils-module.html#tm_score
csb.bio.utils.radius_of_gyration	csb.bio.utils-module.html#radius_of_gyration
csb.bio.utils.second_moments	csb.bio.utils-module.html#second_moments
csb.bio.utils.inertia_tensor	csb.bio.utils-module.html#inertia_tensor
csb.bio.utils.scale_and_fit	csb.bio.utils-module.html#scale_and_fit
csb.bio.utils.tm_superimpose	csb.bio.utils-module.html#tm_superimpose
csb.bio.utils.fit	csb.bio.utils-module.html#fit
csb.bio.utils.torsion_rmsd	csb.bio.utils-module.html#torsion_rmsd
csb.bio.utils.transform	csb.bio.utils-module.html#transform
csb.bio.utils.average_structure	csb.bio.utils-module.html#average_structure
csb.bio.utils.find_pairs	csb.bio.utils-module.html#find_pairs
csb.bio.utils.center_of_mass	csb.bio.utils-module.html#center_of_mass
csb.bio.utils.rmsd_cur	csb.bio.utils-module.html#rmsd_cur
csb.bio.utils.bfit	csb.bio.utils-module.html#bfit
csb.bio.utils.is_mirror_image	csb.bio.utils-module.html#is_mirror_image
csb.bio.utils.wfit	csb.bio.utils-module.html#wfit
csb.bio.utils.xfit	csb.bio.utils-module.html#xfit
csb.bio.utils.distance_matrix	csb.bio.utils-module.html#distance_matrix
csb.bio.utils.distance	csb.bio.utils-module.html#distance
csb.bio.utils.rmsd	csb.bio.utils-module.html#rmsd
csb.bio.utils.distance_sq	csb.bio.utils-module.html#distance_sq
csb.bio.utils._tm_d0	csb.bio.utils-module.html#_tm_d0
csb.bio.utils.fit_wellordered	csb.bio.utils-module.html#fit_wellordered
csb.bio.utils.fit_transform	csb.bio.utils-module.html#fit_transform
csb.bio.utils.deg	csb.bio.utils-module.html#deg
csb.build	csb.build-module.html
csb.build.main	csb.build-module.html#main
csb.build.ROOT	csb.build-module.html#ROOT
csb.build.PARENT	csb.build-module.html#PARENT
csb.build.SOURCETREE	csb.build-module.html#SOURCETREE
csb.core	csb.core-module.html
csb.core.singleton	csb.core-module.html#singleton
csb.core.iterable	csb.core-module.html#iterable
csb.core.metaclass	csb.core-module.html#metaclass
csb.core.deepcopy	csb.core-module.html#deepcopy
csb.core._deserialize_enum	csb.core-module.html#_deserialize_enum
csb.io	csb.io-module.html
csb.io.load	csb.io-module.html#load
csb.io.dump	csb.io-module.html#dump
csb.io.NEWLINE	csb.io-module.html#NEWLINE
csb.io.plots	csb.io.plots-module.html
csb.io.tsv	csb.io.tsv-module.html
csb.numeric	csb.numeric-module.html
csb.numeric.trim	csb.numeric-module.html#trim
csb.numeric.euler_angles	csb.numeric-module.html#euler_angles
csb.numeric.rotation_matrix	csb.numeric-module.html#rotation_matrix
csb.numeric.sign	csb.numeric-module.html#sign
csb.numeric.log_midpoint_rule_2d	csb.numeric-module.html#log_midpoint_rule_2d
csb.numeric.from_polar	csb.numeric-module.html#from_polar
csb.numeric.d_approx_psi	csb.numeric-module.html#d_approx_psi
csb.numeric.psi	csb.numeric-module.html#psi
csb.numeric.trapezoidal_2d	csb.numeric-module.html#trapezoidal_2d
csb.numeric.from_polar3d	csb.numeric-module.html#from_polar3d
csb.numeric.degree2radian	csb.numeric-module.html#degree2radian
csb.numeric.radian2degree	csb.numeric-module.html#radian2degree
csb.numeric.simpson_2d	csb.numeric-module.html#simpson_2d
csb.numeric.EULER_MASCHERONI	csb.numeric-module.html#EULER_MASCHERONI
csb.numeric.dihedral_angle	csb.numeric-module.html#dihedral_angle
csb.numeric.log_trapezoidal_2d	csb.numeric-module.html#log_trapezoidal_2d
csb.numeric.pad	csb.numeric-module.html#pad
csb.numeric.gower_matrix	csb.numeric-module.html#gower_matrix
csb.numeric.trapezoidal	csb.numeric-module.html#trapezoidal
csb.numeric.inv_psi	csb.numeric-module.html#inv_psi
csb.numeric.euler	csb.numeric-module.html#euler
csb.numeric.polar	csb.numeric-module.html#polar
csb.numeric.axis_and_angle	csb.numeric-module.html#axis_and_angle
csb.numeric.norm	csb.numeric-module.html#norm
csb.numeric.EXP_MAX	csb.numeric-module.html#EXP_MAX
csb.numeric.zerofill	csb.numeric-module.html#zerofill
csb.numeric.log	csb.numeric-module.html#log
csb.numeric.approx_psi	csb.numeric-module.html#approx_psi
csb.numeric.polar3d	csb.numeric-module.html#polar3d
csb.numeric.LOG_MAX	csb.numeric-module.html#LOG_MAX
csb.numeric.EXP_MIN	csb.numeric-module.html#EXP_MIN
csb.numeric.reverse	csb.numeric-module.html#reverse
csb.numeric.correlate	csb.numeric-module.html#correlate
csb.numeric.LOG_MIN	csb.numeric-module.html#LOG_MIN
csb.numeric.log_sum_exp	csb.numeric-module.html#log_sum_exp
csb.numeric.convolve	csb.numeric-module.html#convolve
csb.numeric.log_sum_exp_accumulate	csb.numeric-module.html#log_sum_exp_accumulate
csb.numeric.exp	csb.numeric-module.html#exp
csb.numeric.log_trapezoidal	csb.numeric-module.html#log_trapezoidal
csb.numeric.isreal	csb.numeric-module.html#isreal
csb.numeric.integrators	csb.numeric.integrators-module.html
csb.statistics	csb.statistics-module.html
csb.statistics.circmean	csb.statistics-module.html#circmean
csb.statistics.principal_coordinates	csb.statistics-module.html#principal_coordinates
csb.statistics.entropy	csb.statistics-module.html#entropy
csb.statistics.geometric_mean	csb.statistics-module.html#geometric_mean
csb.statistics.probabilistic_or	csb.statistics-module.html#probabilistic_or
csb.statistics.density	csb.statistics-module.html#density
csb.statistics.probabilistic_xor	csb.statistics-module.html#probabilistic_xor
csb.statistics.histogram_nd	csb.statistics-module.html#histogram_nd
csb.statistics.running_average	csb.statistics-module.html#running_average
csb.statistics.skewness	csb.statistics-module.html#skewness
csb.statistics.harmonic_mean	csb.statistics-module.html#harmonic_mean
csb.statistics.weighted_median	csb.statistics-module.html#weighted_median
csb.statistics.kurtosis	csb.statistics-module.html#kurtosis
csb.statistics.histogram2D	csb.statistics-module.html#histogram2D
csb.statistics.probabilistic_and	csb.statistics-module.html#probabilistic_and
csb.statistics.autocorrelation	csb.statistics-module.html#autocorrelation
csb.statistics.circvar	csb.statistics-module.html#circvar
csb.statistics.ars	csb.statistics.ars-module.html
csb.statistics.ars.log	csb.statistics.ars-module.html#log
csb.statistics.ars.exp	csb.statistics.ars-module.html#exp
csb.statistics.maxent	csb.statistics.maxent-module.html
csb.statistics.mixtures	csb.statistics.mixtures-module.html
csb.statistics.pdf	csb.statistics.pdf-module.html
csb.statistics.pdf.EULER_MASCHERONI	csb.statistics.pdf-module.html#EULER_MASCHERONI
csb.statistics.pdf.fabs	csb.statistics.pdf-module.html#fabs
csb.statistics.pdf.gammaln	csb.statistics.pdf-module.html#gammaln
csb.statistics.pdf.power	csb.statistics.pdf-module.html#power
csb.statistics.pdf.sqrt	csb.statistics.pdf-module.html#sqrt
csb.statistics.pdf.pi	csb.statistics.pdf-module.html#pi
csb.statistics.pdf.parameterized	csb.statistics.pdf.parameterized-module.html
csb.statistics.rand	csb.statistics.rand-module.html
csb.statistics.rand.truncated_gamma	csb.statistics.rand-module.html#truncated_gamma
csb.statistics.rand.random_rotation	csb.statistics.rand-module.html#random_rotation
csb.statistics.rand.sample_sphere3d	csb.statistics.rand-module.html#sample_sphere3d
csb.statistics.rand.probability_transform	csb.statistics.rand-module.html#probability_transform
csb.statistics.rand.inv_gaussian	csb.statistics.rand-module.html#inv_gaussian
csb.statistics.rand.truncated_normal	csb.statistics.rand-module.html#truncated_normal
csb.statistics.rand.gen_inv_gaussian	csb.statistics.rand-module.html#gen_inv_gaussian
csb.statistics.rand.sample_dirichlet	csb.statistics.rand-module.html#sample_dirichlet
csb.statistics.rand.sample_from_histogram	csb.statistics.rand-module.html#sample_from_histogram
csb.statistics.samplers	csb.statistics.samplers-module.html
csb.statistics.samplers.mc	csb.statistics.samplers.mc-module.html
csb.statistics.samplers.mc.augment_state	csb.statistics.samplers.mc-module.html#augment_state
csb.statistics.samplers.mc.multichain	csb.statistics.samplers.mc.multichain-module.html
csb.statistics.samplers.mc.neqsteppropagator	csb.statistics.samplers.mc.neqsteppropagator-module.html
csb.statistics.samplers.mc.propagators	csb.statistics.samplers.mc.propagators-module.html
csb.statistics.samplers.mc.singlechain	csb.statistics.samplers.mc.singlechain-module.html
csb.statistics.scalemixture	csb.statistics.scalemixture-module.html
csb.statistics.scalemixture.inv_digamma_minus_log	csb.statistics.scalemixture-module.html#inv_digamma_minus_log
csb.statistics.scalemixture.psi	csb.statistics.scalemixture-module.html#psi
csb.statistics.scalemixture.kve	csb.statistics.scalemixture-module.html#kve
csb.statmech	csb.statmech-module.html
csb.statmech.ensembles	csb.statmech.ensembles-module.html
csb.statmech.wham	csb.statmech.wham-module.html
csb.test	csb.test-module.html
csb.test.skip	csb.test-module.html#skip
csb.test.functional	csb.test-module.html#functional
csb.test.custom	csb.test-module.html#custom
csb.test.regression	csb.test-module.html#regression
csb.test.unit	csb.test-module.html#unit
csb.test.app	csb.test.app-module.html
abc.ABCMeta	abc.ABCMeta-class.html
abc.ABCMeta.__new__	abc.ABCMeta-class.html#__new__
abc.ABCMeta._abc_invalidation_counter	abc.ABCMeta-class.html#_abc_invalidation_counter
abc.ABCMeta.__instancecheck__	abc.ABCMeta-class.html#__instancecheck__
abc.ABCMeta.__subclasscheck__	abc.ABCMeta-class.html#__subclasscheck__
abc.ABCMeta.register	abc.ABCMeta-class.html#register
abc.ABCMeta._dump_registry	abc.ABCMeta-class.html#_dump_registry
csb.Version	csb.Version-class.html
csb.Version.major	csb.Version-class.html#major
csb.Version.short	csb.Version-class.html#short
csb.Version.package	csb.Version-class.html#package
csb.Version.__str__	csb.Version-class.html#__str__
csb.Version.micro	csb.Version-class.html#micro
csb.Version.full	csb.Version-class.html#full
csb.Version.__repr__	csb.Version-class.html#__repr__
csb.Version.minor	csb.Version-class.html#minor
csb.Version.__init__	csb.Version-class.html#__init__
csb.Version.revision	csb.Version-class.html#revision
csb.apps.AppExit	csb.apps.AppExit-class.html
csb.apps.AppExit.__init__	csb.apps.AppExit-class.html#__init__
csb.apps.AppRunner	csb.apps.AppRunner-class.html
csb.apps.AppRunner.__metaclass__	abc.ABCMeta-class.html
csb.apps.AppRunner._abc_negative_cache	csb.apps.AppRunner-class.html#_abc_negative_cache
csb.apps.AppRunner.module	csb.apps.AppRunner-class.html#module
csb.apps.AppRunner.__init__	csb.apps.AppRunner-class.html#__init__
csb.apps.AppRunner._abc_cache	csb.apps.AppRunner-class.html#_abc_cache
csb.apps.AppRunner.__abstractmethods__	csb.apps.AppRunner-class.html#__abstractmethods__
csb.apps.AppRunner.command_line	csb.apps.AppRunner-class.html#command_line
csb.apps.AppRunner.program	csb.apps.AppRunner-class.html#program
csb.apps.AppRunner.exit	csb.apps.AppRunner-class.html#exit
csb.apps.AppRunner.run	csb.apps.AppRunner-class.html#run
csb.apps.AppRunner.args	csb.apps.AppRunner-class.html#args
csb.apps.AppRunner.initapp	csb.apps.AppRunner-class.html#initapp
csb.apps.AppRunner.target	csb.apps.AppRunner-class.html#target
csb.apps.AppRunner._abc_negative_cache_version	csb.apps.AppRunner-class.html#_abc_negative_cache_version
csb.apps.AppRunner._abc_registry	csb.apps.AppRunner-class.html#_abc_registry
csb.apps.Application	csb.apps.Application-class.html
csb.apps.Application.__metaclass__	abc.ABCMeta-class.html
csb.apps.Application._abc_negative_cache	csb.apps.Application-class.html#_abc_negative_cache
csb.apps.Application.__init__	csb.apps.Application-class.html#__init__
csb.apps.Application._abc_cache	csb.apps.Application-class.html#_abc_cache
csb.apps.Application.log	csb.apps.Application-class.html#log
csb.apps.Application.__abstractmethods__	csb.apps.Application-class.html#__abstractmethods__
csb.apps.Application.exit	csb.apps.Application-class.html#exit
csb.apps.Application.main	csb.apps.Application-class.html#main
csb.apps.Application.args	csb.apps.Application-class.html#args
csb.apps.Application._abc_negative_cache_version	csb.apps.Application-class.html#_abc_negative_cache_version
csb.apps.Application._abc_registry	csb.apps.Application-class.html#_abc_registry
csb.apps.ArgHandler	csb.apps.ArgHandler-class.html
csb.apps.ArgHandler.help	csb.apps.ArgHandler-class.html#help
csb.apps.ArgHandler.parser	csb.apps.ArgHandler-class.html#parser
csb.apps.ArgHandler._add	csb.apps.ArgHandler-class.html#_add
csb.apps.ArgHandler.add_positional_argument	csb.apps.ArgHandler-class.html#add_positional_argument
csb.apps.ArgHandler.Type	csb.apps.ArgHandler.Type-class.html
csb.apps.ArgHandler.__init__	csb.apps.ArgHandler-class.html#__init__
csb.apps.ArgHandler.usage	csb.apps.ArgHandler-class.html#usage
csb.apps.ArgHandler.add_array_argument	csb.apps.ArgHandler-class.html#add_array_argument
csb.apps.ArgHandler.add_scalar_option	csb.apps.ArgHandler-class.html#add_scalar_option
csb.apps.ArgHandler._format_help	csb.apps.ArgHandler-class.html#_format_help
csb.apps.ArgHandler.parse	csb.apps.ArgHandler-class.html#parse
csb.apps.ArgHandler.SHORT_PREFIX	csb.apps.ArgHandler-class.html#SHORT_PREFIX
csb.apps.ArgHandler.add_boolean_option	csb.apps.ArgHandler-class.html#add_boolean_option
csb.apps.ArgHandler.add_array_option	csb.apps.ArgHandler-class.html#add_array_option
csb.apps.ArgHandler.LONG_PREFIX	csb.apps.ArgHandler-class.html#LONG_PREFIX
csb.apps.ArgHandler.Type	csb.apps.ArgHandler.Type-class.html
csb.apps.ArgHandler.Type.NAMED	csb.apps.ArgHandler.Type-class.html#NAMED
csb.apps.ArgHandler.Type.POSITIONAL	csb.apps.ArgHandler.Type-class.html#POSITIONAL
csb.apps.ExitCodes	csb.apps.ExitCodes-class.html
csb.apps.ExitCodes.CRASH	csb.apps.ExitCodes-class.html#CRASH
csb.apps.ExitCodes.USAGE_ERROR	csb.apps.ExitCodes-class.html#USAGE_ERROR
csb.apps.ExitCodes.CLEAN	csb.apps.ExitCodes-class.html#CLEAN
csb.apps.bfit.AppRunner	csb.apps.bfit.AppRunner-class.html
csb.apps.AppRunner.__metaclass__	abc.ABCMeta-class.html
csb.apps.AppRunner._abc_negative_cache	csb.apps.AppRunner-class.html#_abc_negative_cache
csb.apps.AppRunner.module	csb.apps.AppRunner-class.html#module
csb.apps.AppRunner.__init__	csb.apps.AppRunner-class.html#__init__
csb.apps.AppRunner._abc_cache	csb.apps.AppRunner-class.html#_abc_cache
csb.apps.bfit.AppRunner.__abstractmethods__	csb.apps.bfit.AppRunner-class.html#__abstractmethods__
csb.apps.bfit.AppRunner.command_line	csb.apps.bfit.AppRunner-class.html#command_line
csb.apps.AppRunner.program	csb.apps.AppRunner-class.html#program
csb.apps.AppRunner.exit	csb.apps.AppRunner-class.html#exit
csb.apps.AppRunner.run	csb.apps.AppRunner-class.html#run
csb.apps.AppRunner.args	csb.apps.AppRunner-class.html#args
csb.apps.AppRunner.initapp	csb.apps.AppRunner-class.html#initapp
csb.apps.bfit.AppRunner.target	csb.apps.bfit.AppRunner-class.html#target
csb.apps.AppRunner._abc_negative_cache_version	csb.apps.AppRunner-class.html#_abc_negative_cache_version
csb.apps.AppRunner._abc_registry	csb.apps.AppRunner-class.html#_abc_registry
csb.apps.bfit.BFitApp	csb.apps.bfit.BFitApp-class.html
csb.apps.Application.__metaclass__	abc.ABCMeta-class.html
csb.apps.Application._abc_negative_cache	csb.apps.Application-class.html#_abc_negative_cache
csb.apps.Application.__init__	csb.apps.Application-class.html#__init__
csb.apps.Application._abc_cache	csb.apps.Application-class.html#_abc_cache
csb.apps.Application.log	csb.apps.Application-class.html#log
csb.apps.bfit.BFitApp.__abstractmethods__	csb.apps.bfit.BFitApp-class.html#__abstractmethods__
csb.apps.Application.exit	csb.apps.Application-class.html#exit
csb.apps.bfit.BFitApp.main	csb.apps.bfit.BFitApp-class.html#main
csb.apps.Application.args	csb.apps.Application-class.html#args
csb.apps.Application._abc_negative_cache_version	csb.apps.Application-class.html#_abc_negative_cache_version
csb.apps.Application._abc_registry	csb.apps.Application-class.html#_abc_registry
csb.apps.bfit.ExitCodes	csb.apps.bfit.ExitCodes-class.html
csb.apps.ExitCodes.CRASH	csb.apps.ExitCodes-class.html#CRASH
csb.apps.bfit.ExitCodes.IO_ERROR	csb.apps.bfit.ExitCodes-class.html#IO_ERROR
csb.apps.ExitCodes.USAGE_ERROR	csb.apps.ExitCodes-class.html#USAGE_ERROR
csb.apps.ExitCodes.CLEAN	csb.apps.ExitCodes-class.html#CLEAN
csb.apps.bfit.ExitCodes.INPUT_ERROR	csb.apps.bfit.ExitCodes-class.html#INPUT_ERROR
csb.apps.bfite.AppRunner	csb.apps.bfite.AppRunner-class.html
csb.apps.AppRunner.__metaclass__	abc.ABCMeta-class.html
csb.apps.AppRunner._abc_negative_cache	csb.apps.AppRunner-class.html#_abc_negative_cache
csb.apps.AppRunner.module	csb.apps.AppRunner-class.html#module
csb.apps.AppRunner.__init__	csb.apps.AppRunner-class.html#__init__
csb.apps.AppRunner._abc_cache	csb.apps.AppRunner-class.html#_abc_cache
csb.apps.bfite.AppRunner.__abstractmethods__	csb.apps.bfite.AppRunner-class.html#__abstractmethods__
csb.apps.bfite.AppRunner.command_line	csb.apps.bfite.AppRunner-class.html#command_line
csb.apps.AppRunner.program	csb.apps.AppRunner-class.html#program
csb.apps.AppRunner.exit	csb.apps.AppRunner-class.html#exit
csb.apps.AppRunner.run	csb.apps.AppRunner-class.html#run
csb.apps.AppRunner.args	csb.apps.AppRunner-class.html#args
csb.apps.AppRunner.initapp	csb.apps.AppRunner-class.html#initapp
csb.apps.bfite.AppRunner.target	csb.apps.bfite.AppRunner-class.html#target
csb.apps.AppRunner._abc_negative_cache_version	csb.apps.AppRunner-class.html#_abc_negative_cache_version
csb.apps.AppRunner._abc_registry	csb.apps.AppRunner-class.html#_abc_registry
csb.apps.bfite.BFitApp	csb.apps.bfite.BFitApp-class.html
csb.apps.Application.__metaclass__	abc.ABCMeta-class.html
csb.apps.Application._abc_negative_cache	csb.apps.Application-class.html#_abc_negative_cache
csb.apps.Application.__init__	csb.apps.Application-class.html#__init__
csb.apps.Application._abc_cache	csb.apps.Application-class.html#_abc_cache
csb.apps.Application.log	csb.apps.Application-class.html#log
csb.apps.bfite.BFitApp.__abstractmethods__	csb.apps.bfite.BFitApp-class.html#__abstractmethods__
csb.apps.Application.exit	csb.apps.Application-class.html#exit
csb.apps.bfite.BFitApp.main	csb.apps.bfite.BFitApp-class.html#main
csb.apps.Application.args	csb.apps.Application-class.html#args
csb.apps.Application._abc_negative_cache_version	csb.apps.Application-class.html#_abc_negative_cache_version
csb.apps.Application._abc_registry	csb.apps.Application-class.html#_abc_registry
csb.apps.bfite.ExitCodes	csb.apps.bfite.ExitCodes-class.html
csb.apps.ExitCodes.CRASH	csb.apps.ExitCodes-class.html#CRASH
csb.apps.bfite.ExitCodes.IO_ERROR	csb.apps.bfite.ExitCodes-class.html#IO_ERROR
csb.apps.ExitCodes.USAGE_ERROR	csb.apps.ExitCodes-class.html#USAGE_ERROR
csb.apps.ExitCodes.CLEAN	csb.apps.ExitCodes-class.html#CLEAN
csb.apps.buildhmm.AppRunner	csb.apps.buildhmm.AppRunner-class.html
csb.apps.AppRunner.__metaclass__	abc.ABCMeta-class.html
csb.apps.AppRunner._abc_negative_cache	csb.apps.AppRunner-class.html#_abc_negative_cache
csb.apps.AppRunner.module	csb.apps.AppRunner-class.html#module
csb.apps.AppRunner.__init__	csb.apps.AppRunner-class.html#__init__
csb.apps.AppRunner._abc_cache	csb.apps.AppRunner-class.html#_abc_cache
csb.apps.buildhmm.AppRunner.__abstractmethods__	csb.apps.buildhmm.AppRunner-class.html#__abstractmethods__
csb.apps.buildhmm.AppRunner.command_line	csb.apps.buildhmm.AppRunner-class.html#command_line
csb.apps.AppRunner.program	csb.apps.AppRunner-class.html#program
csb.apps.AppRunner.exit	csb.apps.AppRunner-class.html#exit
csb.apps.AppRunner.run	csb.apps.AppRunner-class.html#run
csb.apps.AppRunner.args	csb.apps.AppRunner-class.html#args
csb.apps.AppRunner.initapp	csb.apps.AppRunner-class.html#initapp
csb.apps.buildhmm.AppRunner.target	csb.apps.buildhmm.AppRunner-class.html#target
csb.apps.AppRunner._abc_negative_cache_version	csb.apps.AppRunner-class.html#_abc_negative_cache_version
csb.apps.AppRunner._abc_registry	csb.apps.AppRunner-class.html#_abc_registry
csb.apps.buildhmm.BuildArgError	csb.apps.buildhmm.BuildArgError-class.html
csb.apps.buildhmm.BuildError	csb.apps.buildhmm.BuildError-class.html
csb.apps.buildhmm.BuildIOError	csb.apps.buildhmm.BuildIOError-class.html
csb.apps.buildhmm.BuildProfileApp	csb.apps.buildhmm.BuildProfileApp-class.html
csb.apps.Application.__metaclass__	abc.ABCMeta-class.html
csb.apps.Application._abc_negative_cache	csb.apps.Application-class.html#_abc_negative_cache
csb.apps.Application.__init__	csb.apps.Application-class.html#__init__
csb.apps.Application._abc_cache	csb.apps.Application-class.html#_abc_cache
csb.apps.Application.log	csb.apps.Application-class.html#log
csb.apps.buildhmm.BuildProfileApp.__abstractmethods__	csb.apps.buildhmm.BuildProfileApp-class.html#__abstractmethods__
csb.apps.Application.exit	csb.apps.Application-class.html#exit
csb.apps.buildhmm.BuildProfileApp.main	csb.apps.buildhmm.BuildProfileApp-class.html#main
csb.apps.Application.args	csb.apps.Application-class.html#args
csb.apps.Application._abc_negative_cache_version	csb.apps.Application-class.html#_abc_negative_cache_version
csb.apps.Application._abc_registry	csb.apps.Application-class.html#_abc_registry
csb.apps.buildhmm.ExitCodes	csb.apps.buildhmm.ExitCodes-class.html
csb.apps.ExitCodes.CRASH	csb.apps.ExitCodes-class.html#CRASH
csb.apps.ExitCodes.USAGE_ERROR	csb.apps.ExitCodes-class.html#USAGE_ERROR
csb.apps.buildhmm.ExitCodes.IO_ERROR	csb.apps.buildhmm.ExitCodes-class.html#IO_ERROR
csb.apps.buildhmm.ExitCodes.INVALID_DATA	csb.apps.buildhmm.ExitCodes-class.html#INVALID_DATA
csb.apps.buildhmm.ExitCodes.EXT_TOOL_FAILURE	csb.apps.buildhmm.ExitCodes-class.html#EXT_TOOL_FAILURE
csb.apps.ExitCodes.CLEAN	csb.apps.ExitCodes-class.html#CLEAN
csb.apps.buildhmm.FASTAProfileBuilder	csb.apps.buildhmm.FASTAProfileBuilder-class.html
csb.apps.buildhmm.ProfileBuilder.__metaclass__	abc.ABCMeta-class.html
csb.apps.buildhmm.ProfileBuilder.TRANSITION_PSEUDO	csb.apps.buildhmm.ProfileBuilder-class.html#TRANSITION_PSEUDO
csb.apps.buildhmm.ProfileBuilder._abc_negative_cache	csb.apps.buildhmm.ProfileBuilder-class.html#_abc_negative_cache
csb.apps.buildhmm.ProfileBuilder.calibrate_hmm	csb.apps.buildhmm.ProfileBuilder-class.html#calibrate_hmm
csb.apps.buildhmm.ProfileBuilder.make_hmm	csb.apps.buildhmm.ProfileBuilder-class.html#make_hmm
csb.apps.buildhmm.ProfileBuilder.__init__	csb.apps.buildhmm.ProfileBuilder-class.html#__init__
csb.apps.buildhmm.ProfileBuilder._abc_cache	csb.apps.buildhmm.ProfileBuilder-class.html#_abc_cache
csb.apps.buildhmm.ProfileBuilder.create	csb.apps.buildhmm.ProfileBuilder-class.html#create
csb.apps.buildhmm.FASTAProfileBuilder.__abstractmethods__	csb.apps.buildhmm.FASTAProfileBuilder-class.html#__abstractmethods__
csb.apps.buildhmm.ProfileBuilder.run	csb.apps.buildhmm.ProfileBuilder-class.html#run
csb.apps.buildhmm.ProfileBuilder.target_id	csb.apps.buildhmm.ProfileBuilder-class.html#target_id
csb.apps.buildhmm.ProfileBuilder.build_alignment	csb.apps.buildhmm.ProfileBuilder-class.html#build_alignment
csb.apps.buildhmm.ProfileBuilder.EMISSION_PSEUDO	csb.apps.buildhmm.ProfileBuilder-class.html#EMISSION_PSEUDO
csb.apps.buildhmm.FASTAProfileBuilder.configure_input	csb.apps.buildhmm.FASTAProfileBuilder-class.html#configure_input
csb.apps.buildhmm.ProfileBuilder._abc_negative_cache_version	csb.apps.buildhmm.ProfileBuilder-class.html#_abc_negative_cache_version
csb.apps.buildhmm.ProfileBuilder._abc_registry	csb.apps.buildhmm.ProfileBuilder-class.html#_abc_registry
csb.apps.buildhmm.NoOutputError	csb.apps.buildhmm.NoOutputError-class.html
csb.apps.buildhmm.NoOutputError.__init__	csb.apps.buildhmm.NoOutputError-class.html#__init__
csb.apps.buildhmm.PDBProfileBuilder	csb.apps.buildhmm.PDBProfileBuilder-class.html
csb.apps.buildhmm.ProfileBuilder.__metaclass__	abc.ABCMeta-class.html
csb.apps.buildhmm.ProfileBuilder.TRANSITION_PSEUDO	csb.apps.buildhmm.ProfileBuilder-class.html#TRANSITION_PSEUDO
csb.apps.buildhmm.ProfileBuilder._abc_negative_cache	csb.apps.buildhmm.ProfileBuilder-class.html#_abc_negative_cache
csb.apps.buildhmm.ProfileBuilder.calibrate_hmm	csb.apps.buildhmm.ProfileBuilder-class.html#calibrate_hmm
csb.apps.buildhmm.PDBProfileBuilder.make_hmm	csb.apps.buildhmm.PDBProfileBuilder-class.html#make_hmm
csb.apps.buildhmm.ProfileBuilder.__init__	csb.apps.buildhmm.ProfileBuilder-class.html#__init__
csb.apps.buildhmm.ProfileBuilder._abc_cache	csb.apps.buildhmm.ProfileBuilder-class.html#_abc_cache
csb.apps.buildhmm.ProfileBuilder.create	csb.apps.buildhmm.ProfileBuilder-class.html#create
csb.apps.buildhmm.PDBProfileBuilder.__abstractmethods__	csb.apps.buildhmm.PDBProfileBuilder-class.html#__abstractmethods__
csb.apps.buildhmm.PDBProfileBuilder.format_structure	csb.apps.buildhmm.PDBProfileBuilder-class.html#format_structure
csb.apps.buildhmm.ProfileBuilder.run	csb.apps.buildhmm.ProfileBuilder-class.html#run
csb.apps.buildhmm.ProfileBuilder.target_id	csb.apps.buildhmm.ProfileBuilder-class.html#target_id
csb.apps.buildhmm.ProfileBuilder.build_alignment	csb.apps.buildhmm.ProfileBuilder-class.html#build_alignment
csb.apps.buildhmm.ProfileBuilder.EMISSION_PSEUDO	csb.apps.buildhmm.ProfileBuilder-class.html#EMISSION_PSEUDO
csb.apps.buildhmm.PDBProfileBuilder.configure_input	csb.apps.buildhmm.PDBProfileBuilder-class.html#configure_input
csb.apps.buildhmm.ProfileBuilder._abc_negative_cache_version	csb.apps.buildhmm.ProfileBuilder-class.html#_abc_negative_cache_version
csb.apps.buildhmm.ProfileBuilder._abc_registry	csb.apps.buildhmm.ProfileBuilder-class.html#_abc_registry
csb.apps.buildhmm.ProfileBuilder	csb.apps.buildhmm.ProfileBuilder-class.html
csb.apps.buildhmm.ProfileBuilder.__metaclass__	abc.ABCMeta-class.html
csb.apps.buildhmm.ProfileBuilder.TRANSITION_PSEUDO	csb.apps.buildhmm.ProfileBuilder-class.html#TRANSITION_PSEUDO
csb.apps.buildhmm.ProfileBuilder._abc_negative_cache	csb.apps.buildhmm.ProfileBuilder-class.html#_abc_negative_cache
csb.apps.buildhmm.ProfileBuilder.calibrate_hmm	csb.apps.buildhmm.ProfileBuilder-class.html#calibrate_hmm
csb.apps.buildhmm.ProfileBuilder.make_hmm	csb.apps.buildhmm.ProfileBuilder-class.html#make_hmm
csb.apps.buildhmm.ProfileBuilder.__init__	csb.apps.buildhmm.ProfileBuilder-class.html#__init__
csb.apps.buildhmm.ProfileBuilder._abc_cache	csb.apps.buildhmm.ProfileBuilder-class.html#_abc_cache
csb.apps.buildhmm.ProfileBuilder.create	csb.apps.buildhmm.ProfileBuilder-class.html#create
csb.apps.buildhmm.ProfileBuilder.__abstractmethods__	csb.apps.buildhmm.ProfileBuilder-class.html#__abstractmethods__
csb.apps.buildhmm.ProfileBuilder.run	csb.apps.buildhmm.ProfileBuilder-class.html#run
csb.apps.buildhmm.ProfileBuilder.target_id	csb.apps.buildhmm.ProfileBuilder-class.html#target_id
csb.apps.buildhmm.ProfileBuilder.build_alignment	csb.apps.buildhmm.ProfileBuilder-class.html#build_alignment
csb.apps.buildhmm.ProfileBuilder.EMISSION_PSEUDO	csb.apps.buildhmm.ProfileBuilder-class.html#EMISSION_PSEUDO
csb.apps.buildhmm.ProfileBuilder.configure_input	csb.apps.buildhmm.ProfileBuilder-class.html#configure_input
csb.apps.buildhmm.ProfileBuilder._abc_negative_cache_version	csb.apps.buildhmm.ProfileBuilder-class.html#_abc_negative_cache_version
csb.apps.buildhmm.ProfileBuilder._abc_registry	csb.apps.buildhmm.ProfileBuilder-class.html#_abc_registry
csb.apps.csfrag.AppRunner	csb.apps.csfrag.AppRunner-class.html
csb.apps.AppRunner.__metaclass__	abc.ABCMeta-class.html
csb.apps.AppRunner._abc_negative_cache	csb.apps.AppRunner-class.html#_abc_negative_cache
csb.apps.AppRunner.module	csb.apps.AppRunner-class.html#module
csb.apps.AppRunner.__init__	csb.apps.AppRunner-class.html#__init__
csb.apps.AppRunner._abc_cache	csb.apps.AppRunner-class.html#_abc_cache
csb.apps.csfrag.AppRunner.__abstractmethods__	csb.apps.csfrag.AppRunner-class.html#__abstractmethods__
csb.apps.csfrag.AppRunner.command_line	csb.apps.csfrag.AppRunner-class.html#command_line
csb.apps.AppRunner.program	csb.apps.AppRunner-class.html#program
csb.apps.AppRunner.exit	csb.apps.AppRunner-class.html#exit
csb.apps.AppRunner.run	csb.apps.AppRunner-class.html#run
csb.apps.AppRunner.args	csb.apps.AppRunner-class.html#args
csb.apps.AppRunner.initapp	csb.apps.AppRunner-class.html#initapp
csb.apps.csfrag.AppRunner.target	csb.apps.csfrag.AppRunner-class.html#target
csb.apps.AppRunner._abc_negative_cache_version	csb.apps.AppRunner-class.html#_abc_negative_cache_version
csb.apps.AppRunner._abc_registry	csb.apps.AppRunner-class.html#_abc_registry
csb.apps.csfrag.ArgumentError	csb.apps.csfrag.ArgumentError-class.html
csb.apps.csfrag.ArgumentIOError	csb.apps.csfrag.ArgumentIOError-class.html
csb.apps.csfrag.CSfrag	csb.apps.csfrag.CSfrag-class.html
csb.apps.csfrag.CSfrag.log	csb.apps.csfrag.CSfrag-class.html#log
csb.apps.csfrag.CSfrag.database	csb.apps.csfrag.CSfrag-class.html#database
csb.apps.csfrag.CSfrag.extract_fragments	csb.apps.csfrag.CSfrag-class.html#extract_fragments
csb.apps.csfrag.CSfrag.window	csb.apps.csfrag.CSfrag-class.html#window
csb.apps.csfrag.CSfrag.build_filtered_map	csb.apps.csfrag.CSfrag-class.html#build_filtered_map
csb.apps.csfrag.CSfrag.query	csb.apps.csfrag.CSfrag-class.html#query
csb.apps.csfrag.CSfrag.build_fragment_map	csb.apps.csfrag.CSfrag-class.html#build_fragment_map
csb.apps.csfrag.CSfrag.__init__	csb.apps.csfrag.CSfrag-class.html#__init__
csb.apps.csfrag.CSfragApp	csb.apps.csfrag.CSfragApp-class.html
csb.apps.Application.__metaclass__	abc.ABCMeta-class.html
csb.apps.Application._abc_negative_cache	csb.apps.Application-class.html#_abc_negative_cache
csb.apps.Application.__init__	csb.apps.Application-class.html#__init__
csb.apps.Application._abc_cache	csb.apps.Application-class.html#_abc_cache
csb.apps.csfrag.CSfragApp.log	csb.apps.csfrag.CSfragApp-class.html#log
csb.apps.csfrag.CSfragApp.__abstractmethods__	csb.apps.csfrag.CSfragApp-class.html#__abstractmethods__
csb.apps.Application.exit	csb.apps.Application-class.html#exit
csb.apps.csfrag.CSfragApp.main	csb.apps.csfrag.CSfragApp-class.html#main
csb.apps.Application.args	csb.apps.Application-class.html#args
csb.apps.Application._abc_negative_cache_version	csb.apps.Application-class.html#_abc_negative_cache_version
csb.apps.Application._abc_registry	csb.apps.Application-class.html#_abc_registry
csb.apps.csfrag.ExitCodes	csb.apps.csfrag.ExitCodes-class.html
csb.apps.ExitCodes.CRASH	csb.apps.ExitCodes-class.html#CRASH
csb.apps.csfrag.ExitCodes.NO_OUTPUT	csb.apps.csfrag.ExitCodes-class.html#NO_OUTPUT
csb.apps.csfrag.ExitCodes.IO_ERROR	csb.apps.csfrag.ExitCodes-class.html#IO_ERROR
csb.apps.csfrag.ExitCodes.INVALID_DATA	csb.apps.csfrag.ExitCodes-class.html#INVALID_DATA
csb.apps.ExitCodes.USAGE_ERROR	csb.apps.ExitCodes-class.html#USAGE_ERROR
csb.apps.ExitCodes.CLEAN	csb.apps.ExitCodes-class.html#CLEAN
csb.apps.csfrag.InvalidOperationError	csb.apps.csfrag.InvalidOperationError-class.html
csb.apps.csfrag.MatchInfo	csb.apps.csfrag.MatchInfo-class.html
csb.apps.csfrag.MatchInfo.__str__	csb.apps.csfrag.MatchInfo-class.html#__str__
csb.apps.csfrag.MatchInfo.__cmp__	csb.apps.csfrag.MatchInfo-class.html#__cmp__
csb.apps.csfrag.MatchInfo.__init__	csb.apps.csfrag.MatchInfo-class.html#__init__
csb.apps.csfrag.MatchTable	csb.apps.csfrag.MatchTable-class.html
csb.apps.csfrag.MatchTable.__getitem__	csb.apps.csfrag.MatchTable-class.html#__getitem__
csb.apps.csfrag.MatchTable.add	csb.apps.csfrag.MatchTable-class.html#add
csb.apps.csfrag.MatchTable.by_source	csb.apps.csfrag.MatchTable-class.html#by_source
csb.apps.csfrag.MatchTable.__iter__	csb.apps.csfrag.MatchTable-class.html#__iter__
csb.apps.csfrag.MatchTable.__init__	csb.apps.csfrag.MatchTable-class.html#__init__
csb.apps.csfrag.ScoringHelper	csb.apps.csfrag.ScoringHelper-class.html
csb.apps.csfrag.ScoringHelper.offsets	csb.apps.csfrag.ScoringHelper-class.html#offsets
csb.apps.csfrag.ScoringHelper.window	csb.apps.csfrag.ScoringHelper-class.html#window
csb.apps.csfrag.ScoringHelper.score	csb.apps.csfrag.ScoringHelper-class.html#score
csb.apps.csfrag.ScoringHelper.__init__	csb.apps.csfrag.ScoringHelper-class.html#__init__
csb.apps.csfrag.SecondaryShiftConverter	csb.apps.csfrag.SecondaryShiftConverter-class.html
csb.apps.csfrag.SecondaryShiftConverter.convert	csb.apps.csfrag.SecondaryShiftConverter-class.html#convert
csb.apps.csfrag.SecondaryShiftReader	csb.apps.csfrag.SecondaryShiftReader-class.html
csb.apps.csfrag.SecondaryShiftReader.DB	csb.apps.csfrag.SecondaryShiftReader-class.html#DB
csb.apps.csfrag.SecondaryShiftReader.load_database	csb.apps.csfrag.SecondaryShiftReader-class.html#load_database
csb.apps.csfrag.SecondaryShiftReader.read_shifts	csb.apps.csfrag.SecondaryShiftReader-class.html#read_shifts
csb.apps.embd.AppRunner	csb.apps.embd.AppRunner-class.html
csb.apps.AppRunner.__metaclass__	abc.ABCMeta-class.html
csb.apps.AppRunner._abc_negative_cache	csb.apps.AppRunner-class.html#_abc_negative_cache
csb.apps.AppRunner.module	csb.apps.AppRunner-class.html#module
csb.apps.AppRunner.__init__	csb.apps.AppRunner-class.html#__init__
csb.apps.AppRunner._abc_cache	csb.apps.AppRunner-class.html#_abc_cache
csb.apps.embd.AppRunner.__abstractmethods__	csb.apps.embd.AppRunner-class.html#__abstractmethods__
csb.apps.embd.AppRunner.command_line	csb.apps.embd.AppRunner-class.html#command_line
csb.apps.AppRunner.program	csb.apps.AppRunner-class.html#program
csb.apps.AppRunner.exit	csb.apps.AppRunner-class.html#exit
csb.apps.AppRunner.run	csb.apps.AppRunner-class.html#run
csb.apps.AppRunner.args	csb.apps.AppRunner-class.html#args
csb.apps.AppRunner.initapp	csb.apps.AppRunner-class.html#initapp
csb.apps.embd.AppRunner.target	csb.apps.embd.AppRunner-class.html#target
csb.apps.AppRunner._abc_negative_cache_version	csb.apps.AppRunner-class.html#_abc_negative_cache_version
csb.apps.AppRunner._abc_registry	csb.apps.AppRunner-class.html#_abc_registry
csb.apps.embd.Deconvolution	csb.apps.embd.Deconvolution-class.html
csb.apps.embd.Deconvolution._normalize_psf	csb.apps.embd.Deconvolution-class.html#_normalize_psf
csb.apps.embd.Deconvolution.eval_loss	csb.apps.embd.Deconvolution-class.html#eval_loss
csb.apps.embd.Deconvolution.__init__	csb.apps.embd.Deconvolution-class.html#__init__
csb.apps.embd.Deconvolution.beta_x	csb.apps.embd.Deconvolution-class.html#beta_x
csb.apps.embd.Deconvolution.calculate_image	csb.apps.embd.Deconvolution-class.html#calculate_image
csb.apps.embd.Deconvolution.eval_corr	csb.apps.embd.Deconvolution-class.html#eval_corr
csb.apps.embd.Deconvolution.beta_f	csb.apps.embd.Deconvolution-class.html#beta_f
csb.apps.embd.Deconvolution.run	csb.apps.embd.Deconvolution-class.html#run
csb.apps.embd.Deconvolution._calculate_image	csb.apps.embd.Deconvolution-class.html#_calculate_image
csb.apps.embd.Deconvolution.run_once	csb.apps.embd.Deconvolution-class.html#run_once
csb.apps.embd.Deconvolution._update_psf	csb.apps.embd.Deconvolution-class.html#_update_psf
csb.apps.embd.Deconvolution.data	csb.apps.embd.Deconvolution-class.html#data
csb.apps.embd.Deconvolution.loss	csb.apps.embd.Deconvolution-class.html#loss
csb.apps.embd.Deconvolution._initialize	csb.apps.embd.Deconvolution-class.html#_initialize
csb.apps.embd.Deconvolution._update_map	csb.apps.embd.Deconvolution-class.html#_update_map
csb.apps.embd.Deconvolution.correlation	csb.apps.embd.Deconvolution-class.html#correlation
csb.apps.embd.DeconvolutionApp	csb.apps.embd.DeconvolutionApp-class.html
csb.apps.Application.__metaclass__	abc.ABCMeta-class.html
csb.apps.Application._abc_negative_cache	csb.apps.Application-class.html#_abc_negative_cache
csb.apps.Application.__init__	csb.apps.Application-class.html#__init__
csb.apps.Application._abc_cache	csb.apps.Application-class.html#_abc_cache
csb.apps.embd.DeconvolutionApp.log	csb.apps.embd.DeconvolutionApp-class.html#log
csb.apps.embd.DeconvolutionApp.__abstractmethods__	csb.apps.embd.DeconvolutionApp-class.html#__abstractmethods__
csb.apps.Application.exit	csb.apps.Application-class.html#exit
csb.apps.embd.DeconvolutionApp.main	csb.apps.embd.DeconvolutionApp-class.html#main
csb.apps.embd.DeconvolutionApp.run	csb.apps.embd.DeconvolutionApp-class.html#run
csb.apps.Application.args	csb.apps.Application-class.html#args
csb.apps.Application._abc_negative_cache_version	csb.apps.Application-class.html#_abc_negative_cache_version
csb.apps.Application._abc_registry	csb.apps.Application-class.html#_abc_registry
csb.apps.embd.ExitCodes	csb.apps.embd.ExitCodes-class.html
csb.apps.ExitCodes.CRASH	csb.apps.ExitCodes-class.html#CRASH
csb.apps.embd.ExitCodes.IO_ERROR	csb.apps.embd.ExitCodes-class.html#IO_ERROR
csb.apps.embd.ExitCodes.ARGUMENT_ERROR	csb.apps.embd.ExitCodes-class.html#ARGUMENT_ERROR
csb.apps.embd.ExitCodes.INVALID_DATA	csb.apps.embd.ExitCodes-class.html#INVALID_DATA
csb.apps.ExitCodes.USAGE_ERROR	csb.apps.ExitCodes-class.html#USAGE_ERROR
csb.apps.ExitCodes.CLEAN	csb.apps.ExitCodes-class.html#CLEAN
csb.apps.embd.OutputPathBuilder	csb.apps.embd.OutputPathBuilder-class.html
csb.apps.embd.OutputPathBuilder.filename	csb.apps.embd.OutputPathBuilder-class.html#filename
csb.apps.embd.OutputPathBuilder.fullpath	csb.apps.embd.OutputPathBuilder-class.html#fullpath
csb.apps.embd.OutputPathBuilder.__init__	csb.apps.embd.OutputPathBuilder-class.html#__init__
csb.apps.embd.Util	csb.apps.embd.Util-class.html
csb.apps.embd.Util.corr	csb.apps.embd.Util-class.html#corr
csb.apps.helloworld.AppRunner	csb.apps.helloworld.AppRunner-class.html
csb.apps.AppRunner.__metaclass__	abc.ABCMeta-class.html
csb.apps.AppRunner._abc_negative_cache	csb.apps.AppRunner-class.html#_abc_negative_cache
csb.apps.AppRunner.module	csb.apps.AppRunner-class.html#module
csb.apps.AppRunner.__init__	csb.apps.AppRunner-class.html#__init__
csb.apps.AppRunner._abc_cache	csb.apps.AppRunner-class.html#_abc_cache
csb.apps.helloworld.AppRunner.__abstractmethods__	csb.apps.helloworld.AppRunner-class.html#__abstractmethods__
csb.apps.helloworld.AppRunner.command_line	csb.apps.helloworld.AppRunner-class.html#command_line
csb.apps.AppRunner.program	csb.apps.AppRunner-class.html#program
csb.apps.AppRunner.exit	csb.apps.AppRunner-class.html#exit
csb.apps.AppRunner.run	csb.apps.AppRunner-class.html#run
csb.apps.AppRunner.args	csb.apps.AppRunner-class.html#args
csb.apps.helloworld.AppRunner.initapp	csb.apps.helloworld.AppRunner-class.html#initapp
csb.apps.helloworld.AppRunner.target	csb.apps.helloworld.AppRunner-class.html#target
csb.apps.AppRunner._abc_negative_cache_version	csb.apps.AppRunner-class.html#_abc_negative_cache_version
csb.apps.AppRunner._abc_registry	csb.apps.AppRunner-class.html#_abc_registry
csb.apps.helloworld.ExitCodes	csb.apps.helloworld.ExitCodes-class.html
csb.apps.ExitCodes.CRASH	csb.apps.ExitCodes-class.html#CRASH
csb.apps.helloworld.ExitCodes.BAD_TEXT	csb.apps.helloworld.ExitCodes-class.html#BAD_TEXT
csb.apps.ExitCodes.USAGE_ERROR	csb.apps.ExitCodes-class.html#USAGE_ERROR
csb.apps.ExitCodes.CLEAN	csb.apps.ExitCodes-class.html#CLEAN
csb.apps.helloworld.HelloWorldApp	csb.apps.helloworld.HelloWorldApp-class.html
csb.apps.Application.__metaclass__	abc.ABCMeta-class.html
csb.apps.Application._abc_negative_cache	csb.apps.Application-class.html#_abc_negative_cache
csb.apps.Application.__init__	csb.apps.Application-class.html#__init__
csb.apps.Application._abc_cache	csb.apps.Application-class.html#_abc_cache
csb.apps.Application.log	csb.apps.Application-class.html#log
csb.apps.helloworld.HelloWorldApp.__abstractmethods__	csb.apps.helloworld.HelloWorldApp-class.html#__abstractmethods__
csb.apps.Application.exit	csb.apps.Application-class.html#exit
csb.apps.helloworld.HelloWorldApp.main	csb.apps.helloworld.HelloWorldApp-class.html#main
csb.apps.Application.args	csb.apps.Application-class.html#args
csb.apps.Application._abc_negative_cache_version	csb.apps.Application-class.html#_abc_negative_cache_version
csb.apps.Application._abc_registry	csb.apps.Application-class.html#_abc_registry
csb.apps.hhfrag.AppRunner	csb.apps.hhfrag.AppRunner-class.html
csb.apps.AppRunner.__metaclass__	abc.ABCMeta-class.html
csb.apps.AppRunner._abc_negative_cache	csb.apps.AppRunner-class.html#_abc_negative_cache
csb.apps.AppRunner.module	csb.apps.AppRunner-class.html#module
csb.apps.AppRunner.__init__	csb.apps.AppRunner-class.html#__init__
csb.apps.AppRunner._abc_cache	csb.apps.AppRunner-class.html#_abc_cache
csb.apps.hhfrag.AppRunner.__abstractmethods__	csb.apps.hhfrag.AppRunner-class.html#__abstractmethods__
csb.apps.hhfrag.AppRunner.command_line	csb.apps.hhfrag.AppRunner-class.html#command_line
csb.apps.AppRunner.program	csb.apps.AppRunner-class.html#program
csb.apps.AppRunner.exit	csb.apps.AppRunner-class.html#exit
csb.apps.AppRunner.run	csb.apps.AppRunner-class.html#run
csb.apps.AppRunner.args	csb.apps.AppRunner-class.html#args
csb.apps.AppRunner.initapp	csb.apps.AppRunner-class.html#initapp
csb.apps.hhfrag.AppRunner.target	csb.apps.hhfrag.AppRunner-class.html#target
csb.apps.AppRunner._abc_negative_cache_version	csb.apps.AppRunner-class.html#_abc_negative_cache_version
csb.apps.AppRunner._abc_registry	csb.apps.AppRunner-class.html#_abc_registry
csb.apps.hhfrag.ArgumentError	csb.apps.hhfrag.ArgumentError-class.html
csb.apps.hhfrag.ArgumentIOError	csb.apps.hhfrag.ArgumentIOError-class.html
csb.apps.hhfrag.ExitCodes	csb.apps.hhfrag.ExitCodes-class.html
csb.apps.ExitCodes.CRASH	csb.apps.ExitCodes-class.html#CRASH
csb.apps.hhfrag.ExitCodes.NO_OUTPUT	csb.apps.hhfrag.ExitCodes-class.html#NO_OUTPUT
csb.apps.hhfrag.ExitCodes.IO_ERROR	csb.apps.hhfrag.ExitCodes-class.html#IO_ERROR
csb.apps.hhfrag.ExitCodes.INVALID_DATA	csb.apps.hhfrag.ExitCodes-class.html#INVALID_DATA
csb.apps.ExitCodes.USAGE_ERROR	csb.apps.ExitCodes-class.html#USAGE_ERROR
csb.apps.ExitCodes.CLEAN	csb.apps.ExitCodes-class.html#CLEAN
csb.apps.hhfrag.ExitCodes.HHSEARCH_FAILURE	csb.apps.hhfrag.ExitCodes-class.html#HHSEARCH_FAILURE
csb.apps.hhfrag.HHfrag	csb.apps.hhfrag.HHfrag-class.html
csb.apps.hhfrag.HHfrag.extract_fragments	csb.apps.hhfrag.HHfrag-class.html#extract_fragments
csb.apps.hhfrag.HHfrag.build_hybrid_filtered_map	csb.apps.hhfrag.HHfrag-class.html#build_hybrid_filtered_map
csb.apps.hhfrag.HHfrag.build_combined_map	csb.apps.hhfrag.HHfrag-class.html#build_combined_map
csb.apps.hhfrag.HHfrag.query	csb.apps.hhfrag.HHfrag-class.html#query
csb.apps.hhfrag.HHfrag.__init__	csb.apps.hhfrag.HHfrag-class.html#__init__
csb.apps.hhfrag.HHfrag._plot_lengths	csb.apps.hhfrag.HHfrag-class.html#_plot_lengths
csb.apps.hhfrag.HHfrag.slice_query	csb.apps.hhfrag.HHfrag-class.html#slice_query
csb.apps.hhfrag.HHfrag.pdbs25	csb.apps.hhfrag.HHfrag-class.html#pdbs25
csb.apps.hhfrag.HHfrag.PDBS	csb.apps.hhfrag.HHfrag-class.html#PDBS
csb.apps.hhfrag.HHfrag.aligner	csb.apps.hhfrag.HHfrag-class.html#aligner
csb.apps.hhfrag.HHfrag._filter_event_handler	csb.apps.hhfrag.HHfrag-class.html#_filter_event_handler
csb.apps.hhfrag.HHfrag.log	csb.apps.hhfrag.HHfrag-class.html#log
csb.apps.hhfrag.HHfrag._merge_event_handler	csb.apps.hhfrag.HHfrag-class.html#_merge_event_handler
csb.apps.hhfrag.HHfrag.database	csb.apps.hhfrag.HHfrag-class.html#database
csb.apps.hhfrag.HHfrag.build_filtered_map	csb.apps.hhfrag.HHfrag-class.html#build_filtered_map
csb.apps.hhfrag.HHfrag.build_fragment_map	csb.apps.hhfrag.HHfrag-class.html#build_fragment_map
csb.apps.hhfrag.HHfragApp	csb.apps.hhfrag.HHfragApp-class.html
csb.apps.Application.__metaclass__	abc.ABCMeta-class.html
csb.apps.Application._abc_negative_cache	csb.apps.Application-class.html#_abc_negative_cache
csb.apps.Application.__init__	csb.apps.Application-class.html#__init__
csb.apps.Application._abc_cache	csb.apps.Application-class.html#_abc_cache
csb.apps.hhfrag.HHfragApp.log	csb.apps.hhfrag.HHfragApp-class.html#log
csb.apps.hhfrag.HHfragApp.__abstractmethods__	csb.apps.hhfrag.HHfragApp-class.html#__abstractmethods__
csb.apps.Application.exit	csb.apps.Application-class.html#exit
csb.apps.hhfrag.HHfragApp.main	csb.apps.hhfrag.HHfragApp-class.html#main
csb.apps.Application.args	csb.apps.Application-class.html#args
csb.apps.Application._abc_negative_cache_version	csb.apps.Application-class.html#_abc_negative_cache_version
csb.apps.Application._abc_registry	csb.apps.Application-class.html#_abc_registry
csb.apps.hhfrag.InvalidOperationError	csb.apps.hhfrag.InvalidOperationError-class.html
csb.apps.hhfrag.PredictionBuilder	csb.apps.hhfrag.PredictionBuilder-class.html
csb.apps.hhfrag.PredictionBuilder.product	csb.apps.hhfrag.PredictionBuilder-class.html#product
csb.apps.hhfrag.PredictionBuilder.addall	csb.apps.hhfrag.PredictionBuilder-class.html#addall
csb.apps.hhfrag.PredictionBuilder.create	csb.apps.hhfrag.PredictionBuilder-class.html#create
csb.apps.hhfrag.PredictionBuilder.HEADER	csb.apps.hhfrag.PredictionBuilder-class.html#HEADER
csb.apps.hhfrag.PredictionBuilder.add	csb.apps.hhfrag.PredictionBuilder-class.html#add
csb.apps.hhfrag.PredictionBuilder.format_angle	csb.apps.hhfrag.PredictionBuilder-class.html#format_angle
csb.apps.hhfrag.PredictionBuilder.__init__	csb.apps.hhfrag.PredictionBuilder-class.html#__init__
csb.apps.hhfrag.SliceContext	csb.apps.hhfrag.SliceContext-class.html
csb.apps.hhfrag.SliceContext.hits	csb.apps.hhfrag.SliceContext-class.html#hits
csb.apps.hhfrag.SliceContext.recurrence	csb.apps.hhfrag.SliceContext-class.html#recurrence
csb.apps.hhfrag.SliceContext.length	csb.apps.hhfrag.SliceContext-class.html#length
csb.apps.hhsearch.Context.result	csb.apps.hhsearch.Context-class.html#result
csb.apps.hhsearch.Context.query	csb.apps.hhsearch.Context-class.html#query
csb.apps.hhfrag.SliceContext.__lt__	csb.apps.hhfrag.SliceContext-class.html#__lt__
csb.apps.hhfrag.SliceContext.__init__	csb.apps.hhfrag.SliceContext-class.html#__init__
csb.apps.hhsearch.AppRunner	csb.apps.hhsearch.AppRunner-class.html
csb.apps.AppRunner.__metaclass__	abc.ABCMeta-class.html
csb.apps.AppRunner._abc_negative_cache	csb.apps.AppRunner-class.html#_abc_negative_cache
csb.apps.AppRunner.module	csb.apps.AppRunner-class.html#module
csb.apps.AppRunner.__init__	csb.apps.AppRunner-class.html#__init__
csb.apps.AppRunner._abc_cache	csb.apps.AppRunner-class.html#_abc_cache
csb.apps.hhsearch.AppRunner.__abstractmethods__	csb.apps.hhsearch.AppRunner-class.html#__abstractmethods__
csb.apps.hhsearch.AppRunner.command_line	csb.apps.hhsearch.AppRunner-class.html#command_line
csb.apps.AppRunner.program	csb.apps.AppRunner-class.html#program
csb.apps.AppRunner.exit	csb.apps.AppRunner-class.html#exit
csb.apps.AppRunner.run	csb.apps.AppRunner-class.html#run
csb.apps.AppRunner.args	csb.apps.AppRunner-class.html#args
csb.apps.AppRunner.initapp	csb.apps.AppRunner-class.html#initapp
csb.apps.hhsearch.AppRunner.target	csb.apps.hhsearch.AppRunner-class.html#target
csb.apps.AppRunner._abc_negative_cache_version	csb.apps.AppRunner-class.html#_abc_negative_cache_version
csb.apps.AppRunner._abc_registry	csb.apps.AppRunner-class.html#_abc_registry
csb.apps.hhsearch.Context	csb.apps.hhsearch.Context-class.html
csb.apps.hhsearch.Context.result	csb.apps.hhsearch.Context-class.html#result
csb.apps.hhsearch.Context.query	csb.apps.hhsearch.Context-class.html#query
csb.apps.hhsearch.Context.__init__	csb.apps.hhsearch.Context-class.html#__init__
csb.apps.hhsearch.ExitCodes	csb.apps.hhsearch.ExitCodes-class.html
csb.apps.ExitCodes.CRASH	csb.apps.ExitCodes-class.html#CRASH
csb.apps.ExitCodes.USAGE_ERROR	csb.apps.ExitCodes-class.html#USAGE_ERROR
csb.apps.hhsearch.ExitCodes.IO_ERROR	csb.apps.hhsearch.ExitCodes-class.html#IO_ERROR
csb.apps.hhsearch.ExitCodes.INVALID_DATA	csb.apps.hhsearch.ExitCodes-class.html#INVALID_DATA
csb.apps.hhsearch.ExitCodes.EXT_TOOL_FAILURE	csb.apps.hhsearch.ExitCodes-class.html#EXT_TOOL_FAILURE
csb.apps.ExitCodes.CLEAN	csb.apps.ExitCodes-class.html#CLEAN
csb.apps.hhsearch.HHTask	csb.apps.hhsearch.HHTask-class.html
csb.apps.hhsearch.Context.result	csb.apps.hhsearch.Context-class.html#result
csb.apps.hhsearch.Context.query	csb.apps.hhsearch.Context-class.html#query
csb.apps.hhsearch.HHTask.__init__	csb.apps.hhsearch.HHTask-class.html#__init__
csb.apps.hhsearch.HHsearch	csb.apps.hhsearch.HHsearch-class.html
csb.apps.hhsearch.HHsearch.program	csb.apps.hhsearch.HHsearch-class.html#program
csb.apps.hhsearch.HHsearch.parser	csb.apps.hhsearch.HHsearch-class.html#parser
csb.apps.hhsearch.HHsearch.mac_threshold	csb.apps.hhsearch.HHsearch-class.html#mac_threshold
csb.apps.hhsearch.HHsearch.__init__	csb.apps.hhsearch.HHsearch-class.html#__init__
csb.apps.hhsearch.HHsearch.min_probability	csb.apps.hhsearch.HHsearch-class.html#min_probability
csb.apps.hhsearch.HHsearch.runmany	csb.apps.hhsearch.HHsearch-class.html#runmany
csb.apps.hhsearch.HHsearch.max_evalue	csb.apps.hhsearch.HHsearch-class.html#max_evalue
csb.apps.hhsearch.HHsearch.max_alignments	csb.apps.hhsearch.HHsearch-class.html#max_alignments
csb.apps.hhsearch.HHsearch.run	csb.apps.hhsearch.HHsearch-class.html#run
csb.apps.hhsearch.HHsearch.db	csb.apps.hhsearch.HHsearch-class.html#db
csb.apps.hhsearch.HHsearch._get	csb.apps.hhsearch.HHsearch-class.html#_get
csb.apps.hhsearch.HHsearch.Options	csb.apps.hhsearch.HHsearch.Options-class.html
csb.apps.hhsearch.HHsearch.max_hits	csb.apps.hhsearch.HHsearch-class.html#max_hits
csb.apps.hhsearch.HHsearch._options	csb.apps.hhsearch.HHsearch-class.html#_options
csb.apps.hhsearch.HHsearch.ss	csb.apps.hhsearch.HHsearch-class.html#ss
csb.apps.hhsearch.HHsearch.cpu	csb.apps.hhsearch.HHsearch-class.html#cpu
csb.apps.hhsearch.HHsearch.Options	csb.apps.hhsearch.HHsearch.Options-class.html
csb.apps.hhsearch.HHsearch.Options.MACT	csb.apps.hhsearch.HHsearch.Options-class.html#MACT
csb.apps.hhsearch.HHsearch.Options.SS	csb.apps.hhsearch.HHsearch.Options-class.html#SS
csb.apps.hhsearch.HHsearch.Options.MIN_P	csb.apps.hhsearch.HHsearch.Options-class.html#MIN_P
csb.apps.hhsearch.HHsearch.Options.MAX_ALI	csb.apps.hhsearch.HHsearch.Options-class.html#MAX_ALI
csb.apps.hhsearch.HHsearch.Options.MAX_E	csb.apps.hhsearch.HHsearch.Options-class.html#MAX_E
csb.apps.hhsearch.HHsearch.Options.CPU	csb.apps.hhsearch.HHsearch.Options-class.html#CPU
csb.apps.hhsearch.HHsearch.Options.MAX_HITS	csb.apps.hhsearch.HHsearch.Options-class.html#MAX_HITS
csb.apps.hhsearch.HHsearchApp	csb.apps.hhsearch.HHsearchApp-class.html
csb.apps.Application.__metaclass__	abc.ABCMeta-class.html
csb.apps.Application._abc_negative_cache	csb.apps.Application-class.html#_abc_negative_cache
csb.apps.Application.__init__	csb.apps.Application-class.html#__init__
csb.apps.Application._abc_cache	csb.apps.Application-class.html#_abc_cache
csb.apps.Application.log	csb.apps.Application-class.html#log
csb.apps.hhsearch.HHsearchApp.__abstractmethods__	csb.apps.hhsearch.HHsearchApp-class.html#__abstractmethods__
csb.apps.Application.exit	csb.apps.Application-class.html#exit
csb.apps.hhsearch.HHsearchApp.main	csb.apps.hhsearch.HHsearchApp-class.html#main
csb.apps.Application.args	csb.apps.Application-class.html#args
csb.apps.Application._abc_negative_cache_version	csb.apps.Application-class.html#_abc_negative_cache_version
csb.apps.Application._abc_registry	csb.apps.Application-class.html#_abc_registry
csb.apps.hhsearch.SecStructureScoring	csb.apps.hhsearch.SecStructureScoring-class.html
csb.apps.hhsearch.SecStructureScoring.OFF	csb.apps.hhsearch.SecStructureScoring-class.html#OFF
csb.apps.hhsearch.SecStructureScoring.AFTER	csb.apps.hhsearch.SecStructureScoring-class.html#AFTER
csb.apps.hhsearch.SecStructureScoring.AFTER_PREDICTED	csb.apps.hhsearch.SecStructureScoring-class.html#AFTER_PREDICTED
csb.apps.hhsearch.SecStructureScoring.DURING	csb.apps.hhsearch.SecStructureScoring-class.html#DURING
csb.apps.hhsearch.SecStructureScoring.DURING_PREDICTED	csb.apps.hhsearch.SecStructureScoring-class.html#DURING_PREDICTED
csb.apps.precision.AppRunner	csb.apps.precision.AppRunner-class.html
csb.apps.AppRunner.__metaclass__	abc.ABCMeta-class.html
csb.apps.AppRunner._abc_negative_cache	csb.apps.AppRunner-class.html#_abc_negative_cache
csb.apps.AppRunner.module	csb.apps.AppRunner-class.html#module
csb.apps.AppRunner.__init__	csb.apps.AppRunner-class.html#__init__
csb.apps.AppRunner._abc_cache	csb.apps.AppRunner-class.html#_abc_cache
csb.apps.precision.AppRunner.__abstractmethods__	csb.apps.precision.AppRunner-class.html#__abstractmethods__
csb.apps.precision.AppRunner.command_line	csb.apps.precision.AppRunner-class.html#command_line
csb.apps.AppRunner.program	csb.apps.AppRunner-class.html#program
csb.apps.AppRunner.exit	csb.apps.AppRunner-class.html#exit
csb.apps.AppRunner.run	csb.apps.AppRunner-class.html#run
csb.apps.AppRunner.args	csb.apps.AppRunner-class.html#args
csb.apps.AppRunner.initapp	csb.apps.AppRunner-class.html#initapp
csb.apps.precision.AppRunner.target	csb.apps.precision.AppRunner-class.html#target
csb.apps.AppRunner._abc_negative_cache_version	csb.apps.AppRunner-class.html#_abc_negative_cache_version
csb.apps.AppRunner._abc_registry	csb.apps.AppRunner-class.html#_abc_registry
csb.apps.precision.ArgumentError	csb.apps.precision.ArgumentError-class.html
csb.apps.precision.ArgumentIOError	csb.apps.precision.ArgumentIOError-class.html
csb.apps.precision.ExitCodes	csb.apps.precision.ExitCodes-class.html
csb.apps.ExitCodes.CRASH	csb.apps.ExitCodes-class.html#CRASH
csb.apps.precision.ExitCodes.IO_ERROR	csb.apps.precision.ExitCodes-class.html#IO_ERROR
csb.apps.precision.ExitCodes.INVALID_DATA	csb.apps.precision.ExitCodes-class.html#INVALID_DATA
csb.apps.ExitCodes.USAGE_ERROR	csb.apps.ExitCodes-class.html#USAGE_ERROR
csb.apps.ExitCodes.CLEAN	csb.apps.ExitCodes-class.html#CLEAN
csb.apps.precision.GlobalInfo	csb.apps.precision.GlobalInfo-class.html
csb.apps.precision.GlobalInfo.__str__	csb.apps.precision.GlobalInfo-class.html#__str__
csb.apps.precision.GlobalInfo.__sub__	csb.apps.precision.GlobalInfo-class.html#__sub__
csb.apps.precision.GlobalInfo.__init__	csb.apps.precision.GlobalInfo-class.html#__init__
csb.apps.precision.LibrarySuperimposer	csb.apps.precision.LibrarySuperimposer-class.html
csb.apps.precision.LibrarySuperimposer.plot	csb.apps.precision.LibrarySuperimposer-class.html#plot
csb.apps.precision.LibrarySuperimposer.run	csb.apps.precision.LibrarySuperimposer-class.html#run
csb.apps.precision.LibrarySuperimposer.figure	csb.apps.precision.LibrarySuperimposer-class.html#figure
csb.apps.precision.LibrarySuperimposer.__del__	csb.apps.precision.LibrarySuperimposer-class.html#__del__
csb.apps.precision.LibrarySuperimposer.table	csb.apps.precision.LibrarySuperimposer-class.html#table
csb.apps.precision.LibrarySuperimposer.__init__	csb.apps.precision.LibrarySuperimposer-class.html#__init__
csb.apps.precision.PrecisionApp	csb.apps.precision.PrecisionApp-class.html
csb.apps.Application.__metaclass__	abc.ABCMeta-class.html
csb.apps.Application._abc_negative_cache	csb.apps.Application-class.html#_abc_negative_cache
csb.apps.Application.__init__	csb.apps.Application-class.html#__init__
csb.apps.Application._abc_cache	csb.apps.Application-class.html#_abc_cache
csb.apps.Application.log	csb.apps.Application-class.html#log
csb.apps.precision.PrecisionApp.__abstractmethods__	csb.apps.precision.PrecisionApp-class.html#__abstractmethods__
csb.apps.Application.exit	csb.apps.Application-class.html#exit
csb.apps.precision.PrecisionApp.main	csb.apps.precision.PrecisionApp-class.html#main
csb.apps.Application.args	csb.apps.Application-class.html#args
csb.apps.Application._abc_negative_cache_version	csb.apps.Application-class.html#_abc_negative_cache_version
csb.apps.Application._abc_registry	csb.apps.Application-class.html#_abc_registry
csb.apps.promix.AppRunner	csb.apps.promix.AppRunner-class.html
csb.apps.AppRunner.__metaclass__	abc.ABCMeta-class.html
csb.apps.AppRunner._abc_negative_cache	csb.apps.AppRunner-class.html#_abc_negative_cache
csb.apps.AppRunner.module	csb.apps.AppRunner-class.html#module
csb.apps.AppRunner.__init__	csb.apps.AppRunner-class.html#__init__
csb.apps.AppRunner._abc_cache	csb.apps.AppRunner-class.html#_abc_cache
csb.apps.promix.AppRunner.__abstractmethods__	csb.apps.promix.AppRunner-class.html#__abstractmethods__
csb.apps.promix.AppRunner.command_line	csb.apps.promix.AppRunner-class.html#command_line
csb.apps.AppRunner.program	csb.apps.AppRunner-class.html#program
csb.apps.AppRunner.exit	csb.apps.AppRunner-class.html#exit
csb.apps.AppRunner.run	csb.apps.AppRunner-class.html#run
csb.apps.AppRunner.args	csb.apps.AppRunner-class.html#args
csb.apps.promix.AppRunner.initapp	csb.apps.promix.AppRunner-class.html#initapp
csb.apps.promix.AppRunner.target	csb.apps.promix.AppRunner-class.html#target
csb.apps.AppRunner._abc_negative_cache_version	csb.apps.AppRunner-class.html#_abc_negative_cache_version
csb.apps.AppRunner._abc_registry	csb.apps.AppRunner-class.html#_abc_registry
csb.apps.promix.ExitCodes	csb.apps.promix.ExitCodes-class.html
csb.apps.ExitCodes.CRASH	csb.apps.ExitCodes-class.html#CRASH
csb.apps.promix.ExitCodes.IO_ERROR	csb.apps.promix.ExitCodes-class.html#IO_ERROR
csb.apps.ExitCodes.USAGE_ERROR	csb.apps.ExitCodes-class.html#USAGE_ERROR
csb.apps.ExitCodes.CLEAN	csb.apps.ExitCodes-class.html#CLEAN
csb.apps.promix.ProMixApp	csb.apps.promix.ProMixApp-class.html
csb.apps.Application.__metaclass__	abc.ABCMeta-class.html
csb.apps.Application._abc_negative_cache	csb.apps.Application-class.html#_abc_negative_cache
csb.apps.promix.ProMixApp.main_segments	csb.apps.promix.ProMixApp-class.html#main_segments
csb.apps.promix.ProMixApp.main_conformers	csb.apps.promix.ProMixApp-class.html#main_conformers
csb.apps.Application.__init__	csb.apps.Application-class.html#__init__
csb.apps.Application._abc_cache	csb.apps.Application-class.html#_abc_cache
csb.apps.Application.log	csb.apps.Application-class.html#log
csb.apps.promix.ProMixApp.__abstractmethods__	csb.apps.promix.ProMixApp-class.html#__abstractmethods__
csb.apps.Application.exit	csb.apps.Application-class.html#exit
csb.apps.promix.ProMixApp.main	csb.apps.promix.ProMixApp-class.html#main
csb.apps.Application.args	csb.apps.Application-class.html#args
csb.apps.Application._abc_negative_cache_version	csb.apps.Application-class.html#_abc_negative_cache_version
csb.apps.Application._abc_registry	csb.apps.Application-class.html#_abc_registry
csb.bio.fragments.Assignment	csb.bio.fragments.Assignment-class.html
csb.bio.fragments.FragmentMatch.tm_score	csb.bio.fragments.FragmentMatch-class.html#tm_score
csb.bio.fragments.FragmentMatch.probability	csb.bio.fragments.FragmentMatch-class.html#probability
csb.bio.fragments.Assignment.sequence	csb.bio.fragments.Assignment-class.html#sequence
csb.bio.fragments.Assignment.from_fragment	csb.bio.fragments.Assignment-class.html#from_fragment
csb.bio.fragments.Assignment.sec_structure_at	csb.bio.fragments.Assignment-class.html#sec_structure_at
csb.bio.fragments.Assignment.backbone_at	csb.bio.fragments.Assignment-class.html#backbone_at
csb.bio.fragments.Assignment.anchored_around	csb.bio.fragments.Assignment-class.html#anchored_around
csb.bio.fragments.FragmentMatch.qstart	csb.bio.fragments.FragmentMatch-class.html#qstart
csb.bio.fragments.Assignment.__init__	csb.bio.fragments.Assignment-class.html#__init__
csb.bio.fragments.Assignment.torsion	csb.bio.fragments.Assignment-class.html#torsion
csb.bio.fragments.Assignment.neff	csb.bio.fragments.Assignment-class.html#neff
csb.bio.fragments.Assignment.end	csb.bio.fragments.Assignment-class.html#end
csb.bio.fragments.Assignment._check_range	csb.bio.fragments.Assignment-class.html#_check_range
csb.bio.fragments.Assignment.transform	csb.bio.fragments.Assignment-class.html#transform
csb.bio.fragments.Assignment.overlap	csb.bio.fragments.Assignment-class.html#overlap
csb.bio.fragments.FragmentMatch.id	csb.bio.fragments.FragmentMatch-class.html#id
csb.bio.fragments.Assignment.start	csb.bio.fragments.Assignment-class.html#start
csb.bio.fragments.Assignment.score	csb.bio.fragments.Assignment-class.html#score
csb.bio.fragments.Assignment.rmsd_to	csb.bio.fragments.Assignment-class.html#rmsd_to
csb.bio.fragments.Assignment.mda_to	csb.bio.fragments.Assignment-class.html#mda_to
csb.bio.fragments.FragmentMatch.qend	csb.bio.fragments.FragmentMatch-class.html#qend
csb.bio.fragments.Assignment.backbone	csb.bio.fragments.Assignment-class.html#backbone
csb.bio.fragments.Assignment.nrmsd_to	csb.bio.fragments.Assignment-class.html#nrmsd_to
csb.bio.fragments.FragmentMatch.qlength	csb.bio.fragments.FragmentMatch-class.html#qlength
csb.bio.fragments.Assignment.torsion_at	csb.bio.fragments.Assignment-class.html#torsion_at
csb.bio.fragments.Assignment.secondary_structure	csb.bio.fragments.Assignment-class.html#secondary_structure
csb.bio.fragments.FragmentMatch.rmsd	csb.bio.fragments.FragmentMatch-class.html#rmsd
csb.bio.fragments.FragmentMatch.length	csb.bio.fragments.FragmentMatch-class.html#length
csb.bio.fragments.Assignment.source_id	csb.bio.fragments.Assignment-class.html#source_id
csb.bio.fragments.AssignmentFactory	csb.bio.fragments.AssignmentFactory-class.html
csb.bio.fragments.AssignmentFactory.residue	csb.bio.fragments.AssignmentFactory-class.html#residue
csb.bio.fragments.AssignmentFactory.target	csb.bio.fragments.AssignmentFactory-class.html#target
csb.bio.fragments.AssignmentFactory.assignment	csb.bio.fragments.AssignmentFactory-class.html#assignment
csb.bio.fragments.BenchmarkAdapter	csb.bio.fragments.BenchmarkAdapter-class.html
csb.bio.fragments.BenchmarkAdapter.prediction	csb.bio.fragments.BenchmarkAdapter-class.html#prediction
csb.bio.fragments.BenchmarkAdapter.connection_string	csb.bio.fragments.BenchmarkAdapter-class.html#connection_string
csb.bio.fragments.BenchmarkAdapter.targets	csb.bio.fragments.BenchmarkAdapter-class.html#targets
csb.bio.fragments.BenchmarkAdapter.__init__	csb.bio.fragments.BenchmarkAdapter-class.html#__init__
csb.bio.fragments.BenchmarkAdapter.assignments	csb.bio.fragments.BenchmarkAdapter-class.html#assignments
csb.bio.fragments.BenchmarkAdapter.target_details	csb.bio.fragments.BenchmarkAdapter-class.html#target_details
csb.bio.fragments.BenchmarkAdapter.centroids	csb.bio.fragments.BenchmarkAdapter-class.html#centroids
csb.bio.fragments.BenchmarkAdapter.Connection	csb.bio.fragments.BenchmarkAdapter.Connection-class.html
csb.bio.fragments.BenchmarkAdapter._attach_sec_structure	csb.bio.fragments.BenchmarkAdapter-class.html#_attach_sec_structure
csb.bio.fragments.BenchmarkAdapter.scores	csb.bio.fragments.BenchmarkAdapter-class.html#scores
csb.bio.fragments.BenchmarkAdapter.structure	csb.bio.fragments.BenchmarkAdapter-class.html#structure
csb.bio.fragments.BenchmarkAdapter.assignments_sec_structure	csb.bio.fragments.BenchmarkAdapter-class.html#assignments_sec_structure
csb.bio.fragments.BenchmarkAdapter.Connection	csb.bio.fragments.BenchmarkAdapter.Connection-class.html
csb.bio.fragments.BenchmarkAdapter.Connection.__exit__	csb.bio.fragments.BenchmarkAdapter.Connection-class.html#__exit__
csb.bio.fragments.BenchmarkAdapter.Connection.__enter__	csb.bio.fragments.BenchmarkAdapter.Connection-class.html#__enter__
csb.bio.fragments.BenchmarkAdapter.Connection.FACTORY	csb.bio.fragments.BenchmarkAdapter.Connection-class.html#FACTORY
csb.bio.fragments.BenchmarkAdapter.Connection.DSN	csb.bio.fragments.BenchmarkAdapter.Connection-class.html#DSN
csb.bio.fragments.BenchmarkAdapter.Connection.__init__	csb.bio.fragments.BenchmarkAdapter.Connection-class.html#__init__
csb.bio.fragments.ChemShiftAssignment	csb.bio.fragments.ChemShiftAssignment-class.html
csb.bio.fragments.FragmentMatch.tm_score	csb.bio.fragments.FragmentMatch-class.html#tm_score
csb.bio.fragments.FragmentMatch.probability	csb.bio.fragments.FragmentMatch-class.html#probability
csb.bio.fragments.Assignment.sequence	csb.bio.fragments.Assignment-class.html#sequence
csb.bio.fragments.Assignment.mda_to	csb.bio.fragments.Assignment-class.html#mda_to
csb.bio.fragments.Assignment.sec_structure_at	csb.bio.fragments.Assignment-class.html#sec_structure_at
csb.bio.fragments.Assignment.backbone_at	csb.bio.fragments.Assignment-class.html#backbone_at
csb.bio.fragments.Assignment.anchored_around	csb.bio.fragments.Assignment-class.html#anchored_around
csb.bio.fragments.FragmentMatch.qstart	csb.bio.fragments.FragmentMatch-class.html#qstart
csb.bio.fragments.ChemShiftAssignment.__init__	csb.bio.fragments.ChemShiftAssignment-class.html#__init__
csb.bio.fragments.Assignment.torsion	csb.bio.fragments.Assignment-class.html#torsion
csb.bio.fragments.Assignment.neff	csb.bio.fragments.Assignment-class.html#neff
csb.bio.fragments.Assignment.end	csb.bio.fragments.Assignment-class.html#end
csb.bio.fragments.Assignment.start	csb.bio.fragments.Assignment-class.html#start
csb.bio.fragments.Assignment._check_range	csb.bio.fragments.Assignment-class.html#_check_range
csb.bio.fragments.Assignment.transform	csb.bio.fragments.Assignment-class.html#transform
csb.bio.fragments.Assignment.overlap	csb.bio.fragments.Assignment-class.html#overlap
csb.bio.fragments.FragmentMatch.id	csb.bio.fragments.FragmentMatch-class.html#id
csb.bio.fragments.ChemShiftAssignment.BIT_SCORE_THRESHOLD	csb.bio.fragments.ChemShiftAssignment-class.html#BIT_SCORE_THRESHOLD
csb.bio.fragments.ChemShiftAssignment.window	csb.bio.fragments.ChemShiftAssignment-class.html#window
csb.bio.fragments.Assignment.score	csb.bio.fragments.Assignment-class.html#score
csb.bio.fragments.Assignment.rmsd_to	csb.bio.fragments.Assignment-class.html#rmsd_to
csb.bio.fragments.Assignment.from_fragment	csb.bio.fragments.Assignment-class.html#from_fragment
csb.bio.fragments.FragmentMatch.qend	csb.bio.fragments.FragmentMatch-class.html#qend
csb.bio.fragments.Assignment.backbone	csb.bio.fragments.Assignment-class.html#backbone
csb.bio.fragments.Assignment.nrmsd_to	csb.bio.fragments.Assignment-class.html#nrmsd_to
csb.bio.fragments.FragmentMatch.qlength	csb.bio.fragments.FragmentMatch-class.html#qlength
csb.bio.fragments.Assignment.torsion_at	csb.bio.fragments.Assignment-class.html#torsion_at
csb.bio.fragments.Assignment.secondary_structure	csb.bio.fragments.Assignment-class.html#secondary_structure
csb.bio.fragments.FragmentMatch.rmsd	csb.bio.fragments.FragmentMatch-class.html#rmsd
csb.bio.fragments.FragmentMatch.length	csb.bio.fragments.FragmentMatch-class.html#length
csb.bio.fragments.Assignment.source_id	csb.bio.fragments.Assignment-class.html#source_id
csb.bio.fragments.ChemShiftAssignmentFactory	csb.bio.fragments.ChemShiftAssignmentFactory-class.html
csb.bio.fragments.ChemShiftAssignmentFactory.residue	csb.bio.fragments.ChemShiftAssignmentFactory-class.html#residue
csb.bio.fragments.ChemShiftAssignmentFactory.target	csb.bio.fragments.ChemShiftAssignmentFactory-class.html#target
csb.bio.fragments.ChemShiftAssignmentFactory.assignment	csb.bio.fragments.ChemShiftAssignmentFactory-class.html#assignment
csb.bio.fragments.ChemShiftTarget	csb.bio.fragments.ChemShiftTarget-class.html
csb.core.AbstractContainer.__metaclass__	abc.ABCMeta-class.html
csb.bio.fragments.Target._children	csb.bio.fragments.Target-class.html#_children
csb.bio.fragments.Target.max_overlap	csb.bio.fragments.Target-class.html#max_overlap
csb.bio.fragments.Target.accession	csb.bio.fragments.Target-class.html#accession
csb.bio.fragments.Target.id	csb.bio.fragments.Target-class.html#id
csb.bio.fragments.ChemShiftTarget.__init__	csb.bio.fragments.ChemShiftTarget-class.html#__init__
csb.core.AbstractContainer._abc_cache	csb.core.AbstractContainer-class.html#_abc_cache
csb.bio.fragments.Target.errors	csb.bio.fragments.Target-class.html#errors
csb.bio.fragments.Target.__abstractmethods__	csb.bio.fragments.Target-class.html#__abstractmethods__
csb.bio.fragments.Target.chain_id	csb.bio.fragments.Target-class.html#chain_id
csb.bio.fragments.Target.assignall	csb.bio.fragments.Target-class.html#assignall
csb.core.AbstractContainer._abc_negative_cache	csb.core.AbstractContainer-class.html#_abc_negative_cache
csb.core.AbstractContainer.__len__	csb.core.AbstractContainer-class.html#__len__
csb.core.AbstractNIContainer.__getitem__	csb.core.AbstractNIContainer-class.html#__getitem__
csb.bio.fragments.Target.matches	csb.bio.fragments.Target-class.html#matches
csb.bio.fragments.ChemShiftTarget.clone	csb.bio.fragments.ChemShiftTarget-class.html#clone
csb.bio.fragments.Target.sequence	csb.bio.fragments.Target-class.html#sequence
csb.bio.fragments.Target.residues	csb.bio.fragments.Target-class.html#residues
csb.core.AbstractContainer.__iter__	csb.core.AbstractContainer-class.html#__iter__
csb.core.AbstractContainer.__bool__	csb.core.AbstractContainer-class.html#__bool__
csb.core.AbstractContainer.__nonzero__	csb.core.AbstractContainer-class.html#__nonzero__
csb.bio.fragments.Target.deserialize	csb.bio.fragments.Target-class.html#deserialize
csb.bio.fragments.Target.from_sequence	csb.bio.fragments.Target-class.html#from_sequence
csb.bio.fragments.Target.from_profile	csb.bio.fragments.Target-class.html#from_profile
csb.bio.fragments.Target.filter	csb.bio.fragments.Target-class.html#filter
csb.bio.fragments.Target.length	csb.bio.fragments.Target-class.html#length
csb.bio.fragments.Target._abc_negative_cache_version	csb.bio.fragments.Target-class.html#_abc_negative_cache_version
csb.core.AbstractContainer._abc_registry	csb.core.AbstractContainer-class.html#_abc_registry
csb.bio.fragments.ChemShiftTarget.assign	csb.bio.fragments.ChemShiftTarget-class.html#assign
csb.bio.fragments.ChemShiftTargetResidue	csb.bio.fragments.ChemShiftTargetResidue-class.html
csb.bio.fragments.TargetResidue.__init__	csb.bio.fragments.TargetResidue-class.html#__init__
csb.bio.fragments.TargetResidue.native	csb.bio.fragments.TargetResidue-class.html#native
csb.bio.fragments.TargetResidue.assignments	csb.bio.fragments.TargetResidue-class.html#assignments
csb.bio.fragments.TargetResidue.type	csb.bio.fragments.TargetResidue-class.html#type
csb.bio.fragments.ChemShiftTargetResidue.closest	csb.bio.fragments.ChemShiftTargetResidue-class.html#closest
csb.bio.fragments.TargetResidue.precision	csb.bio.fragments.TargetResidue-class.html#precision
csb.bio.fragments.TargetResidue.longest	csb.bio.fragments.TargetResidue-class.html#longest
csb.bio.fragments.TargetResidue.filter	csb.bio.fragments.TargetResidue-class.html#filter
csb.bio.fragments.TargetResidue.assign	csb.bio.fragments.TargetResidue-class.html#assign
csb.bio.fragments.ClusterDivergingError	csb.bio.fragments.ClusterDivergingError-class.html
csb.bio.fragments.ClusterEmptyError	csb.bio.fragments.ClusterEmptyError-class.html
csb.bio.fragments.ClusterExhaustedError	csb.bio.fragments.ClusterExhaustedError-class.html
csb.bio.fragments.ClusterNode	csb.bio.fragments.ClusterNode-class.html
csb.bio.fragments.ClusterNode.distance	csb.bio.fragments.ClusterNode-class.html#distance
csb.bio.fragments.ClusterNode.create	csb.bio.fragments.ClusterNode-class.html#create
csb.bio.fragments.ClusterNode.FIXED	csb.bio.fragments.ClusterNode-class.html#FIXED
csb.bio.fragments.ClusterNode.__init__	csb.bio.fragments.ClusterNode-class.html#__init__
csb.bio.fragments.ClusterRep	csb.bio.fragments.ClusterRep-class.html
csb.bio.fragments.ClusterRep.has_alternative	csb.bio.fragments.ClusterRep-class.html#has_alternative
csb.bio.fragments.ClusterRep.alternative	csb.bio.fragments.ClusterRep-class.html#alternative
csb.bio.fragments.ClusterRep.__init__	csb.bio.fragments.ClusterRep-class.html#__init__
csb.bio.fragments.ClusterRep.confidence	csb.bio.fragments.ClusterRep-class.html#confidence
csb.bio.fragments.ClusterRep.centroid	csb.bio.fragments.ClusterRep-class.html#centroid
csb.bio.fragments.ClusterRep.exchange	csb.bio.fragments.ClusterRep-class.html#exchange
csb.bio.fragments.ClusterRep.count	csb.bio.fragments.ClusterRep-class.html#count
csb.bio.fragments.ClusterRep.consistency	csb.bio.fragments.ClusterRep-class.html#consistency
csb.bio.fragments.ClusterRep.rejections	csb.bio.fragments.ClusterRep-class.html#rejections
csb.bio.fragments.ClusterRep.mean	csb.bio.fragments.ClusterRep-class.html#mean
csb.bio.fragments.FragmentCluster	csb.bio.fragments.FragmentCluster-class.html
csb.bio.fragments.FragmentCluster.MIN_LENGTH	csb.bio.fragments.FragmentCluster-class.html#MIN_LENGTH
csb.bio.fragments.FragmentCluster.threshold	csb.bio.fragments.FragmentCluster-class.html#threshold
csb.bio.fragments.FragmentCluster.__init__	csb.bio.fragments.FragmentCluster-class.html#__init__
csb.bio.fragments.FragmentCluster.centroid	csb.bio.fragments.FragmentCluster-class.html#centroid
csb.bio.fragments.FragmentCluster.connectedness	csb.bio.fragments.FragmentCluster-class.html#connectedness
csb.bio.fragments.FragmentCluster.reject	csb.bio.fragments.FragmentCluster-class.html#reject
csb.bio.fragments.FragmentCluster.fragments	csb.bio.fragments.FragmentCluster-class.html#fragments
csb.bio.fragments.FragmentCluster.shrink	csb.bio.fragments.FragmentCluster-class.html#shrink
csb.bio.fragments.FragmentCluster._distances	csb.bio.fragments.FragmentCluster-class.html#_distances
csb.bio.fragments.FragmentCluster._distance	csb.bio.fragments.FragmentCluster-class.html#_distance
csb.bio.fragments.FragmentCluster.count	csb.bio.fragments.FragmentCluster-class.html#count
csb.bio.fragments.FragmentCluster.items	csb.bio.fragments.FragmentCluster-class.html#items
csb.bio.fragments.FragmentCluster.shrinkone	csb.bio.fragments.FragmentCluster-class.html#shrinkone
csb.bio.fragments.FragmentCluster.mean	csb.bio.fragments.FragmentCluster-class.html#mean
csb.bio.fragments.FragmentMatch	csb.bio.fragments.FragmentMatch-class.html
csb.bio.fragments.FragmentMatch.tm_score	csb.bio.fragments.FragmentMatch-class.html#tm_score
csb.bio.fragments.FragmentMatch.probability	csb.bio.fragments.FragmentMatch-class.html#probability
csb.bio.fragments.FragmentMatch.qstart	csb.bio.fragments.FragmentMatch-class.html#qstart
csb.bio.fragments.FragmentMatch.__init__	csb.bio.fragments.FragmentMatch-class.html#__init__
csb.bio.fragments.FragmentMatch.end	csb.bio.fragments.FragmentMatch-class.html#end
csb.bio.fragments.FragmentMatch.id	csb.bio.fragments.FragmentMatch-class.html#id
csb.bio.fragments.FragmentMatch.start	csb.bio.fragments.FragmentMatch-class.html#start
csb.bio.fragments.FragmentMatch.qend	csb.bio.fragments.FragmentMatch-class.html#qend
csb.bio.fragments.FragmentMatch.qlength	csb.bio.fragments.FragmentMatch-class.html#qlength
csb.bio.fragments.FragmentMatch.rmsd	csb.bio.fragments.FragmentMatch-class.html#rmsd
csb.bio.fragments.FragmentMatch.length	csb.bio.fragments.FragmentMatch-class.html#length
csb.bio.fragments.FragmentMatch.source_id	csb.bio.fragments.FragmentMatch-class.html#source_id
csb.bio.fragments.FragmentTypes	csb.bio.fragments.FragmentTypes-class.html
csb.bio.fragments.FragmentTypes.Rosetta	csb.bio.fragments.FragmentTypes-class.html#Rosetta
csb.bio.fragments.FragmentTypes.ISites	csb.bio.fragments.FragmentTypes-class.html#ISites
csb.bio.fragments.FragmentTypes.HHfrag	csb.bio.fragments.FragmentTypes-class.html#HHfrag
csb.bio.fragments.FragmentTypes.StaticHH	csb.bio.fragments.FragmentTypes-class.html#StaticHH
csb.bio.fragments.Metrics	csb.bio.fragments.Metrics-class.html
csb.bio.fragments.Metrics.NORMALIZED_RMSD	csb.bio.fragments.Metrics-class.html#NORMALIZED_RMSD
csb.bio.fragments.Metrics.RMSD	csb.bio.fragments.Metrics-class.html#RMSD
csb.bio.fragments.Metrics.MDA	csb.bio.fragments.Metrics-class.html#MDA
csb.bio.fragments.ResidueAssignmentInfo	csb.bio.fragments.ResidueAssignmentInfo-class.html
csb.bio.fragments.ResidueAssignmentInfo.fragment	csb.bio.fragments.ResidueAssignmentInfo-class.html#fragment
csb.bio.fragments.ResidueAssignmentInfo.c_alpha	csb.bio.fragments.ResidueAssignmentInfo-class.html#c_alpha
csb.bio.fragments.ResidueAssignmentInfo.__init__	csb.bio.fragments.ResidueAssignmentInfo-class.html#__init__
csb.bio.fragments.ResidueEventInfo	csb.bio.fragments.ResidueEventInfo-class.html
csb.bio.fragments.ResidueEventInfo.rank	csb.bio.fragments.ResidueEventInfo-class.html#rank
csb.bio.fragments.ResidueEventInfo.type	csb.bio.fragments.ResidueEventInfo-class.html#type
csb.bio.fragments.ResidueEventInfo.__init__	csb.bio.fragments.ResidueEventInfo-class.html#__init__
csb.bio.fragments.ResidueEventInfo.torsion	csb.bio.fragments.ResidueEventInfo-class.html#torsion
csb.bio.fragments.RosettaFragsetFactory	csb.bio.fragments.RosettaFragsetFactory-class.html
csb.bio.fragments.RosettaFragsetFactory.mix	csb.bio.fragments.RosettaFragsetFactory-class.html#mix
csb.bio.fragments.RosettaFragsetFactory.make_filtered	csb.bio.fragments.RosettaFragsetFactory-class.html#make_filtered
csb.bio.fragments.RosettaFragsetFactory.make_combined	csb.bio.fragments.RosettaFragsetFactory-class.html#make_combined
csb.bio.fragments.RosettaFragsetFactory.make_chopped	csb.bio.fragments.RosettaFragsetFactory-class.html#make_chopped
csb.bio.fragments.RosettaFragsetFactory.__init__	csb.bio.fragments.RosettaFragsetFactory-class.html#__init__
csb.bio.fragments.RosettaFragsetFactory.make_fragset	csb.bio.fragments.RosettaFragsetFactory-class.html#make_fragset
csb.bio.fragments.Target	csb.bio.fragments.Target-class.html
csb.core.AbstractContainer.__metaclass__	abc.ABCMeta-class.html
csb.bio.fragments.Target._children	csb.bio.fragments.Target-class.html#_children
csb.bio.fragments.Target.max_overlap	csb.bio.fragments.Target-class.html#max_overlap
csb.bio.fragments.Target.accession	csb.bio.fragments.Target-class.html#accession
csb.bio.fragments.Target.id	csb.bio.fragments.Target-class.html#id
csb.bio.fragments.Target.__init__	csb.bio.fragments.Target-class.html#__init__
csb.core.AbstractContainer._abc_cache	csb.core.AbstractContainer-class.html#_abc_cache
csb.bio.fragments.Target.errors	csb.bio.fragments.Target-class.html#errors
csb.bio.fragments.Target.__abstractmethods__	csb.bio.fragments.Target-class.html#__abstractmethods__
csb.bio.fragments.Target.chain_id	csb.bio.fragments.Target-class.html#chain_id
csb.bio.fragments.Target.assignall	csb.bio.fragments.Target-class.html#assignall
csb.core.AbstractContainer._abc_negative_cache	csb.core.AbstractContainer-class.html#_abc_negative_cache
csb.core.AbstractContainer.__len__	csb.core.AbstractContainer-class.html#__len__
csb.core.AbstractNIContainer.__getitem__	csb.core.AbstractNIContainer-class.html#__getitem__
csb.bio.fragments.Target.matches	csb.bio.fragments.Target-class.html#matches
csb.bio.fragments.Target.clone	csb.bio.fragments.Target-class.html#clone
csb.bio.fragments.Target.sequence	csb.bio.fragments.Target-class.html#sequence
csb.bio.fragments.Target.residues	csb.bio.fragments.Target-class.html#residues
csb.core.AbstractContainer.__iter__	csb.core.AbstractContainer-class.html#__iter__
csb.core.AbstractContainer.__bool__	csb.core.AbstractContainer-class.html#__bool__
csb.core.AbstractContainer.__nonzero__	csb.core.AbstractContainer-class.html#__nonzero__
csb.bio.fragments.Target.deserialize	csb.bio.fragments.Target-class.html#deserialize
csb.bio.fragments.Target.from_sequence	csb.bio.fragments.Target-class.html#from_sequence
csb.bio.fragments.Target.from_profile	csb.bio.fragments.Target-class.html#from_profile
csb.bio.fragments.Target.filter	csb.bio.fragments.Target-class.html#filter
csb.bio.fragments.Target.length	csb.bio.fragments.Target-class.html#length
csb.bio.fragments.Target._abc_negative_cache_version	csb.bio.fragments.Target-class.html#_abc_negative_cache_version
csb.core.AbstractContainer._abc_registry	csb.core.AbstractContainer-class.html#_abc_registry
csb.bio.fragments.Target.assign	csb.bio.fragments.Target-class.html#assign
csb.bio.fragments.TargetResidue	csb.bio.fragments.TargetResidue-class.html
csb.bio.fragments.TargetResidue.__init__	csb.bio.fragments.TargetResidue-class.html#__init__
csb.bio.fragments.TargetResidue.native	csb.bio.fragments.TargetResidue-class.html#native
csb.bio.fragments.TargetResidue.assignments	csb.bio.fragments.TargetResidue-class.html#assignments
csb.bio.fragments.TargetResidue.type	csb.bio.fragments.TargetResidue-class.html#type
csb.bio.fragments.TargetResidue.closest	csb.bio.fragments.TargetResidue-class.html#closest
csb.bio.fragments.TargetResidue.precision	csb.bio.fragments.TargetResidue-class.html#precision
csb.bio.fragments.TargetResidue.longest	csb.bio.fragments.TargetResidue-class.html#longest
csb.bio.fragments.TargetResidue.filter	csb.bio.fragments.TargetResidue-class.html#filter
csb.bio.fragments.TargetResidue.assign	csb.bio.fragments.TargetResidue-class.html#assign
csb.bio.fragments.TorsionAnglePredictor	csb.bio.fragments.TorsionAnglePredictor-class.html
csb.bio.fragments.TorsionAnglePredictor.threshold	csb.bio.fragments.TorsionAnglePredictor-class.html#threshold
csb.bio.fragments.TorsionAnglePredictor.flat_torsion_map	csb.bio.fragments.TorsionAnglePredictor-class.html#flat_torsion_map
csb.bio.fragments.TorsionAnglePredictor.__init__	csb.bio.fragments.TorsionAnglePredictor-class.html#__init__
csb.bio.fragments.TorsionAnglePredictor.get_angles	csb.bio.fragments.TorsionAnglePredictor-class.html#get_angles
csb.bio.fragments.TorsionAnglePredictor._residue	csb.bio.fragments.TorsionAnglePredictor-class.html#_residue
csb.bio.fragments.TorsionAnglePredictor._filter	csb.bio.fragments.TorsionAnglePredictor-class.html#_filter
csb.bio.fragments.TorsionAnglePredictor.compute_single	csb.bio.fragments.TorsionAnglePredictor-class.html#compute_single
csb.bio.fragments.TorsionAnglePredictor.extend	csb.bio.fragments.TorsionAnglePredictor-class.html#extend
csb.bio.fragments.TorsionAnglePredictor.init	csb.bio.fragments.TorsionAnglePredictor-class.html#init
csb.bio.fragments.TorsionAnglePredictor.compute	csb.bio.fragments.TorsionAnglePredictor-class.html#compute
csb.bio.fragments.TorsionAnglePredictor.target	csb.bio.fragments.TorsionAnglePredictor-class.html#target
csb.bio.fragments.TorsionPredictionInfo	csb.bio.fragments.TorsionPredictionInfo-class.html
csb.bio.fragments.TorsionPredictionInfo.__str__	csb.bio.fragments.TorsionPredictionInfo-class.html#__str__
csb.bio.fragments.TorsionPredictionInfo.__lt__	csb.bio.fragments.TorsionPredictionInfo-class.html#__lt__
csb.bio.fragments.TorsionPredictionInfo.as_tuple	csb.bio.fragments.TorsionPredictionInfo-class.html#as_tuple
csb.bio.fragments.TorsionPredictionInfo.__init__	csb.bio.fragments.TorsionPredictionInfo-class.html#__init__
csb.bio.fragments.rosetta.ExtendedOutputBuilder	csb.bio.fragments.rosetta.ExtendedOutputBuilder-class.html
csb.bio.fragments.rosetta.OutputBuilder.add_fragment	csb.bio.fragments.rosetta.OutputBuilder-class.html#add_fragment
csb.bio.fragments.rosetta.OutputBuilder.add_position	csb.bio.fragments.rosetta.OutputBuilder-class.html#add_position
csb.bio.fragments.rosetta.ExtendedOutputBuilder.add_residue	csb.bio.fragments.rosetta.ExtendedOutputBuilder-class.html#add_residue
csb.bio.fragments.rosetta.OutputBuilder.output	csb.bio.fragments.rosetta.OutputBuilder-class.html#output
csb.bio.fragments.rosetta.OutputBuilder.__init__	csb.bio.fragments.rosetta.OutputBuilder-class.html#__init__
csb.bio.fragments.rosetta.OutputBuilder	csb.bio.fragments.rosetta.OutputBuilder-class.html
csb.bio.fragments.rosetta.OutputBuilder.add_position	csb.bio.fragments.rosetta.OutputBuilder-class.html#add_position
csb.bio.fragments.rosetta.OutputBuilder.add_fragment	csb.bio.fragments.rosetta.OutputBuilder-class.html#add_fragment
csb.bio.fragments.rosetta.OutputBuilder.add_residue	csb.bio.fragments.rosetta.OutputBuilder-class.html#add_residue
csb.bio.fragments.rosetta.OutputBuilder.output	csb.bio.fragments.rosetta.OutputBuilder-class.html#output
csb.bio.fragments.rosetta.OutputBuilder.__init__	csb.bio.fragments.rosetta.OutputBuilder-class.html#__init__
csb.bio.fragments.rosetta.ResidueInfo	csb.bio.fragments.rosetta.ResidueInfo-class.html
csb.bio.fragments.rosetta.ResidueInfo.phi	csb.bio.fragments.rosetta.ResidueInfo-class.html#phi
csb.bio.fragments.rosetta.ResidueInfo.psi	csb.bio.fragments.rosetta.ResidueInfo-class.html#psi
csb.bio.fragments.rosetta.ResidueInfo.copy	csb.bio.fragments.rosetta.ResidueInfo-class.html#copy
csb.bio.fragments.rosetta.ResidueInfo.omega	csb.bio.fragments.rosetta.ResidueInfo-class.html#omega
csb.bio.fragments.rosetta.ResidueInfo.__init__	csb.bio.fragments.rosetta.ResidueInfo-class.html#__init__
csb.bio.fragments.rosetta.RosettaFragment	csb.bio.fragments.rosetta.RosettaFragment-class.html
csb.bio.fragments.rosetta.RosettaFragment.chain	csb.bio.fragments.rosetta.RosettaFragment-class.html#chain
csb.bio.fragments.rosetta.RosettaFragment.__str__	csb.bio.fragments.rosetta.RosettaFragment-class.html#__str__
csb.bio.fragments.rosetta.RosettaFragment.accession	csb.bio.fragments.rosetta.RosettaFragment-class.html#accession
csb.bio.fragments.rosetta.RosettaFragment.subregion	csb.bio.fragments.rosetta.RosettaFragment-class.html#subregion
csb.bio.fragments.rosetta.RosettaFragment.__lt__	csb.bio.fragments.rosetta.RosettaFragment-class.html#__lt__
csb.bio.fragments.rosetta.RosettaFragment.qstart	csb.bio.fragments.rosetta.RosettaFragment-class.html#qstart
csb.bio.fragments.rosetta.RosettaFragment.__init__	csb.bio.fragments.rosetta.RosettaFragment-class.html#__init__
csb.bio.fragments.rosetta.RosettaFragment.torsion	csb.bio.fragments.rosetta.RosettaFragment-class.html#torsion
csb.bio.fragments.rosetta.RosettaFragment.end	csb.bio.fragments.rosetta.RosettaFragment-class.html#end
csb.bio.fragments.rosetta.RosettaFragment.id	csb.bio.fragments.rosetta.RosettaFragment-class.html#id
csb.bio.fragments.rosetta.RosettaFragment.start	csb.bio.fragments.rosetta.RosettaFragment-class.html#start
csb.bio.fragments.rosetta.RosettaFragment.score	csb.bio.fragments.rosetta.RosettaFragment-class.html#score
csb.bio.fragments.rosetta.RosettaFragment.__len__	csb.bio.fragments.rosetta.RosettaFragment-class.html#__len__
csb.bio.fragments.rosetta.RosettaFragment.qend	csb.bio.fragments.rosetta.RosettaFragment-class.html#qend
csb.bio.fragments.rosetta.RosettaFragment.residues	csb.bio.fragments.rosetta.RosettaFragment-class.html#residues
csb.bio.fragments.rosetta.RosettaFragment.__iter__	csb.bio.fragments.rosetta.RosettaFragment-class.html#__iter__
csb.bio.fragments.rosetta.RosettaFragment.length	csb.bio.fragments.rosetta.RosettaFragment-class.html#length
csb.bio.fragments.rosetta.RosettaFragment.source_id	csb.bio.fragments.rosetta.RosettaFragment-class.html#source_id
csb.bio.fragments.rosetta.RosettaFragment.from_object	csb.bio.fragments.rosetta.RosettaFragment-class.html#from_object
csb.bio.fragments.rosetta.RosettaFragmentMap	csb.bio.fragments.rosetta.RosettaFragmentMap-class.html
csb.core.AbstractContainer.__metaclass__	abc.ABCMeta-class.html
csb.bio.fragments.rosetta.RosettaFragmentMap.dump	csb.bio.fragments.rosetta.RosettaFragmentMap-class.html#dump
csb.bio.fragments.rosetta.RosettaFragmentMap._children	csb.bio.fragments.rosetta.RosettaFragmentMap-class.html#_children
csb.bio.fragments.rosetta.RosettaFragmentMap.starting_at	csb.bio.fragments.rosetta.RosettaFragmentMap-class.html#starting_at
csb.core.AbstractContainer._abc_negative_cache	csb.core.AbstractContainer-class.html#_abc_negative_cache
csb.bio.fragments.rosetta.RosettaFragmentMap.sources	csb.bio.fragments.rosetta.RosettaFragmentMap-class.html#sources
csb.bio.fragments.rosetta.RosettaFragmentMap.at	csb.bio.fragments.rosetta.RosettaFragmentMap-class.html#at
csb.bio.fragments.rosetta.RosettaFragmentMap.__init__	csb.bio.fragments.rosetta.RosettaFragmentMap-class.html#__init__
csb.bio.fragments.rosetta.RosettaFragmentMap.size	csb.bio.fragments.rosetta.RosettaFragmentMap-class.html#size
csb.core.AbstractContainer._abc_cache	csb.core.AbstractContainer-class.html#_abc_cache
csb.bio.fragments.rosetta.RosettaFragmentMap._maxend	csb.bio.fragments.rosetta.RosettaFragmentMap-class.html#_maxend
csb.bio.fragments.rosetta.RosettaFragmentMap.__abstractmethods__	csb.bio.fragments.rosetta.RosettaFragmentMap-class.html#__abstractmethods__
csb.bio.fragments.rosetta.RosettaFragmentMap.append	csb.bio.fragments.rosetta.RosettaFragmentMap-class.html#append
csb.bio.fragments.rosetta.RosettaFragmentMap.__len__	csb.bio.fragments.rosetta.RosettaFragmentMap-class.html#__len__
csb.bio.fragments.rosetta.RosettaFragmentMap.sort	csb.bio.fragments.rosetta.RosettaFragmentMap-class.html#sort
csb.core.AbstractContainer.__getitem__	csb.core.AbstractContainer-class.html#__getitem__
csb.bio.fragments.rosetta.RosettaFragmentMap.read	csb.bio.fragments.rosetta.RosettaFragmentMap-class.html#read
csb.bio.fragments.rosetta.RosettaFragmentMap.complement	csb.bio.fragments.rosetta.RosettaFragmentMap-class.html#complement
csb.core.AbstractContainer.__iter__	csb.core.AbstractContainer-class.html#__iter__
csb.bio.fragments.rosetta.RosettaFragmentMap.unconfident_positions	csb.bio.fragments.rosetta.RosettaFragmentMap-class.html#unconfident_positions
csb.core.AbstractContainer.__bool__	csb.core.AbstractContainer-class.html#__bool__
csb.bio.fragments.rosetta.RosettaFragmentMap.mark_unconfident	csb.bio.fragments.rosetta.RosettaFragmentMap-class.html#mark_unconfident
csb.bio.fragments.rosetta.RosettaFragmentMap.fromsource	csb.bio.fragments.rosetta.RosettaFragmentMap-class.html#fromsource
csb.core.AbstractContainer.__nonzero__	csb.core.AbstractContainer-class.html#__nonzero__
csb.bio.fragments.rosetta.RosettaFragmentMap.start_positions	csb.bio.fragments.rosetta.RosettaFragmentMap-class.html#start_positions
csb.bio.fragments.rosetta.RosettaFragmentMap._abc_negative_cache_version	csb.bio.fragments.rosetta.RosettaFragmentMap-class.html#_abc_negative_cache_version
csb.core.AbstractContainer._abc_registry	csb.core.AbstractContainer-class.html#_abc_registry
csb.bio.hmm.EVDParameters	csb.bio.hmm.EVDParameters-class.html
csb.bio.hmm.EVDParameters.__nonzero__	csb.bio.hmm.EVDParameters-class.html#__nonzero__
csb.bio.hmm.EVDParameters.__bool__	csb.bio.hmm.EVDParameters-class.html#__bool__
csb.bio.hmm.EVDParameters.__init__	csb.bio.hmm.EVDParameters-class.html#__init__
csb.bio.hmm.EmissionExistsError	csb.bio.hmm.EmissionExistsError-class.html
csb.bio.hmm.EmissionProfileSegment	csb.bio.hmm.EmissionProfileSegment-class.html
csb.bio.hmm.ProfileHMMSegment.source_start	csb.bio.hmm.ProfileHMMSegment-class.html#source_start
csb.bio.hmm.ProfileHMM.serialize	csb.bio.hmm.ProfileHMM-class.html#serialize
csb.bio.hmm.ProfileHMM.transition_pseudocounts	csb.bio.hmm.ProfileHMM-class.html#transition_pseudocounts
csb.bio.hmm.ProfileHMM.subregion	csb.bio.hmm.ProfileHMM-class.html#subregion
csb.bio.hmm.ProfileHMM._convert	csb.bio.hmm.ProfileHMM-class.html#_convert
csb.bio.hmm.ProfileHMM._assign_secstructure	csb.bio.hmm.ProfileHMM-class.html#_assign_secstructure
csb.bio.hmm.ProfileHMM.effective_matches	csb.bio.hmm.ProfileHMM-class.html#effective_matches
csb.bio.hmm.ProfileHMM.id	csb.bio.hmm.ProfileHMM-class.html#id
csb.bio.hmm.ProfileHMM.alignment	csb.bio.hmm.ProfileHMM-class.html#alignment
csb.bio.hmm.ProfileHMM.layers	csb.bio.hmm.ProfileHMM-class.html#layers
csb.bio.hmm.ProfileHMM.logbase	csb.bio.hmm.ProfileHMM-class.html#logbase
csb.bio.hmm.ProfileHMM.scale	csb.bio.hmm.ProfileHMM-class.html#scale
csb.bio.hmm.ProfileHMM.end	csb.bio.hmm.ProfileHMM-class.html#end
csb.bio.hmm.ProfileHMM.chain	csb.bio.hmm.ProfileHMM-class.html#chain
csb.bio.hmm.ProfileHMM.emission_profile	csb.bio.hmm.ProfileHMM-class.html#emission_profile
csb.bio.hmm.EmissionProfileSegment._build_graph	csb.bio.hmm.EmissionProfileSegment-class.html#_build_graph
csb.bio.hmm.ProfileHMM.score_units	csb.bio.hmm.ProfileHMM-class.html#score_units
csb.bio.hmm.ProfileHMM.start	csb.bio.hmm.ProfileHMM-class.html#start
csb.bio.hmm.ProfileHMM.version	csb.bio.hmm.ProfileHMM-class.html#version
csb.bio.hmm.ProfileHMMSegment.__init__	csb.bio.hmm.ProfileHMMSegment-class.html#__init__
csb.bio.hmm.ProfileHMM.dssp_solvent	csb.bio.hmm.ProfileHMM-class.html#dssp_solvent
csb.bio.hmm.ProfileHMM.family	csb.bio.hmm.ProfileHMM-class.html#family
csb.bio.hmm.ProfileHMMSegment.source_end	csb.bio.hmm.ProfileHMMSegment-class.html#source_end
csb.bio.hmm.ProfileHMM.all_layers	csb.bio.hmm.ProfileHMM-class.html#all_layers
csb.bio.hmm.ProfileHMM.to_hmm	csb.bio.hmm.ProfileHMM-class.html#to_hmm
csb.bio.hmm.ProfileHMM.residues	csb.bio.hmm.ProfileHMM-class.html#residues
csb.bio.hmm.ProfileHMM.emission_similarity	csb.bio.hmm.ProfileHMM-class.html#emission_similarity
csb.bio.hmm.ProfileHMM.segment	csb.bio.hmm.ProfileHMM-class.html#segment
csb.bio.hmm.ProfileHMM.structure	csb.bio.hmm.ProfileHMM-class.html#structure
csb.bio.hmm.ProfileHMM.pseudocounts	csb.bio.hmm.ProfileHMM-class.html#pseudocounts
csb.bio.hmm.ProfileHMM.name	csb.bio.hmm.ProfileHMM-class.html#name
csb.bio.hmm.ProfileHMM.deserialize	csb.bio.hmm.ProfileHMM-class.html#deserialize
csb.bio.hmm.ProfileHMM.start_insertion	csb.bio.hmm.ProfileHMM-class.html#start_insertion
csb.bio.hmm.ProfileHMM.psipred	csb.bio.hmm.ProfileHMM-class.html#psipred
csb.bio.hmm.ProfileHMM.emission_pseudocounts	csb.bio.hmm.ProfileHMM-class.html#emission_pseudocounts
csb.bio.hmm.ProfileHMM.evd	csb.bio.hmm.ProfileHMM-class.html#evd
csb.bio.hmm.ProfileHMM.convert_scores	csb.bio.hmm.ProfileHMM-class.html#convert_scores
csb.bio.hmm.ProfileHMM.consensus	csb.bio.hmm.ProfileHMM-class.html#consensus
csb.bio.hmm.ProfileHMM.length	csb.bio.hmm.ProfileHMM-class.html#length
csb.bio.hmm.ProfileHMM.add_emission_pseudocounts	csb.bio.hmm.ProfileHMM-class.html#add_emission_pseudocounts
csb.bio.hmm.ProfileHMM.add_transition_pseudocounts	csb.bio.hmm.ProfileHMM-class.html#add_transition_pseudocounts
csb.bio.hmm.ProfileHMM.dssp	csb.bio.hmm.ProfileHMM-class.html#dssp
csb.bio.hmm.ProfileHMM.has_structure	csb.bio.hmm.ProfileHMM-class.html#has_structure
csb.bio.hmm.EmissionTable	csb.bio.hmm.EmissionTable-class.html
csb.core.BaseDictionaryContainer._exception	csb.core.BaseDictionaryContainer-class.html#_exception
csb.bio.hmm.EmissionTable.set	csb.bio.hmm.EmissionTable-class.html#set
csb.core.DictionaryContainer._update	csb.core.DictionaryContainer-class.html#_update
csb.bio.hmm.EmissionTable.append	csb.bio.hmm.EmissionTable-class.html#append
csb.core.BaseDictionaryContainer.__contains__	csb.core.BaseDictionaryContainer-class.html#__contains__
csb.core.BaseDictionaryContainer._getinternal	csb.core.BaseDictionaryContainer-class.html#_getinternal
csb.core.DictionaryContainer._remove	csb.core.DictionaryContainer-class.html#_remove
csb.bio.hmm.EmissionTable.__init__	csb.bio.hmm.EmissionTable-class.html#__init__
csb.core.BaseDictionaryContainer._set_items	csb.core.BaseDictionaryContainer-class.html#_set_items
csb.core.BaseDictionaryContainer._update_items	csb.core.BaseDictionaryContainer-class.html#_update_items
csb.core.BaseDictionaryContainer.__len__	csb.core.BaseDictionaryContainer-class.html#__len__
csb.core.BaseDictionaryContainer.__getitem__	csb.core.BaseDictionaryContainer-class.html#__getitem__
csb.core.BaseDictionaryContainer.keys	csb.core.BaseDictionaryContainer-class.html#keys
csb.bio.hmm.EmissionTable.update	csb.bio.hmm.EmissionTable-class.html#update
csb.core.BaseDictionaryContainer.__iter__	csb.core.BaseDictionaryContainer-class.html#__iter__
csb.core.BaseDictionaryContainer.__bool__	csb.core.BaseDictionaryContainer-class.html#__bool__
csb.core.BaseDictionaryContainer._append_item	csb.core.BaseDictionaryContainer-class.html#_append_item
csb.core.BaseDictionaryContainer.__nonzero__	csb.core.BaseDictionaryContainer-class.html#__nonzero__
csb.core.BaseDictionaryContainer.length	csb.core.BaseDictionaryContainer-class.html#length
csb.core.BaseDictionaryContainer._remove_item	csb.core.BaseDictionaryContainer-class.html#_remove_item
csb.core.BaseDictionaryContainer.__repr__	csb.core.BaseDictionaryContainer-class.html#__repr__
csb.core.DictionaryContainer._set	csb.core.DictionaryContainer-class.html#_set
csb.bio.hmm.HHpredHit	csb.bio.hmm.HHpredHit-class.html
csb.bio.hmm.HHpredHit.probability	csb.bio.hmm.HHpredHit-class.html#probability
csb.bio.hmm.HHpredHit.similarity	csb.bio.hmm.HHpredHit-class.html#similarity
csb.bio.hmm.HHpredHit.__str__	csb.bio.hmm.HHpredHit-class.html#__str__
csb.bio.hmm.HHpredHit.prob_sum	csb.bio.hmm.HHpredHit-class.html#prob_sum
csb.bio.hmm.HHpredHit.rank	csb.bio.hmm.HHpredHit-class.html#rank
csb.bio.hmm.HHpredHit.__lt__	csb.bio.hmm.HHpredHit-class.html#__lt__
csb.bio.hmm.HHpredHit.qstart	csb.bio.hmm.HHpredHit-class.html#qstart
csb.bio.hmm.HHpredHit.alignment	csb.bio.hmm.HHpredHit-class.html#alignment
csb.bio.hmm.HHpredHit.end	csb.bio.hmm.HHpredHit-class.html#end
csb.bio.hmm.HHpredHit.evalue	csb.bio.hmm.HHpredHit-class.html#evalue
csb.bio.hmm.HHpredHit.slength	csb.bio.hmm.HHpredHit-class.html#slength
csb.bio.hmm.HHpredHit.id	csb.bio.hmm.HHpredHit-class.html#id
csb.bio.hmm.HHpredHit.start	csb.bio.hmm.HHpredHit-class.html#start
csb.bio.hmm.HHpredHit.score	csb.bio.hmm.HHpredHit-class.html#score
csb.bio.hmm.HHpredHit.__init__	csb.bio.hmm.HHpredHit-class.html#__init__
csb.bio.hmm.HHpredHit.surpasses	csb.bio.hmm.HHpredHit-class.html#surpasses
csb.bio.hmm.HHpredHit.ss_score	csb.bio.hmm.HHpredHit-class.html#ss_score
csb.bio.hmm.HHpredHit.qend	csb.bio.hmm.HHpredHit-class.html#qend
csb.bio.hmm.HHpredHit.equals	csb.bio.hmm.HHpredHit-class.html#equals
csb.bio.hmm.HHpredHit.qlength	csb.bio.hmm.HHpredHit-class.html#qlength
csb.bio.hmm.HHpredHit.includes	csb.bio.hmm.HHpredHit-class.html#includes
csb.bio.hmm.HHpredHit.identity	csb.bio.hmm.HHpredHit-class.html#identity
csb.bio.hmm.HHpredHit.add_alignment	csb.bio.hmm.HHpredHit-class.html#add_alignment
csb.bio.hmm.HHpredHit.length	csb.bio.hmm.HHpredHit-class.html#length
csb.bio.hmm.HHpredHit.__repr__	csb.bio.hmm.HHpredHit-class.html#__repr__
csb.bio.hmm.HHpredHit.pvalue	csb.bio.hmm.HHpredHit-class.html#pvalue
csb.bio.hmm.HHpredHitAlignment	csb.bio.hmm.HHpredHitAlignment-class.html
csb.bio.sequence.AbstractAlignment.__metaclass__	abc.ABCMeta-class.html
csb.bio.sequence.AbstractAlignment._abc_negative_cache	csb.bio.sequence.AbstractAlignment-class.html#_abc_negative_cache
csb.bio.sequence.AbstractAlignment._factory	csb.bio.sequence.AbstractAlignment-class.html#_factory
csb.bio.sequence.SequenceAlignment.parse	csb.bio.sequence.SequenceAlignment-class.html#parse
csb.bio.sequence.AbstractAlignment.subregion	csb.bio.sequence.AbstractAlignment-class.html#subregion
csb.bio.hmm.HHpredHitAlignment.to_a3m	csb.bio.hmm.HHpredHitAlignment-class.html#to_a3m
csb.bio.hmm.HHpredHitAlignment.query	csb.bio.hmm.HHpredHitAlignment-class.html#query
csb.bio.hmm.HHpredHitAlignment.__init__	csb.bio.hmm.HHpredHitAlignment-class.html#__init__
csb.bio.sequence.AbstractAlignment.size	csb.bio.sequence.AbstractAlignment-class.html#size
csb.bio.sequence.AbstractAlignment._abc_cache	csb.bio.sequence.AbstractAlignment-class.html#_abc_cache
csb.bio.sequence.AbstractAlignment.rows	csb.bio.sequence.AbstractAlignment-class.html#rows
csb.bio.sequence.SequenceAlignment._construct	csb.bio.sequence.SequenceAlignment-class.html#_construct
csb.bio.sequence.AbstractAlignment._range	csb.bio.sequence.AbstractAlignment-class.html#_range
csb.bio.hmm.HHpredHitAlignment.segments	csb.bio.hmm.HHpredHitAlignment-class.html#segments
csb.bio.sequence.SequenceAlignment.__abstractmethods__	csb.bio.sequence.SequenceAlignment-class.html#__abstractmethods__
csb.bio.hmm.HHpredHitAlignment.GAP	csb.bio.hmm.HHpredHitAlignment-class.html#GAP
csb.bio.sequence.AbstractAlignment.add	csb.bio.sequence.AbstractAlignment-class.html#add
csb.bio.hmm.HHpredHitAlignment.subject	csb.bio.hmm.HHpredHitAlignment-class.html#subject
csb.bio.sequence.AbstractAlignment.columns	csb.bio.sequence.AbstractAlignment-class.html#columns
csb.bio.sequence.AbstractAlignment.gap_at	csb.bio.sequence.AbstractAlignment-class.html#gap_at
csb.bio.sequence.AbstractAlignment._get_column	csb.bio.sequence.AbstractAlignment-class.html#_get_column
csb.bio.sequence.AbstractAlignment.__getitem__	csb.bio.sequence.AbstractAlignment-class.html#__getitem__
csb.bio.sequence.AbstractAlignment.format	csb.bio.sequence.AbstractAlignment-class.html#format
csb.bio.sequence.AbstractAlignment.__iter__	csb.bio.sequence.AbstractAlignment-class.html#__iter__
csb.bio.sequence.AbstractAlignment._initialize	csb.bio.sequence.AbstractAlignment-class.html#_initialize
csb.bio.sequence.AbstractAlignment.length	csb.bio.sequence.AbstractAlignment-class.html#length
csb.bio.sequence.AbstractAlignment._abc_negative_cache_version	csb.bio.sequence.AbstractAlignment-class.html#_abc_negative_cache_version
csb.bio.sequence.AbstractAlignment._abc_registry	csb.bio.sequence.AbstractAlignment-class.html#_abc_registry
csb.bio.sequence.AbstractAlignment._extract	csb.bio.sequence.AbstractAlignment-class.html#_extract
csb.bio.hmm.HHpredHitList	csb.bio.hmm.HHpredHitList-class.html
csb.bio.hmm.HHpredHitList.no_of_seqs	csb.bio.hmm.HHpredHitList-class.html#no_of_seqs
csb.bio.hmm.HHpredHitList.__str__	csb.bio.hmm.HHpredHitList-class.html#__str__
csb.bio.hmm.HHpredHitList.__init__	csb.bio.hmm.HHpredHitList-class.html#__init__
csb.bio.hmm.HHpredHitList.neff	csb.bio.hmm.HHpredHitList-class.html#neff
csb.bio.hmm.HHpredHitList.command	csb.bio.hmm.HHpredHitList-class.html#command
csb.bio.hmm.HHpredHitList.__len__	csb.bio.hmm.HHpredHitList-class.html#__len__
csb.bio.hmm.HHpredHitList.sort	csb.bio.hmm.HHpredHitList-class.html#sort
csb.bio.hmm.HHpredHitList.__getitem__	csb.bio.hmm.HHpredHitList-class.html#__getitem__
csb.bio.hmm.HHpredHitList.__iter__	csb.bio.hmm.HHpredHitList-class.html#__iter__
csb.bio.hmm.HHpredHitList.searched_hmms	csb.bio.hmm.HHpredHitList-class.html#searched_hmms
csb.bio.hmm.HHpredHitList.date	csb.bio.hmm.HHpredHitList-class.html#date
csb.bio.hmm.HHpredHitList.match_columns	csb.bio.hmm.HHpredHitList-class.html#match_columns
csb.bio.hmm.HHpredHitList.query_name	csb.bio.hmm.HHpredHitList-class.html#query_name
csb.bio.hmm.HHpredHitList.__repr__	csb.bio.hmm.HHpredHitList-class.html#__repr__
csb.bio.hmm.HMMArgumentError	csb.bio.hmm.HMMArgumentError-class.html
csb.bio.hmm.HMMLayer	csb.bio.hmm.HMMLayer-class.html
csb.bio.hmm.HMMLayer._exception	csb.bio.hmm.HMMLayer-class.html#_exception
csb.core.DictionaryContainer._update	csb.core.DictionaryContainer-class.html#_update
csb.bio.hmm.HMMLayer.rank	csb.bio.hmm.HMMLayer-class.html#rank
csb.bio.hmm.HMMLayer.effective_matches	csb.bio.hmm.HMMLayer-class.html#effective_matches
csb.bio.hmm.HMMLayer.append	csb.bio.hmm.HMMLayer-class.html#append
csb.bio.hmm.HMMLayer.residue	csb.bio.hmm.HMMLayer-class.html#residue
csb.core.BaseDictionaryContainer.__contains__	csb.core.BaseDictionaryContainer-class.html#__contains__
csb.core.BaseDictionaryContainer._getinternal	csb.core.BaseDictionaryContainer-class.html#_getinternal
csb.core.DictionaryContainer._remove	csb.core.DictionaryContainer-class.html#_remove
csb.bio.hmm.HMMLayer.__init__	csb.bio.hmm.HMMLayer-class.html#__init__
csb.core.BaseDictionaryContainer._set_items	csb.core.BaseDictionaryContainer-class.html#_set_items
csb.core.BaseDictionaryContainer._update_items	csb.core.BaseDictionaryContainer-class.html#_update_items
csb.core.BaseDictionaryContainer.__len__	csb.core.BaseDictionaryContainer-class.html#__len__
csb.bio.hmm.HMMLayer.effective_deletions	csb.bio.hmm.HMMLayer-class.html#effective_deletions
csb.core.BaseDictionaryContainer.__getitem__	csb.core.BaseDictionaryContainer-class.html#__getitem__
csb.core.BaseDictionaryContainer.keys	csb.core.BaseDictionaryContainer-class.html#keys
csb.bio.hmm.HMMLayer.update	csb.bio.hmm.HMMLayer-class.html#update
csb.core.BaseDictionaryContainer.__iter__	csb.core.BaseDictionaryContainer-class.html#__iter__
csb.bio.hmm.HMMLayer.effective_insertions	csb.bio.hmm.HMMLayer-class.html#effective_insertions
csb.core.BaseDictionaryContainer.__bool__	csb.core.BaseDictionaryContainer-class.html#__bool__
csb.core.BaseDictionaryContainer._append_item	csb.core.BaseDictionaryContainer-class.html#_append_item
csb.core.BaseDictionaryContainer.__nonzero__	csb.core.BaseDictionaryContainer-class.html#__nonzero__
csb.core.BaseDictionaryContainer.length	csb.core.BaseDictionaryContainer-class.html#length
csb.core.BaseDictionaryContainer._remove_item	csb.core.BaseDictionaryContainer-class.html#_remove_item
csb.core.BaseDictionaryContainer.__repr__	csb.core.BaseDictionaryContainer-class.html#__repr__
csb.core.DictionaryContainer._set	csb.core.DictionaryContainer-class.html#_set
csb.bio.hmm.HMMLayersCollection	csb.bio.hmm.HMMLayersCollection-class.html
csb.bio.hmm.HMMLayersCollection._exception	csb.bio.hmm.HMMLayersCollection-class.html#_exception
csb.core.CollectionContainer._update	csb.core.CollectionContainer-class.html#_update
csb.core.BaseCollectionContainer.last_index	csb.core.BaseCollectionContainer-class.html#last_index
csb.bio.hmm.HMMLayersCollection.__init__	csb.bio.hmm.HMMLayersCollection-class.html#__init__
csb.core.BaseCollectionContainer.__contains__	csb.core.BaseCollectionContainer-class.html#__contains__
csb.core.BaseCollectionContainer._getinternal	csb.core.BaseCollectionContainer-class.html#_getinternal
csb.core.CollectionContainer.append	csb.core.CollectionContainer-class.html#append
csb.core.BaseCollectionContainer._update_items	csb.core.BaseCollectionContainer-class.html#_update_items
csb.core.BaseCollectionContainer.__len__	csb.core.BaseCollectionContainer-class.html#__len__
csb.core.BaseCollectionContainer.__getitem__	csb.core.BaseCollectionContainer-class.html#__getitem__
csb.core.BaseCollectionContainer.__iter__	csb.core.BaseCollectionContainer-class.html#__iter__
csb.core.BaseCollectionContainer.__bool__	csb.core.BaseCollectionContainer-class.html#__bool__
csb.core.BaseCollectionContainer.start_index	csb.core.BaseCollectionContainer-class.html#start_index
csb.core.BaseCollectionContainer._append_item	csb.core.BaseCollectionContainer-class.html#_append_item
csb.core.BaseCollectionContainer.__nonzero__	csb.core.BaseCollectionContainer-class.html#__nonzero__
csb.core.BaseCollectionContainer._sort	csb.core.BaseCollectionContainer-class.html#_sort
csb.core.BaseCollectionContainer.length	csb.core.BaseCollectionContainer-class.html#length
csb.core.BaseCollectionContainer.__repr__	csb.core.BaseCollectionContainer-class.html#__repr__
csb.bio.hmm.LayerIndexError	csb.bio.hmm.LayerIndexError-class.html
csb.bio.hmm.ProfileHMM	csb.bio.hmm.ProfileHMM-class.html
csb.bio.hmm.ProfileHMM.chain	csb.bio.hmm.ProfileHMM-class.html#chain
csb.bio.hmm.ProfileHMM.serialize	csb.bio.hmm.ProfileHMM-class.html#serialize
csb.bio.hmm.ProfileHMM.transition_pseudocounts	csb.bio.hmm.ProfileHMM-class.html#transition_pseudocounts
csb.bio.hmm.ProfileHMM.subregion	csb.bio.hmm.ProfileHMM-class.html#subregion
csb.bio.hmm.ProfileHMM._convert	csb.bio.hmm.ProfileHMM-class.html#_convert
csb.bio.hmm.ProfileHMM._assign_secstructure	csb.bio.hmm.ProfileHMM-class.html#_assign_secstructure
csb.bio.hmm.ProfileHMM.effective_matches	csb.bio.hmm.ProfileHMM-class.html#effective_matches
csb.bio.hmm.ProfileHMM.id	csb.bio.hmm.ProfileHMM-class.html#id
csb.bio.hmm.ProfileHMM.__init__	csb.bio.hmm.ProfileHMM-class.html#__init__
csb.bio.hmm.ProfileHMM.layers	csb.bio.hmm.ProfileHMM-class.html#layers
csb.bio.hmm.ProfileHMM.logbase	csb.bio.hmm.ProfileHMM-class.html#logbase
csb.bio.hmm.ProfileHMM.scale	csb.bio.hmm.ProfileHMM-class.html#scale
csb.bio.hmm.ProfileHMM.end	csb.bio.hmm.ProfileHMM-class.html#end
csb.bio.hmm.ProfileHMM.family	csb.bio.hmm.ProfileHMM-class.html#family
csb.bio.hmm.ProfileHMM.emission_profile	csb.bio.hmm.ProfileHMM-class.html#emission_profile
csb.bio.hmm.ProfileHMM.score_units	csb.bio.hmm.ProfileHMM-class.html#score_units
csb.bio.hmm.ProfileHMM.start	csb.bio.hmm.ProfileHMM-class.html#start
csb.bio.hmm.ProfileHMM.version	csb.bio.hmm.ProfileHMM-class.html#version
csb.bio.hmm.ProfileHMM.alignment	csb.bio.hmm.ProfileHMM-class.html#alignment
csb.bio.hmm.ProfileHMM.dssp_solvent	csb.bio.hmm.ProfileHMM-class.html#dssp_solvent
csb.bio.hmm.ProfileHMM.all_layers	csb.bio.hmm.ProfileHMM-class.html#all_layers
csb.bio.hmm.ProfileHMM.to_hmm	csb.bio.hmm.ProfileHMM-class.html#to_hmm
csb.bio.hmm.ProfileHMM.residues	csb.bio.hmm.ProfileHMM-class.html#residues
csb.bio.hmm.ProfileHMM.emission_similarity	csb.bio.hmm.ProfileHMM-class.html#emission_similarity
csb.bio.hmm.ProfileHMM.segment	csb.bio.hmm.ProfileHMM-class.html#segment
csb.bio.hmm.ProfileHMM.structure	csb.bio.hmm.ProfileHMM-class.html#structure
csb.bio.hmm.ProfileHMM.pseudocounts	csb.bio.hmm.ProfileHMM-class.html#pseudocounts
csb.bio.hmm.ProfileHMM.name	csb.bio.hmm.ProfileHMM-class.html#name
csb.bio.hmm.ProfileHMM.deserialize	csb.bio.hmm.ProfileHMM-class.html#deserialize
csb.bio.hmm.ProfileHMM.start_insertion	csb.bio.hmm.ProfileHMM-class.html#start_insertion
csb.bio.hmm.ProfileHMM.psipred	csb.bio.hmm.ProfileHMM-class.html#psipred
csb.bio.hmm.ProfileHMM.emission_pseudocounts	csb.bio.hmm.ProfileHMM-class.html#emission_pseudocounts
csb.bio.hmm.ProfileHMM.evd	csb.bio.hmm.ProfileHMM-class.html#evd
csb.bio.hmm.ProfileHMM.convert_scores	csb.bio.hmm.ProfileHMM-class.html#convert_scores
csb.bio.hmm.ProfileHMM.consensus	csb.bio.hmm.ProfileHMM-class.html#consensus
csb.bio.hmm.ProfileHMM.length	csb.bio.hmm.ProfileHMM-class.html#length
csb.bio.hmm.ProfileHMM.add_emission_pseudocounts	csb.bio.hmm.ProfileHMM-class.html#add_emission_pseudocounts
csb.bio.hmm.ProfileHMM.add_transition_pseudocounts	csb.bio.hmm.ProfileHMM-class.html#add_transition_pseudocounts
csb.bio.hmm.ProfileHMM.dssp	csb.bio.hmm.ProfileHMM-class.html#dssp
csb.bio.hmm.ProfileHMM.has_structure	csb.bio.hmm.ProfileHMM-class.html#has_structure
csb.bio.hmm.ProfileHMMRegion	csb.bio.hmm.ProfileHMMRegion-class.html
csb.bio.hmm.ProfileHMMRegion.source_start	csb.bio.hmm.ProfileHMMRegion-class.html#source_start
csb.bio.hmm.ProfileHMM.serialize	csb.bio.hmm.ProfileHMM-class.html#serialize
csb.bio.hmm.ProfileHMM.transition_pseudocounts	csb.bio.hmm.ProfileHMM-class.html#transition_pseudocounts
csb.bio.hmm.ProfileHMM.subregion	csb.bio.hmm.ProfileHMM-class.html#subregion
csb.bio.hmm.ProfileHMM._convert	csb.bio.hmm.ProfileHMM-class.html#_convert
csb.bio.hmm.ProfileHMM._assign_secstructure	csb.bio.hmm.ProfileHMM-class.html#_assign_secstructure
csb.bio.hmm.ProfileHMM.effective_matches	csb.bio.hmm.ProfileHMM-class.html#effective_matches
csb.bio.hmm.ProfileHMM.id	csb.bio.hmm.ProfileHMM-class.html#id
csb.bio.hmm.ProfileHMM.alignment	csb.bio.hmm.ProfileHMM-class.html#alignment
csb.bio.hmm.ProfileHMM.layers	csb.bio.hmm.ProfileHMM-class.html#layers
csb.bio.hmm.ProfileHMM.logbase	csb.bio.hmm.ProfileHMM-class.html#logbase
csb.bio.hmm.ProfileHMM.scale	csb.bio.hmm.ProfileHMM-class.html#scale
csb.bio.hmm.ProfileHMM.end	csb.bio.hmm.ProfileHMM-class.html#end
csb.bio.hmm.ProfileHMM.chain	csb.bio.hmm.ProfileHMM-class.html#chain
csb.bio.hmm.ProfileHMM.emission_profile	csb.bio.hmm.ProfileHMM-class.html#emission_profile
csb.bio.hmm.ProfileHMM.score_units	csb.bio.hmm.ProfileHMM-class.html#score_units
csb.bio.hmm.ProfileHMM.start	csb.bio.hmm.ProfileHMM-class.html#start
csb.bio.hmm.ProfileHMM.version	csb.bio.hmm.ProfileHMM-class.html#version
csb.bio.hmm.ProfileHMMRegion.__init__	csb.bio.hmm.ProfileHMMRegion-class.html#__init__
csb.bio.hmm.ProfileHMM.dssp_solvent	csb.bio.hmm.ProfileHMM-class.html#dssp_solvent
csb.bio.hmm.ProfileHMM.family	csb.bio.hmm.ProfileHMM-class.html#family
csb.bio.hmm.ProfileHMMRegion.source_end	csb.bio.hmm.ProfileHMMRegion-class.html#source_end
csb.bio.hmm.ProfileHMM.all_layers	csb.bio.hmm.ProfileHMM-class.html#all_layers
csb.bio.hmm.ProfileHMM.to_hmm	csb.bio.hmm.ProfileHMM-class.html#to_hmm
csb.bio.hmm.ProfileHMM.residues	csb.bio.hmm.ProfileHMM-class.html#residues
csb.bio.hmm.ProfileHMM.emission_similarity	csb.bio.hmm.ProfileHMM-class.html#emission_similarity
csb.bio.hmm.ProfileHMM.segment	csb.bio.hmm.ProfileHMM-class.html#segment
csb.bio.hmm.ProfileHMM.structure	csb.bio.hmm.ProfileHMM-class.html#structure
csb.bio.hmm.ProfileHMM.pseudocounts	csb.bio.hmm.ProfileHMM-class.html#pseudocounts
csb.bio.hmm.ProfileHMM.name	csb.bio.hmm.ProfileHMM-class.html#name
csb.bio.hmm.ProfileHMM.deserialize	csb.bio.hmm.ProfileHMM-class.html#deserialize
csb.bio.hmm.ProfileHMM.start_insertion	csb.bio.hmm.ProfileHMM-class.html#start_insertion
csb.bio.hmm.ProfileHMM.psipred	csb.bio.hmm.ProfileHMM-class.html#psipred
csb.bio.hmm.ProfileHMM.emission_pseudocounts	csb.bio.hmm.ProfileHMM-class.html#emission_pseudocounts
csb.bio.hmm.ProfileHMM.evd	csb.bio.hmm.ProfileHMM-class.html#evd
csb.bio.hmm.ProfileHMM.convert_scores	csb.bio.hmm.ProfileHMM-class.html#convert_scores
csb.bio.hmm.ProfileHMM.consensus	csb.bio.hmm.ProfileHMM-class.html#consensus
csb.bio.hmm.ProfileHMM.length	csb.bio.hmm.ProfileHMM-class.html#length
csb.bio.hmm.ProfileHMM.add_emission_pseudocounts	csb.bio.hmm.ProfileHMM-class.html#add_emission_pseudocounts
csb.bio.hmm.ProfileHMM.add_transition_pseudocounts	csb.bio.hmm.ProfileHMM-class.html#add_transition_pseudocounts
csb.bio.hmm.ProfileHMM.dssp	csb.bio.hmm.ProfileHMM-class.html#dssp
csb.bio.hmm.ProfileHMM.has_structure	csb.bio.hmm.ProfileHMM-class.html#has_structure
csb.bio.hmm.ProfileHMMSegment	csb.bio.hmm.ProfileHMMSegment-class.html
csb.bio.hmm.ProfileHMMSegment.source_start	csb.bio.hmm.ProfileHMMSegment-class.html#source_start
csb.bio.hmm.ProfileHMM.serialize	csb.bio.hmm.ProfileHMM-class.html#serialize
csb.bio.hmm.ProfileHMM.transition_pseudocounts	csb.bio.hmm.ProfileHMM-class.html#transition_pseudocounts
csb.bio.hmm.ProfileHMM.subregion	csb.bio.hmm.ProfileHMM-class.html#subregion
csb.bio.hmm.ProfileHMM._convert	csb.bio.hmm.ProfileHMM-class.html#_convert
csb.bio.hmm.ProfileHMM._assign_secstructure	csb.bio.hmm.ProfileHMM-class.html#_assign_secstructure
csb.bio.hmm.ProfileHMM.effective_matches	csb.bio.hmm.ProfileHMM-class.html#effective_matches
csb.bio.hmm.ProfileHMM.id	csb.bio.hmm.ProfileHMM-class.html#id
csb.bio.hmm.ProfileHMM.alignment	csb.bio.hmm.ProfileHMM-class.html#alignment
csb.bio.hmm.ProfileHMM.layers	csb.bio.hmm.ProfileHMM-class.html#layers
csb.bio.hmm.ProfileHMM.logbase	csb.bio.hmm.ProfileHMM-class.html#logbase
csb.bio.hmm.ProfileHMM.scale	csb.bio.hmm.ProfileHMM-class.html#scale
csb.bio.hmm.ProfileHMM.end	csb.bio.hmm.ProfileHMM-class.html#end
csb.bio.hmm.ProfileHMM.chain	csb.bio.hmm.ProfileHMM-class.html#chain
csb.bio.hmm.ProfileHMM.emission_profile	csb.bio.hmm.ProfileHMM-class.html#emission_profile
csb.bio.hmm.ProfileHMMSegment._build_graph	csb.bio.hmm.ProfileHMMSegment-class.html#_build_graph
csb.bio.hmm.ProfileHMM.score_units	csb.bio.hmm.ProfileHMM-class.html#score_units
csb.bio.hmm.ProfileHMM.start	csb.bio.hmm.ProfileHMM-class.html#start
csb.bio.hmm.ProfileHMM.version	csb.bio.hmm.ProfileHMM-class.html#version
csb.bio.hmm.ProfileHMMSegment.__init__	csb.bio.hmm.ProfileHMMSegment-class.html#__init__
csb.bio.hmm.ProfileHMM.dssp_solvent	csb.bio.hmm.ProfileHMM-class.html#dssp_solvent
csb.bio.hmm.ProfileHMM.family	csb.bio.hmm.ProfileHMM-class.html#family
csb.bio.hmm.ProfileHMMSegment.source_end	csb.bio.hmm.ProfileHMMSegment-class.html#source_end
csb.bio.hmm.ProfileHMM.all_layers	csb.bio.hmm.ProfileHMM-class.html#all_layers
csb.bio.hmm.ProfileHMM.to_hmm	csb.bio.hmm.ProfileHMM-class.html#to_hmm
csb.bio.hmm.ProfileHMM.residues	csb.bio.hmm.ProfileHMM-class.html#residues
csb.bio.hmm.ProfileHMM.emission_similarity	csb.bio.hmm.ProfileHMM-class.html#emission_similarity
csb.bio.hmm.ProfileHMM.segment	csb.bio.hmm.ProfileHMM-class.html#segment
csb.bio.hmm.ProfileHMM.structure	csb.bio.hmm.ProfileHMM-class.html#structure
csb.bio.hmm.ProfileHMM.pseudocounts	csb.bio.hmm.ProfileHMM-class.html#pseudocounts
csb.bio.hmm.ProfileHMM.name	csb.bio.hmm.ProfileHMM-class.html#name
csb.bio.hmm.ProfileHMM.deserialize	csb.bio.hmm.ProfileHMM-class.html#deserialize
csb.bio.hmm.ProfileHMM.start_insertion	csb.bio.hmm.ProfileHMM-class.html#start_insertion
csb.bio.hmm.ProfileHMM.psipred	csb.bio.hmm.ProfileHMM-class.html#psipred
csb.bio.hmm.ProfileHMM.emission_pseudocounts	csb.bio.hmm.ProfileHMM-class.html#emission_pseudocounts
csb.bio.hmm.ProfileHMM.evd	csb.bio.hmm.ProfileHMM-class.html#evd
csb.bio.hmm.ProfileHMM.convert_scores	csb.bio.hmm.ProfileHMM-class.html#convert_scores
csb.bio.hmm.ProfileHMM.consensus	csb.bio.hmm.ProfileHMM-class.html#consensus
csb.bio.hmm.ProfileHMM.length	csb.bio.hmm.ProfileHMM-class.html#length
csb.bio.hmm.ProfileHMM.add_emission_pseudocounts	csb.bio.hmm.ProfileHMM-class.html#add_emission_pseudocounts
csb.bio.hmm.ProfileHMM.add_transition_pseudocounts	csb.bio.hmm.ProfileHMM-class.html#add_transition_pseudocounts
csb.bio.hmm.ProfileHMM.dssp	csb.bio.hmm.ProfileHMM-class.html#dssp
csb.bio.hmm.ProfileHMM.has_structure	csb.bio.hmm.ProfileHMM-class.html#has_structure
csb.bio.hmm.ProfileLength	csb.bio.hmm.ProfileLength-class.html
csb.bio.hmm.ProfileLength.__init__	csb.bio.hmm.ProfileLength-class.html#__init__
csb.bio.hmm.ScoreUnits	csb.bio.hmm.ScoreUnits-class.html
csb.bio.hmm.ScoreUnits.LogScales	csb.bio.hmm.ScoreUnits-class.html#LogScales
csb.bio.hmm.ScoreUnits.Probability	csb.bio.hmm.ScoreUnits-class.html#Probability
csb.bio.hmm.ScoreUnits._names	csb.bio.hmm.ScoreUnits-class.html#_names
csb.bio.hmm.ScoreUnits._namesci	csb.bio.hmm.ScoreUnits-class.html#_namesci
csb.bio.hmm.ScoreUnits._name	csb.bio.hmm.ScoreUnits-class.html#_name
csb.bio.hmm.ScoreUnits._valuesci	csb.bio.hmm.ScoreUnits-class.html#_valuesci
csb.bio.hmm.ScoreUnits._values	csb.bio.hmm.ScoreUnits-class.html#_values
csb.core.enum.__init__	csb.core.enum-class.html#__init__
csb.bio.hmm.State	csb.bio.hmm.State-class.html
csb.bio.hmm.State.silent	csb.bio.hmm.State-class.html#silent
csb.bio.hmm.State.emission	csb.bio.hmm.State-class.html#emission
csb.bio.hmm.State.rank	csb.bio.hmm.State-class.html#rank
csb.bio.hmm.State.__repr__	csb.bio.hmm.State-class.html#__repr__
csb.bio.hmm.State.background	csb.bio.hmm.State-class.html#background
csb.bio.hmm.State.transitions	csb.bio.hmm.State-class.html#transitions
csb.bio.hmm.State.type	csb.bio.hmm.State-class.html#type
csb.bio.hmm.State.__init__	csb.bio.hmm.State-class.html#__init__
csb.bio.hmm.StateExistsError	csb.bio.hmm.StateExistsError-class.html
csb.bio.hmm.StateFactory	csb.bio.hmm.StateFactory-class.html
csb.bio.hmm.StateFactory.create_match	csb.bio.hmm.StateFactory-class.html#create_match
csb.bio.hmm.StateFactory.create_insertion	csb.bio.hmm.StateFactory-class.html#create_insertion
csb.bio.hmm.StateFactory.__init__	csb.bio.hmm.StateFactory-class.html#__init__
csb.bio.hmm.StateFactory.create_deletion	csb.bio.hmm.StateFactory-class.html#create_deletion
csb.bio.hmm.StateNotFoundError	csb.bio.hmm.StateNotFoundError-class.html
csb.bio.hmm.States	csb.bio.hmm.States-class.html
csb.bio.hmm.States.End	csb.bio.hmm.States-class.html#End
csb.bio.hmm.States.Start	csb.bio.hmm.States-class.html#Start
csb.bio.hmm.States.Deletion	csb.bio.hmm.States-class.html#Deletion
csb.core.enum.__init__	csb.core.enum-class.html#__init__
csb.bio.hmm.States._namesci	csb.bio.hmm.States-class.html#_namesci
csb.bio.hmm.States._valuesci	csb.bio.hmm.States-class.html#_valuesci
csb.bio.hmm.States.Match	csb.bio.hmm.States-class.html#Match
csb.bio.hmm.States.Insertion	csb.bio.hmm.States-class.html#Insertion
csb.bio.hmm.States._names	csb.bio.hmm.States-class.html#_names
csb.bio.hmm.States._name	csb.bio.hmm.States-class.html#_name
csb.bio.hmm.States._values	csb.bio.hmm.States-class.html#_values
csb.bio.hmm.Transition	csb.bio.hmm.Transition-class.html
csb.bio.hmm.Transition.predecessor	csb.bio.hmm.Transition-class.html#predecessor
csb.bio.hmm.Transition.probability	csb.bio.hmm.Transition-class.html#probability
csb.bio.hmm.Transition.__str__	csb.bio.hmm.Transition-class.html#__str__
csb.bio.hmm.Transition.type	csb.bio.hmm.Transition-class.html#type
csb.bio.hmm.Transition.__init__	csb.bio.hmm.Transition-class.html#__init__
csb.bio.hmm.Transition.successor	csb.bio.hmm.Transition-class.html#successor
csb.bio.hmm.TransitionExistsError	csb.bio.hmm.TransitionExistsError-class.html
csb.bio.hmm.TransitionNotFoundError	csb.bio.hmm.TransitionNotFoundError-class.html
csb.bio.hmm.TransitionTable	csb.bio.hmm.TransitionTable-class.html
csb.bio.hmm.TransitionTable._exception	csb.bio.hmm.TransitionTable-class.html#_exception
csb.bio.hmm.TransitionTable.set	csb.bio.hmm.TransitionTable-class.html#set
csb.core.DictionaryContainer._update	csb.core.DictionaryContainer-class.html#_update
csb.bio.hmm.TransitionTable.append	csb.bio.hmm.TransitionTable-class.html#append
csb.core.BaseDictionaryContainer.__contains__	csb.core.BaseDictionaryContainer-class.html#__contains__
csb.core.BaseDictionaryContainer._getinternal	csb.core.BaseDictionaryContainer-class.html#_getinternal
csb.core.DictionaryContainer._remove	csb.core.DictionaryContainer-class.html#_remove
csb.bio.hmm.TransitionTable.__init__	csb.bio.hmm.TransitionTable-class.html#__init__
csb.core.BaseDictionaryContainer._set_items	csb.core.BaseDictionaryContainer-class.html#_set_items
csb.core.BaseDictionaryContainer._update_items	csb.core.BaseDictionaryContainer-class.html#_update_items
csb.core.BaseDictionaryContainer.__len__	csb.core.BaseDictionaryContainer-class.html#__len__
csb.core.BaseDictionaryContainer.__getitem__	csb.core.BaseDictionaryContainer-class.html#__getitem__
csb.core.BaseDictionaryContainer.keys	csb.core.BaseDictionaryContainer-class.html#keys
csb.bio.hmm.TransitionTable.update	csb.bio.hmm.TransitionTable-class.html#update
csb.core.BaseDictionaryContainer.__iter__	csb.core.BaseDictionaryContainer-class.html#__iter__
csb.core.BaseDictionaryContainer.__bool__	csb.core.BaseDictionaryContainer-class.html#__bool__
csb.core.BaseDictionaryContainer._append_item	csb.core.BaseDictionaryContainer-class.html#_append_item
csb.core.BaseDictionaryContainer.__nonzero__	csb.core.BaseDictionaryContainer-class.html#__nonzero__
csb.core.BaseDictionaryContainer.length	csb.core.BaseDictionaryContainer-class.html#length
csb.core.BaseDictionaryContainer._remove_item	csb.core.BaseDictionaryContainer-class.html#_remove_item
csb.core.BaseDictionaryContainer.__repr__	csb.core.BaseDictionaryContainer-class.html#__repr__
csb.core.DictionaryContainer._set	csb.core.DictionaryContainer-class.html#_set
csb.bio.hmm.TransitionType	csb.bio.hmm.TransitionType-class.html
csb.bio.hmm.TransitionType.__repr__	csb.bio.hmm.TransitionType-class.html#__repr__
csb.bio.hmm.TransitionType.__init__	csb.bio.hmm.TransitionType-class.html#__init__
csb.bio.hmm.UnobservableStateError	csb.bio.hmm.UnobservableStateError-class.html
csb.bio.hmm.pseudocounts.PseudocountBuilder	csb.bio.hmm.pseudocounts.PseudocountBuilder-class.html
csb.bio.hmm.pseudocounts.PseudocountBuilder.hmm	csb.bio.hmm.pseudocounts.PseudocountBuilder-class.html#hmm
csb.bio.hmm.pseudocounts.PseudocountBuilder.add_emission_pseudocounts	csb.bio.hmm.pseudocounts.PseudocountBuilder-class.html#add_emission_pseudocounts
csb.bio.hmm.pseudocounts.PseudocountBuilder.add_transition_pseudocounts	csb.bio.hmm.pseudocounts.PseudocountBuilder-class.html#add_transition_pseudocounts
csb.bio.hmm.pseudocounts.PseudocountBuilder.__init__	csb.bio.hmm.pseudocounts.PseudocountBuilder-class.html#__init__
csb.bio.io.clans.Clans	csb.bio.io.clans.Clans-class.html
csb.bio.io.clans.Clans.get_entry	csb.bio.io.clans.Clans-class.html#get_entry
csb.bio.io.clans.Clans.__str__	csb.bio.io.clans.Clans-class.html#__str__
csb.bio.io.clans.Clans.restrict	csb.bio.io.clans.Clans-class.html#restrict
csb.bio.io.clans.Clans.rotmtx	csb.bio.io.clans.Clans-class.html#rotmtx
csb.bio.io.clans.Clans.__init__	csb.bio.io.clans.Clans-class.html#__init__
csb.bio.io.clans.Clans.remove_entry_by_name	csb.bio.io.clans.Clans-class.html#remove_entry_by_name
csb.bio.io.clans.Clans.append_groups_from	csb.bio.io.clans.Clans-class.html#append_groups_from
csb.bio.io.clans.Clans.restrict_to_max_pvalue	csb.bio.io.clans.Clans-class.html#restrict_to_max_pvalue
csb.bio.io.clans.Clans._update_index	csb.bio.io.clans.Clans-class.html#_update_index
csb.bio.io.clans.Clans.set_default_rotmtx	csb.bio.io.clans.Clans-class.html#set_default_rotmtx
csb.bio.io.clans.Clans.filename	csb.bio.io.clans.Clans-class.html#filename
csb.bio.io.clans.Clans.write	csb.bio.io.clans.Clans-class.html#write
csb.bio.io.clans.Clans.params	csb.bio.io.clans.Clans-class.html#params
csb.bio.io.clans.Clans.seqgroups	csb.bio.io.clans.Clans-class.html#seqgroups
csb.bio.io.clans.Clans.__len__	csb.bio.io.clans.Clans-class.html#__len__
csb.bio.io.clans.Clans.sort	csb.bio.io.clans.Clans-class.html#sort
csb.bio.io.clans.Clans.__getitem__	csb.bio.io.clans.Clans-class.html#__getitem__
csb.bio.io.clans.Clans.__setitem__	csb.bio.io.clans.Clans-class.html#__setitem__
csb.bio.io.clans.Clans.entries	csb.bio.io.clans.Clans-class.html#entries
csb.bio.io.clans.Clans.initialize	csb.bio.io.clans.Clans-class.html#initialize
csb.bio.io.clans.Clans.remove_entry	csb.bio.io.clans.Clans-class.html#remove_entry
csb.bio.io.clans.Clans.remove_group	csb.bio.io.clans.Clans-class.html#remove_group
csb.bio.io.clans.Clans.add_entry	csb.bio.io.clans.Clans-class.html#add_entry
csb.bio.io.clans.Clans.add_group	csb.bio.io.clans.Clans-class.html#add_group
csb.bio.io.clans.Clans.__repr__	csb.bio.io.clans.Clans-class.html#__repr__
csb.bio.io.clans.ClansEntry	csb.bio.io.clans.ClansEntry-class.html
csb.bio.io.clans.ClansEntry.groups	csb.bio.io.clans.ClansEntry-class.html#groups
csb.bio.io.clans.ClansEntry.seq	csb.bio.io.clans.ClansEntry-class.html#seq
csb.bio.io.clans.ClansEntry._get_unique_id	csb.bio.io.clans.ClansEntry-class.html#_get_unique_id
csb.bio.io.clans.ClansEntry.__init__	csb.bio.io.clans.ClansEntry-class.html#__init__
csb.bio.io.clans.ClansEntry.parent	csb.bio.io.clans.ClansEntry-class.html#parent
csb.bio.io.clans.ClansEntry.output_string_pos	csb.bio.io.clans.ClansEntry-class.html#output_string_pos
csb.bio.io.clans.ClansEntry.hsp	csb.bio.io.clans.ClansEntry-class.html#hsp
csb.bio.io.clans.ClansEntry.remove_hsp	csb.bio.io.clans.ClansEntry-class.html#remove_hsp
csb.bio.io.clans.ClansEntry.initialize_coordinates	csb.bio.io.clans.ClansEntry-class.html#initialize_coordinates
csb.bio.io.clans.ClansEntry.name	csb.bio.io.clans.ClansEntry-class.html#name
csb.bio.io.clans.ClansEntry.output_string_hsp	csb.bio.io.clans.ClansEntry-class.html#output_string_hsp
csb.bio.io.clans.ClansEntry.output_string_seq	csb.bio.io.clans.ClansEntry-class.html#output_string_seq
csb.bio.io.clans.ClansEntry.get_id	csb.bio.io.clans.ClansEntry-class.html#get_id
csb.bio.io.clans.ClansEntry.add_hsp	csb.bio.io.clans.ClansEntry-class.html#add_hsp
csb.bio.io.clans.ClansEntry.coords	csb.bio.io.clans.ClansEntry-class.html#coords
csb.bio.io.clans.ClansEntry.__repr__	csb.bio.io.clans.ClansEntry-class.html#__repr__
csb.bio.io.clans.ClansEntryCollection	csb.bio.io.clans.ClansEntryCollection-class.html
csb.core.BaseCollectionContainer._exception	csb.core.BaseCollectionContainer-class.html#_exception
csb.core.BaseCollectionContainer.last_index	csb.core.BaseCollectionContainer-class.html#last_index
csb.bio.io.clans.ClansEntryCollection.__init__	csb.bio.io.clans.ClansEntryCollection-class.html#__init__
csb.core.BaseCollectionContainer.__contains__	csb.core.BaseCollectionContainer-class.html#__contains__
csb.core.BaseCollectionContainer._getinternal	csb.core.BaseCollectionContainer-class.html#_getinternal
csb.core.BaseCollectionContainer._update_items	csb.core.BaseCollectionContainer-class.html#_update_items
csb.core.BaseCollectionContainer.__len__	csb.core.BaseCollectionContainer-class.html#__len__
csb.core.BaseCollectionContainer.__getitem__	csb.core.BaseCollectionContainer-class.html#__getitem__
csb.core.BaseCollectionContainer.__iter__	csb.core.BaseCollectionContainer-class.html#__iter__
csb.core.BaseCollectionContainer.__bool__	csb.core.BaseCollectionContainer-class.html#__bool__
csb.core.BaseCollectionContainer.start_index	csb.core.BaseCollectionContainer-class.html#start_index
csb.core.BaseCollectionContainer._append_item	csb.core.BaseCollectionContainer-class.html#_append_item
csb.core.BaseCollectionContainer.__nonzero__	csb.core.BaseCollectionContainer-class.html#__nonzero__
csb.bio.io.clans.ClansEntryCollection._sort	csb.bio.io.clans.ClansEntryCollection-class.html#_sort
csb.core.BaseCollectionContainer.length	csb.core.BaseCollectionContainer-class.html#length
csb.bio.io.clans.ClansEntryCollection._remove_item	csb.bio.io.clans.ClansEntryCollection-class.html#_remove_item
csb.core.BaseCollectionContainer.__repr__	csb.core.BaseCollectionContainer-class.html#__repr__
csb.bio.io.clans.ClansFileBuilder	csb.bio.io.clans.ClansFileBuilder-class.html
csb.bio.io.clans.ClansFileBuilder.__metaclass__	abc.ABCMeta-class.html
csb.bio.io.clans.ClansFileBuilder.add_pos_block	csb.bio.io.clans.ClansFileBuilder-class.html#add_pos_block
csb.bio.io.clans.ClansFileBuilder.add_seq_block	csb.bio.io.clans.ClansFileBuilder-class.html#add_seq_block
csb.bio.io.clans.ClansFileBuilder.writeline	csb.bio.io.clans.ClansFileBuilder-class.html#writeline
csb.bio.io.clans.ClansFileBuilder.add_rotmtx_block	csb.bio.io.clans.ClansFileBuilder-class.html#add_rotmtx_block
csb.bio.io.clans.ClansFileBuilder._abc_cache	csb.bio.io.clans.ClansFileBuilder-class.html#_abc_cache
csb.bio.io.clans.ClansFileBuilder.add_param_block	csb.bio.io.clans.ClansFileBuilder-class.html#add_param_block
csb.bio.io.clans.ClansFileBuilder.__abstractmethods__	csb.bio.io.clans.ClansFileBuilder-class.html#__abstractmethods__
csb.bio.io.clans.ClansFileBuilder.write	csb.bio.io.clans.ClansFileBuilder-class.html#write
csb.bio.io.clans.ClansFileBuilder.__init__	csb.bio.io.clans.ClansFileBuilder-class.html#__init__
csb.bio.io.clans.ClansFileBuilder.add_hsp_block	csb.bio.io.clans.ClansFileBuilder-class.html#add_hsp_block
csb.bio.io.clans.ClansFileBuilder._abc_negative_cache	csb.bio.io.clans.ClansFileBuilder-class.html#_abc_negative_cache
csb.bio.io.clans.ClansFileBuilder.add_seqgroups_block	csb.bio.io.clans.ClansFileBuilder-class.html#add_seqgroups_block
csb.bio.io.clans.ClansFileBuilder._abc_negative_cache_version	csb.bio.io.clans.ClansFileBuilder-class.html#_abc_negative_cache_version
csb.bio.io.clans.ClansFileBuilder.output	csb.bio.io.clans.ClansFileBuilder-class.html#output
csb.bio.io.clans.ClansFileBuilder._abc_registry	csb.bio.io.clans.ClansFileBuilder-class.html#_abc_registry
csb.bio.io.clans.ClansFileWriter	csb.bio.io.clans.ClansFileWriter-class.html
csb.bio.io.clans.ClansFileBuilder.__metaclass__	abc.ABCMeta-class.html
csb.bio.io.clans.ClansFileWriter.add_pos_block	csb.bio.io.clans.ClansFileWriter-class.html#add_pos_block
csb.bio.io.clans.ClansFileWriter.serialize	csb.bio.io.clans.ClansFileWriter-class.html#serialize
csb.bio.io.clans.ClansFileWriter.add_seq_block	csb.bio.io.clans.ClansFileWriter-class.html#add_seq_block
csb.bio.io.clans.ClansFileBuilder.writeline	csb.bio.io.clans.ClansFileBuilder-class.html#writeline
csb.bio.io.clans.ClansFileWriter.add_rotmtx_block	csb.bio.io.clans.ClansFileWriter-class.html#add_rotmtx_block
csb.bio.io.clans.ClansFileBuilder._abc_cache	csb.bio.io.clans.ClansFileBuilder-class.html#_abc_cache
csb.bio.io.clans.ClansFileWriter.add_sequences_line	csb.bio.io.clans.ClansFileWriter-class.html#add_sequences_line
csb.bio.io.clans.ClansFileWriter.add_param_block	csb.bio.io.clans.ClansFileWriter-class.html#add_param_block
csb.bio.io.clans.ClansFileWriter.__abstractmethods__	csb.bio.io.clans.ClansFileWriter-class.html#__abstractmethods__
csb.bio.io.clans.ClansFileBuilder.write	csb.bio.io.clans.ClansFileBuilder-class.html#write
csb.bio.io.clans.ClansFileWriter.__init__	csb.bio.io.clans.ClansFileWriter-class.html#__init__
csb.bio.io.clans.ClansFileWriter.add_hsp_block	csb.bio.io.clans.ClansFileWriter-class.html#add_hsp_block
csb.bio.io.clans.ClansFileBuilder._abc_negative_cache	csb.bio.io.clans.ClansFileBuilder-class.html#_abc_negative_cache
csb.bio.io.clans.ClansFileWriter.add_seqgroups_block	csb.bio.io.clans.ClansFileWriter-class.html#add_seqgroups_block
csb.bio.io.clans.ClansFileBuilder._abc_negative_cache_version	csb.bio.io.clans.ClansFileBuilder-class.html#_abc_negative_cache_version
csb.bio.io.clans.ClansFileBuilder.output	csb.bio.io.clans.ClansFileBuilder-class.html#output
csb.bio.io.clans.ClansFileBuilder._abc_registry	csb.bio.io.clans.ClansFileBuilder-class.html#_abc_registry
csb.bio.io.clans.ClansParams	csb.bio.io.clans.ClansParams-class.html
csb.bio.io.clans.ClansParams.showinfo	csb.bio.io.clans.ClansParams-class.html#showinfo
csb.bio.io.clans.ClansParams.attfactor	csb.bio.io.clans.ClansParams-class.html#attfactor
csb.bio.io.clans.ClansParams.pval	csb.bio.io.clans.ClansParams-class.html#pval
csb.bio.io.clans.ClansParams.colors	csb.bio.io.clans.ClansParams-class.html#colors
csb.bio.io.clans.ClansParams.minattract	csb.bio.io.clans.ClansParams-class.html#minattract
csb.bio.io.clans.ClansParams.__init__	csb.bio.io.clans.ClansParams-class.html#__init__
csb.bio.io.clans.ClansParams.dampening	csb.bio.io.clans.ClansParams-class.html#dampening
csb.bio.io.clans.ClansParams.repfactor	csb.bio.io.clans.ClansParams-class.html#repfactor
csb.bio.io.clans.ClansParams.ovalsize	csb.bio.io.clans.ClansParams-class.html#ovalsize
csb.bio.io.clans.ClansParams.repvalpow	csb.bio.io.clans.ClansParams-class.html#repvalpow
csb.bio.io.clans.ClansParams.cooling	csb.bio.io.clans.ClansParams-class.html#cooling
csb.bio.io.clans.ClansParams.maxmove	csb.bio.io.clans.ClansParams-class.html#maxmove
csb.bio.io.clans.ClansParams.avgfoldchange	csb.bio.io.clans.ClansParams-class.html#avgfoldchange
csb.bio.io.clans.ClansParams.cluster2d	csb.bio.io.clans.ClansParams-class.html#cluster2d
csb.bio.io.clans.ClansParams.usescval	csb.bio.io.clans.ClansParams-class.html#usescval
csb.bio.io.clans.ClansParams._to_clans_param_block	csb.bio.io.clans.ClansParams-class.html#_to_clans_param_block
csb.bio.io.clans.ClansParams.formatdbpath	csb.bio.io.clans.ClansParams-class.html#formatdbpath
csb.bio.io.clans.ClansParams.currcool	csb.bio.io.clans.ClansParams-class.html#currcool
csb.bio.io.clans.ClansParams.usefoldchange	csb.bio.io.clans.ClansParams-class.html#usefoldchange
csb.bio.io.clans.ClansParams.set_default_params	csb.bio.io.clans.ClansParams-class.html#set_default_params
csb.bio.io.clans.ClansParams.blastpath	csb.bio.io.clans.ClansParams-class.html#blastpath
csb.bio.io.clans.ClansParams.dotsize	csb.bio.io.clans.ClansParams-class.html#dotsize
csb.bio.io.clans.ClansParams.attvalpow	csb.bio.io.clans.ClansParams-class.html#attvalpow
csb.bio.io.clans.ClansParams._DEFAULTS	csb.bio.io.clans.ClansParams-class.html#_DEFAULTS
csb.bio.io.clans.ClansParams.zoom	csb.bio.io.clans.ClansParams-class.html#zoom
csb.bio.io.clans.ClansParams.complexatt	csb.bio.io.clans.ClansParams-class.html#complexatt
csb.bio.io.clans.ClansParams.groupsize	csb.bio.io.clans.ClansParams-class.html#groupsize
csb.bio.io.clans.ClansParser	csb.bio.io.clans.ClansParser-class.html
csb.bio.io.clans.ClansParser.__str__	csb.bio.io.clans.ClansParser-class.html#__str__
csb.bio.io.clans.ClansParser.__init__	csb.bio.io.clans.ClansParser-class.html#__init__
csb.bio.io.clans.ClansParser._parse_mtx	csb.bio.io.clans.ClansParser-class.html#_parse_mtx
csb.bio.io.clans.ClansParser._parse_hsp_att	csb.bio.io.clans.ClansParser-class.html#_parse_hsp_att
csb.bio.io.clans.ClansParser.parse_file	csb.bio.io.clans.ClansParser-class.html#parse_file
csb.bio.io.clans.ClansParser._parse_param	csb.bio.io.clans.ClansParser-class.html#_parse_param
csb.bio.io.clans.ClansParser._read_block_dict	csb.bio.io.clans.ClansParser-class.html#_read_block_dict
csb.bio.io.clans.ClansParser._parse_pos	csb.bio.io.clans.ClansParser-class.html#_parse_pos
csb.bio.io.clans.ClansParser._parse_seqgroups	csb.bio.io.clans.ClansParser-class.html#_parse_seqgroups
csb.bio.io.clans.ClansParser.clans_instance	csb.bio.io.clans.ClansParser-class.html#clans_instance
csb.bio.io.clans.ClansParser._parse_rotmtx	csb.bio.io.clans.ClansParser-class.html#_parse_rotmtx
csb.bio.io.clans.ClansParser._parse_seq	csb.bio.io.clans.ClansParser-class.html#_parse_seq
csb.bio.io.clans.ClansParser.__repr__	csb.bio.io.clans.ClansParser-class.html#__repr__
csb.bio.io.clans.ClansSeqgroup	csb.bio.io.clans.ClansSeqgroup-class.html
csb.bio.io.clans.ClansSeqgroup.color	csb.bio.io.clans.ClansSeqgroup-class.html#color
csb.bio.io.clans.ClansSeqgroup.__init__	csb.bio.io.clans.ClansSeqgroup-class.html#__init__
csb.bio.io.clans.ClansSeqgroup.size	csb.bio.io.clans.ClansSeqgroup-class.html#size
csb.bio.io.clans.ClansSeqgroup.hide	csb.bio.io.clans.ClansSeqgroup-class.html#hide
csb.bio.io.clans.ClansSeqgroup.output_string	csb.bio.io.clans.ClansSeqgroup-class.html#output_string
csb.bio.io.clans.ClansSeqgroup.add	csb.bio.io.clans.ClansSeqgroup-class.html#add
csb.bio.io.clans.ClansSeqgroup.type	csb.bio.io.clans.ClansSeqgroup-class.html#type
csb.bio.io.clans.ClansSeqgroup.__len__	csb.bio.io.clans.ClansSeqgroup-class.html#__len__
csb.bio.io.clans.ClansSeqgroup.is_empty	csb.bio.io.clans.ClansSeqgroup-class.html#is_empty
csb.bio.io.clans.ClansSeqgroup.members	csb.bio.io.clans.ClansSeqgroup-class.html#members
csb.bio.io.clans.ClansSeqgroup.name	csb.bio.io.clans.ClansSeqgroup-class.html#name
csb.bio.io.clans.ClansSeqgroup.remove	csb.bio.io.clans.ClansSeqgroup-class.html#remove
csb.bio.io.clans.ClansSeqgroup.__repr__	csb.bio.io.clans.ClansSeqgroup-class.html#__repr__
csb.bio.io.clans.ClansSeqgroupCollection	csb.bio.io.clans.ClansSeqgroupCollection-class.html
csb.core.BaseCollectionContainer._exception	csb.core.BaseCollectionContainer-class.html#_exception
csb.core.BaseCollectionContainer.last_index	csb.core.BaseCollectionContainer-class.html#last_index
csb.bio.io.clans.ClansSeqgroupCollection.__init__	csb.bio.io.clans.ClansSeqgroupCollection-class.html#__init__
csb.core.BaseCollectionContainer.__contains__	csb.core.BaseCollectionContainer-class.html#__contains__
csb.core.BaseCollectionContainer._getinternal	csb.core.BaseCollectionContainer-class.html#_getinternal
csb.core.BaseCollectionContainer._update_items	csb.core.BaseCollectionContainer-class.html#_update_items
csb.core.BaseCollectionContainer.__len__	csb.core.BaseCollectionContainer-class.html#__len__
csb.core.BaseCollectionContainer.__getitem__	csb.core.BaseCollectionContainer-class.html#__getitem__
csb.core.BaseCollectionContainer.__iter__	csb.core.BaseCollectionContainer-class.html#__iter__
csb.core.BaseCollectionContainer.__bool__	csb.core.BaseCollectionContainer-class.html#__bool__
csb.core.BaseCollectionContainer.start_index	csb.core.BaseCollectionContainer-class.html#start_index
csb.core.BaseCollectionContainer._append_item	csb.core.BaseCollectionContainer-class.html#_append_item
csb.core.BaseCollectionContainer.__nonzero__	csb.core.BaseCollectionContainer-class.html#__nonzero__
csb.core.BaseCollectionContainer._sort	csb.core.BaseCollectionContainer-class.html#_sort
csb.core.BaseCollectionContainer.length	csb.core.BaseCollectionContainer-class.html#length
csb.bio.io.clans.ClansSeqgroupCollection._remove_item	csb.bio.io.clans.ClansSeqgroupCollection-class.html#_remove_item
csb.core.BaseCollectionContainer.__repr__	csb.core.BaseCollectionContainer-class.html#__repr__
csb.bio.io.clans.Color	csb.bio.io.clans.Color-class.html
csb.bio.io.clans.Color.a	csb.bio.io.clans.Color-class.html#a
csb.bio.io.clans.Color.b	csb.bio.io.clans.Color-class.html#b
csb.bio.io.clans.Color.g	csb.bio.io.clans.Color-class.html#g
csb.bio.io.clans.Color.__str__	csb.bio.io.clans.Color-class.html#__str__
csb.bio.io.clans.Color.r	csb.bio.io.clans.Color-class.html#r
csb.bio.io.clans.Color.__repr__	csb.bio.io.clans.Color-class.html#__repr__
csb.bio.io.clans.Color.to_clans_color	csb.bio.io.clans.Color-class.html#to_clans_color
csb.bio.io.clans.Color.from_string	csb.bio.io.clans.Color-class.html#from_string
csb.bio.io.clans.Color.__init__	csb.bio.io.clans.Color-class.html#__init__
csb.bio.io.clans.DuplicateEntryError	csb.bio.io.clans.DuplicateEntryError-class.html
csb.bio.io.clans.DuplicateEntryNameError	csb.bio.io.clans.DuplicateEntryNameError-class.html
csb.bio.io.clans.MissingBlockError	csb.bio.io.clans.MissingBlockError-class.html
csb.bio.io.clans.UnknownTagError	csb.bio.io.clans.UnknownTagError-class.html
csb.bio.io.cs.ChemShift3Reader	csb.bio.io.cs.ChemShift3Reader-class.html
csb.bio.io.cs.ChemShiftReader.RESIDUE	csb.bio.io.cs.ChemShiftReader-class.html#RESIDUE
csb.bio.io.cs.ChemShiftReader.SHIFT	csb.bio.io.cs.ChemShiftReader-class.html#SHIFT
csb.bio.io.cs.ChemShiftReader.RANK	csb.bio.io.cs.ChemShiftReader-class.html#RANK
csb.bio.io.cs.ChemShift3Reader.ATOM3	csb.bio.io.cs.ChemShift3Reader-class.html#ATOM3
csb.bio.io.cs.ChemShift3Reader.SHIFT3	csb.bio.io.cs.ChemShift3Reader-class.html#SHIFT3
csb.bio.io.cs.ChemShiftReader.read_file	csb.bio.io.cs.ChemShiftReader-class.html#read_file
csb.bio.io.cs.ChemShiftReader.__init__	csb.bio.io.cs.ChemShiftReader-class.html#__init__
csb.bio.io.cs.ChemShiftReader.guess	csb.bio.io.cs.ChemShiftReader-class.html#guess
csb.bio.io.cs.ChemShift3Reader.RANK3	csb.bio.io.cs.ChemShift3Reader-class.html#RANK3
csb.bio.io.cs.ChemShiftReader.FRAME	csb.bio.io.cs.ChemShiftReader-class.html#FRAME
csb.bio.io.cs.ChemShiftReader.read_shifts	csb.bio.io.cs.ChemShiftReader-class.html#read_shifts
csb.bio.io.cs.ChemShiftReader._scroll	csb.bio.io.cs.ChemShiftReader-class.html#_scroll
csb.bio.io.cs.ChemShiftReader.ELEMENT	csb.bio.io.cs.ChemShiftReader-class.html#ELEMENT
csb.bio.io.cs.ChemShiftReader.ATOM	csb.bio.io.cs.ChemShiftReader-class.html#ATOM
csb.bio.io.cs.ChemShift3Reader.ELEMENT3	csb.bio.io.cs.ChemShift3Reader-class.html#ELEMENT3
csb.bio.io.cs.ChemShift3Reader._create_shift	csb.bio.io.cs.ChemShift3Reader-class.html#_create_shift
csb.bio.io.cs.ChemShift3Reader.RESIDUE3	csb.bio.io.cs.ChemShift3Reader-class.html#RESIDUE3
csb.bio.io.cs.ChemShiftReader.create	csb.bio.io.cs.ChemShiftReader-class.html#create
csb.bio.io.cs.ChemShiftFormatError	csb.bio.io.cs.ChemShiftFormatError-class.html
csb.bio.io.cs.ChemShiftReader	csb.bio.io.cs.ChemShiftReader-class.html
csb.bio.io.cs.ChemShiftReader.RESIDUE	csb.bio.io.cs.ChemShiftReader-class.html#RESIDUE
csb.bio.io.cs.ChemShiftReader.SHIFT	csb.bio.io.cs.ChemShiftReader-class.html#SHIFT
csb.bio.io.cs.ChemShiftReader.RANK	csb.bio.io.cs.ChemShiftReader-class.html#RANK
csb.bio.io.cs.ChemShiftReader.read_file	csb.bio.io.cs.ChemShiftReader-class.html#read_file
csb.bio.io.cs.ChemShiftReader.__init__	csb.bio.io.cs.ChemShiftReader-class.html#__init__
csb.bio.io.cs.ChemShiftReader.guess	csb.bio.io.cs.ChemShiftReader-class.html#guess
csb.bio.io.cs.ChemShiftReader.FRAME	csb.bio.io.cs.ChemShiftReader-class.html#FRAME
csb.bio.io.cs.ChemShiftReader.read_shifts	csb.bio.io.cs.ChemShiftReader-class.html#read_shifts
csb.bio.io.cs.ChemShiftReader._scroll	csb.bio.io.cs.ChemShiftReader-class.html#_scroll
csb.bio.io.cs.ChemShiftReader.ELEMENT	csb.bio.io.cs.ChemShiftReader-class.html#ELEMENT
csb.bio.io.cs.ChemShiftReader.ATOM	csb.bio.io.cs.ChemShiftReader-class.html#ATOM
csb.bio.io.cs.ChemShiftReader._create_shift	csb.bio.io.cs.ChemShiftReader-class.html#_create_shift
csb.bio.io.cs.ChemShiftReader.create	csb.bio.io.cs.ChemShiftReader-class.html#create
csb.bio.io.dssp.DSSPParseError	csb.bio.io.dssp.DSSPParseError-class.html
csb.bio.io.dssp.DSSPParser	csb.bio.io.dssp.DSSPParser-class.html
csb.bio.io.dssp.DSSPParser.parse	csb.bio.io.dssp.DSSPParser-class.html#parse
csb.bio.io.dssp.ResidueAssignmentInfo	csb.bio.io.dssp.ResidueAssignmentInfo-class.html
csb.bio.io.dssp.ResidueAssignmentInfo.__init__	csb.bio.io.dssp.ResidueAssignmentInfo-class.html#__init__
csb.bio.io.dssp.StrideParser	csb.bio.io.dssp.StrideParser-class.html
csb.bio.io.dssp.StrideParser.parse	csb.bio.io.dssp.StrideParser-class.html#parse
csb.bio.io.fasta.A3MOutputBuilder	csb.bio.io.fasta.A3MOutputBuilder-class.html
csb.bio.io.fasta.OutputBuilder.__metaclass__	abc.ABCMeta-class.html
csb.bio.io.fasta.A3MOutputBuilder.FORMAT	csb.bio.io.fasta.A3MOutputBuilder-class.html#FORMAT
csb.bio.io.fasta.OutputBuilder._abc_negative_cache	csb.bio.io.fasta.OutputBuilder-class.html#_abc_negative_cache
csb.bio.io.fasta.OutputBuilder.writeline	csb.bio.io.fasta.OutputBuilder-class.html#writeline
csb.bio.io.fasta.OutputBuilder.__init__	csb.bio.io.fasta.OutputBuilder-class.html#__init__
csb.bio.io.fasta.A3MOutputBuilder._abc_cache	csb.bio.io.fasta.A3MOutputBuilder-class.html#_abc_cache
csb.bio.io.fasta.A3MOutputBuilder._add_a3m	csb.bio.io.fasta.A3MOutputBuilder-class.html#_add_a3m
csb.bio.io.fasta.OutputBuilder.headers	csb.bio.io.fasta.OutputBuilder-class.html#headers
csb.bio.io.fasta.OutputBuilder.create	csb.bio.io.fasta.OutputBuilder-class.html#create
csb.bio.io.fasta.A3MOutputBuilder.__abstractmethods__	csb.bio.io.fasta.A3MOutputBuilder-class.html#__abstractmethods__
csb.bio.io.fasta.A3MOutputBuilder.add_sequence	csb.bio.io.fasta.A3MOutputBuilder-class.html#add_sequence
csb.bio.io.fasta.OutputBuilder.write	csb.bio.io.fasta.OutputBuilder-class.html#write
csb.bio.io.fasta.OutputBuilder._abc_negative_cache_version	csb.bio.io.fasta.OutputBuilder-class.html#_abc_negative_cache_version
csb.bio.io.fasta.OutputBuilder.add_comment	csb.bio.io.fasta.OutputBuilder-class.html#add_comment
csb.bio.io.fasta.A3MOutputBuilder._add_proper	csb.bio.io.fasta.A3MOutputBuilder-class.html#_add_proper
csb.bio.io.fasta.OutputBuilder.register	csb.bio.io.fasta.OutputBuilder-class.html#register
csb.bio.io.fasta.A3MOutputBuilder.add_alignment	csb.bio.io.fasta.A3MOutputBuilder-class.html#add_alignment
csb.bio.io.fasta.OutputBuilder.add_many	csb.bio.io.fasta.OutputBuilder-class.html#add_many
csb.bio.io.fasta.OutputBuilder.add_separator	csb.bio.io.fasta.OutputBuilder-class.html#add_separator
csb.bio.io.fasta.OutputBuilder.output	csb.bio.io.fasta.OutputBuilder-class.html#output
csb.bio.io.fasta.OutputBuilder._registry	csb.bio.io.fasta.OutputBuilder-class.html#_registry
csb.bio.io.fasta.OutputBuilder._abc_registry	csb.bio.io.fasta.OutputBuilder-class.html#_abc_registry
csb.bio.io.fasta.A3MSequenceIterator	csb.bio.io.fasta.A3MSequenceIterator-class.html
csb.bio.io.fasta.A3MSequenceIterator.__next__	csb.bio.io.fasta.A3MSequenceIterator-class.html#__next__
csb.bio.io.fasta.A3MSequenceIterator.next	csb.bio.io.fasta.A3MSequenceIterator-class.html#next
csb.bio.io.fasta.A3MSequenceIterator.__iter__	csb.bio.io.fasta.A3MSequenceIterator-class.html#__iter__
csb.bio.io.fasta.A3MSequenceIterator.__init__	csb.bio.io.fasta.A3MSequenceIterator-class.html#__init__
csb.bio.io.fasta.BaseSequenceParser	csb.bio.io.fasta.BaseSequenceParser-class.html
csb.bio.io.fasta.BaseSequenceParser.__metaclass__	abc.ABCMeta-class.html
csb.bio.io.fasta.BaseSequenceParser._abc_negative_cache	csb.bio.io.fasta.BaseSequenceParser-class.html#_abc_negative_cache
csb.bio.io.fasta.BaseSequenceParser.__init__	csb.bio.io.fasta.BaseSequenceParser-class.html#__init__
csb.bio.io.fasta.BaseSequenceParser._abc_cache	csb.bio.io.fasta.BaseSequenceParser-class.html#_abc_cache
csb.bio.io.fasta.BaseSequenceParser.__abstractmethods__	csb.bio.io.fasta.BaseSequenceParser-class.html#__abstractmethods__
csb.bio.io.fasta.BaseSequenceParser.product_factory	csb.bio.io.fasta.BaseSequenceParser-class.html#product_factory
csb.bio.io.fasta.BaseSequenceParser.parse_file	csb.bio.io.fasta.BaseSequenceParser-class.html#parse_file
csb.bio.io.fasta.BaseSequenceParser.read	csb.bio.io.fasta.BaseSequenceParser-class.html#read
csb.bio.io.fasta.BaseSequenceParser.product_type	csb.bio.io.fasta.BaseSequenceParser-class.html#product_type
csb.bio.io.fasta.BaseSequenceParser.read_sequence	csb.bio.io.fasta.BaseSequenceParser-class.html#read_sequence
csb.bio.io.fasta.BaseSequenceParser.parse_string	csb.bio.io.fasta.BaseSequenceParser-class.html#parse_string
csb.bio.io.fasta.BaseSequenceParser._abc_negative_cache_version	csb.bio.io.fasta.BaseSequenceParser-class.html#_abc_negative_cache_version
csb.bio.io.fasta.BaseSequenceParser._abc_registry	csb.bio.io.fasta.BaseSequenceParser-class.html#_abc_registry
csb.bio.io.fasta.FASTAOutputBuilder	csb.bio.io.fasta.FASTAOutputBuilder-class.html
csb.bio.io.fasta.OutputBuilder.__metaclass__	abc.ABCMeta-class.html
csb.bio.io.fasta.FASTAOutputBuilder.FORMAT	csb.bio.io.fasta.FASTAOutputBuilder-class.html#FORMAT
csb.bio.io.fasta.OutputBuilder._abc_negative_cache	csb.bio.io.fasta.OutputBuilder-class.html#_abc_negative_cache
csb.bio.io.fasta.OutputBuilder.writeline	csb.bio.io.fasta.OutputBuilder-class.html#writeline
csb.bio.io.fasta.OutputBuilder.__init__	csb.bio.io.fasta.OutputBuilder-class.html#__init__
csb.bio.io.fasta.FASTAOutputBuilder._abc_cache	csb.bio.io.fasta.FASTAOutputBuilder-class.html#_abc_cache
csb.bio.io.fasta.OutputBuilder.headers	csb.bio.io.fasta.OutputBuilder-class.html#headers
csb.bio.io.fasta.OutputBuilder.create	csb.bio.io.fasta.OutputBuilder-class.html#create
csb.bio.io.fasta.FASTAOutputBuilder.__abstractmethods__	csb.bio.io.fasta.FASTAOutputBuilder-class.html#__abstractmethods__
csb.bio.io.fasta.FASTAOutputBuilder.add_sequence	csb.bio.io.fasta.FASTAOutputBuilder-class.html#add_sequence
csb.bio.io.fasta.OutputBuilder.write	csb.bio.io.fasta.OutputBuilder-class.html#write
csb.bio.io.fasta.OutputBuilder.add_separator	csb.bio.io.fasta.OutputBuilder-class.html#add_separator
csb.bio.io.fasta.OutputBuilder.add_comment	csb.bio.io.fasta.OutputBuilder-class.html#add_comment
csb.bio.io.fasta.OutputBuilder.register	csb.bio.io.fasta.OutputBuilder-class.html#register
csb.bio.io.fasta.FASTAOutputBuilder.add_alignment	csb.bio.io.fasta.FASTAOutputBuilder-class.html#add_alignment
csb.bio.io.fasta.OutputBuilder.add_many	csb.bio.io.fasta.OutputBuilder-class.html#add_many
csb.bio.io.fasta.OutputBuilder._abc_negative_cache_version	csb.bio.io.fasta.OutputBuilder-class.html#_abc_negative_cache_version
csb.bio.io.fasta.OutputBuilder.output	csb.bio.io.fasta.OutputBuilder-class.html#output
csb.bio.io.fasta.OutputBuilder._registry	csb.bio.io.fasta.OutputBuilder-class.html#_registry
csb.bio.io.fasta.OutputBuilder._abc_registry	csb.bio.io.fasta.OutputBuilder-class.html#_abc_registry
csb.bio.io.fasta.OutputBuilder	csb.bio.io.fasta.OutputBuilder-class.html
csb.bio.io.fasta.OutputBuilder.__metaclass__	abc.ABCMeta-class.html
csb.bio.io.fasta.OutputBuilder._abc_negative_cache	csb.bio.io.fasta.OutputBuilder-class.html#_abc_negative_cache
csb.bio.io.fasta.OutputBuilder.writeline	csb.bio.io.fasta.OutputBuilder-class.html#writeline
csb.bio.io.fasta.OutputBuilder.__init__	csb.bio.io.fasta.OutputBuilder-class.html#__init__
csb.bio.io.fasta.OutputBuilder._abc_cache	csb.bio.io.fasta.OutputBuilder-class.html#_abc_cache
csb.bio.io.fasta.OutputBuilder.headers	csb.bio.io.fasta.OutputBuilder-class.html#headers
csb.bio.io.fasta.OutputBuilder.create	csb.bio.io.fasta.OutputBuilder-class.html#create
csb.bio.io.fasta.OutputBuilder.__abstractmethods__	csb.bio.io.fasta.OutputBuilder-class.html#__abstractmethods__
csb.bio.io.fasta.OutputBuilder.add_sequence	csb.bio.io.fasta.OutputBuilder-class.html#add_sequence
csb.bio.io.fasta.OutputBuilder.write	csb.bio.io.fasta.OutputBuilder-class.html#write
csb.bio.io.fasta.OutputBuilder.add_separator	csb.bio.io.fasta.OutputBuilder-class.html#add_separator
csb.bio.io.fasta.OutputBuilder.add_comment	csb.bio.io.fasta.OutputBuilder-class.html#add_comment
csb.bio.io.fasta.OutputBuilder.register	csb.bio.io.fasta.OutputBuilder-class.html#register
csb.bio.io.fasta.OutputBuilder.add_alignment	csb.bio.io.fasta.OutputBuilder-class.html#add_alignment
csb.bio.io.fasta.OutputBuilder.add_many	csb.bio.io.fasta.OutputBuilder-class.html#add_many
csb.bio.io.fasta.OutputBuilder._abc_negative_cache_version	csb.bio.io.fasta.OutputBuilder-class.html#_abc_negative_cache_version
csb.bio.io.fasta.OutputBuilder.output	csb.bio.io.fasta.OutputBuilder-class.html#output
csb.bio.io.fasta.OutputBuilder._registry	csb.bio.io.fasta.OutputBuilder-class.html#_registry
csb.bio.io.fasta.OutputBuilder._abc_registry	csb.bio.io.fasta.OutputBuilder-class.html#_abc_registry
csb.bio.io.fasta.PDBSequenceParser	csb.bio.io.fasta.PDBSequenceParser-class.html
csb.bio.io.fasta.BaseSequenceParser.__metaclass__	abc.ABCMeta-class.html
csb.bio.io.fasta.BaseSequenceParser._abc_negative_cache	csb.bio.io.fasta.BaseSequenceParser-class.html#_abc_negative_cache
csb.bio.io.fasta.BaseSequenceParser.__init__	csb.bio.io.fasta.BaseSequenceParser-class.html#__init__
csb.bio.io.fasta.BaseSequenceParser._abc_cache	csb.bio.io.fasta.BaseSequenceParser-class.html#_abc_cache
csb.bio.io.fasta.SequenceParser.__abstractmethods__	csb.bio.io.fasta.SequenceParser-class.html#__abstractmethods__
csb.bio.io.fasta.BaseSequenceParser.product_factory	csb.bio.io.fasta.BaseSequenceParser-class.html#product_factory
csb.bio.io.fasta.BaseSequenceParser.parse_file	csb.bio.io.fasta.BaseSequenceParser-class.html#parse_file
csb.bio.io.fasta.BaseSequenceParser.read	csb.bio.io.fasta.BaseSequenceParser-class.html#read
csb.bio.io.fasta.BaseSequenceParser.product_type	csb.bio.io.fasta.BaseSequenceParser-class.html#product_type
csb.bio.io.fasta.PDBSequenceParser.read_sequence	csb.bio.io.fasta.PDBSequenceParser-class.html#read_sequence
csb.bio.io.fasta.BaseSequenceParser.parse_string	csb.bio.io.fasta.BaseSequenceParser-class.html#parse_string
csb.bio.io.fasta.BaseSequenceParser._abc_negative_cache_version	csb.bio.io.fasta.BaseSequenceParser-class.html#_abc_negative_cache_version
csb.bio.io.fasta.BaseSequenceParser._abc_registry	csb.bio.io.fasta.BaseSequenceParser-class.html#_abc_registry
csb.bio.io.fasta.PIROutputBuilder	csb.bio.io.fasta.PIROutputBuilder-class.html
csb.bio.io.fasta.OutputBuilder.__metaclass__	abc.ABCMeta-class.html
csb.bio.io.fasta.PIROutputBuilder.FORMAT	csb.bio.io.fasta.PIROutputBuilder-class.html#FORMAT
csb.bio.io.fasta.OutputBuilder._abc_negative_cache	csb.bio.io.fasta.OutputBuilder-class.html#_abc_negative_cache
csb.bio.io.fasta.PIROutputBuilder._add	csb.bio.io.fasta.PIROutputBuilder-class.html#_add
csb.bio.io.fasta.OutputBuilder.writeline	csb.bio.io.fasta.OutputBuilder-class.html#writeline
csb.bio.io.fasta.OutputBuilder.__init__	csb.bio.io.fasta.OutputBuilder-class.html#__init__
csb.bio.io.fasta.PIROutputBuilder._abc_cache	csb.bio.io.fasta.PIROutputBuilder-class.html#_abc_cache
csb.bio.io.fasta.PIROutputBuilder.add_target	csb.bio.io.fasta.PIROutputBuilder-class.html#add_target
csb.bio.io.fasta.OutputBuilder.add_many	csb.bio.io.fasta.OutputBuilder-class.html#add_many
csb.bio.io.fasta.OutputBuilder.create	csb.bio.io.fasta.OutputBuilder-class.html#create
csb.bio.io.fasta.PIROutputBuilder.__abstractmethods__	csb.bio.io.fasta.PIROutputBuilder-class.html#__abstractmethods__
csb.bio.io.fasta.PIROutputBuilder.add_sequence	csb.bio.io.fasta.PIROutputBuilder-class.html#add_sequence
csb.bio.io.fasta.OutputBuilder.write	csb.bio.io.fasta.OutputBuilder-class.html#write
csb.bio.io.fasta.OutputBuilder._abc_negative_cache_version	csb.bio.io.fasta.OutputBuilder-class.html#_abc_negative_cache_version
csb.bio.io.fasta.OutputBuilder.add_comment	csb.bio.io.fasta.OutputBuilder-class.html#add_comment
csb.bio.io.fasta.PIROutputBuilder.add_template	csb.bio.io.fasta.PIROutputBuilder-class.html#add_template
csb.bio.io.fasta.OutputBuilder.register	csb.bio.io.fasta.OutputBuilder-class.html#register
csb.bio.io.fasta.PIROutputBuilder.add_alignment	csb.bio.io.fasta.PIROutputBuilder-class.html#add_alignment
csb.bio.io.fasta.OutputBuilder.headers	csb.bio.io.fasta.OutputBuilder-class.html#headers
csb.bio.io.fasta.OutputBuilder.add_separator	csb.bio.io.fasta.OutputBuilder-class.html#add_separator
csb.bio.io.fasta.OutputBuilder.output	csb.bio.io.fasta.OutputBuilder-class.html#output
csb.bio.io.fasta.OutputBuilder._registry	csb.bio.io.fasta.OutputBuilder-class.html#_registry
csb.bio.io.fasta.OutputBuilder._abc_registry	csb.bio.io.fasta.OutputBuilder-class.html#_abc_registry
csb.bio.io.fasta.SequenceAlignmentReader	csb.bio.io.fasta.SequenceAlignmentReader-class.html
csb.bio.io.fasta.SequenceAlignmentReader.product_type	csb.bio.io.fasta.SequenceAlignmentReader-class.html#product_type
csb.bio.io.fasta.SequenceAlignmentReader.read_a3m	csb.bio.io.fasta.SequenceAlignmentReader-class.html#read_a3m
csb.bio.io.fasta.SequenceAlignmentReader.read_fasta	csb.bio.io.fasta.SequenceAlignmentReader-class.html#read_fasta
csb.bio.io.fasta.SequenceAlignmentReader.strict	csb.bio.io.fasta.SequenceAlignmentReader-class.html#strict
csb.bio.io.fasta.SequenceAlignmentReader.__init__	csb.bio.io.fasta.SequenceAlignmentReader-class.html#__init__
csb.bio.io.fasta.SequenceFormatError	csb.bio.io.fasta.SequenceFormatError-class.html
csb.bio.io.fasta.SequenceParser	csb.bio.io.fasta.SequenceParser-class.html
csb.bio.io.fasta.BaseSequenceParser.__metaclass__	abc.ABCMeta-class.html
csb.bio.io.fasta.BaseSequenceParser._abc_negative_cache	csb.bio.io.fasta.BaseSequenceParser-class.html#_abc_negative_cache
csb.bio.io.fasta.BaseSequenceParser.__init__	csb.bio.io.fasta.BaseSequenceParser-class.html#__init__
csb.bio.io.fasta.BaseSequenceParser._abc_cache	csb.bio.io.fasta.BaseSequenceParser-class.html#_abc_cache
csb.bio.io.fasta.SequenceParser.__abstractmethods__	csb.bio.io.fasta.SequenceParser-class.html#__abstractmethods__
csb.bio.io.fasta.BaseSequenceParser.product_factory	csb.bio.io.fasta.BaseSequenceParser-class.html#product_factory
csb.bio.io.fasta.BaseSequenceParser.parse_file	csb.bio.io.fasta.BaseSequenceParser-class.html#parse_file
csb.bio.io.fasta.BaseSequenceParser.read	csb.bio.io.fasta.BaseSequenceParser-class.html#read
csb.bio.io.fasta.BaseSequenceParser.product_type	csb.bio.io.fasta.BaseSequenceParser-class.html#product_type
csb.bio.io.fasta.SequenceParser.read_sequence	csb.bio.io.fasta.SequenceParser-class.html#read_sequence
csb.bio.io.fasta.BaseSequenceParser.parse_string	csb.bio.io.fasta.BaseSequenceParser-class.html#parse_string
csb.bio.io.fasta.BaseSequenceParser._abc_negative_cache_version	csb.bio.io.fasta.BaseSequenceParser-class.html#_abc_negative_cache_version
csb.bio.io.fasta.BaseSequenceParser._abc_registry	csb.bio.io.fasta.BaseSequenceParser-class.html#_abc_registry
csb.bio.io.fasta.StructureAlignmentFactory	csb.bio.io.fasta.StructureAlignmentFactory-class.html
csb.bio.io.fasta.StructureAlignmentFactory.product_type	csb.bio.io.fasta.StructureAlignmentFactory-class.html#product_type
csb.bio.io.fasta.StructureAlignmentFactory.strict	csb.bio.io.fasta.StructureAlignmentFactory-class.html#strict
csb.bio.io.fasta.StructureAlignmentFactory.id_factory	csb.bio.io.fasta.StructureAlignmentFactory-class.html#id_factory
csb.bio.io.fasta.StructureAlignmentFactory.make_alignment	csb.bio.io.fasta.StructureAlignmentFactory-class.html#make_alignment
csb.bio.io.fasta.StructureAlignmentFactory.provider	csb.bio.io.fasta.StructureAlignmentFactory-class.html#provider
csb.bio.io.fasta.StructureAlignmentFactory.make_entry	csb.bio.io.fasta.StructureAlignmentFactory-class.html#make_entry
csb.bio.io.fasta.StructureAlignmentFactory.__init__	csb.bio.io.fasta.StructureAlignmentFactory-class.html#__init__
csb.bio.io.hhpred.HHMFileBuilder	csb.bio.io.hhpred.HHMFileBuilder-class.html
csb.bio.io.hhpred.HHMFileBuilder.write	csb.bio.io.hhpred.HHMFileBuilder-class.html#write
csb.bio.io.hhpred.HHMFileBuilder.add_hmm	csb.bio.io.hhpred.HHMFileBuilder-class.html#add_hmm
csb.bio.io.hhpred.HHMFileBuilder.writeline	csb.bio.io.hhpred.HHMFileBuilder-class.html#writeline
csb.bio.io.hhpred.HHMFileBuilder.output	csb.bio.io.hhpred.HHMFileBuilder-class.html#output
csb.bio.io.hhpred.HHMFileBuilder.__init__	csb.bio.io.hhpred.HHMFileBuilder-class.html#__init__
csb.bio.io.hhpred.HHOutputFormatError	csb.bio.io.hhpred.HHOutputFormatError-class.html
csb.bio.io.hhpred.HHOutputParser	csb.bio.io.hhpred.HHOutputParser-class.html
csb.bio.io.hhpred.HHOutputParser.parse_string	csb.bio.io.hhpred.HHOutputParser-class.html#parse_string
csb.bio.io.hhpred.HHOutputParser.__repr__	csb.bio.io.hhpred.HHOutputParser-class.html#__repr__
csb.bio.io.hhpred.HHOutputParser.parse_file	csb.bio.io.hhpred.HHOutputParser-class.html#parse_file
csb.bio.io.hhpred.HHOutputParser._parse	csb.bio.io.hhpred.HHOutputParser-class.html#_parse
csb.bio.io.hhpred.HHOutputParser.alignments	csb.bio.io.hhpred.HHOutputParser-class.html#alignments
csb.bio.io.hhpred.HHOutputParser.__init__	csb.bio.io.hhpred.HHOutputParser-class.html#__init__
csb.bio.io.hhpred.HHProfileFormatError	csb.bio.io.hhpred.HHProfileFormatError-class.html
csb.bio.io.hhpred.HHProfileParser	csb.bio.io.hhpred.HHProfileParser-class.html
csb.bio.io.hhpred.HHProfileParser._parse_structure	csb.bio.io.hhpred.HHProfileParser-class.html#_parse_structure
csb.bio.io.hhpred.HHProfileParser._parse_profile	csb.bio.io.hhpred.HHProfileParser-class.html#_parse_profile
csb.bio.io.hhpred.HHProfileParser._parse_properties	csb.bio.io.hhpred.HHProfileParser-class.html#_parse_properties
csb.bio.io.hhpred.HHProfileParser.parse	csb.bio.io.hhpred.HHProfileParser-class.html#parse
csb.bio.io.hhpred.HHProfileParser.__init__	csb.bio.io.hhpred.HHProfileParser-class.html#__init__
csb.bio.io.hhpred.HHProfileParser._parse_sequences	csb.bio.io.hhpred.HHProfileParser-class.html#_parse_sequences
csb.bio.io.hhpred.HHProfileParser.format_structure	csb.bio.io.hhpred.HHProfileParser-class.html#format_structure
csb.bio.io.hhpred.HHProfileParser._add_transition	csb.bio.io.hhpred.HHProfileParser-class.html#_add_transition
csb.bio.io.hhpred.HHProfileParser._chop	csb.bio.io.hhpred.HHProfileParser-class.html#_chop
csb.bio.io.hhpred.StructureFormatError	csb.bio.io.hhpred.StructureFormatError-class.html
csb.bio.io.mrc.ByteOrder	csb.bio.io.mrc.ByteOrder-class.html
csb.bio.io.mrc.ByteOrder.LITTLE	csb.bio.io.mrc.ByteOrder-class.html#LITTLE
csb.bio.io.mrc.ByteOrder.BIG	csb.bio.io.mrc.ByteOrder-class.html#BIG
csb.bio.io.mrc.ByteOrder.NATIVE	csb.bio.io.mrc.ByteOrder-class.html#NATIVE
csb.bio.io.mrc.DensityInfo	csb.bio.io.mrc.DensityInfo-class.html
csb.bio.io.mrc.DensityInfo.__init__	csb.bio.io.mrc.DensityInfo-class.html#__init__
csb.bio.io.mrc.DensityMapFormatError	csb.bio.io.mrc.DensityMapFormatError-class.html
csb.bio.io.mrc.DensityMapReader	csb.bio.io.mrc.DensityMapReader-class.html
csb.bio.io.mrc.DensityMapReader.HEADER_SIZE	csb.bio.io.mrc.DensityMapReader-class.html#HEADER_SIZE
csb.bio.io.mrc.DensityMapReader._spacing	csb.bio.io.mrc.DensityMapReader-class.html#_spacing
csb.bio.io.mrc.DensityMapReader._origin	csb.bio.io.mrc.DensityMapReader-class.html#_origin
csb.bio.io.mrc.DensityMapReader._rawheader	csb.bio.io.mrc.DensityMapReader-class.html#_rawheader
csb.bio.io.mrc.DensityMapReader.inspect_header	csb.bio.io.mrc.DensityMapReader-class.html#inspect_header
csb.bio.io.mrc.DensityMapReader.read_header	csb.bio.io.mrc.DensityMapReader-class.html#read_header
csb.bio.io.mrc.DensityMapReader.filename	csb.bio.io.mrc.DensityMapReader-class.html#filename
csb.bio.io.mrc.DensityMapReader.__init__	csb.bio.io.mrc.DensityMapReader-class.html#__init__
csb.bio.io.mrc.DensityMapReader.read	csb.bio.io.mrc.DensityMapReader-class.html#read
csb.bio.io.mrc.DensityMapReader._shape	csb.bio.io.mrc.DensityMapReader-class.html#_shape
csb.bio.io.mrc.DensityMapReader._inspect	csb.bio.io.mrc.DensityMapReader-class.html#_inspect
csb.bio.io.mrc.DensityMapWriter	csb.bio.io.mrc.DensityMapWriter-class.html
csb.bio.io.mrc.DensityMapWriter.write	csb.bio.io.mrc.DensityMapWriter-class.html#write
csb.bio.io.mrc.DensityMapWriter.write_file	csb.bio.io.mrc.DensityMapWriter-class.html#write_file
csb.bio.io.mrc.DensityMapWriter.reconstruct_header	csb.bio.io.mrc.DensityMapWriter-class.html#reconstruct_header
csb.bio.io.mrc.HeaderInfo	csb.bio.io.mrc.HeaderInfo-class.html
csb.bio.io.mrc.HeaderInfo.nc	csb.bio.io.mrc.HeaderInfo-class.html#nc
csb.bio.io.mrc.HeaderInfo.amean	csb.bio.io.mrc.HeaderInfo-class.html#amean
csb.bio.io.mrc.HeaderInfo.__init__	csb.bio.io.mrc.HeaderInfo-class.html#__init__
csb.bio.io.mrc.HeaderInfo.mapc	csb.bio.io.mrc.HeaderInfo-class.html#mapc
csb.bio.io.mrc.HeaderInfo.ny	csb.bio.io.mrc.HeaderInfo-class.html#ny
csb.bio.io.mrc.HeaderInfo.nrstart	csb.bio.io.mrc.HeaderInfo-class.html#nrstart
csb.bio.io.mrc.HeaderInfo.nsymbt	csb.bio.io.mrc.HeaderInfo-class.html#nsymbt
csb.bio.io.mrc.HeaderInfo.mapr	csb.bio.io.mrc.HeaderInfo-class.html#mapr
csb.bio.io.mrc.HeaderInfo.maps	csb.bio.io.mrc.HeaderInfo-class.html#maps
csb.bio.io.mrc.HeaderInfo.nz	csb.bio.io.mrc.HeaderInfo-class.html#nz
csb.bio.io.mrc.HeaderInfo.nr	csb.bio.io.mrc.HeaderInfo-class.html#nr
csb.bio.io.mrc.HeaderInfo.ns	csb.bio.io.mrc.HeaderInfo-class.html#ns
csb.bio.io.mrc.HeaderInfo.__getitem__	csb.bio.io.mrc.HeaderInfo-class.html#__getitem__
csb.bio.io.mrc.HeaderInfo.__iter__	csb.bio.io.mrc.HeaderInfo-class.html#__iter__
csb.bio.io.mrc.HeaderInfo.amin	csb.bio.io.mrc.HeaderInfo-class.html#amin
csb.bio.io.mrc.HeaderInfo.nsstart	csb.bio.io.mrc.HeaderInfo-class.html#nsstart
csb.bio.io.mrc.HeaderInfo.lskflg	csb.bio.io.mrc.HeaderInfo-class.html#lskflg
csb.bio.io.mrc.HeaderInfo.alpha	csb.bio.io.mrc.HeaderInfo-class.html#alpha
csb.bio.io.mrc.HeaderInfo.ispg	csb.bio.io.mrc.HeaderInfo-class.html#ispg
csb.bio.io.mrc.HeaderInfo.amax	csb.bio.io.mrc.HeaderInfo-class.html#amax
csb.bio.io.mrc.HeaderInfo.nx	csb.bio.io.mrc.HeaderInfo-class.html#nx
csb.bio.io.mrc.HeaderInfo.ncstart	csb.bio.io.mrc.HeaderInfo-class.html#ncstart
csb.bio.io.mrc.HeaderInfo.beta	csb.bio.io.mrc.HeaderInfo-class.html#beta
csb.bio.io.mrc.HeaderInfo.mode	csb.bio.io.mrc.HeaderInfo-class.html#mode
csb.bio.io.mrc.HeaderInfo.y	csb.bio.io.mrc.HeaderInfo-class.html#y
csb.bio.io.mrc.HeaderInfo.x	csb.bio.io.mrc.HeaderInfo-class.html#x
csb.bio.io.mrc.HeaderInfo.z	csb.bio.io.mrc.HeaderInfo-class.html#z
csb.bio.io.mrc.HeaderInfo.gamma	csb.bio.io.mrc.HeaderInfo-class.html#gamma
csb.bio.io.noe.BasePeakListReader	csb.bio.io.noe.BasePeakListReader-class.html
csb.bio.io.noe.BasePeakListReader.__metaclass__	abc.ABCMeta-class.html
csb.bio.io.noe.BasePeakListReader._abc_negative_cache	csb.bio.io.noe.BasePeakListReader-class.html#_abc_negative_cache
csb.bio.io.noe.BasePeakListReader.read_file	csb.bio.io.noe.BasePeakListReader-class.html#read_file
csb.bio.io.noe.BasePeakListReader._abc_cache	csb.bio.io.noe.BasePeakListReader-class.html#_abc_cache
csb.bio.io.noe.BasePeakListReader.__abstractmethods__	csb.bio.io.noe.BasePeakListReader-class.html#__abstractmethods__
csb.bio.io.noe.BasePeakListReader.read	csb.bio.io.noe.BasePeakListReader-class.html#read
csb.bio.io.noe.BasePeakListReader.read_all	csb.bio.io.noe.BasePeakListReader-class.html#read_all
csb.bio.io.noe.BasePeakListReader._abc_negative_cache_version	csb.bio.io.noe.BasePeakListReader-class.html#_abc_negative_cache_version
csb.bio.io.noe.BasePeakListReader._abc_registry	csb.bio.io.noe.BasePeakListReader-class.html#_abc_registry
csb.bio.io.noe.PeakListFormatError	csb.bio.io.noe.PeakListFormatError-class.html
csb.bio.io.noe.SparkyPeakListReader	csb.bio.io.noe.SparkyPeakListReader-class.html
csb.bio.io.noe.BasePeakListReader.__metaclass__	abc.ABCMeta-class.html
csb.bio.io.noe.BasePeakListReader._abc_negative_cache	csb.bio.io.noe.BasePeakListReader-class.html#_abc_negative_cache
csb.bio.io.noe.BasePeakListReader.read_file	csb.bio.io.noe.BasePeakListReader-class.html#read_file
csb.bio.io.noe.SparkyPeakListReader.__init__	csb.bio.io.noe.SparkyPeakListReader-class.html#__init__
csb.bio.io.noe.BasePeakListReader._abc_cache	csb.bio.io.noe.BasePeakListReader-class.html#_abc_cache
csb.bio.io.noe.SparkyPeakListReader.__abstractmethods__	csb.bio.io.noe.SparkyPeakListReader-class.html#__abstractmethods__
csb.bio.io.noe.SparkyPeakListReader.read	csb.bio.io.noe.SparkyPeakListReader-class.html#read
csb.bio.io.noe.BasePeakListReader.read_all	csb.bio.io.noe.BasePeakListReader-class.html#read_all
csb.bio.io.noe.BasePeakListReader._abc_negative_cache_version	csb.bio.io.noe.BasePeakListReader-class.html#_abc_negative_cache_version
csb.bio.io.noe.BasePeakListReader._abc_registry	csb.bio.io.noe.BasePeakListReader-class.html#_abc_registry
csb.bio.io.noe.XeasyFileBuilder	csb.bio.io.noe.XeasyFileBuilder-class.html
csb.bio.io.noe.XeasyFileBuilder.add_peaks	csb.bio.io.noe.XeasyFileBuilder-class.html#add_peaks
csb.bio.io.noe.XeasyFileBuilder.add_header	csb.bio.io.noe.XeasyFileBuilder-class.html#add_header
csb.bio.io.noe.XeasyFileBuilder.add_spectrum	csb.bio.io.noe.XeasyFileBuilder-class.html#add_spectrum
csb.bio.io.noe.XeasyFileBuilder.__init__	csb.bio.io.noe.XeasyFileBuilder-class.html#__init__
csb.bio.io.noe.XeasyPeakListReader	csb.bio.io.noe.XeasyPeakListReader-class.html
csb.bio.io.noe.BasePeakListReader.__metaclass__	abc.ABCMeta-class.html
csb.bio.io.noe.BasePeakListReader._abc_negative_cache	csb.bio.io.noe.BasePeakListReader-class.html#_abc_negative_cache
csb.bio.io.noe.BasePeakListReader.read_file	csb.bio.io.noe.BasePeakListReader-class.html#read_file
csb.bio.io.noe.XeasyPeakListReader.__init__	csb.bio.io.noe.XeasyPeakListReader-class.html#__init__
csb.bio.io.noe.BasePeakListReader._abc_cache	csb.bio.io.noe.BasePeakListReader-class.html#_abc_cache
csb.bio.io.noe.XeasyPeakListReader.__abstractmethods__	csb.bio.io.noe.XeasyPeakListReader-class.html#__abstractmethods__
csb.bio.io.noe.XeasyPeakListReader.read	csb.bio.io.noe.XeasyPeakListReader-class.html#read
csb.bio.io.noe.XeasyPeakListReader._read_header	csb.bio.io.noe.XeasyPeakListReader-class.html#_read_header
csb.bio.io.noe.BasePeakListReader.read_all	csb.bio.io.noe.BasePeakListReader-class.html#read_all
csb.bio.io.noe.BasePeakListReader._abc_negative_cache_version	csb.bio.io.noe.BasePeakListReader-class.html#_abc_negative_cache_version
csb.bio.io.noe.BasePeakListReader._abc_registry	csb.bio.io.noe.BasePeakListReader-class.html#_abc_registry
csb.bio.io.procheck.ProcheckParser	csb.bio.io.procheck.ProcheckParser-class.html
csb.bio.io.procheck.ProcheckParser.parse	csb.bio.io.procheck.ProcheckParser-class.html#parse
csb.bio.io.procheck.ProcheckParser.run	csb.bio.io.procheck.ProcheckParser-class.html#run
csb.bio.io.procheck.ProcheckParser.__init__	csb.bio.io.procheck.ProcheckParser-class.html#__init__
csb.bio.io.psipred.PSIPredParseError	csb.bio.io.psipred.PSIPredParseError-class.html
csb.bio.io.psipred.PSIPredParser	csb.bio.io.psipred.PSIPredParser-class.html
csb.bio.io.psipred.PSIPredParser.parse	csb.bio.io.psipred.PSIPredParser-class.html#parse
csb.bio.io.psipred.PSIPredParser.parse_scores	csb.bio.io.psipred.PSIPredParser-class.html#parse_scores
csb.bio.io.psipred.PSIPredResidueInfo	csb.bio.io.psipred.PSIPredResidueInfo-class.html
csb.bio.io.psipred.PSIPredResidueInfo.__init__	csb.bio.io.psipred.PSIPredResidueInfo-class.html#__init__
csb.bio.io.svg.SSCartoonBuilder	csb.bio.io.svg.SSCartoonBuilder-class.html
csb.bio.io.svg.SSCartoonBuilder._format	csb.bio.io.svg.SSCartoonBuilder-class.html#_format
csb.bio.io.svg.SSCartoonBuilder._coil	csb.bio.io.svg.SSCartoonBuilder-class.html#_coil
csb.bio.io.svg.SSCartoonBuilder._strand	csb.bio.io.svg.SSCartoonBuilder-class.html#_strand
csb.bio.io.svg.SSCartoonBuilder._helix	csb.bio.io.svg.SSCartoonBuilder-class.html#_helix
csb.bio.io.svg.SSCartoonBuilder.build	csb.bio.io.svg.SSCartoonBuilder-class.html#build
csb.bio.io.svg.SSCartoonBuilder._gap	csb.bio.io.svg.SSCartoonBuilder-class.html#_gap
csb.bio.io.svg.SSCartoonBuilder.__init__	csb.bio.io.svg.SSCartoonBuilder-class.html#__init__
csb.bio.io.vasco.ChemicalShiftContainer	csb.bio.io.vasco.ChemicalShiftContainer-class.html
csb.core.BaseDictionaryContainer._exception	csb.core.BaseDictionaryContainer-class.html#_exception
csb.core.DictionaryContainer._update	csb.core.DictionaryContainer-class.html#_update
csb.bio.io.vasco.ChemicalShiftContainer.__init__	csb.bio.io.vasco.ChemicalShiftContainer-class.html#__init__
csb.core.BaseDictionaryContainer.__contains__	csb.core.BaseDictionaryContainer-class.html#__contains__
csb.core.BaseDictionaryContainer._getinternal	csb.core.BaseDictionaryContainer-class.html#_getinternal
csb.core.DictionaryContainer._remove	csb.core.DictionaryContainer-class.html#_remove
csb.core.DictionaryContainer.append	csb.core.DictionaryContainer-class.html#append
csb.core.BaseDictionaryContainer._set_items	csb.core.BaseDictionaryContainer-class.html#_set_items
csb.core.BaseDictionaryContainer._update_items	csb.core.BaseDictionaryContainer-class.html#_update_items
csb.core.BaseDictionaryContainer.__len__	csb.core.BaseDictionaryContainer-class.html#__len__
csb.core.BaseDictionaryContainer.__getitem__	csb.core.BaseDictionaryContainer-class.html#__getitem__
csb.core.BaseDictionaryContainer.keys	csb.core.BaseDictionaryContainer-class.html#keys
csb.core.BaseDictionaryContainer.__iter__	csb.core.BaseDictionaryContainer-class.html#__iter__
csb.core.BaseDictionaryContainer.__bool__	csb.core.BaseDictionaryContainer-class.html#__bool__
csb.core.BaseDictionaryContainer._append_item	csb.core.BaseDictionaryContainer-class.html#_append_item
csb.core.BaseDictionaryContainer.__nonzero__	csb.core.BaseDictionaryContainer-class.html#__nonzero__
csb.core.BaseDictionaryContainer.length	csb.core.BaseDictionaryContainer-class.html#length
csb.core.BaseDictionaryContainer._remove_item	csb.core.BaseDictionaryContainer-class.html#_remove_item
csb.core.BaseDictionaryContainer.__repr__	csb.core.BaseDictionaryContainer-class.html#__repr__
csb.core.DictionaryContainer._set	csb.core.DictionaryContainer-class.html#_set
csb.bio.io.vasco.ShiftInfo	csb.bio.io.vasco.ShiftInfo-class.html
csb.bio.io.vasco.ShiftInfo.__str__	csb.bio.io.vasco.ShiftInfo-class.html#__str__
csb.bio.io.vasco.ShiftInfo.__repr__	csb.bio.io.vasco.ShiftInfo-class.html#__repr__
csb.bio.io.vasco.ShiftInfo.__init__	csb.bio.io.vasco.ShiftInfo-class.html#__init__
csb.bio.io.vasco.VascoStructureParser	csb.bio.io.vasco.VascoStructureParser-class.html
csb.bio.io.vasco.VascoStructureParser._parse_shifts	csb.bio.io.vasco.VascoStructureParser-class.html#_parse_shifts
csb.bio.io.vasco.VascoStructureParser.parse	csb.bio.io.vasco.VascoStructureParser-class.html#parse
csb.bio.io.vasco.VascoStructureParser._parse_header	csb.bio.io.vasco.VascoStructureParser-class.html#_parse_header
csb.bio.io.vasco.VascoStructureParser.__init__	csb.bio.io.vasco.VascoStructureParser-class.html#__init__
csb.bio.io.whatif.WhatCheckParser	csb.bio.io.whatif.WhatCheckParser-class.html
csb.bio.io.whatif.WhatCheckParser.run	csb.bio.io.whatif.WhatCheckParser-class.html#run
csb.bio.io.whatif.WhatCheckParser.parse_summary	csb.bio.io.whatif.WhatCheckParser-class.html#parse_summary
csb.bio.io.whatif.WhatCheckParser.parse	csb.bio.io.whatif.WhatCheckParser-class.html#parse
csb.bio.io.whatif.WhatCheckParser.__init__	csb.bio.io.whatif.WhatCheckParser-class.html#__init__
csb.bio.io.wwpdb.AbstractResidueMapper	csb.bio.io.wwpdb.AbstractResidueMapper-class.html
csb.bio.io.wwpdb.AbstractResidueMapper.__metaclass__	abc.ABCMeta-class.html
csb.bio.io.wwpdb.AbstractResidueMapper._abc_negative_cache	csb.bio.io.wwpdb.AbstractResidueMapper-class.html#_abc_negative_cache
csb.bio.io.wwpdb.AbstractResidueMapper._abc_cache	csb.bio.io.wwpdb.AbstractResidueMapper-class.html#_abc_cache
csb.bio.io.wwpdb.AbstractResidueMapper.__abstractmethods__	csb.bio.io.wwpdb.AbstractResidueMapper-class.html#__abstractmethods__
csb.bio.io.wwpdb.AbstractResidueMapper.map	csb.bio.io.wwpdb.AbstractResidueMapper-class.html#map
csb.bio.io.wwpdb.AbstractResidueMapper._build	csb.bio.io.wwpdb.AbstractResidueMapper-class.html#_build
csb.bio.io.wwpdb.AbstractResidueMapper.create_gap	csb.bio.io.wwpdb.AbstractResidueMapper-class.html#create_gap
csb.bio.io.wwpdb.AbstractResidueMapper._abc_negative_cache_version	csb.bio.io.wwpdb.AbstractResidueMapper-class.html#_abc_negative_cache_version
csb.bio.io.wwpdb.AbstractResidueMapper._abc_registry	csb.bio.io.wwpdb.AbstractResidueMapper-class.html#_abc_registry
csb.bio.io.wwpdb.AbstractStructureParser	csb.bio.io.wwpdb.AbstractStructureParser-class.html
csb.bio.io.wwpdb.AbstractStructureParser._parse_atoms	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_parse_atoms
csb.bio.io.wwpdb.AbstractStructureParser.__metaclass__	abc.ABCMeta-class.html
csb.bio.io.wwpdb.AbstractStructureParser._abc_negative_cache	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_abc_negative_cache
csb.bio.io.wwpdb.AbstractStructureParser.guess_chain_type	csb.bio.io.wwpdb.AbstractStructureParser-class.html#guess_chain_type
csb.bio.io.wwpdb.AbstractStructureParser._map_residues	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_map_residues
csb.bio.io.wwpdb.AbstractStructureParser.parse	csb.bio.io.wwpdb.AbstractStructureParser-class.html#parse
csb.bio.io.wwpdb.AbstractStructureParser._read_atom	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_atom
csb.bio.io.wwpdb.AbstractStructureParser._read_residue	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_residue
csb.bio.io.wwpdb.AbstractStructureParser._read_model	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_model
csb.bio.io.wwpdb.AbstractStructureParser._parse_atom_line	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_parse_atom_line
csb.bio.io.wwpdb.AbstractStructureParser.__init__	csb.bio.io.wwpdb.AbstractStructureParser-class.html#__init__
csb.bio.io.wwpdb.AbstractStructureParser._abc_cache	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_abc_cache
csb.bio.io.wwpdb.AbstractStructureParser._read_residue_raw	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_residue_raw
csb.bio.io.wwpdb.AbstractStructureParser._parse_model_line	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_parse_model_line
csb.bio.io.wwpdb.AbstractStructureParser.__abstractmethods__	csb.bio.io.wwpdb.AbstractStructureParser-class.html#__abstractmethods__
csb.bio.io.wwpdb.AbstractStructureParser.filename	csb.bio.io.wwpdb.AbstractStructureParser-class.html#filename
csb.bio.io.wwpdb.AbstractStructureParser.models	csb.bio.io.wwpdb.AbstractStructureParser-class.html#models
csb.bio.io.wwpdb.AbstractStructureParser._read_chain_id	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_chain_id
csb.bio.io.wwpdb.AbstractStructureParser._scroll_model	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_scroll_model
csb.bio.io.wwpdb.AbstractStructureParser._read_bfactor	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_bfactor
csb.bio.io.wwpdb.AbstractStructureParser.guess_sequence_type	csb.bio.io.wwpdb.AbstractStructureParser-class.html#guess_sequence_type
csb.bio.io.wwpdb.AbstractStructureParser.create_parser	csb.bio.io.wwpdb.AbstractStructureParser-class.html#create_parser
csb.bio.io.wwpdb.AbstractStructureParser.__del__	csb.bio.io.wwpdb.AbstractStructureParser-class.html#__del__
csb.bio.io.wwpdb.AbstractStructureParser.parse_residue	csb.bio.io.wwpdb.AbstractStructureParser-class.html#parse_residue
csb.bio.io.wwpdb.AbstractStructureParser.parse_residue_safe	csb.bio.io.wwpdb.AbstractStructureParser-class.html#parse_residue_safe
csb.bio.io.wwpdb.AbstractStructureParser._read_insertion_code	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_insertion_code
csb.bio.io.wwpdb.AbstractStructureParser._parse_remarks	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_parse_remarks
csb.bio.io.wwpdb.AbstractStructureParser._read_sequence_number	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_sequence_number
csb.bio.io.wwpdb.AbstractStructureParser._read_charge	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_charge
csb.bio.io.wwpdb.AbstractStructureParser.mapper	csb.bio.io.wwpdb.AbstractStructureParser-class.html#mapper
csb.bio.io.wwpdb.AbstractStructureParser.parse_models	csb.bio.io.wwpdb.AbstractStructureParser-class.html#parse_models
csb.bio.io.wwpdb.AbstractStructureParser._read_occupancy	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_occupancy
csb.bio.io.wwpdb.AbstractStructureParser._read_element	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_element
csb.bio.io.wwpdb.AbstractStructureParser._parse_ss	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_parse_ss
csb.bio.io.wwpdb.AbstractStructureParser._read_alternate	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_alternate
csb.bio.io.wwpdb.AbstractStructureParser._parse_header	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_parse_header
csb.bio.io.wwpdb.AbstractStructureParser._abc_negative_cache_version	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_abc_negative_cache_version
csb.bio.io.wwpdb.AbstractStructureParser.parse_structure	csb.bio.io.wwpdb.AbstractStructureParser-class.html#parse_structure
csb.bio.io.wwpdb.AbstractStructureParser.parse_biomolecule	csb.bio.io.wwpdb.AbstractStructureParser-class.html#parse_biomolecule
csb.bio.io.wwpdb.AbstractStructureParser._abc_registry	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_abc_registry
csb.bio.io.wwpdb.AsyncParseResult	csb.bio.io.wwpdb.AsyncParseResult-class.html
csb.bio.io.wwpdb.AsyncParseResult.__repr__	csb.bio.io.wwpdb.AsyncParseResult-class.html#__repr__
csb.bio.io.wwpdb.AsyncParseResult.__init__	csb.bio.io.wwpdb.AsyncParseResult-class.html#__init__
csb.bio.io.wwpdb.AsyncStructureParser	csb.bio.io.wwpdb.AsyncStructureParser-class.html
csb.bio.io.wwpdb.AsyncStructureParser.parse_async	csb.bio.io.wwpdb.AsyncStructureParser-class.html#parse_async
csb.bio.io.wwpdb.AsyncStructureParser.parse_structure	csb.bio.io.wwpdb.AsyncStructureParser-class.html#parse_structure
csb.bio.io.wwpdb.AsyncStructureParser._recycle	csb.bio.io.wwpdb.AsyncStructureParser-class.html#_recycle
csb.bio.io.wwpdb.AsyncStructureParser.__init__	csb.bio.io.wwpdb.AsyncStructureParser-class.html#__init__
csb.bio.io.wwpdb.CombinedResidueMapper	csb.bio.io.wwpdb.CombinedResidueMapper-class.html
csb.bio.io.wwpdb.AbstractResidueMapper.__metaclass__	abc.ABCMeta-class.html
csb.bio.io.wwpdb.AbstractResidueMapper._abc_negative_cache	csb.bio.io.wwpdb.AbstractResidueMapper-class.html#_abc_negative_cache
csb.bio.io.wwpdb.AbstractResidueMapper._abc_cache	csb.bio.io.wwpdb.AbstractResidueMapper-class.html#_abc_cache
csb.bio.io.wwpdb.CombinedResidueMapper.__abstractmethods__	csb.bio.io.wwpdb.CombinedResidueMapper-class.html#__abstractmethods__
csb.bio.io.wwpdb.CombinedResidueMapper.FAST	csb.bio.io.wwpdb.CombinedResidueMapper-class.html#FAST
csb.bio.io.wwpdb.CombinedResidueMapper.map	csb.bio.io.wwpdb.CombinedResidueMapper-class.html#map
csb.bio.io.wwpdb.CombinedResidueMapper.ROBUST	csb.bio.io.wwpdb.CombinedResidueMapper-class.html#ROBUST
csb.bio.io.wwpdb.AbstractResidueMapper._build	csb.bio.io.wwpdb.AbstractResidueMapper-class.html#_build
csb.bio.io.wwpdb.AbstractResidueMapper.create_gap	csb.bio.io.wwpdb.AbstractResidueMapper-class.html#create_gap
csb.bio.io.wwpdb.AbstractResidueMapper._abc_negative_cache_version	csb.bio.io.wwpdb.AbstractResidueMapper-class.html#_abc_negative_cache_version
csb.bio.io.wwpdb.AbstractResidueMapper._abc_registry	csb.bio.io.wwpdb.AbstractResidueMapper-class.html#_abc_registry
csb.bio.io.wwpdb.CustomStructureProvider	csb.bio.io.wwpdb.CustomStructureProvider-class.html
csb.bio.io.wwpdb.StructureProvider.__metaclass__	abc.ABCMeta-class.html
csb.bio.io.wwpdb.StructureProvider._abc_negative_cache	csb.bio.io.wwpdb.StructureProvider-class.html#_abc_negative_cache
csb.bio.io.wwpdb.CustomStructureProvider.find	csb.bio.io.wwpdb.CustomStructureProvider-class.html#find
csb.bio.io.wwpdb.CustomStructureProvider.__init__	csb.bio.io.wwpdb.CustomStructureProvider-class.html#__init__
csb.bio.io.wwpdb.StructureProvider._abc_cache	csb.bio.io.wwpdb.StructureProvider-class.html#_abc_cache
csb.bio.io.wwpdb.CustomStructureProvider.paths	csb.bio.io.wwpdb.CustomStructureProvider-class.html#paths
csb.bio.io.wwpdb.CustomStructureProvider.__abstractmethods__	csb.bio.io.wwpdb.CustomStructureProvider-class.html#__abstractmethods__
csb.bio.io.wwpdb.CustomStructureProvider.add	csb.bio.io.wwpdb.CustomStructureProvider-class.html#add
csb.bio.io.wwpdb.StructureProvider.__getitem__	csb.bio.io.wwpdb.StructureProvider-class.html#__getitem__
csb.bio.io.wwpdb.StructureProvider.get	csb.bio.io.wwpdb.StructureProvider-class.html#get
csb.bio.io.wwpdb.CustomStructureProvider.identifiers	csb.bio.io.wwpdb.CustomStructureProvider-class.html#identifiers
csb.bio.io.wwpdb.CustomStructureProvider.remove	csb.bio.io.wwpdb.CustomStructureProvider-class.html#remove
csb.bio.io.wwpdb.StructureProvider._abc_negative_cache_version	csb.bio.io.wwpdb.StructureProvider-class.html#_abc_negative_cache_version
csb.bio.io.wwpdb.StructureProvider._abc_registry	csb.bio.io.wwpdb.StructureProvider-class.html#_abc_registry
csb.bio.io.wwpdb.DegenerateID	csb.bio.io.wwpdb.DegenerateID-class.html
csb.bio.io.wwpdb.EntryID.__metaclass__	abc.ABCMeta-class.html
csb.bio.io.wwpdb.EntryID.chain	csb.bio.io.wwpdb.EntryID-class.html#chain
csb.bio.io.wwpdb.EntryID._abc_negative_cache	csb.bio.io.wwpdb.EntryID-class.html#_abc_negative_cache
csb.bio.io.wwpdb.EntryID.__str__	csb.bio.io.wwpdb.EntryID-class.html#__str__
csb.bio.io.wwpdb.EntryID.accession	csb.bio.io.wwpdb.EntryID-class.html#accession
csb.bio.io.wwpdb.DegenerateID.parse	csb.bio.io.wwpdb.DegenerateID-class.html#parse
csb.bio.io.wwpdb.EntryID.entry_id	csb.bio.io.wwpdb.EntryID-class.html#entry_id
csb.bio.io.wwpdb.EntryID.__init__	csb.bio.io.wwpdb.EntryID-class.html#__init__
csb.bio.io.wwpdb.EntryID._abc_cache	csb.bio.io.wwpdb.EntryID-class.html#_abc_cache
csb.bio.io.wwpdb.EntryID.create	csb.bio.io.wwpdb.EntryID-class.html#create
csb.bio.io.wwpdb.DegenerateID.__abstractmethods__	csb.bio.io.wwpdb.DegenerateID-class.html#__abstractmethods__
csb.bio.io.wwpdb.EntryID.format	csb.bio.io.wwpdb.EntryID-class.html#format
csb.bio.io.wwpdb.EntryID._abc_negative_cache_version	csb.bio.io.wwpdb.EntryID-class.html#_abc_negative_cache_version
csb.bio.io.wwpdb.EntryID._abc_registry	csb.bio.io.wwpdb.EntryID-class.html#_abc_registry
csb.bio.io.wwpdb.EntryID	csb.bio.io.wwpdb.EntryID-class.html
csb.bio.io.wwpdb.EntryID.__metaclass__	abc.ABCMeta-class.html
csb.bio.io.wwpdb.EntryID.chain	csb.bio.io.wwpdb.EntryID-class.html#chain
csb.bio.io.wwpdb.EntryID._abc_negative_cache	csb.bio.io.wwpdb.EntryID-class.html#_abc_negative_cache
csb.bio.io.wwpdb.EntryID.__str__	csb.bio.io.wwpdb.EntryID-class.html#__str__
csb.bio.io.wwpdb.EntryID.accession	csb.bio.io.wwpdb.EntryID-class.html#accession
csb.bio.io.wwpdb.EntryID.parse	csb.bio.io.wwpdb.EntryID-class.html#parse
csb.bio.io.wwpdb.EntryID.entry_id	csb.bio.io.wwpdb.EntryID-class.html#entry_id
csb.bio.io.wwpdb.EntryID.__init__	csb.bio.io.wwpdb.EntryID-class.html#__init__
csb.bio.io.wwpdb.EntryID._abc_cache	csb.bio.io.wwpdb.EntryID-class.html#_abc_cache
csb.bio.io.wwpdb.EntryID.create	csb.bio.io.wwpdb.EntryID-class.html#create
csb.bio.io.wwpdb.EntryID.__abstractmethods__	csb.bio.io.wwpdb.EntryID-class.html#__abstractmethods__
csb.bio.io.wwpdb.EntryID.format	csb.bio.io.wwpdb.EntryID-class.html#format
csb.bio.io.wwpdb.EntryID._abc_negative_cache_version	csb.bio.io.wwpdb.EntryID-class.html#_abc_negative_cache_version
csb.bio.io.wwpdb.EntryID._abc_registry	csb.bio.io.wwpdb.EntryID-class.html#_abc_registry
csb.bio.io.wwpdb.FastResidueMapper	csb.bio.io.wwpdb.FastResidueMapper-class.html
csb.bio.io.wwpdb.AbstractResidueMapper.__metaclass__	abc.ABCMeta-class.html
csb.bio.io.wwpdb.FastResidueMapper.PATTERN	csb.bio.io.wwpdb.FastResidueMapper-class.html#PATTERN
csb.bio.io.wwpdb.FastResidueMapper._encode	csb.bio.io.wwpdb.FastResidueMapper-class.html#_encode
csb.bio.io.wwpdb.FastResidueMapper.CODEC	csb.bio.io.wwpdb.FastResidueMapper-class.html#CODEC
csb.bio.io.wwpdb.FastResidueMapper.__init__	csb.bio.io.wwpdb.FastResidueMapper-class.html#__init__
csb.bio.io.wwpdb.AbstractResidueMapper._abc_cache	csb.bio.io.wwpdb.AbstractResidueMapper-class.html#_abc_cache
csb.bio.io.wwpdb.FastResidueMapper.__abstractmethods__	csb.bio.io.wwpdb.FastResidueMapper-class.html#__abstractmethods__
csb.bio.io.wwpdb.AbstractResidueMapper._abc_negative_cache	csb.bio.io.wwpdb.AbstractResidueMapper-class.html#_abc_negative_cache
csb.bio.io.wwpdb.FastResidueMapper.MAX_FRAGMENTS	csb.bio.io.wwpdb.FastResidueMapper-class.html#MAX_FRAGMENTS
csb.bio.io.wwpdb.FastResidueMapper._encode_sequence	csb.bio.io.wwpdb.FastResidueMapper-class.html#_encode_sequence
csb.bio.io.wwpdb.FastResidueMapper._register_label	csb.bio.io.wwpdb.FastResidueMapper-class.html#_register_label
csb.bio.io.wwpdb.FastResidueMapper.map	csb.bio.io.wwpdb.FastResidueMapper-class.html#map
csb.bio.io.wwpdb.FastResidueMapper.MIN_UNICODE_CHAR	csb.bio.io.wwpdb.FastResidueMapper-class.html#MIN_UNICODE_CHAR
csb.bio.io.wwpdb.FastResidueMapper._build_pattern	csb.bio.io.wwpdb.FastResidueMapper-class.html#_build_pattern
csb.bio.io.wwpdb.FastResidueMapper.DELIMITER	csb.bio.io.wwpdb.FastResidueMapper-class.html#DELIMITER
csb.bio.io.wwpdb.AbstractResidueMapper._build	csb.bio.io.wwpdb.AbstractResidueMapper-class.html#_build
csb.bio.io.wwpdb.FastResidueMapper.FORBIDDEN_CHARS	csb.bio.io.wwpdb.FastResidueMapper-class.html#FORBIDDEN_CHARS
csb.bio.io.wwpdb.AbstractResidueMapper.create_gap	csb.bio.io.wwpdb.AbstractResidueMapper-class.html#create_gap
csb.bio.io.wwpdb.AbstractResidueMapper._abc_negative_cache_version	csb.bio.io.wwpdb.AbstractResidueMapper-class.html#_abc_negative_cache_version
csb.bio.io.wwpdb.AbstractResidueMapper._abc_registry	csb.bio.io.wwpdb.AbstractResidueMapper-class.html#_abc_registry
csb.bio.io.wwpdb.FileBuilder	csb.bio.io.wwpdb.FileBuilder-class.html
csb.bio.io.wwpdb.FileBuilder.__metaclass__	abc.ABCMeta-class.html
csb.bio.io.wwpdb.FileBuilder._abc_negative_cache	csb.bio.io.wwpdb.FileBuilder-class.html#_abc_negative_cache
csb.bio.io.wwpdb.FileBuilder.add_structure	csb.bio.io.wwpdb.FileBuilder-class.html#add_structure
csb.bio.io.wwpdb.FileBuilder.add_header	csb.bio.io.wwpdb.FileBuilder-class.html#add_header
csb.bio.io.wwpdb.FileBuilder.writeline	csb.bio.io.wwpdb.FileBuilder-class.html#writeline
csb.bio.io.wwpdb.FileBuilder.__init__	csb.bio.io.wwpdb.FileBuilder-class.html#__init__
csb.bio.io.wwpdb.FileBuilder._abc_cache	csb.bio.io.wwpdb.FileBuilder-class.html#_abc_cache
csb.bio.io.wwpdb.FileBuilder.__abstractmethods__	csb.bio.io.wwpdb.FileBuilder-class.html#__abstractmethods__
csb.bio.io.wwpdb.FileBuilder.write	csb.bio.io.wwpdb.FileBuilder-class.html#write
csb.bio.io.wwpdb.FileBuilder.finalize	csb.bio.io.wwpdb.FileBuilder-class.html#finalize
csb.bio.io.wwpdb.FileBuilder.isnull	csb.bio.io.wwpdb.FileBuilder-class.html#isnull
csb.bio.io.wwpdb.FileBuilder._abc_negative_cache_version	csb.bio.io.wwpdb.FileBuilder-class.html#_abc_negative_cache_version
csb.bio.io.wwpdb.FileBuilder.output	csb.bio.io.wwpdb.FileBuilder-class.html#output
csb.bio.io.wwpdb.FileBuilder._abc_registry	csb.bio.io.wwpdb.FileBuilder-class.html#_abc_registry
csb.bio.io.wwpdb.FileSystemStructureProvider	csb.bio.io.wwpdb.FileSystemStructureProvider-class.html
csb.bio.io.wwpdb.StructureProvider.__metaclass__	abc.ABCMeta-class.html
csb.bio.io.wwpdb.StructureProvider._abc_negative_cache	csb.bio.io.wwpdb.StructureProvider-class.html#_abc_negative_cache
csb.bio.io.wwpdb.FileSystemStructureProvider.find	csb.bio.io.wwpdb.FileSystemStructureProvider-class.html#find
csb.bio.io.wwpdb.FileSystemStructureProvider.__init__	csb.bio.io.wwpdb.FileSystemStructureProvider-class.html#__init__
csb.bio.io.wwpdb.StructureProvider._abc_cache	csb.bio.io.wwpdb.StructureProvider-class.html#_abc_cache
csb.bio.io.wwpdb.FileSystemStructureProvider.paths	csb.bio.io.wwpdb.FileSystemStructureProvider-class.html#paths
csb.bio.io.wwpdb.FileSystemStructureProvider.add_template	csb.bio.io.wwpdb.FileSystemStructureProvider-class.html#add_template
csb.bio.io.wwpdb.FileSystemStructureProvider.__abstractmethods__	csb.bio.io.wwpdb.FileSystemStructureProvider-class.html#__abstractmethods__
csb.bio.io.wwpdb.FileSystemStructureProvider.add	csb.bio.io.wwpdb.FileSystemStructureProvider-class.html#add
csb.bio.io.wwpdb.FileSystemStructureProvider.templates	csb.bio.io.wwpdb.FileSystemStructureProvider-class.html#templates
csb.bio.io.wwpdb.StructureProvider.__getitem__	csb.bio.io.wwpdb.StructureProvider-class.html#__getitem__
csb.bio.io.wwpdb.StructureProvider.get	csb.bio.io.wwpdb.StructureProvider-class.html#get
csb.bio.io.wwpdb.FileSystemStructureProvider.remove	csb.bio.io.wwpdb.FileSystemStructureProvider-class.html#remove
csb.bio.io.wwpdb.StructureProvider._abc_negative_cache_version	csb.bio.io.wwpdb.StructureProvider-class.html#_abc_negative_cache_version
csb.bio.io.wwpdb.StructureProvider._abc_registry	csb.bio.io.wwpdb.StructureProvider-class.html#_abc_registry
csb.bio.io.wwpdb.HeaderFormatError	csb.bio.io.wwpdb.HeaderFormatError-class.html
csb.bio.io.wwpdb.InvalidEntryIDError	csb.bio.io.wwpdb.InvalidEntryIDError-class.html
csb.bio.io.wwpdb.LegacyStructureParser	csb.bio.io.wwpdb.LegacyStructureParser-class.html
csb.bio.io.wwpdb.AbstractStructureParser._parse_atoms	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_parse_atoms
csb.bio.io.wwpdb.LegacyStructureParser._add_chain	csb.bio.io.wwpdb.LegacyStructureParser-class.html#_add_chain
csb.bio.io.wwpdb.AbstractStructureParser._abc_negative_cache	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_abc_negative_cache
csb.bio.io.wwpdb.AbstractStructureParser.guess_chain_type	csb.bio.io.wwpdb.AbstractStructureParser-class.html#guess_chain_type
csb.bio.io.wwpdb.LegacyStructureParser._map_residues	csb.bio.io.wwpdb.LegacyStructureParser-class.html#_map_residues
csb.bio.io.wwpdb.AbstractStructureParser.parse	csb.bio.io.wwpdb.AbstractStructureParser-class.html#parse
csb.bio.io.wwpdb.AbstractStructureParser._read_atom	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_atom
csb.bio.io.wwpdb.AbstractStructureParser._read_residue	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_residue
csb.bio.io.wwpdb.AbstractStructureParser.__metaclass__	abc.ABCMeta-class.html
csb.bio.io.wwpdb.AbstractStructureParser._read_model	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_model
csb.bio.io.wwpdb.AbstractStructureParser.__init__	csb.bio.io.wwpdb.AbstractStructureParser-class.html#__init__
csb.bio.io.wwpdb.AbstractStructureParser.mapper	csb.bio.io.wwpdb.AbstractStructureParser-class.html#mapper
csb.bio.io.wwpdb.AbstractStructureParser._abc_cache	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_abc_cache
csb.bio.io.wwpdb.AbstractStructureParser._read_residue_raw	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_residue_raw
csb.bio.io.wwpdb.AbstractStructureParser._parse_model_line	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_parse_model_line
csb.bio.io.wwpdb.LegacyStructureParser.__abstractmethods__	csb.bio.io.wwpdb.LegacyStructureParser-class.html#__abstractmethods__
csb.bio.io.wwpdb.AbstractStructureParser.filename	csb.bio.io.wwpdb.AbstractStructureParser-class.html#filename
csb.bio.io.wwpdb.LegacyStructureParser._fix_chain	csb.bio.io.wwpdb.LegacyStructureParser-class.html#_fix_chain
csb.bio.io.wwpdb.AbstractStructureParser.__del__	csb.bio.io.wwpdb.AbstractStructureParser-class.html#__del__
csb.bio.io.wwpdb.AbstractStructureParser._read_chain_id	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_chain_id
csb.bio.io.wwpdb.AbstractStructureParser._scroll_model	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_scroll_model
csb.bio.io.wwpdb.AbstractStructureParser._read_bfactor	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_bfactor
csb.bio.io.wwpdb.AbstractStructureParser.parse_residue_safe	csb.bio.io.wwpdb.AbstractStructureParser-class.html#parse_residue_safe
csb.bio.io.wwpdb.AbstractStructureParser.create_parser	csb.bio.io.wwpdb.AbstractStructureParser-class.html#create_parser
csb.bio.io.wwpdb.AbstractStructureParser.models	csb.bio.io.wwpdb.AbstractStructureParser-class.html#models
csb.bio.io.wwpdb.AbstractStructureParser.parse_residue	csb.bio.io.wwpdb.AbstractStructureParser-class.html#parse_residue
csb.bio.io.wwpdb.AbstractStructureParser.guess_sequence_type	csb.bio.io.wwpdb.AbstractStructureParser-class.html#guess_sequence_type
csb.bio.io.wwpdb.AbstractStructureParser._read_insertion_code	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_insertion_code
csb.bio.io.wwpdb.AbstractStructureParser._parse_remarks	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_parse_remarks
csb.bio.io.wwpdb.AbstractStructureParser._read_sequence_number	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_sequence_number
csb.bio.io.wwpdb.LegacyStructureParser._build_chain	csb.bio.io.wwpdb.LegacyStructureParser-class.html#_build_chain
csb.bio.io.wwpdb.AbstractStructureParser._read_charge	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_charge
csb.bio.io.wwpdb.AbstractStructureParser._parse_atom_line	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_parse_atom_line
csb.bio.io.wwpdb.AbstractStructureParser.parse_models	csb.bio.io.wwpdb.AbstractStructureParser-class.html#parse_models
csb.bio.io.wwpdb.AbstractStructureParser._read_occupancy	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_occupancy
csb.bio.io.wwpdb.AbstractStructureParser._read_element	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_element
csb.bio.io.wwpdb.AbstractStructureParser._parse_ss	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_parse_ss
csb.bio.io.wwpdb.AbstractStructureParser.parse_biomolecule	csb.bio.io.wwpdb.AbstractStructureParser-class.html#parse_biomolecule
csb.bio.io.wwpdb.LegacyStructureParser._parse_header	csb.bio.io.wwpdb.LegacyStructureParser-class.html#_parse_header
csb.bio.io.wwpdb.AbstractStructureParser._abc_negative_cache_version	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_abc_negative_cache_version
csb.bio.io.wwpdb.AbstractStructureParser.parse_structure	csb.bio.io.wwpdb.AbstractStructureParser-class.html#parse_structure
csb.bio.io.wwpdb.AbstractStructureParser._read_alternate	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_alternate
csb.bio.io.wwpdb.AbstractStructureParser._abc_registry	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_abc_registry
csb.bio.io.wwpdb.PDBEnsembleFileBuilder	csb.bio.io.wwpdb.PDBEnsembleFileBuilder-class.html
csb.bio.io.wwpdb.FileBuilder.__metaclass__	abc.ABCMeta-class.html
csb.bio.io.wwpdb.FileBuilder._abc_negative_cache	csb.bio.io.wwpdb.FileBuilder-class.html#_abc_negative_cache
csb.bio.io.wwpdb.PDBEnsembleFileBuilder.add_structure	csb.bio.io.wwpdb.PDBEnsembleFileBuilder-class.html#add_structure
csb.bio.io.wwpdb.FileBuilder.isnull	csb.bio.io.wwpdb.FileBuilder-class.html#isnull
csb.bio.io.wwpdb.PDBFileBuilder.writeline	csb.bio.io.wwpdb.PDBFileBuilder-class.html#writeline
csb.bio.io.wwpdb.FileBuilder.__init__	csb.bio.io.wwpdb.FileBuilder-class.html#__init__
csb.bio.io.wwpdb.FileBuilder._abc_cache	csb.bio.io.wwpdb.FileBuilder-class.html#_abc_cache
csb.bio.io.wwpdb.PDBFileBuilder.__abstractmethods__	csb.bio.io.wwpdb.PDBFileBuilder-class.html#__abstractmethods__
csb.bio.io.wwpdb.FileBuilder.write	csb.bio.io.wwpdb.FileBuilder-class.html#write
csb.bio.io.wwpdb.PDBFileBuilder.finalize	csb.bio.io.wwpdb.PDBFileBuilder-class.html#finalize
csb.bio.io.wwpdb.PDBFileBuilder.add_header	csb.bio.io.wwpdb.PDBFileBuilder-class.html#add_header
csb.bio.io.wwpdb.FileBuilder._abc_negative_cache_version	csb.bio.io.wwpdb.FileBuilder-class.html#_abc_negative_cache_version
csb.bio.io.wwpdb.FileBuilder.output	csb.bio.io.wwpdb.FileBuilder-class.html#output
csb.bio.io.wwpdb.FileBuilder._abc_registry	csb.bio.io.wwpdb.FileBuilder-class.html#_abc_registry
csb.bio.io.wwpdb.PDBFileBuilder	csb.bio.io.wwpdb.PDBFileBuilder-class.html
csb.bio.io.wwpdb.FileBuilder.__metaclass__	abc.ABCMeta-class.html
csb.bio.io.wwpdb.FileBuilder._abc_negative_cache	csb.bio.io.wwpdb.FileBuilder-class.html#_abc_negative_cache
csb.bio.io.wwpdb.PDBFileBuilder.add_structure	csb.bio.io.wwpdb.PDBFileBuilder-class.html#add_structure
csb.bio.io.wwpdb.FileBuilder.isnull	csb.bio.io.wwpdb.FileBuilder-class.html#isnull
csb.bio.io.wwpdb.PDBFileBuilder.writeline	csb.bio.io.wwpdb.PDBFileBuilder-class.html#writeline
csb.bio.io.wwpdb.FileBuilder.__init__	csb.bio.io.wwpdb.FileBuilder-class.html#__init__
csb.bio.io.wwpdb.FileBuilder._abc_cache	csb.bio.io.wwpdb.FileBuilder-class.html#_abc_cache
csb.bio.io.wwpdb.PDBFileBuilder.__abstractmethods__	csb.bio.io.wwpdb.PDBFileBuilder-class.html#__abstractmethods__
csb.bio.io.wwpdb.FileBuilder.write	csb.bio.io.wwpdb.FileBuilder-class.html#write
csb.bio.io.wwpdb.PDBFileBuilder.finalize	csb.bio.io.wwpdb.PDBFileBuilder-class.html#finalize
csb.bio.io.wwpdb.PDBFileBuilder.add_header	csb.bio.io.wwpdb.PDBFileBuilder-class.html#add_header
csb.bio.io.wwpdb.FileBuilder._abc_negative_cache_version	csb.bio.io.wwpdb.FileBuilder-class.html#_abc_negative_cache_version
csb.bio.io.wwpdb.FileBuilder.output	csb.bio.io.wwpdb.FileBuilder-class.html#output
csb.bio.io.wwpdb.FileBuilder._abc_registry	csb.bio.io.wwpdb.FileBuilder-class.html#_abc_registry
csb.bio.io.wwpdb.PDBHeaderParser	csb.bio.io.wwpdb.PDBHeaderParser-class.html
csb.bio.io.wwpdb.PDBHeaderParser._parse_atoms	csb.bio.io.wwpdb.PDBHeaderParser-class.html#_parse_atoms
csb.bio.io.wwpdb.AbstractStructureParser.__metaclass__	abc.ABCMeta-class.html
csb.bio.io.wwpdb.AbstractStructureParser._abc_negative_cache	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_abc_negative_cache
csb.bio.io.wwpdb.AbstractStructureParser.guess_chain_type	csb.bio.io.wwpdb.AbstractStructureParser-class.html#guess_chain_type
csb.bio.io.wwpdb.AbstractStructureParser._map_residues	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_map_residues
csb.bio.io.wwpdb.AbstractStructureParser.parse	csb.bio.io.wwpdb.AbstractStructureParser-class.html#parse
csb.bio.io.wwpdb.AbstractStructureParser._read_atom	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_atom
csb.bio.io.wwpdb.AbstractStructureParser._read_residue	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_residue
csb.bio.io.wwpdb.RegularStructureParser._parse_seqres_line	csb.bio.io.wwpdb.RegularStructureParser-class.html#_parse_seqres_line
csb.bio.io.wwpdb.AbstractStructureParser._read_model	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_model
csb.bio.io.wwpdb.AbstractStructureParser.__init__	csb.bio.io.wwpdb.AbstractStructureParser-class.html#__init__
csb.bio.io.wwpdb.AbstractStructureParser.mapper	csb.bio.io.wwpdb.AbstractStructureParser-class.html#mapper
csb.bio.io.wwpdb.AbstractStructureParser._abc_cache	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_abc_cache
csb.bio.io.wwpdb.AbstractStructureParser._read_residue_raw	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_residue_raw
csb.bio.io.wwpdb.AbstractStructureParser._parse_model_line	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_parse_model_line
csb.bio.io.wwpdb.RegularStructureParser.__abstractmethods__	csb.bio.io.wwpdb.RegularStructureParser-class.html#__abstractmethods__
csb.bio.io.wwpdb.AbstractStructureParser.filename	csb.bio.io.wwpdb.AbstractStructureParser-class.html#filename
csb.bio.io.wwpdb.AbstractStructureParser.__del__	csb.bio.io.wwpdb.AbstractStructureParser-class.html#__del__
csb.bio.io.wwpdb.AbstractStructureParser._read_chain_id	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_chain_id
csb.bio.io.wwpdb.AbstractStructureParser._scroll_model	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_scroll_model
csb.bio.io.wwpdb.AbstractStructureParser._read_bfactor	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_bfactor
csb.bio.io.wwpdb.AbstractStructureParser.parse_residue_safe	csb.bio.io.wwpdb.AbstractStructureParser-class.html#parse_residue_safe
csb.bio.io.wwpdb.AbstractStructureParser.create_parser	csb.bio.io.wwpdb.AbstractStructureParser-class.html#create_parser
csb.bio.io.wwpdb.AbstractStructureParser.models	csb.bio.io.wwpdb.AbstractStructureParser-class.html#models
csb.bio.io.wwpdb.AbstractStructureParser.parse_residue	csb.bio.io.wwpdb.AbstractStructureParser-class.html#parse_residue
csb.bio.io.wwpdb.AbstractStructureParser.guess_sequence_type	csb.bio.io.wwpdb.AbstractStructureParser-class.html#guess_sequence_type
csb.bio.io.wwpdb.AbstractStructureParser._read_insertion_code	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_insertion_code
csb.bio.io.wwpdb.AbstractStructureParser._parse_remarks	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_parse_remarks
csb.bio.io.wwpdb.RegularStructureParser._add_chains	csb.bio.io.wwpdb.RegularStructureParser-class.html#_add_chains
csb.bio.io.wwpdb.AbstractStructureParser._read_sequence_number	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_sequence_number
csb.bio.io.wwpdb.AbstractStructureParser._read_charge	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_charge
csb.bio.io.wwpdb.AbstractStructureParser._parse_atom_line	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_parse_atom_line
csb.bio.io.wwpdb.AbstractStructureParser.parse_models	csb.bio.io.wwpdb.AbstractStructureParser-class.html#parse_models
csb.bio.io.wwpdb.AbstractStructureParser._read_occupancy	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_occupancy
csb.bio.io.wwpdb.AbstractStructureParser._read_element	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_element
csb.bio.io.wwpdb.AbstractStructureParser._abc_registry	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_abc_registry
csb.bio.io.wwpdb.PDBHeaderParser._parse_ss	csb.bio.io.wwpdb.PDBHeaderParser-class.html#_parse_ss
csb.bio.io.wwpdb.AbstractStructureParser.parse_biomolecule	csb.bio.io.wwpdb.AbstractStructureParser-class.html#parse_biomolecule
csb.bio.io.wwpdb.PDBHeaderParser._parse_header	csb.bio.io.wwpdb.PDBHeaderParser-class.html#_parse_header
csb.bio.io.wwpdb.AbstractStructureParser._abc_negative_cache_version	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_abc_negative_cache_version
csb.bio.io.wwpdb.AbstractStructureParser.parse_structure	csb.bio.io.wwpdb.AbstractStructureParser-class.html#parse_structure
csb.bio.io.wwpdb.AbstractStructureParser._read_alternate	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_alternate
csb.bio.io.wwpdb.RegularStructureParser._read_resolution	csb.bio.io.wwpdb.RegularStructureParser-class.html#_read_resolution
csb.bio.io.wwpdb.PDBParseError	csb.bio.io.wwpdb.PDBParseError-class.html
csb.bio.io.wwpdb.RegularStructureParser	csb.bio.io.wwpdb.RegularStructureParser-class.html
csb.bio.io.wwpdb.AbstractStructureParser._parse_atoms	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_parse_atoms
csb.bio.io.wwpdb.AbstractStructureParser.__metaclass__	abc.ABCMeta-class.html
csb.bio.io.wwpdb.AbstractStructureParser._abc_negative_cache	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_abc_negative_cache
csb.bio.io.wwpdb.AbstractStructureParser.guess_chain_type	csb.bio.io.wwpdb.AbstractStructureParser-class.html#guess_chain_type
csb.bio.io.wwpdb.AbstractStructureParser._map_residues	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_map_residues
csb.bio.io.wwpdb.AbstractStructureParser.parse	csb.bio.io.wwpdb.AbstractStructureParser-class.html#parse
csb.bio.io.wwpdb.AbstractStructureParser._read_atom	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_atom
csb.bio.io.wwpdb.AbstractStructureParser._read_residue	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_residue
csb.bio.io.wwpdb.RegularStructureParser._parse_seqres_line	csb.bio.io.wwpdb.RegularStructureParser-class.html#_parse_seqres_line
csb.bio.io.wwpdb.AbstractStructureParser._read_model	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_model
csb.bio.io.wwpdb.AbstractStructureParser.__init__	csb.bio.io.wwpdb.AbstractStructureParser-class.html#__init__
csb.bio.io.wwpdb.AbstractStructureParser.mapper	csb.bio.io.wwpdb.AbstractStructureParser-class.html#mapper
csb.bio.io.wwpdb.AbstractStructureParser._abc_cache	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_abc_cache
csb.bio.io.wwpdb.AbstractStructureParser._read_residue_raw	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_residue_raw
csb.bio.io.wwpdb.AbstractStructureParser._parse_model_line	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_parse_model_line
csb.bio.io.wwpdb.RegularStructureParser.__abstractmethods__	csb.bio.io.wwpdb.RegularStructureParser-class.html#__abstractmethods__
csb.bio.io.wwpdb.AbstractStructureParser.filename	csb.bio.io.wwpdb.AbstractStructureParser-class.html#filename
csb.bio.io.wwpdb.AbstractStructureParser.__del__	csb.bio.io.wwpdb.AbstractStructureParser-class.html#__del__
csb.bio.io.wwpdb.AbstractStructureParser._read_chain_id	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_chain_id
csb.bio.io.wwpdb.AbstractStructureParser._scroll_model	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_scroll_model
csb.bio.io.wwpdb.AbstractStructureParser._read_bfactor	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_bfactor
csb.bio.io.wwpdb.AbstractStructureParser.parse_residue_safe	csb.bio.io.wwpdb.AbstractStructureParser-class.html#parse_residue_safe
csb.bio.io.wwpdb.AbstractStructureParser.create_parser	csb.bio.io.wwpdb.AbstractStructureParser-class.html#create_parser
csb.bio.io.wwpdb.AbstractStructureParser.models	csb.bio.io.wwpdb.AbstractStructureParser-class.html#models
csb.bio.io.wwpdb.AbstractStructureParser.parse_residue	csb.bio.io.wwpdb.AbstractStructureParser-class.html#parse_residue
csb.bio.io.wwpdb.AbstractStructureParser.guess_sequence_type	csb.bio.io.wwpdb.AbstractStructureParser-class.html#guess_sequence_type
csb.bio.io.wwpdb.AbstractStructureParser._read_insertion_code	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_insertion_code
csb.bio.io.wwpdb.AbstractStructureParser._parse_remarks	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_parse_remarks
csb.bio.io.wwpdb.RegularStructureParser._add_chains	csb.bio.io.wwpdb.RegularStructureParser-class.html#_add_chains
csb.bio.io.wwpdb.AbstractStructureParser._read_sequence_number	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_sequence_number
csb.bio.io.wwpdb.AbstractStructureParser._read_charge	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_charge
csb.bio.io.wwpdb.AbstractStructureParser._parse_atom_line	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_parse_atom_line
csb.bio.io.wwpdb.AbstractStructureParser.parse_models	csb.bio.io.wwpdb.AbstractStructureParser-class.html#parse_models
csb.bio.io.wwpdb.AbstractStructureParser._read_occupancy	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_occupancy
csb.bio.io.wwpdb.AbstractStructureParser._read_element	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_element
csb.bio.io.wwpdb.AbstractStructureParser._abc_registry	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_abc_registry
csb.bio.io.wwpdb.AbstractStructureParser._parse_ss	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_parse_ss
csb.bio.io.wwpdb.AbstractStructureParser.parse_biomolecule	csb.bio.io.wwpdb.AbstractStructureParser-class.html#parse_biomolecule
csb.bio.io.wwpdb.RegularStructureParser._parse_header	csb.bio.io.wwpdb.RegularStructureParser-class.html#_parse_header
csb.bio.io.wwpdb.AbstractStructureParser._abc_negative_cache_version	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_abc_negative_cache_version
csb.bio.io.wwpdb.AbstractStructureParser.parse_structure	csb.bio.io.wwpdb.AbstractStructureParser-class.html#parse_structure
csb.bio.io.wwpdb.AbstractStructureParser._read_alternate	csb.bio.io.wwpdb.AbstractStructureParser-class.html#_read_alternate
csb.bio.io.wwpdb.RegularStructureParser._read_resolution	csb.bio.io.wwpdb.RegularStructureParser-class.html#_read_resolution
csb.bio.io.wwpdb.RemoteStructureProvider	csb.bio.io.wwpdb.RemoteStructureProvider-class.html
csb.bio.io.wwpdb.StructureProvider.__metaclass__	abc.ABCMeta-class.html
csb.bio.io.wwpdb.RemoteStructureProvider.suffix	csb.bio.io.wwpdb.RemoteStructureProvider-class.html#suffix
csb.bio.io.wwpdb.StructureProvider._abc_negative_cache	csb.bio.io.wwpdb.StructureProvider-class.html#_abc_negative_cache
csb.bio.io.wwpdb.RemoteStructureProvider.prefix	csb.bio.io.wwpdb.RemoteStructureProvider-class.html#prefix
csb.bio.io.wwpdb.RemoteStructureProvider._find	csb.bio.io.wwpdb.RemoteStructureProvider-class.html#_find
csb.bio.io.wwpdb.RemoteStructureProvider.find	csb.bio.io.wwpdb.RemoteStructureProvider-class.html#find
csb.bio.io.wwpdb.RemoteStructureProvider.__init__	csb.bio.io.wwpdb.RemoteStructureProvider-class.html#__init__
csb.bio.io.wwpdb.StructureProvider._abc_cache	csb.bio.io.wwpdb.StructureProvider-class.html#_abc_cache
csb.bio.io.wwpdb.RemoteStructureProvider.__abstractmethods__	csb.bio.io.wwpdb.RemoteStructureProvider-class.html#__abstractmethods__
csb.bio.io.wwpdb.StructureProvider.__getitem__	csb.bio.io.wwpdb.StructureProvider-class.html#__getitem__
csb.bio.io.wwpdb.RemoteStructureProvider.get	csb.bio.io.wwpdb.RemoteStructureProvider-class.html#get
csb.bio.io.wwpdb.StructureProvider._abc_negative_cache_version	csb.bio.io.wwpdb.StructureProvider-class.html#_abc_negative_cache_version
csb.bio.io.wwpdb.StructureProvider._abc_registry	csb.bio.io.wwpdb.StructureProvider-class.html#_abc_registry
csb.bio.io.wwpdb.ResidueInfo	csb.bio.io.wwpdb.ResidueInfo-class.html
csb.bio.io.wwpdb.ResidueInfo.chain	csb.bio.io.wwpdb.ResidueInfo-class.html#chain
csb.bio.io.wwpdb.ResidueInfo.insertion_code	csb.bio.io.wwpdb.ResidueInfo-class.html#insertion_code
csb.bio.io.wwpdb.ResidueInfo.rank	csb.bio.io.wwpdb.ResidueInfo-class.html#rank
csb.bio.io.wwpdb.ResidueInfo.id	csb.bio.io.wwpdb.ResidueInfo-class.html#id
csb.bio.io.wwpdb.ResidueInfo.__init__	csb.bio.io.wwpdb.ResidueInfo-class.html#__init__
csb.bio.io.wwpdb.ResidueInfo.label	csb.bio.io.wwpdb.ResidueInfo-class.html#label
csb.bio.io.wwpdb.ResidueInfo.type	csb.bio.io.wwpdb.ResidueInfo-class.html#type
csb.bio.io.wwpdb.ResidueInfo.is_modified	csb.bio.io.wwpdb.ResidueInfo-class.html#is_modified
csb.bio.io.wwpdb.ResidueInfo.atoms	csb.bio.io.wwpdb.ResidueInfo-class.html#atoms
csb.bio.io.wwpdb.ResidueInfo.sequence_number	csb.bio.io.wwpdb.ResidueInfo-class.html#sequence_number
csb.bio.io.wwpdb.ResidueMappingError	csb.bio.io.wwpdb.ResidueMappingError-class.html
csb.bio.io.wwpdb.RobustResidueMapper	csb.bio.io.wwpdb.RobustResidueMapper-class.html
csb.bio.io.wwpdb.AbstractResidueMapper.__metaclass__	abc.ABCMeta-class.html
csb.bio.io.wwpdb.AbstractResidueMapper._abc_negative_cache	csb.bio.io.wwpdb.AbstractResidueMapper-class.html#_abc_negative_cache
csb.bio.io.wwpdb.RobustResidueMapper.GlobalAligner	csb.bio.io.wwpdb.RobustResidueMapper.GlobalAligner-class.html
csb.bio.io.wwpdb.RobustResidueMapper.__init__	csb.bio.io.wwpdb.RobustResidueMapper-class.html#__init__
csb.bio.io.wwpdb.AbstractResidueMapper._abc_cache	csb.bio.io.wwpdb.AbstractResidueMapper-class.html#_abc_cache
csb.bio.io.wwpdb.RobustResidueMapper.__abstractmethods__	csb.bio.io.wwpdb.RobustResidueMapper-class.html#__abstractmethods__
csb.bio.io.wwpdb.RobustResidueMapper.map	csb.bio.io.wwpdb.RobustResidueMapper-class.html#map
csb.bio.io.wwpdb.AbstractResidueMapper._build	csb.bio.io.wwpdb.AbstractResidueMapper-class.html#_build
csb.bio.io.wwpdb.AbstractResidueMapper.create_gap	csb.bio.io.wwpdb.AbstractResidueMapper-class.html#create_gap
csb.bio.io.wwpdb.AbstractResidueMapper._abc_negative_cache_version	csb.bio.io.wwpdb.AbstractResidueMapper-class.html#_abc_negative_cache_version
csb.bio.io.wwpdb.AbstractResidueMapper._abc_registry	csb.bio.io.wwpdb.AbstractResidueMapper-class.html#_abc_registry
csb.bio.io.wwpdb.RobustResidueMapper.GlobalAligner	csb.bio.io.wwpdb.RobustResidueMapper.GlobalAligner-class.html
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm.__metaclass__	abc.ABCMeta-class.html
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm._fill	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#_fill
csb.bio.sequence.alignment.GlobalAlignmentAlgorithm._expandable	csb.bio.sequence.alignment.GlobalAlignmentAlgorithm-class.html#_expandable
csb.bio.io.wwpdb.RobustResidueMapper.GlobalAligner._sequence	csb.bio.io.wwpdb.RobustResidueMapper.GlobalAligner-class.html#_sequence
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm._abc_negative_cache	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#_abc_negative_cache
csb.bio.sequence.alignment.GlobalAlignmentAlgorithm.__init__	csb.bio.sequence.alignment.GlobalAlignmentAlgorithm-class.html#__init__
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm._abc_cache	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#_abc_cache
csb.bio.sequence.alignment.GlobalAlignmentAlgorithm._terminus	csb.bio.sequence.alignment.GlobalAlignmentAlgorithm-class.html#_terminus
csb.bio.sequence.alignment.GlobalAlignmentAlgorithm.__abstractmethods__	csb.bio.sequence.alignment.GlobalAlignmentAlgorithm-class.html#__abstractmethods__
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm._traceback	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#_traceback
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm._score	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#_score
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm.scoring_matrix	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#scoring_matrix
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm.gap	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#gap
csb.bio.sequence.alignment.GlobalAlignmentAlgorithm._initialize	csb.bio.sequence.alignment.GlobalAlignmentAlgorithm-class.html#_initialize
csb.bio.sequence.alignment.GlobalAlignmentAlgorithm._max	csb.bio.sequence.alignment.GlobalAlignmentAlgorithm-class.html#_max
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm._abc_negative_cache_version	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#_abc_negative_cache_version
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm._abc_registry	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#_abc_registry
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm.align	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#align
csb.bio.io.wwpdb.SecStructureFormatError	csb.bio.io.wwpdb.SecStructureFormatError-class.html
csb.bio.io.wwpdb.SeqResID	csb.bio.io.wwpdb.SeqResID-class.html
csb.bio.io.wwpdb.EntryID.__metaclass__	abc.ABCMeta-class.html
csb.bio.io.wwpdb.EntryID.chain	csb.bio.io.wwpdb.EntryID-class.html#chain
csb.bio.io.wwpdb.EntryID._abc_negative_cache	csb.bio.io.wwpdb.EntryID-class.html#_abc_negative_cache
csb.bio.io.wwpdb.EntryID.__str__	csb.bio.io.wwpdb.EntryID-class.html#__str__
csb.bio.io.wwpdb.EntryID.accession	csb.bio.io.wwpdb.EntryID-class.html#accession
csb.bio.io.wwpdb.SeqResID.parse	csb.bio.io.wwpdb.SeqResID-class.html#parse
csb.bio.io.wwpdb.EntryID.entry_id	csb.bio.io.wwpdb.EntryID-class.html#entry_id
csb.bio.io.wwpdb.EntryID.__init__	csb.bio.io.wwpdb.EntryID-class.html#__init__
csb.bio.io.wwpdb.EntryID._abc_cache	csb.bio.io.wwpdb.EntryID-class.html#_abc_cache
csb.bio.io.wwpdb.EntryID.create	csb.bio.io.wwpdb.EntryID-class.html#create
csb.bio.io.wwpdb.SeqResID.__abstractmethods__	csb.bio.io.wwpdb.SeqResID-class.html#__abstractmethods__
csb.bio.io.wwpdb.SeqResID.format	csb.bio.io.wwpdb.SeqResID-class.html#format
csb.bio.io.wwpdb.EntryID._abc_negative_cache_version	csb.bio.io.wwpdb.EntryID-class.html#_abc_negative_cache_version
csb.bio.io.wwpdb.EntryID._abc_registry	csb.bio.io.wwpdb.EntryID-class.html#_abc_registry
csb.bio.io.wwpdb.SparseChainSequence	csb.bio.io.wwpdb.SparseChainSequence-class.html
csb.bio.sequence.AbstractSequence.__metaclass__	abc.ABCMeta-class.html
csb.bio.sequence.AbstractSequence.dump	csb.bio.sequence.AbstractSequence-class.html#dump
csb.bio.sequence.AbstractSequence.sequence	csb.bio.sequence.AbstractSequence-class.html#sequence
csb.bio.sequence.AbstractSequence._abc_negative_cache	csb.bio.sequence.AbstractSequence-class.html#_abc_negative_cache
csb.bio.sequence.AbstractSequence.__str__	csb.bio.sequence.AbstractSequence-class.html#__str__
csb.bio.sequence.AbstractSequence._factory	csb.bio.sequence.AbstractSequence-class.html#_factory
csb.bio.io.wwpdb.SparseChainSequence._add	csb.bio.io.wwpdb.SparseChainSequence-class.html#_add
csb.bio.sequence.AbstractSequence.header	csb.bio.sequence.AbstractSequence-class.html#header
csb.bio.sequence.AbstractSequence.subregion	csb.bio.sequence.AbstractSequence-class.html#subregion
csb.bio.sequence.AbstractSequence.strip	csb.bio.sequence.AbstractSequence-class.html#strip
csb.bio.sequence.AbstractSequence.extract	csb.bio.sequence.AbstractSequence-class.html#extract
csb.bio.sequence.AbstractSequence.id	csb.bio.sequence.AbstractSequence-class.html#id
csb.bio.sequence.AbstractSequence.__init__	csb.bio.sequence.AbstractSequence-class.html#__init__
csb.bio.sequence.AbstractSequence._abc_cache	csb.bio.sequence.AbstractSequence-class.html#_abc_cache
csb.bio.sequence.AbstractSequence.alphabet	csb.bio.sequence.AbstractSequence-class.html#alphabet
csb.bio.io.wwpdb.SparseChainSequence.create	csb.bio.io.wwpdb.SparseChainSequence-class.html#create
csb.bio.sequence.ChainSequence.__abstractmethods__	csb.bio.sequence.ChainSequence-class.html#__abstractmethods__
csb.bio.sequence.AbstractSequence.type	csb.bio.sequence.AbstractSequence-class.html#type
csb.bio.sequence.AbstractSequence.__len__	csb.bio.sequence.AbstractSequence-class.html#__len__
csb.bio.sequence.AbstractSequence.__getitem__	csb.bio.sequence.AbstractSequence-class.html#__getitem__
csb.bio.sequence.AbstractSequence.residues	csb.bio.sequence.AbstractSequence-class.html#residues
csb.bio.io.wwpdb.SparseChainSequence._get	csb.bio.io.wwpdb.SparseChainSequence-class.html#_get
csb.bio.sequence.AbstractSequence.DELIMITER	csb.bio.sequence.AbstractSequence-class.html#DELIMITER
csb.bio.sequence.AbstractSequence.__iter__	csb.bio.sequence.AbstractSequence-class.html#__iter__
csb.bio.sequence.AbstractSequence.length	csb.bio.sequence.AbstractSequence-class.html#length
csb.bio.sequence.AbstractSequence._abc_negative_cache_version	csb.bio.sequence.AbstractSequence-class.html#_abc_negative_cache_version
csb.bio.sequence.AbstractSequence.__repr__	csb.bio.sequence.AbstractSequence-class.html#__repr__
csb.bio.sequence.AbstractSequence._abc_registry	csb.bio.sequence.AbstractSequence-class.html#_abc_registry
csb.bio.io.wwpdb.StandardID	csb.bio.io.wwpdb.StandardID-class.html
csb.bio.io.wwpdb.EntryID.__metaclass__	abc.ABCMeta-class.html
csb.bio.io.wwpdb.EntryID.chain	csb.bio.io.wwpdb.EntryID-class.html#chain
csb.bio.io.wwpdb.EntryID._abc_negative_cache	csb.bio.io.wwpdb.EntryID-class.html#_abc_negative_cache
csb.bio.io.wwpdb.EntryID.__str__	csb.bio.io.wwpdb.EntryID-class.html#__str__
csb.bio.io.wwpdb.EntryID.accession	csb.bio.io.wwpdb.EntryID-class.html#accession
csb.bio.io.wwpdb.StandardID.parse	csb.bio.io.wwpdb.StandardID-class.html#parse
csb.bio.io.wwpdb.EntryID.entry_id	csb.bio.io.wwpdb.EntryID-class.html#entry_id
csb.bio.io.wwpdb.EntryID.__init__	csb.bio.io.wwpdb.EntryID-class.html#__init__
csb.bio.io.wwpdb.EntryID._abc_cache	csb.bio.io.wwpdb.EntryID-class.html#_abc_cache
csb.bio.io.wwpdb.EntryID.create	csb.bio.io.wwpdb.EntryID-class.html#create
csb.bio.io.wwpdb.StandardID.__abstractmethods__	csb.bio.io.wwpdb.StandardID-class.html#__abstractmethods__
csb.bio.io.wwpdb.EntryID.format	csb.bio.io.wwpdb.EntryID-class.html#format
csb.bio.io.wwpdb.EntryID._abc_negative_cache_version	csb.bio.io.wwpdb.EntryID-class.html#_abc_negative_cache_version
csb.bio.io.wwpdb.EntryID._abc_registry	csb.bio.io.wwpdb.EntryID-class.html#_abc_registry
csb.bio.io.wwpdb.StructureFormatError	csb.bio.io.wwpdb.StructureFormatError-class.html
csb.bio.io.wwpdb.StructureNotFoundError	csb.bio.io.wwpdb.StructureNotFoundError-class.html
csb.bio.io.wwpdb.StructureProvider	csb.bio.io.wwpdb.StructureProvider-class.html
csb.bio.io.wwpdb.StructureProvider.__metaclass__	abc.ABCMeta-class.html
csb.bio.io.wwpdb.StructureProvider._abc_negative_cache	csb.bio.io.wwpdb.StructureProvider-class.html#_abc_negative_cache
csb.bio.io.wwpdb.StructureProvider.find	csb.bio.io.wwpdb.StructureProvider-class.html#find
csb.bio.io.wwpdb.StructureProvider._abc_cache	csb.bio.io.wwpdb.StructureProvider-class.html#_abc_cache
csb.bio.io.wwpdb.StructureProvider.__abstractmethods__	csb.bio.io.wwpdb.StructureProvider-class.html#__abstractmethods__
csb.bio.io.wwpdb.StructureProvider.__getitem__	csb.bio.io.wwpdb.StructureProvider-class.html#__getitem__
csb.bio.io.wwpdb.StructureProvider.get	csb.bio.io.wwpdb.StructureProvider-class.html#get
csb.bio.io.wwpdb.StructureProvider._abc_negative_cache_version	csb.bio.io.wwpdb.StructureProvider-class.html#_abc_negative_cache_version
csb.bio.io.wwpdb.StructureProvider._abc_registry	csb.bio.io.wwpdb.StructureProvider-class.html#_abc_registry
csb.bio.io.wwpdb.UnknownPDBResidueError	csb.bio.io.wwpdb.UnknownPDBResidueError-class.html
csb.bio.nmr.AtomConnectivity	csb.bio.nmr.AtomConnectivity-class.html
csb.bio.nmr.AtomConnectivity.__init__	csb.bio.nmr.AtomConnectivity-class.html#__init__
csb.bio.nmr.AtomConnectivity.contains	csb.bio.nmr.AtomConnectivity-class.html#contains
csb.bio.nmr.AtomConnectivity.get	csb.bio.nmr.AtomConnectivity-class.html#get
csb.bio.nmr.AtomConnectivity.connected_atoms	csb.bio.nmr.AtomConnectivity-class.html#connected_atoms
csb.bio.nmr.AtomConnectivity.get_atoms	csb.bio.nmr.AtomConnectivity-class.html#get_atoms
csb.bio.nmr.AtomConnectivity.connected	csb.bio.nmr.AtomConnectivity-class.html#connected
csb.bio.nmr.AtomConnectivity.RESOURCES	csb.bio.nmr.AtomConnectivity-class.html#RESOURCES
csb.bio.nmr.AtomConnectivity._instance	csb.bio.nmr.AtomConnectivity-class.html#_instance
csb.bio.nmr.AtomConnectivity._initialize	csb.bio.nmr.AtomConnectivity-class.html#_initialize
csb.bio.nmr.ChemShiftInfo	csb.bio.nmr.ChemShiftInfo-class.html
csb.bio.nmr.ChemShiftInfo.clone	csb.bio.nmr.ChemShiftInfo-class.html#clone
csb.bio.nmr.ChemShiftInfo.label	csb.bio.nmr.ChemShiftInfo-class.html#label
csb.bio.nmr.ChemShiftInfo.__str__	csb.bio.nmr.ChemShiftInfo-class.html#__str__
csb.bio.nmr.ChemShiftInfo.__init__	csb.bio.nmr.ChemShiftInfo-class.html#__init__
csb.bio.nmr.ChemShiftScoringModel	csb.bio.nmr.ChemShiftScoringModel-class.html
csb.bio.nmr.ChemShiftScoringModel.positive	csb.bio.nmr.ChemShiftScoringModel-class.html#positive
csb.bio.nmr.ChemShiftScoringModel.negative	csb.bio.nmr.ChemShiftScoringModel-class.html#negative
csb.bio.nmr.ChemShiftScoringModel.score	csb.bio.nmr.ChemShiftScoringModel-class.html#score
csb.bio.nmr.ChemShiftScoringModel.NUCLEI	csb.bio.nmr.ChemShiftScoringModel-class.html#NUCLEI
csb.bio.nmr.ChemShiftScoringModel.__init__	csb.bio.nmr.ChemShiftScoringModel-class.html#__init__
csb.bio.nmr.ChemicalShiftNetwork	csb.bio.nmr.ChemicalShiftNetwork-class.html
csb.bio.nmr.ChemicalShiftNetwork.connected_shifts	csb.bio.nmr.ChemicalShiftNetwork-class.html#connected_shifts
csb.bio.nmr.ChemicalShiftNetwork.__iter__	csb.bio.nmr.ChemicalShiftNetwork-class.html#__iter__
csb.bio.nmr.ChemicalShiftNetwork.connect	csb.bio.nmr.ChemicalShiftNetwork-class.html#connect
csb.bio.nmr.ChemicalShiftNetwork.__init__	csb.bio.nmr.ChemicalShiftNetwork-class.html#__init__
csb.bio.nmr.ContactMap	csb.bio.nmr.ContactMap-class.html
csb.bio.nmr.ContactMap.load	csb.bio.nmr.ContactMap-class.html#load
csb.bio.nmr.ContactMap.cutoff	csb.bio.nmr.ContactMap-class.html#cutoff
csb.bio.nmr.ContactMap.compare	csb.bio.nmr.ContactMap-class.html#compare
csb.bio.nmr.ContactMap.atom_contacts	csb.bio.nmr.ContactMap-class.html#atom_contacts
csb.bio.nmr.ContactMap.chain	csb.bio.nmr.ContactMap-class.html#chain
csb.bio.nmr.ContactMap.DISTANCE_CUTOFF	csb.bio.nmr.ContactMap-class.html#DISTANCE_CUTOFF
csb.bio.nmr.ContactMap.connect	csb.bio.nmr.ContactMap-class.html#connect
csb.bio.nmr.ContactMap.__init__	csb.bio.nmr.ContactMap-class.html#__init__
csb.bio.nmr.ContactMap.__contains__	csb.bio.nmr.ContactMap-class.html#__contains__
csb.bio.nmr.ContactMap.build	csb.bio.nmr.ContactMap-class.html#build
csb.bio.nmr.ContactMap.draw	csb.bio.nmr.ContactMap-class.html#draw
csb.bio.nmr.ContactMap.residue_contacts	csb.bio.nmr.ContactMap-class.html#residue_contacts
csb.bio.nmr.ContactMap.atom_matrix	csb.bio.nmr.ContactMap-class.html#atom_matrix
csb.bio.nmr.ContactMap.atoms	csb.bio.nmr.ContactMap-class.html#atoms
csb.bio.nmr.ContactMap.__iter__	csb.bio.nmr.ContactMap-class.html#__iter__
csb.bio.nmr.ContactMap.connected	csb.bio.nmr.ContactMap-class.html#connected
csb.bio.nmr.ContactMap._connect	csb.bio.nmr.ContactMap-class.html#_connect
csb.bio.nmr.ContactMap.contacts	csb.bio.nmr.ContactMap-class.html#contacts
csb.bio.nmr.ContactMap.position	csb.bio.nmr.ContactMap-class.html#position
csb.bio.nmr.ContactMapComparisonInfo	csb.bio.nmr.ContactMapComparisonInfo-class.html
csb.bio.nmr.ContactMapComparisonInfo.__init__	csb.bio.nmr.ContactMapComparisonInfo-class.html#__init__
csb.bio.nmr.EntityNotSupportedError	csb.bio.nmr.EntityNotSupportedError-class.html
csb.bio.nmr.Filters	csb.bio.nmr.Filters-class.html
csb.bio.nmr.Filters.ALL	csb.bio.nmr.Filters-class.html#ALL
csb.bio.nmr.Filters.HYDROGENS	csb.bio.nmr.Filters-class.html#HYDROGENS
csb.bio.nmr.Filters.CARBONS	csb.bio.nmr.Filters-class.html#CARBONS
csb.bio.nmr.Filters.CALPHAS	csb.bio.nmr.Filters-class.html#CALPHAS
csb.bio.nmr.InvalidResidueError	csb.bio.nmr.InvalidResidueError-class.html
csb.bio.nmr.Label	csb.bio.nmr.Label-class.html
csb.bio.nmr.Label.from_atom	csb.bio.nmr.Label-class.html#from_atom
csb.bio.nmr.Label.__str__	csb.bio.nmr.Label-class.html#__str__
csb.bio.nmr.Label.rank	csb.bio.nmr.Label-class.html#rank
csb.bio.nmr.Label.parse	csb.bio.nmr.Label-class.html#parse
csb.bio.nmr.Label.__init__	csb.bio.nmr.Label-class.html#__init__
csb.bio.nmr.Label.residue	csb.bio.nmr.Label-class.html#residue
csb.bio.nmr.Label.get_atom	csb.bio.nmr.Label-class.html#get_atom
csb.bio.nmr.Label.build	csb.bio.nmr.Label-class.html#build
csb.bio.nmr.Label.atom_name	csb.bio.nmr.Label-class.html#atom_name
csb.bio.nmr.Label.from_string	csb.bio.nmr.Label-class.html#from_string
csb.bio.nmr.Label.match	csb.bio.nmr.Label-class.html#match
csb.bio.nmr.Label.from_shift	csb.bio.nmr.Label-class.html#from_shift
csb.bio.nmr.NOEPeak	csb.bio.nmr.NOEPeak-class.html
csb.bio.nmr.NOEPeak.connected_dimensions	csb.bio.nmr.NOEPeak-class.html#connected_dimensions
csb.bio.nmr.NOEPeak.__str__	csb.bio.nmr.NOEPeak-class.html#__str__
csb.bio.nmr.NOEPeak.intensity	csb.bio.nmr.NOEPeak-class.html#intensity
csb.bio.nmr.NOEPeak.__init__	csb.bio.nmr.NOEPeak-class.html#__init__
csb.bio.nmr.NOEPeak.has_element	csb.bio.nmr.NOEPeak-class.html#has_element
csb.bio.nmr.NOEPeak.__getitem__	csb.bio.nmr.NOEPeak-class.html#__getitem__
csb.bio.nmr.NOEPeak.get	csb.bio.nmr.NOEPeak-class.html#get
csb.bio.nmr.NOEPeak.has_connected_dimensions	csb.bio.nmr.NOEPeak-class.html#has_connected_dimensions
csb.bio.nmr.NOEPeak.__iter__	csb.bio.nmr.NOEPeak-class.html#__iter__
csb.bio.nmr.NOEPeak.element	csb.bio.nmr.NOEPeak-class.html#element
csb.bio.nmr.NOEPeak.num_dimensions	csb.bio.nmr.NOEPeak-class.html#num_dimensions
csb.bio.nmr.NOESpectrum	csb.bio.nmr.NOESpectrum-class.html
csb.bio.nmr.NOESpectrum.connected_dimensions	csb.bio.nmr.NOESpectrum-class.html#connected_dimensions
csb.bio.nmr.NOESpectrum.__str__	csb.bio.nmr.NOESpectrum-class.html#__str__
csb.bio.nmr.NOESpectrum.max_intensity	csb.bio.nmr.NOESpectrum-class.html#max_intensity
csb.bio.nmr.NOESpectrum.connect	csb.bio.nmr.NOESpectrum-class.html#connect
csb.bio.nmr.NOESpectrum.__init__	csb.bio.nmr.NOESpectrum-class.html#__init__
csb.bio.nmr.NOESpectrum.dimensions	csb.bio.nmr.NOESpectrum-class.html#dimensions
csb.bio.nmr.NOESpectrum.add	csb.bio.nmr.NOESpectrum-class.html#add
csb.bio.nmr.NOESpectrum.num_proton_dimensions	csb.bio.nmr.NOESpectrum-class.html#num_proton_dimensions
csb.bio.nmr.NOESpectrum.__len__	csb.bio.nmr.NOESpectrum-class.html#__len__
csb.bio.nmr.NOESpectrum.proton_dimensions	csb.bio.nmr.NOESpectrum-class.html#proton_dimensions
csb.bio.nmr.NOESpectrum.num_dimensions	csb.bio.nmr.NOESpectrum-class.html#num_dimensions
csb.bio.nmr.NOESpectrum.__getitem__	csb.bio.nmr.NOESpectrum-class.html#__getitem__
csb.bio.nmr.NOESpectrum.has_connected_dimensions	csb.bio.nmr.NOESpectrum-class.html#has_connected_dimensions
csb.bio.nmr.NOESpectrum.__iter__	csb.bio.nmr.NOESpectrum-class.html#__iter__
csb.bio.nmr.NOESpectrum.min_intensity	csb.bio.nmr.NOESpectrum-class.html#min_intensity
csb.bio.nmr.NOESpectrum.join	csb.bio.nmr.NOESpectrum-class.html#join
csb.bio.nmr.NOESpectrum.element	csb.bio.nmr.NOESpectrum-class.html#element
csb.bio.nmr.NOESpectrum._can_connect	csb.bio.nmr.NOESpectrum-class.html#_can_connect
csb.bio.nmr.NOESpectrum.has_element	csb.bio.nmr.NOESpectrum-class.html#has_element
csb.bio.nmr.RandomCoil	csb.bio.nmr.RandomCoil-class.html
csb.bio.nmr.RandomCoil.secondary_shift	csb.bio.nmr.RandomCoil-class.html#secondary_shift
csb.bio.nmr.RandomCoil._load	csb.bio.nmr.RandomCoil-class.html#_load
csb.bio.nmr.RandomCoil._instance	csb.bio.nmr.RandomCoil-class.html#_instance
csb.bio.nmr.RandomCoil._initialize	csb.bio.nmr.RandomCoil-class.html#_initialize
csb.bio.nmr.RandomCoil.get	csb.bio.nmr.RandomCoil-class.html#get
csb.bio.nmr.RandomCoil.simple_secondary_shift	csb.bio.nmr.RandomCoil-class.html#simple_secondary_shift
csb.bio.nmr.RandomCoil.RESOURCES	csb.bio.nmr.RandomCoil-class.html#RESOURCES
csb.bio.nmr.RandomCoil.__init__	csb.bio.nmr.RandomCoil-class.html#__init__
csb.bio.sequence.A3MAlignment	csb.bio.sequence.A3MAlignment-class.html
csb.bio.sequence.AbstractAlignment.__metaclass__	abc.ABCMeta-class.html
csb.bio.sequence.AbstractAlignment._abc_negative_cache	csb.bio.sequence.AbstractAlignment-class.html#_abc_negative_cache
csb.bio.sequence.AbstractAlignment._factory	csb.bio.sequence.AbstractAlignment-class.html#_factory
csb.bio.sequence.A3MAlignment.parse	csb.bio.sequence.A3MAlignment-class.html#parse
csb.bio.sequence.AbstractAlignment.subregion	csb.bio.sequence.AbstractAlignment-class.html#subregion
csb.bio.sequence.A3MAlignment.__init__	csb.bio.sequence.A3MAlignment-class.html#__init__
csb.bio.sequence.AbstractAlignment.size	csb.bio.sequence.AbstractAlignment-class.html#size
csb.bio.sequence.A3MAlignment.hmm_subregion	csb.bio.sequence.A3MAlignment-class.html#hmm_subregion
csb.bio.sequence.AbstractAlignment.rows	csb.bio.sequence.AbstractAlignment-class.html#rows
csb.bio.sequence.A3MAlignment._construct	csb.bio.sequence.A3MAlignment-class.html#_construct
csb.bio.sequence.AbstractAlignment._range	csb.bio.sequence.AbstractAlignment-class.html#_range
csb.bio.sequence.AbstractAlignment._extract	csb.bio.sequence.AbstractAlignment-class.html#_extract
csb.bio.sequence.A3MAlignment.__abstractmethods__	csb.bio.sequence.A3MAlignment-class.html#__abstractmethods__
csb.bio.sequence.AbstractAlignment.add	csb.bio.sequence.AbstractAlignment-class.html#add
csb.bio.sequence.A3MAlignment.master	csb.bio.sequence.A3MAlignment-class.html#master
csb.bio.sequence.AbstractAlignment.columns	csb.bio.sequence.AbstractAlignment-class.html#columns
csb.bio.sequence.AbstractAlignment._abc_cache	csb.bio.sequence.AbstractAlignment-class.html#_abc_cache
csb.bio.sequence.AbstractAlignment.gap_at	csb.bio.sequence.AbstractAlignment-class.html#gap_at
csb.bio.sequence.AbstractAlignment._get_column	csb.bio.sequence.AbstractAlignment-class.html#_get_column
csb.bio.sequence.AbstractAlignment.__getitem__	csb.bio.sequence.AbstractAlignment-class.html#__getitem__
csb.bio.sequence.A3MAlignment.format	csb.bio.sequence.A3MAlignment-class.html#format
csb.bio.sequence.A3MAlignment.matches	csb.bio.sequence.A3MAlignment-class.html#matches
csb.bio.sequence.A3MAlignment.insertion_at	csb.bio.sequence.A3MAlignment-class.html#insertion_at
csb.bio.sequence.AbstractAlignment.__iter__	csb.bio.sequence.AbstractAlignment-class.html#__iter__
csb.bio.sequence.A3MAlignment._initialize	csb.bio.sequence.A3MAlignment-class.html#_initialize
csb.bio.sequence.AbstractAlignment.length	csb.bio.sequence.AbstractAlignment-class.html#length
csb.bio.sequence.AbstractAlignment._abc_negative_cache_version	csb.bio.sequence.AbstractAlignment-class.html#_abc_negative_cache_version
csb.bio.sequence.AbstractAlignment._abc_registry	csb.bio.sequence.AbstractAlignment-class.html#_abc_registry
csb.bio.sequence.AbstractAlignment	csb.bio.sequence.AbstractAlignment-class.html
csb.bio.sequence.AbstractAlignment.__metaclass__	abc.ABCMeta-class.html
csb.bio.sequence.AbstractAlignment._abc_negative_cache	csb.bio.sequence.AbstractAlignment-class.html#_abc_negative_cache
csb.bio.sequence.AbstractAlignment._factory	csb.bio.sequence.AbstractAlignment-class.html#_factory
csb.bio.sequence.AbstractAlignment.subregion	csb.bio.sequence.AbstractAlignment-class.html#subregion
csb.bio.sequence.AbstractAlignment.__init__	csb.bio.sequence.AbstractAlignment-class.html#__init__
csb.bio.sequence.AbstractAlignment.size	csb.bio.sequence.AbstractAlignment-class.html#size
csb.bio.sequence.AbstractAlignment._abc_cache	csb.bio.sequence.AbstractAlignment-class.html#_abc_cache
csb.bio.sequence.AbstractAlignment.rows	csb.bio.sequence.AbstractAlignment-class.html#rows
csb.bio.sequence.AbstractAlignment._construct	csb.bio.sequence.AbstractAlignment-class.html#_construct
csb.bio.sequence.AbstractAlignment._range	csb.bio.sequence.AbstractAlignment-class.html#_range
csb.bio.sequence.AbstractAlignment._extract	csb.bio.sequence.AbstractAlignment-class.html#_extract
csb.bio.sequence.AbstractAlignment.__abstractmethods__	csb.bio.sequence.AbstractAlignment-class.html#__abstractmethods__
csb.bio.sequence.AbstractAlignment.add	csb.bio.sequence.AbstractAlignment-class.html#add
csb.bio.sequence.AbstractAlignment.columns	csb.bio.sequence.AbstractAlignment-class.html#columns
csb.bio.sequence.AbstractAlignment.gap_at	csb.bio.sequence.AbstractAlignment-class.html#gap_at
csb.bio.sequence.AbstractAlignment._get_column	csb.bio.sequence.AbstractAlignment-class.html#_get_column
csb.bio.sequence.AbstractAlignment.__getitem__	csb.bio.sequence.AbstractAlignment-class.html#__getitem__
csb.bio.sequence.AbstractAlignment.format	csb.bio.sequence.AbstractAlignment-class.html#format
csb.bio.sequence.AbstractAlignment.__iter__	csb.bio.sequence.AbstractAlignment-class.html#__iter__
csb.bio.sequence.AbstractAlignment._initialize	csb.bio.sequence.AbstractAlignment-class.html#_initialize
csb.bio.sequence.AbstractAlignment.length	csb.bio.sequence.AbstractAlignment-class.html#length
csb.bio.sequence.AbstractAlignment._abc_negative_cache_version	csb.bio.sequence.AbstractAlignment-class.html#_abc_negative_cache_version
csb.bio.sequence.AbstractAlignment._abc_registry	csb.bio.sequence.AbstractAlignment-class.html#_abc_registry
csb.bio.sequence.AbstractSequence	csb.bio.sequence.AbstractSequence-class.html
csb.bio.sequence.AbstractSequence.__metaclass__	abc.ABCMeta-class.html
csb.bio.sequence.AbstractSequence.dump	csb.bio.sequence.AbstractSequence-class.html#dump
csb.bio.sequence.AbstractSequence.sequence	csb.bio.sequence.AbstractSequence-class.html#sequence
csb.bio.sequence.AbstractSequence._abc_negative_cache	csb.bio.sequence.AbstractSequence-class.html#_abc_negative_cache
csb.bio.sequence.AbstractSequence.__str__	csb.bio.sequence.AbstractSequence-class.html#__str__
csb.bio.sequence.AbstractSequence._factory	csb.bio.sequence.AbstractSequence-class.html#_factory
csb.bio.sequence.AbstractSequence._add	csb.bio.sequence.AbstractSequence-class.html#_add
csb.bio.sequence.AbstractSequence.header	csb.bio.sequence.AbstractSequence-class.html#header
csb.bio.sequence.AbstractSequence.subregion	csb.bio.sequence.AbstractSequence-class.html#subregion
csb.bio.sequence.AbstractSequence.strip	csb.bio.sequence.AbstractSequence-class.html#strip
csb.bio.sequence.AbstractSequence.extract	csb.bio.sequence.AbstractSequence-class.html#extract
csb.bio.sequence.AbstractSequence.id	csb.bio.sequence.AbstractSequence-class.html#id
csb.bio.sequence.AbstractSequence.__init__	csb.bio.sequence.AbstractSequence-class.html#__init__
csb.bio.sequence.AbstractSequence._abc_cache	csb.bio.sequence.AbstractSequence-class.html#_abc_cache
csb.bio.sequence.AbstractSequence.alphabet	csb.bio.sequence.AbstractSequence-class.html#alphabet
csb.bio.sequence.AbstractSequence.__abstractmethods__	csb.bio.sequence.AbstractSequence-class.html#__abstractmethods__
csb.bio.sequence.AbstractSequence.type	csb.bio.sequence.AbstractSequence-class.html#type
csb.bio.sequence.AbstractSequence.__len__	csb.bio.sequence.AbstractSequence-class.html#__len__
csb.bio.sequence.AbstractSequence.__getitem__	csb.bio.sequence.AbstractSequence-class.html#__getitem__
csb.bio.sequence.AbstractSequence.residues	csb.bio.sequence.AbstractSequence-class.html#residues
csb.bio.sequence.AbstractSequence._get	csb.bio.sequence.AbstractSequence-class.html#_get
csb.bio.sequence.AbstractSequence.DELIMITER	csb.bio.sequence.AbstractSequence-class.html#DELIMITER
csb.bio.sequence.AbstractSequence.__iter__	csb.bio.sequence.AbstractSequence-class.html#__iter__
csb.bio.sequence.AbstractSequence.length	csb.bio.sequence.AbstractSequence-class.html#length
csb.bio.sequence.AbstractSequence._abc_negative_cache_version	csb.bio.sequence.AbstractSequence-class.html#_abc_negative_cache_version
csb.bio.sequence.AbstractSequence.__repr__	csb.bio.sequence.AbstractSequence-class.html#__repr__
csb.bio.sequence.AbstractSequence._abc_registry	csb.bio.sequence.AbstractSequence-class.html#_abc_registry
csb.bio.sequence.AlignedSequenceAdapter	csb.bio.sequence.AlignedSequenceAdapter-class.html
csb.bio.sequence.SequenceAdapter.sequence	csb.bio.sequence.SequenceAdapter-class.html#sequence
csb.bio.sequence.SequenceAdapter.__str__	csb.bio.sequence.SequenceAdapter-class.html#__str__
csb.bio.sequence.AlignedSequenceAdapter._get_ungapped	csb.bio.sequence.AlignedSequenceAdapter-class.html#_get_ungapped
csb.bio.sequence.SequenceAdapter._factory	csb.bio.sequence.SequenceAdapter-class.html#_factory
csb.bio.sequence.SequenceAdapter._add	csb.bio.sequence.SequenceAdapter-class.html#_add
csb.bio.sequence.SequenceAdapter.header	csb.bio.sequence.SequenceAdapter-class.html#header
csb.bio.sequence.SequenceAdapter.subregion	csb.bio.sequence.SequenceAdapter-class.html#subregion
csb.bio.sequence.SequenceAdapter.strip	csb.bio.sequence.SequenceAdapter-class.html#strip
csb.bio.sequence.SequenceAdapter.extract	csb.bio.sequence.SequenceAdapter-class.html#extract
csb.bio.sequence.SequenceAdapter.id	csb.bio.sequence.SequenceAdapter-class.html#id
csb.bio.sequence.AlignedSequenceAdapter.__init__	csb.bio.sequence.AlignedSequenceAdapter-class.html#__init__
csb.bio.sequence.SequenceAdapter.alphabet	csb.bio.sequence.SequenceAdapter-class.html#alphabet
csb.bio.sequence.AlignedSequenceAdapter.map_column	csb.bio.sequence.AlignedSequenceAdapter-class.html#map_column
csb.bio.sequence.AlignedSequenceAdapter.map_residue	csb.bio.sequence.AlignedSequenceAdapter-class.html#map_residue
csb.bio.sequence.SequenceAdapter.type	csb.bio.sequence.SequenceAdapter-class.html#type
csb.bio.sequence.AlignedSequenceAdapter.columns	csb.bio.sequence.AlignedSequenceAdapter-class.html#columns
csb.bio.sequence.AlignedSequenceAdapter._get_column	csb.bio.sequence.AlignedSequenceAdapter-class.html#_get_column
csb.bio.sequence.AlignedSequenceAdapter.__getitem__	csb.bio.sequence.AlignedSequenceAdapter-class.html#__getitem__
csb.bio.sequence.AlignedSequenceAdapter.residues	csb.bio.sequence.AlignedSequenceAdapter-class.html#residues
csb.bio.sequence.SequenceAdapter._get	csb.bio.sequence.SequenceAdapter-class.html#_get
csb.bio.sequence.AlignedSequenceAdapter.__iter__	csb.bio.sequence.AlignedSequenceAdapter-class.html#__iter__
csb.bio.sequence.SequenceAdapter.length	csb.bio.sequence.SequenceAdapter-class.html#length
csb.bio.sequence.SequenceAdapter.__repr__	csb.bio.sequence.SequenceAdapter-class.html#__repr__
csb.bio.sequence.AlignmentFormats	csb.bio.sequence.AlignmentFormats-class.html
csb.core.enum.__init__	csb.core.enum-class.html#__init__
csb.bio.sequence.AlignmentFormats._namesci	csb.bio.sequence.AlignmentFormats-class.html#_namesci
csb.bio.sequence.AlignmentFormats._valuesci	csb.bio.sequence.AlignmentFormats-class.html#_valuesci
csb.bio.sequence.AlignmentFormats.FASTA	csb.bio.sequence.AlignmentFormats-class.html#FASTA
csb.bio.sequence.AlignmentFormats._names	csb.bio.sequence.AlignmentFormats-class.html#_names
csb.bio.sequence.AlignmentFormats.PIR	csb.bio.sequence.AlignmentFormats-class.html#PIR
csb.bio.sequence.AlignmentFormats.A3M	csb.bio.sequence.AlignmentFormats-class.html#A3M
csb.bio.sequence.AlignmentFormats._name	csb.bio.sequence.AlignmentFormats-class.html#_name
csb.bio.sequence.AlignmentFormats._values	csb.bio.sequence.AlignmentFormats-class.html#_values
csb.bio.sequence.AlignmentRowsTable	csb.bio.sequence.AlignmentRowsTable-class.html
csb.core.BaseDictionaryContainer._exception	csb.core.BaseDictionaryContainer-class.html#_exception
csb.bio.sequence.AlignmentRowsTable.__init__	csb.bio.sequence.AlignmentRowsTable-class.html#__init__
csb.core.BaseDictionaryContainer.__contains__	csb.core.BaseDictionaryContainer-class.html#__contains__
csb.core.BaseDictionaryContainer._getinternal	csb.core.BaseDictionaryContainer-class.html#_getinternal
csb.bio.sequence.AlignmentRowsTable._append	csb.bio.sequence.AlignmentRowsTable-class.html#_append
csb.core.BaseDictionaryContainer._set_items	csb.core.BaseDictionaryContainer-class.html#_set_items
csb.core.BaseDictionaryContainer._update_items	csb.core.BaseDictionaryContainer-class.html#_update_items
csb.core.BaseDictionaryContainer.__len__	csb.core.BaseDictionaryContainer-class.html#__len__
csb.bio.sequence.AlignmentRowsTable.__getitem__	csb.bio.sequence.AlignmentRowsTable-class.html#__getitem__
csb.core.BaseDictionaryContainer.keys	csb.core.BaseDictionaryContainer-class.html#keys
csb.bio.sequence.AlignmentRowsTable.__iter__	csb.bio.sequence.AlignmentRowsTable-class.html#__iter__
csb.core.BaseDictionaryContainer.__bool__	csb.core.BaseDictionaryContainer-class.html#__bool__
csb.core.BaseDictionaryContainer._append_item	csb.core.BaseDictionaryContainer-class.html#_append_item
csb.core.BaseDictionaryContainer.__nonzero__	csb.core.BaseDictionaryContainer-class.html#__nonzero__
csb.core.BaseDictionaryContainer.length	csb.core.BaseDictionaryContainer-class.html#length
csb.core.BaseDictionaryContainer._remove_item	csb.core.BaseDictionaryContainer-class.html#_remove_item
csb.core.BaseDictionaryContainer.__repr__	csb.core.BaseDictionaryContainer-class.html#__repr__
csb.bio.sequence.AlignmentTypes	csb.bio.sequence.AlignmentTypes-class.html
csb.bio.sequence.AlignmentTypes._names	csb.bio.sequence.AlignmentTypes-class.html#_names
csb.bio.sequence.AlignmentTypes.Global	csb.bio.sequence.AlignmentTypes-class.html#Global
csb.bio.sequence.AlignmentTypes._namesci	csb.bio.sequence.AlignmentTypes-class.html#_namesci
csb.bio.sequence.AlignmentTypes._name	csb.bio.sequence.AlignmentTypes-class.html#_name
csb.bio.sequence.AlignmentTypes._valuesci	csb.bio.sequence.AlignmentTypes-class.html#_valuesci
csb.bio.sequence.AlignmentTypes._values	csb.bio.sequence.AlignmentTypes-class.html#_values
csb.bio.sequence.AlignmentTypes.Local	csb.bio.sequence.AlignmentTypes-class.html#Local
csb.core.enum.__init__	csb.core.enum-class.html#__init__
csb.bio.sequence.ChainSequence	csb.bio.sequence.ChainSequence-class.html
csb.bio.sequence.AbstractSequence.__metaclass__	abc.ABCMeta-class.html
csb.bio.sequence.AbstractSequence.dump	csb.bio.sequence.AbstractSequence-class.html#dump
csb.bio.sequence.AbstractSequence.sequence	csb.bio.sequence.AbstractSequence-class.html#sequence
csb.bio.sequence.AbstractSequence._abc_negative_cache	csb.bio.sequence.AbstractSequence-class.html#_abc_negative_cache
csb.bio.sequence.AbstractSequence.__str__	csb.bio.sequence.AbstractSequence-class.html#__str__
csb.bio.sequence.AbstractSequence._factory	csb.bio.sequence.AbstractSequence-class.html#_factory
csb.bio.sequence.ChainSequence._add	csb.bio.sequence.ChainSequence-class.html#_add
csb.bio.sequence.AbstractSequence.header	csb.bio.sequence.AbstractSequence-class.html#header
csb.bio.sequence.AbstractSequence.subregion	csb.bio.sequence.AbstractSequence-class.html#subregion
csb.bio.sequence.AbstractSequence.strip	csb.bio.sequence.AbstractSequence-class.html#strip
csb.bio.sequence.AbstractSequence.extract	csb.bio.sequence.AbstractSequence-class.html#extract
csb.bio.sequence.AbstractSequence.id	csb.bio.sequence.AbstractSequence-class.html#id
csb.bio.sequence.AbstractSequence.__init__	csb.bio.sequence.AbstractSequence-class.html#__init__
csb.bio.sequence.AbstractSequence._abc_cache	csb.bio.sequence.AbstractSequence-class.html#_abc_cache
csb.bio.sequence.AbstractSequence.alphabet	csb.bio.sequence.AbstractSequence-class.html#alphabet
csb.bio.sequence.ChainSequence.create	csb.bio.sequence.ChainSequence-class.html#create
csb.bio.sequence.ChainSequence.__abstractmethods__	csb.bio.sequence.ChainSequence-class.html#__abstractmethods__
csb.bio.sequence.AbstractSequence.type	csb.bio.sequence.AbstractSequence-class.html#type
csb.bio.sequence.AbstractSequence.__len__	csb.bio.sequence.AbstractSequence-class.html#__len__
csb.bio.sequence.AbstractSequence.__getitem__	csb.bio.sequence.AbstractSequence-class.html#__getitem__
csb.bio.sequence.AbstractSequence.residues	csb.bio.sequence.AbstractSequence-class.html#residues
csb.bio.sequence.ChainSequence._get	csb.bio.sequence.ChainSequence-class.html#_get
csb.bio.sequence.AbstractSequence.DELIMITER	csb.bio.sequence.AbstractSequence-class.html#DELIMITER
csb.bio.sequence.AbstractSequence.__iter__	csb.bio.sequence.AbstractSequence-class.html#__iter__
csb.bio.sequence.AbstractSequence.length	csb.bio.sequence.AbstractSequence-class.html#length
csb.bio.sequence.AbstractSequence._abc_negative_cache_version	csb.bio.sequence.AbstractSequence-class.html#_abc_negative_cache_version
csb.bio.sequence.AbstractSequence.__repr__	csb.bio.sequence.AbstractSequence-class.html#__repr__
csb.bio.sequence.AbstractSequence._abc_registry	csb.bio.sequence.AbstractSequence-class.html#_abc_registry
csb.bio.sequence.ColumnIndexer	csb.bio.sequence.ColumnIndexer-class.html
csb.bio.sequence.ColumnIndexer.__getitem__	csb.bio.sequence.ColumnIndexer-class.html#__getitem__
csb.bio.sequence.SequenceIndexer.__iter__	csb.bio.sequence.SequenceIndexer-class.html#__iter__
csb.bio.sequence.SequenceIndexer.__init__	csb.bio.sequence.SequenceIndexer-class.html#__init__
csb.bio.sequence.ColumnInfo	csb.bio.sequence.ColumnInfo-class.html
csb.bio.sequence.ColumnInfo.__repr__	csb.bio.sequence.ColumnInfo-class.html#__repr__
csb.bio.sequence.ColumnInfo.__init__	csb.bio.sequence.ColumnInfo-class.html#__init__
csb.bio.sequence.ColumnPositionError	csb.bio.sequence.ColumnPositionError-class.html
csb.bio.sequence.PositionError.__str__	csb.bio.sequence.PositionError-class.html#__str__
csb.bio.sequence.PositionError.__init__	csb.bio.sequence.PositionError-class.html#__init__
csb.bio.sequence.DuplicateSequenceError	csb.bio.sequence.DuplicateSequenceError-class.html
csb.bio.sequence.NucleicAlphabet	csb.bio.sequence.NucleicAlphabet-class.html
csb.bio.sequence.NucleicAlphabet.Guanine	csb.bio.sequence.NucleicAlphabet-class.html#Guanine
csb.bio.sequence.NucleicAlphabet.Masked	csb.bio.sequence.NucleicAlphabet-class.html#Masked
csb.core.enum.__init__	csb.core.enum-class.html#__init__
csb.bio.sequence.NucleicAlphabet.NotT	csb.bio.sequence.NucleicAlphabet-class.html#NotT
csb.bio.sequence.NucleicAlphabet.Weak	csb.bio.sequence.NucleicAlphabet-class.html#Weak
csb.bio.sequence.NucleicAlphabet._namesci	csb.bio.sequence.NucleicAlphabet-class.html#_namesci
csb.bio.sequence.NucleicAlphabet.GAP	csb.bio.sequence.NucleicAlphabet-class.html#GAP
csb.bio.sequence.NucleicAlphabet._valuesci	csb.bio.sequence.NucleicAlphabet-class.html#_valuesci
csb.bio.sequence.NucleicAlphabet.NotG	csb.bio.sequence.NucleicAlphabet-class.html#NotG
csb.bio.sequence.NucleicAlphabet.NotA	csb.bio.sequence.NucleicAlphabet-class.html#NotA
csb.bio.sequence.NucleicAlphabet.INSERTION	csb.bio.sequence.NucleicAlphabet-class.html#INSERTION
csb.bio.sequence.NucleicAlphabet.Strong	csb.bio.sequence.NucleicAlphabet-class.html#Strong
csb.bio.sequence.NucleicAlphabet.Uracil	csb.bio.sequence.NucleicAlphabet-class.html#Uracil
csb.bio.sequence.NucleicAlphabet.NotC	csb.bio.sequence.NucleicAlphabet-class.html#NotC
csb.bio.sequence.NucleicAlphabet.Adenine	csb.bio.sequence.NucleicAlphabet-class.html#Adenine
csb.bio.sequence.NucleicAlphabet._names	csb.bio.sequence.NucleicAlphabet-class.html#_names
csb.bio.sequence.NucleicAlphabet.Ketone	csb.bio.sequence.NucleicAlphabet-class.html#Ketone
csb.bio.sequence.NucleicAlphabet.Cytosine	csb.bio.sequence.NucleicAlphabet-class.html#Cytosine
csb.bio.sequence.NucleicAlphabet.Thymine	csb.bio.sequence.NucleicAlphabet-class.html#Thymine
csb.bio.sequence.NucleicAlphabet._name	csb.bio.sequence.NucleicAlphabet-class.html#_name
csb.bio.sequence.NucleicAlphabet.Pyrimidine	csb.bio.sequence.NucleicAlphabet-class.html#Pyrimidine
csb.bio.sequence.NucleicAlphabet._values	csb.bio.sequence.NucleicAlphabet-class.html#_values
csb.bio.sequence.NucleicAlphabet.Purine	csb.bio.sequence.NucleicAlphabet-class.html#Purine
csb.bio.sequence.NucleicAlphabet.Any	csb.bio.sequence.NucleicAlphabet-class.html#Any
csb.bio.sequence.NucleicAlphabet.Amino	csb.bio.sequence.NucleicAlphabet-class.html#Amino
csb.bio.sequence.PositionError	csb.bio.sequence.PositionError-class.html
csb.bio.sequence.PositionError.__str__	csb.bio.sequence.PositionError-class.html#__str__
csb.bio.sequence.PositionError.__init__	csb.bio.sequence.PositionError-class.html#__init__
csb.bio.sequence.ProteinAlphabet	csb.bio.sequence.ProteinAlphabet-class.html
csb.bio.sequence.ProteinAlphabet.ILE	csb.bio.sequence.ProteinAlphabet-class.html#ILE
csb.bio.sequence.ProteinAlphabet.GLN	csb.bio.sequence.ProteinAlphabet-class.html#GLN
csb.bio.sequence.ProteinAlphabet.STOP	csb.bio.sequence.ProteinAlphabet-class.html#STOP
csb.bio.sequence.ProteinAlphabet.GLX	csb.bio.sequence.ProteinAlphabet-class.html#GLX
csb.bio.sequence.ProteinAlphabet.GLY	csb.bio.sequence.ProteinAlphabet-class.html#GLY
csb.bio.sequence.ProteinAlphabet.ALA	csb.bio.sequence.ProteinAlphabet-class.html#ALA
csb.bio.sequence.ProteinAlphabet.GLU	csb.bio.sequence.ProteinAlphabet-class.html#GLU
csb.core.enum.__init__	csb.core.enum-class.html#__init__
csb.bio.sequence.ProteinAlphabet.CYS	csb.bio.sequence.ProteinAlphabet-class.html#CYS
csb.bio.sequence.ProteinAlphabet.ASP	csb.bio.sequence.ProteinAlphabet-class.html#ASP
csb.bio.sequence.ProteinAlphabet.SER	csb.bio.sequence.ProteinAlphabet-class.html#SER
csb.bio.sequence.ProteinAlphabet.LYS	csb.bio.sequence.ProteinAlphabet-class.html#LYS
csb.bio.sequence.ProteinAlphabet.PRO	csb.bio.sequence.ProteinAlphabet-class.html#PRO
csb.bio.sequence.ProteinAlphabet.ASX	csb.bio.sequence.ProteinAlphabet-class.html#ASX
csb.bio.sequence.ProteinAlphabet._namesci	csb.bio.sequence.ProteinAlphabet-class.html#_namesci
csb.bio.sequence.ProteinAlphabet.GAP	csb.bio.sequence.ProteinAlphabet-class.html#GAP
csb.bio.sequence.ProteinAlphabet._valuesci	csb.bio.sequence.ProteinAlphabet-class.html#_valuesci
csb.bio.sequence.ProteinAlphabet.SEC	csb.bio.sequence.ProteinAlphabet-class.html#SEC
csb.bio.sequence.ProteinAlphabet.INSERTION	csb.bio.sequence.ProteinAlphabet-class.html#INSERTION
csb.bio.sequence.ProteinAlphabet.ASN	csb.bio.sequence.ProteinAlphabet-class.html#ASN
csb.bio.sequence.ProteinAlphabet.VAL	csb.bio.sequence.ProteinAlphabet-class.html#VAL
csb.bio.sequence.ProteinAlphabet._names	csb.bio.sequence.ProteinAlphabet-class.html#_names
csb.bio.sequence.ProteinAlphabet.THR	csb.bio.sequence.ProteinAlphabet-class.html#THR
csb.bio.sequence.ProteinAlphabet.HIS	csb.bio.sequence.ProteinAlphabet-class.html#HIS
csb.bio.sequence.ProteinAlphabet.TRP	csb.bio.sequence.ProteinAlphabet-class.html#TRP
csb.bio.sequence.ProteinAlphabet.UNK	csb.bio.sequence.ProteinAlphabet-class.html#UNK
csb.bio.sequence.ProteinAlphabet.PHE	csb.bio.sequence.ProteinAlphabet-class.html#PHE
csb.bio.sequence.ProteinAlphabet._name	csb.bio.sequence.ProteinAlphabet-class.html#_name
csb.bio.sequence.ProteinAlphabet.MET	csb.bio.sequence.ProteinAlphabet-class.html#MET
csb.bio.sequence.ProteinAlphabet.PYL	csb.bio.sequence.ProteinAlphabet-class.html#PYL
csb.bio.sequence.ProteinAlphabet.LEU	csb.bio.sequence.ProteinAlphabet-class.html#LEU
csb.bio.sequence.ProteinAlphabet._values	csb.bio.sequence.ProteinAlphabet-class.html#_values
csb.bio.sequence.ProteinAlphabet.ARG	csb.bio.sequence.ProteinAlphabet-class.html#ARG
csb.bio.sequence.ProteinAlphabet.TYR	csb.bio.sequence.ProteinAlphabet-class.html#TYR
csb.bio.sequence.ResidueInfo	csb.bio.sequence.ResidueInfo-class.html
csb.bio.sequence.ResidueInfo.rank	csb.bio.sequence.ResidueInfo-class.html#rank
csb.bio.sequence.ResidueInfo.__repr__	csb.bio.sequence.ResidueInfo-class.html#__repr__
csb.bio.sequence.ResidueInfo.type	csb.bio.sequence.ResidueInfo-class.html#type
csb.bio.sequence.ResidueInfo.__init__	csb.bio.sequence.ResidueInfo-class.html#__init__
csb.bio.sequence.RichSequence	csb.bio.sequence.RichSequence-class.html
csb.bio.sequence.AbstractSequence.__metaclass__	abc.ABCMeta-class.html
csb.bio.sequence.AbstractSequence.dump	csb.bio.sequence.AbstractSequence-class.html#dump
csb.bio.sequence.AbstractSequence.sequence	csb.bio.sequence.AbstractSequence-class.html#sequence
csb.bio.sequence.AbstractSequence._abc_negative_cache	csb.bio.sequence.AbstractSequence-class.html#_abc_negative_cache
csb.bio.sequence.AbstractSequence.__str__	csb.bio.sequence.AbstractSequence-class.html#__str__
csb.bio.sequence.AbstractSequence._factory	csb.bio.sequence.AbstractSequence-class.html#_factory
csb.bio.sequence.RichSequence._add	csb.bio.sequence.RichSequence-class.html#_add
csb.bio.sequence.AbstractSequence.header	csb.bio.sequence.AbstractSequence-class.html#header
csb.bio.sequence.AbstractSequence.subregion	csb.bio.sequence.AbstractSequence-class.html#subregion
csb.bio.sequence.AbstractSequence.strip	csb.bio.sequence.AbstractSequence-class.html#strip
csb.bio.sequence.AbstractSequence.extract	csb.bio.sequence.AbstractSequence-class.html#extract
csb.bio.sequence.AbstractSequence.id	csb.bio.sequence.AbstractSequence-class.html#id
csb.bio.sequence.AbstractSequence.__init__	csb.bio.sequence.AbstractSequence-class.html#__init__
csb.bio.sequence.AbstractSequence._abc_cache	csb.bio.sequence.AbstractSequence-class.html#_abc_cache
csb.bio.sequence.AbstractSequence.alphabet	csb.bio.sequence.AbstractSequence-class.html#alphabet
csb.bio.sequence.RichSequence.create	csb.bio.sequence.RichSequence-class.html#create
csb.bio.sequence.RichSequence.__abstractmethods__	csb.bio.sequence.RichSequence-class.html#__abstractmethods__
csb.bio.sequence.AbstractSequence.type	csb.bio.sequence.AbstractSequence-class.html#type
csb.bio.sequence.AbstractSequence.__len__	csb.bio.sequence.AbstractSequence-class.html#__len__
csb.bio.sequence.AbstractSequence.__getitem__	csb.bio.sequence.AbstractSequence-class.html#__getitem__
csb.bio.sequence.AbstractSequence.residues	csb.bio.sequence.AbstractSequence-class.html#residues
csb.bio.sequence.RichSequence._get	csb.bio.sequence.RichSequence-class.html#_get
csb.bio.sequence.AbstractSequence.DELIMITER	csb.bio.sequence.AbstractSequence-class.html#DELIMITER
csb.bio.sequence.AbstractSequence.__iter__	csb.bio.sequence.AbstractSequence-class.html#__iter__
csb.bio.sequence.AbstractSequence.length	csb.bio.sequence.AbstractSequence-class.html#length
csb.bio.sequence.AbstractSequence._abc_negative_cache_version	csb.bio.sequence.AbstractSequence-class.html#_abc_negative_cache_version
csb.bio.sequence.AbstractSequence.__repr__	csb.bio.sequence.AbstractSequence-class.html#__repr__
csb.bio.sequence.AbstractSequence._abc_registry	csb.bio.sequence.AbstractSequence-class.html#_abc_registry
csb.bio.sequence.Sequence	csb.bio.sequence.Sequence-class.html
csb.bio.sequence.AbstractSequence.__metaclass__	abc.ABCMeta-class.html
csb.bio.sequence.AbstractSequence.dump	csb.bio.sequence.AbstractSequence-class.html#dump
csb.bio.sequence.Sequence.sequence	csb.bio.sequence.Sequence-class.html#sequence
csb.bio.sequence.AbstractSequence._abc_negative_cache	csb.bio.sequence.AbstractSequence-class.html#_abc_negative_cache
csb.bio.sequence.AbstractSequence.__str__	csb.bio.sequence.AbstractSequence-class.html#__str__
csb.bio.sequence.AbstractSequence._factory	csb.bio.sequence.AbstractSequence-class.html#_factory
csb.bio.sequence.Sequence._add	csb.bio.sequence.Sequence-class.html#_add
csb.bio.sequence.AbstractSequence.header	csb.bio.sequence.AbstractSequence-class.html#header
csb.bio.sequence.Sequence.subregion	csb.bio.sequence.Sequence-class.html#subregion
csb.bio.sequence.Sequence.strip	csb.bio.sequence.Sequence-class.html#strip
csb.bio.sequence.Sequence.extract	csb.bio.sequence.Sequence-class.html#extract
csb.bio.sequence.AbstractSequence.id	csb.bio.sequence.AbstractSequence-class.html#id
csb.bio.sequence.Sequence.__init__	csb.bio.sequence.Sequence-class.html#__init__
csb.bio.sequence.AbstractSequence._abc_cache	csb.bio.sequence.AbstractSequence-class.html#_abc_cache
csb.bio.sequence.AbstractSequence.alphabet	csb.bio.sequence.AbstractSequence-class.html#alphabet
csb.bio.sequence.Sequence.__abstractmethods__	csb.bio.sequence.Sequence-class.html#__abstractmethods__
csb.bio.sequence.Sequence._append	csb.bio.sequence.Sequence-class.html#_append
csb.bio.sequence.AbstractSequence.type	csb.bio.sequence.AbstractSequence-class.html#type
csb.bio.sequence.AbstractSequence.__len__	csb.bio.sequence.AbstractSequence-class.html#__len__
csb.bio.sequence.AbstractSequence.__getitem__	csb.bio.sequence.AbstractSequence-class.html#__getitem__
csb.bio.sequence.AbstractSequence.residues	csb.bio.sequence.AbstractSequence-class.html#residues
csb.bio.sequence.Sequence._get	csb.bio.sequence.Sequence-class.html#_get
csb.bio.sequence.AbstractSequence.DELIMITER	csb.bio.sequence.AbstractSequence-class.html#DELIMITER
csb.bio.sequence.AbstractSequence.__iter__	csb.bio.sequence.AbstractSequence-class.html#__iter__
csb.bio.sequence.AbstractSequence.length	csb.bio.sequence.AbstractSequence-class.html#length
csb.bio.sequence.AbstractSequence._abc_negative_cache_version	csb.bio.sequence.AbstractSequence-class.html#_abc_negative_cache_version
csb.bio.sequence.AbstractSequence.__repr__	csb.bio.sequence.AbstractSequence-class.html#__repr__
csb.bio.sequence.AbstractSequence._abc_registry	csb.bio.sequence.AbstractSequence-class.html#_abc_registry
csb.bio.sequence.SequenceAdapter	csb.bio.sequence.SequenceAdapter-class.html
csb.bio.sequence.SequenceAdapter.sequence	csb.bio.sequence.SequenceAdapter-class.html#sequence
csb.bio.sequence.SequenceAdapter.__str__	csb.bio.sequence.SequenceAdapter-class.html#__str__
csb.bio.sequence.SequenceAdapter._factory	csb.bio.sequence.SequenceAdapter-class.html#_factory
csb.bio.sequence.SequenceAdapter._add	csb.bio.sequence.SequenceAdapter-class.html#_add
csb.bio.sequence.SequenceAdapter.header	csb.bio.sequence.SequenceAdapter-class.html#header
csb.bio.sequence.SequenceAdapter.subregion	csb.bio.sequence.SequenceAdapter-class.html#subregion
csb.bio.sequence.SequenceAdapter.strip	csb.bio.sequence.SequenceAdapter-class.html#strip
csb.bio.sequence.SequenceAdapter.extract	csb.bio.sequence.SequenceAdapter-class.html#extract
csb.bio.sequence.SequenceAdapter.id	csb.bio.sequence.SequenceAdapter-class.html#id
csb.bio.sequence.SequenceAdapter.__init__	csb.bio.sequence.SequenceAdapter-class.html#__init__
csb.bio.sequence.SequenceAdapter.alphabet	csb.bio.sequence.SequenceAdapter-class.html#alphabet
csb.bio.sequence.SequenceAdapter.type	csb.bio.sequence.SequenceAdapter-class.html#type
csb.bio.sequence.SequenceAdapter.__getitem__	csb.bio.sequence.SequenceAdapter-class.html#__getitem__
csb.bio.sequence.SequenceAdapter._get	csb.bio.sequence.SequenceAdapter-class.html#_get
csb.bio.sequence.SequenceAdapter.__iter__	csb.bio.sequence.SequenceAdapter-class.html#__iter__
csb.bio.sequence.SequenceAdapter.length	csb.bio.sequence.SequenceAdapter-class.html#length
csb.bio.sequence.SequenceAdapter.__repr__	csb.bio.sequence.SequenceAdapter-class.html#__repr__
csb.bio.sequence.SequenceAlignment	csb.bio.sequence.SequenceAlignment-class.html
csb.bio.sequence.AbstractAlignment.__metaclass__	abc.ABCMeta-class.html
csb.bio.sequence.AbstractAlignment._abc_negative_cache	csb.bio.sequence.AbstractAlignment-class.html#_abc_negative_cache
csb.bio.sequence.AbstractAlignment._factory	csb.bio.sequence.AbstractAlignment-class.html#_factory
csb.bio.sequence.SequenceAlignment.parse	csb.bio.sequence.SequenceAlignment-class.html#parse
csb.bio.sequence.AbstractAlignment.subregion	csb.bio.sequence.AbstractAlignment-class.html#subregion
csb.bio.sequence.AbstractAlignment.__init__	csb.bio.sequence.AbstractAlignment-class.html#__init__
csb.bio.sequence.AbstractAlignment.size	csb.bio.sequence.AbstractAlignment-class.html#size
csb.bio.sequence.AbstractAlignment._abc_cache	csb.bio.sequence.AbstractAlignment-class.html#_abc_cache
csb.bio.sequence.AbstractAlignment.rows	csb.bio.sequence.AbstractAlignment-class.html#rows
csb.bio.sequence.SequenceAlignment._construct	csb.bio.sequence.SequenceAlignment-class.html#_construct
csb.bio.sequence.AbstractAlignment._range	csb.bio.sequence.AbstractAlignment-class.html#_range
csb.bio.sequence.AbstractAlignment._extract	csb.bio.sequence.AbstractAlignment-class.html#_extract
csb.bio.sequence.SequenceAlignment.__abstractmethods__	csb.bio.sequence.SequenceAlignment-class.html#__abstractmethods__
csb.bio.sequence.AbstractAlignment.add	csb.bio.sequence.AbstractAlignment-class.html#add
csb.bio.sequence.AbstractAlignment.columns	csb.bio.sequence.AbstractAlignment-class.html#columns
csb.bio.sequence.AbstractAlignment.gap_at	csb.bio.sequence.AbstractAlignment-class.html#gap_at
csb.bio.sequence.AbstractAlignment._get_column	csb.bio.sequence.AbstractAlignment-class.html#_get_column
csb.bio.sequence.AbstractAlignment.__getitem__	csb.bio.sequence.AbstractAlignment-class.html#__getitem__
csb.bio.sequence.AbstractAlignment.format	csb.bio.sequence.AbstractAlignment-class.html#format
csb.bio.sequence.AbstractAlignment.__iter__	csb.bio.sequence.AbstractAlignment-class.html#__iter__
csb.bio.sequence.AbstractAlignment._initialize	csb.bio.sequence.AbstractAlignment-class.html#_initialize
csb.bio.sequence.AbstractAlignment.length	csb.bio.sequence.AbstractAlignment-class.html#length
csb.bio.sequence.AbstractAlignment._abc_negative_cache_version	csb.bio.sequence.AbstractAlignment-class.html#_abc_negative_cache_version
csb.bio.sequence.AbstractAlignment._abc_registry	csb.bio.sequence.AbstractAlignment-class.html#_abc_registry
csb.bio.sequence.SequenceAlphabets	csb.bio.sequence.SequenceAlphabets-class.html
csb.bio.sequence.SequenceAlphabets.Unknown	csb.bio.sequence.UnknownAlphabet-class.html
csb.bio.sequence.SequenceAlphabets.ALL_ALPHABETS	csb.bio.sequence.SequenceAlphabets-class.html#ALL_ALPHABETS
csb.bio.sequence.SequenceAlphabets.contains	csb.bio.sequence.SequenceAlphabets-class.html#contains
csb.bio.sequence.SequenceAlphabets.get	csb.bio.sequence.SequenceAlphabets-class.html#get
csb.bio.sequence.SequenceAlphabets.StdProtein	csb.bio.sequence.StdProteinAlphabet-class.html
csb.bio.sequence.SequenceAlphabets.MAP	csb.bio.sequence.SequenceAlphabets-class.html#MAP
csb.bio.sequence.SequenceAlphabets.Nucleic	csb.bio.sequence.NucleicAlphabet-class.html
csb.bio.sequence.SequenceAlphabets.Protein	csb.bio.sequence.ProteinAlphabet-class.html
csb.bio.sequence.SequenceCollection	csb.bio.sequence.SequenceCollection-class.html
csb.core.BaseCollectionContainer._exception	csb.core.BaseCollectionContainer-class.html#_exception
csb.bio.sequence.SequenceCollection.to_fasta	csb.bio.sequence.SequenceCollection-class.html#to_fasta
csb.core.BaseCollectionContainer.last_index	csb.core.BaseCollectionContainer-class.html#last_index
csb.bio.sequence.SequenceCollection.__init__	csb.bio.sequence.SequenceCollection-class.html#__init__
csb.core.BaseCollectionContainer.__contains__	csb.core.BaseCollectionContainer-class.html#__contains__
csb.core.BaseCollectionContainer._getinternal	csb.core.BaseCollectionContainer-class.html#_getinternal
csb.core.BaseCollectionContainer._update_items	csb.core.BaseCollectionContainer-class.html#_update_items
csb.core.BaseCollectionContainer.__len__	csb.core.BaseCollectionContainer-class.html#__len__
csb.core.BaseCollectionContainer.__getitem__	csb.core.BaseCollectionContainer-class.html#__getitem__
csb.core.BaseCollectionContainer.__iter__	csb.core.BaseCollectionContainer-class.html#__iter__
csb.core.BaseCollectionContainer.__bool__	csb.core.BaseCollectionContainer-class.html#__bool__
csb.core.BaseCollectionContainer.start_index	csb.core.BaseCollectionContainer-class.html#start_index
csb.core.BaseCollectionContainer._append_item	csb.core.BaseCollectionContainer-class.html#_append_item
csb.core.BaseCollectionContainer.__nonzero__	csb.core.BaseCollectionContainer-class.html#__nonzero__
csb.core.BaseCollectionContainer._sort	csb.core.BaseCollectionContainer-class.html#_sort
csb.core.BaseCollectionContainer.length	csb.core.BaseCollectionContainer-class.html#length
csb.core.BaseCollectionContainer.__repr__	csb.core.BaseCollectionContainer-class.html#__repr__
csb.bio.sequence.SequenceError	csb.bio.sequence.SequenceError-class.html
csb.bio.sequence.SequenceIndexer	csb.bio.sequence.SequenceIndexer-class.html
csb.bio.sequence.SequenceIndexer.__getitem__	csb.bio.sequence.SequenceIndexer-class.html#__getitem__
csb.bio.sequence.SequenceIndexer.__iter__	csb.bio.sequence.SequenceIndexer-class.html#__iter__
csb.bio.sequence.SequenceIndexer.__init__	csb.bio.sequence.SequenceIndexer-class.html#__init__
csb.bio.sequence.SequenceNotFoundError	csb.bio.sequence.SequenceNotFoundError-class.html
csb.bio.sequence.SequencePositionError	csb.bio.sequence.SequencePositionError-class.html
csb.bio.sequence.PositionError.__str__	csb.bio.sequence.PositionError-class.html#__str__
csb.bio.sequence.PositionError.__init__	csb.bio.sequence.PositionError-class.html#__init__
csb.bio.sequence.SequenceTypes	csb.bio.sequence.SequenceTypes-class.html
csb.bio.sequence.SequenceTypes.Unknown	csb.bio.sequence.SequenceTypes-class.html#Unknown
csb.core.enum.__init__	csb.core.enum-class.html#__init__
csb.bio.sequence.SequenceTypes.NucleicAcid	csb.bio.sequence.SequenceTypes-class.html#NucleicAcid
csb.bio.sequence.SequenceTypes._namesci	csb.bio.sequence.SequenceTypes-class.html#_namesci
csb.bio.sequence.SequenceTypes._valuesci	csb.bio.sequence.SequenceTypes-class.html#_valuesci
csb.bio.sequence.SequenceTypes.DNA	csb.bio.sequence.SequenceTypes-class.html#DNA
csb.bio.sequence.SequenceTypes._names	csb.bio.sequence.SequenceTypes-class.html#_names
csb.bio.sequence.SequenceTypes.RNA	csb.bio.sequence.SequenceTypes-class.html#RNA
csb.bio.sequence.SequenceTypes._name	csb.bio.sequence.SequenceTypes-class.html#_name
csb.bio.sequence.SequenceTypes._values	csb.bio.sequence.SequenceTypes-class.html#_values
csb.bio.sequence.SequenceTypes.Protein	csb.bio.sequence.SequenceTypes-class.html#Protein
csb.bio.sequence.SliceHelper	csb.bio.sequence.SliceHelper-class.html
csb.bio.sequence.SliceHelper.__init__	csb.bio.sequence.SliceHelper-class.html#__init__
csb.bio.sequence.StdProteinAlphabet	csb.bio.sequence.StdProteinAlphabet-class.html
csb.bio.sequence.StdProteinAlphabet.ILE	csb.bio.sequence.StdProteinAlphabet-class.html#ILE
csb.bio.sequence.StdProteinAlphabet.GLN	csb.bio.sequence.StdProteinAlphabet-class.html#GLN
csb.bio.sequence.StdProteinAlphabet.GLY	csb.bio.sequence.StdProteinAlphabet-class.html#GLY
csb.bio.sequence.StdProteinAlphabet.ALA	csb.bio.sequence.StdProteinAlphabet-class.html#ALA
csb.bio.sequence.StdProteinAlphabet.GLU	csb.bio.sequence.StdProteinAlphabet-class.html#GLU
csb.core.enum.__init__	csb.core.enum-class.html#__init__
csb.bio.sequence.StdProteinAlphabet.CYS	csb.bio.sequence.StdProteinAlphabet-class.html#CYS
csb.bio.sequence.StdProteinAlphabet.HIS	csb.bio.sequence.StdProteinAlphabet-class.html#HIS
csb.bio.sequence.StdProteinAlphabet.SER	csb.bio.sequence.StdProteinAlphabet-class.html#SER
csb.bio.sequence.StdProteinAlphabet.LYS	csb.bio.sequence.StdProteinAlphabet-class.html#LYS
csb.bio.sequence.StdProteinAlphabet.PRO	csb.bio.sequence.StdProteinAlphabet-class.html#PRO
csb.bio.sequence.StdProteinAlphabet._namesci	csb.bio.sequence.StdProteinAlphabet-class.html#_namesci
csb.bio.sequence.StdProteinAlphabet._valuesci	csb.bio.sequence.StdProteinAlphabet-class.html#_valuesci
csb.bio.sequence.StdProteinAlphabet.ASN	csb.bio.sequence.StdProteinAlphabet-class.html#ASN
csb.bio.sequence.StdProteinAlphabet.VAL	csb.bio.sequence.StdProteinAlphabet-class.html#VAL
csb.bio.sequence.StdProteinAlphabet._names	csb.bio.sequence.StdProteinAlphabet-class.html#_names
csb.bio.sequence.StdProteinAlphabet.THR	csb.bio.sequence.StdProteinAlphabet-class.html#THR
csb.bio.sequence.StdProteinAlphabet.ASP	csb.bio.sequence.StdProteinAlphabet-class.html#ASP
csb.bio.sequence.StdProteinAlphabet.TRP	csb.bio.sequence.StdProteinAlphabet-class.html#TRP
csb.bio.sequence.StdProteinAlphabet.PHE	csb.bio.sequence.StdProteinAlphabet-class.html#PHE
csb.bio.sequence.StdProteinAlphabet._name	csb.bio.sequence.StdProteinAlphabet-class.html#_name
csb.bio.sequence.StdProteinAlphabet.MET	csb.bio.sequence.StdProteinAlphabet-class.html#MET
csb.bio.sequence.StdProteinAlphabet.LEU	csb.bio.sequence.StdProteinAlphabet-class.html#LEU
csb.bio.sequence.StdProteinAlphabet._values	csb.bio.sequence.StdProteinAlphabet-class.html#_values
csb.bio.sequence.StdProteinAlphabet.ARG	csb.bio.sequence.StdProteinAlphabet-class.html#ARG
csb.bio.sequence.StdProteinAlphabet.TYR	csb.bio.sequence.StdProteinAlphabet-class.html#TYR
csb.bio.sequence.StructureAlignment	csb.bio.sequence.StructureAlignment-class.html
csb.bio.sequence.AbstractAlignment.__metaclass__	abc.ABCMeta-class.html
csb.bio.sequence.AbstractAlignment._abc_negative_cache	csb.bio.sequence.AbstractAlignment-class.html#_abc_negative_cache
csb.bio.sequence.AbstractAlignment._factory	csb.bio.sequence.AbstractAlignment-class.html#_factory
csb.bio.sequence.StructureAlignment.parse	csb.bio.sequence.StructureAlignment-class.html#parse
csb.bio.sequence.AbstractAlignment.subregion	csb.bio.sequence.AbstractAlignment-class.html#subregion
csb.bio.sequence.AbstractAlignment.__init__	csb.bio.sequence.AbstractAlignment-class.html#__init__
csb.bio.sequence.AbstractAlignment.size	csb.bio.sequence.AbstractAlignment-class.html#size
csb.bio.sequence.AbstractAlignment._abc_cache	csb.bio.sequence.AbstractAlignment-class.html#_abc_cache
csb.bio.sequence.AbstractAlignment.rows	csb.bio.sequence.AbstractAlignment-class.html#rows
csb.bio.sequence.StructureAlignment._construct	csb.bio.sequence.StructureAlignment-class.html#_construct
csb.bio.sequence.AbstractAlignment._range	csb.bio.sequence.AbstractAlignment-class.html#_range
csb.bio.sequence.AbstractAlignment._extract	csb.bio.sequence.AbstractAlignment-class.html#_extract
csb.bio.sequence.StructureAlignment.__abstractmethods__	csb.bio.sequence.StructureAlignment-class.html#__abstractmethods__
csb.bio.sequence.AbstractAlignment.add	csb.bio.sequence.AbstractAlignment-class.html#add
csb.bio.sequence.AbstractAlignment.columns	csb.bio.sequence.AbstractAlignment-class.html#columns
csb.bio.sequence.AbstractAlignment.gap_at	csb.bio.sequence.AbstractAlignment-class.html#gap_at
csb.bio.sequence.AbstractAlignment._get_column	csb.bio.sequence.AbstractAlignment-class.html#_get_column
csb.bio.sequence.AbstractAlignment.__getitem__	csb.bio.sequence.AbstractAlignment-class.html#__getitem__
csb.bio.sequence.AbstractAlignment.format	csb.bio.sequence.AbstractAlignment-class.html#format
csb.bio.sequence.AbstractAlignment.__iter__	csb.bio.sequence.AbstractAlignment-class.html#__iter__
csb.bio.sequence.AbstractAlignment._initialize	csb.bio.sequence.AbstractAlignment-class.html#_initialize
csb.bio.sequence.AbstractAlignment.length	csb.bio.sequence.AbstractAlignment-class.html#length
csb.bio.sequence.AbstractAlignment._abc_negative_cache_version	csb.bio.sequence.AbstractAlignment-class.html#_abc_negative_cache_version
csb.bio.sequence.AbstractAlignment._abc_registry	csb.bio.sequence.AbstractAlignment-class.html#_abc_registry
csb.bio.sequence.UngappedSequenceIndexer	csb.bio.sequence.UngappedSequenceIndexer-class.html
csb.bio.sequence.UngappedSequenceIndexer.__getitem__	csb.bio.sequence.UngappedSequenceIndexer-class.html#__getitem__
csb.bio.sequence.UngappedSequenceIndexer.__iter__	csb.bio.sequence.UngappedSequenceIndexer-class.html#__iter__
csb.bio.sequence.SequenceIndexer.__init__	csb.bio.sequence.SequenceIndexer-class.html#__init__
csb.bio.sequence.UnknownAlphabet	csb.bio.sequence.UnknownAlphabet-class.html
csb.core.enum.__init__	csb.core.enum-class.html#__init__
csb.bio.sequence.UnknownAlphabet._namesci	csb.bio.sequence.UnknownAlphabet-class.html#_namesci
csb.bio.sequence.UnknownAlphabet.GAP	csb.bio.sequence.UnknownAlphabet-class.html#GAP
csb.bio.sequence.UnknownAlphabet._valuesci	csb.bio.sequence.UnknownAlphabet-class.html#_valuesci
csb.bio.sequence.UnknownAlphabet.INSERTION	csb.bio.sequence.UnknownAlphabet-class.html#INSERTION
csb.bio.sequence.UnknownAlphabet._names	csb.bio.sequence.UnknownAlphabet-class.html#_names
csb.bio.sequence.UnknownAlphabet.UNK	csb.bio.sequence.UnknownAlphabet-class.html#UNK
csb.bio.sequence.UnknownAlphabet._name	csb.bio.sequence.UnknownAlphabet-class.html#_name
csb.bio.sequence.UnknownAlphabet._values	csb.bio.sequence.UnknownAlphabet-class.html#_values
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm.__metaclass__	abc.ABCMeta-class.html
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm._fill	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#_fill
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm._expandable	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#_expandable
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm._sequence	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#_sequence
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm._abc_negative_cache	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#_abc_negative_cache
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm.__init__	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#__init__
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm._abc_cache	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#_abc_cache
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm._terminus	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#_terminus
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm.__abstractmethods__	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#__abstractmethods__
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm._traceback	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#_traceback
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm._score	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#_score
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm.scoring_matrix	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#scoring_matrix
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm.gap	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#gap
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm.align	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#align
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm._max	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#_max
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm._abc_negative_cache_version	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#_abc_negative_cache_version
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm._abc_registry	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#_abc_registry
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm._initialize	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#_initialize
csb.bio.sequence.alignment.AbstractScoringMatrix	csb.bio.sequence.alignment.AbstractScoringMatrix-class.html
csb.bio.sequence.alignment.AbstractScoringMatrix._abc_cache	csb.bio.sequence.alignment.AbstractScoringMatrix-class.html#_abc_cache
csb.bio.sequence.alignment.AbstractScoringMatrix.__metaclass__	abc.ABCMeta-class.html
csb.bio.sequence.alignment.AbstractScoringMatrix._abc_negative_cache	csb.bio.sequence.alignment.AbstractScoringMatrix-class.html#_abc_negative_cache
csb.bio.sequence.alignment.AbstractScoringMatrix.__abstractmethods__	csb.bio.sequence.alignment.AbstractScoringMatrix-class.html#__abstractmethods__
csb.bio.sequence.alignment.AbstractScoringMatrix.score	csb.bio.sequence.alignment.AbstractScoringMatrix-class.html#score
csb.bio.sequence.alignment.AbstractScoringMatrix._abc_negative_cache_version	csb.bio.sequence.alignment.AbstractScoringMatrix-class.html#_abc_negative_cache_version
csb.bio.sequence.alignment.AbstractScoringMatrix._abc_registry	csb.bio.sequence.alignment.AbstractScoringMatrix-class.html#_abc_registry
csb.bio.sequence.alignment.AlignmentResult	csb.bio.sequence.alignment.AlignmentResult-class.html
csb.bio.sequence.alignment.AlignmentResult.__str__	csb.bio.sequence.alignment.AlignmentResult-class.html#__str__
csb.bio.sequence.alignment.AlignmentResult.gaps	csb.bio.sequence.alignment.AlignmentResult-class.html#gaps
csb.bio.sequence.alignment.AlignmentResult.query	csb.bio.sequence.alignment.AlignmentResult-class.html#query
csb.bio.sequence.alignment.AlignmentResult.qstart	csb.bio.sequence.alignment.AlignmentResult-class.html#qstart
csb.bio.sequence.alignment.AlignmentResult.alignment	csb.bio.sequence.alignment.AlignmentResult-class.html#alignment
csb.bio.sequence.alignment.AlignmentResult.subject	csb.bio.sequence.alignment.AlignmentResult-class.html#subject
csb.bio.sequence.alignment.AlignmentResult.end	csb.bio.sequence.alignment.AlignmentResult-class.html#end
csb.bio.sequence.alignment.AlignmentResult.start	csb.bio.sequence.alignment.AlignmentResult-class.html#start
csb.bio.sequence.alignment.AlignmentResult.score	csb.bio.sequence.alignment.AlignmentResult-class.html#score
csb.bio.sequence.alignment.AlignmentResult.__init__	csb.bio.sequence.alignment.AlignmentResult-class.html#__init__
csb.bio.sequence.alignment.AlignmentResult.qend	csb.bio.sequence.alignment.AlignmentResult-class.html#qend
csb.bio.sequence.alignment.AlignmentResult.is_empty	csb.bio.sequence.alignment.AlignmentResult-class.html#is_empty
csb.bio.sequence.alignment.AlignmentResult.identity	csb.bio.sequence.alignment.AlignmentResult-class.html#identity
csb.bio.sequence.alignment.AlignmentResult.identicals	csb.bio.sequence.alignment.AlignmentResult-class.html#identicals
csb.bio.sequence.alignment.AlignmentResult.length	csb.bio.sequence.alignment.AlignmentResult-class.html#length
csb.bio.sequence.alignment.GlobalAlignmentAlgorithm	csb.bio.sequence.alignment.GlobalAlignmentAlgorithm-class.html
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm.__metaclass__	abc.ABCMeta-class.html
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm._fill	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#_fill
csb.bio.sequence.alignment.GlobalAlignmentAlgorithm._expandable	csb.bio.sequence.alignment.GlobalAlignmentAlgorithm-class.html#_expandable
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm._score	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#_score
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm._abc_negative_cache	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#_abc_negative_cache
csb.bio.sequence.alignment.GlobalAlignmentAlgorithm.__init__	csb.bio.sequence.alignment.GlobalAlignmentAlgorithm-class.html#__init__
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm._abc_cache	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#_abc_cache
csb.bio.sequence.alignment.GlobalAlignmentAlgorithm._terminus	csb.bio.sequence.alignment.GlobalAlignmentAlgorithm-class.html#_terminus
csb.bio.sequence.alignment.GlobalAlignmentAlgorithm.__abstractmethods__	csb.bio.sequence.alignment.GlobalAlignmentAlgorithm-class.html#__abstractmethods__
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm._traceback	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#_traceback
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm._sequence	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#_sequence
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm.scoring_matrix	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#scoring_matrix
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm.gap	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#gap
csb.bio.sequence.alignment.GlobalAlignmentAlgorithm._initialize	csb.bio.sequence.alignment.GlobalAlignmentAlgorithm-class.html#_initialize
csb.bio.sequence.alignment.GlobalAlignmentAlgorithm._max	csb.bio.sequence.alignment.GlobalAlignmentAlgorithm-class.html#_max
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm._abc_negative_cache_version	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#_abc_negative_cache_version
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm._abc_registry	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#_abc_registry
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm.align	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#align
csb.bio.sequence.alignment.IdentityMatrix	csb.bio.sequence.alignment.IdentityMatrix-class.html
csb.bio.sequence.alignment.AbstractScoringMatrix.__metaclass__	abc.ABCMeta-class.html
csb.bio.sequence.alignment.AbstractScoringMatrix._abc_negative_cache	csb.bio.sequence.alignment.AbstractScoringMatrix-class.html#_abc_negative_cache
csb.bio.sequence.alignment.IdentityMatrix.__init__	csb.bio.sequence.alignment.IdentityMatrix-class.html#__init__
csb.bio.sequence.alignment.IdentityMatrix._abc_cache	csb.bio.sequence.alignment.IdentityMatrix-class.html#_abc_cache
csb.bio.sequence.alignment.IdentityMatrix.__abstractmethods__	csb.bio.sequence.alignment.IdentityMatrix-class.html#__abstractmethods__
csb.bio.sequence.alignment.IdentityMatrix.score	csb.bio.sequence.alignment.IdentityMatrix-class.html#score
csb.bio.sequence.alignment.IdentityMatrix.match	csb.bio.sequence.alignment.IdentityMatrix-class.html#match
csb.bio.sequence.alignment.IdentityMatrix.mismatch	csb.bio.sequence.alignment.IdentityMatrix-class.html#mismatch
csb.bio.sequence.alignment.AbstractScoringMatrix._abc_negative_cache_version	csb.bio.sequence.alignment.AbstractScoringMatrix-class.html#_abc_negative_cache_version
csb.bio.sequence.alignment.AbstractScoringMatrix._abc_registry	csb.bio.sequence.alignment.AbstractScoringMatrix-class.html#_abc_registry
csb.bio.sequence.alignment.LocalAlignmentAlgorithm	csb.bio.sequence.alignment.LocalAlignmentAlgorithm-class.html
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm.__metaclass__	abc.ABCMeta-class.html
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm._fill	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#_fill
csb.bio.sequence.alignment.LocalAlignmentAlgorithm._expandable	csb.bio.sequence.alignment.LocalAlignmentAlgorithm-class.html#_expandable
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm._score	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#_score
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm._abc_negative_cache	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#_abc_negative_cache
csb.bio.sequence.alignment.LocalAlignmentAlgorithm.__init__	csb.bio.sequence.alignment.LocalAlignmentAlgorithm-class.html#__init__
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm._abc_cache	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#_abc_cache
csb.bio.sequence.alignment.LocalAlignmentAlgorithm._terminus	csb.bio.sequence.alignment.LocalAlignmentAlgorithm-class.html#_terminus
csb.bio.sequence.alignment.LocalAlignmentAlgorithm.__abstractmethods__	csb.bio.sequence.alignment.LocalAlignmentAlgorithm-class.html#__abstractmethods__
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm._traceback	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#_traceback
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm._sequence	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#_sequence
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm.scoring_matrix	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#scoring_matrix
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm.gap	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#gap
csb.bio.sequence.alignment.LocalAlignmentAlgorithm.START	csb.bio.sequence.alignment.LocalAlignmentAlgorithm-class.html#START
csb.bio.sequence.alignment.LocalAlignmentAlgorithm._initialize	csb.bio.sequence.alignment.LocalAlignmentAlgorithm-class.html#_initialize
csb.bio.sequence.alignment.LocalAlignmentAlgorithm._max	csb.bio.sequence.alignment.LocalAlignmentAlgorithm-class.html#_max
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm._abc_negative_cache_version	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#_abc_negative_cache_version
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm._abc_registry	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#_abc_registry
csb.bio.sequence.alignment.AbstractAlignmentAlgorithm.align	csb.bio.sequence.alignment.AbstractAlignmentAlgorithm-class.html#align
csb.bio.sequence.alignment.ResidueNotFoundError	csb.bio.sequence.alignment.ResidueNotFoundError-class.html
csb.bio.sequence.alignment.SimilarityMatrix	csb.bio.sequence.alignment.SimilarityMatrix-class.html
csb.bio.sequence.alignment.AbstractScoringMatrix.__metaclass__	abc.ABCMeta-class.html
csb.bio.sequence.alignment.AbstractScoringMatrix._abc_negative_cache	csb.bio.sequence.alignment.AbstractScoringMatrix-class.html#_abc_negative_cache
csb.bio.sequence.alignment.SimilarityMatrix.parse	csb.bio.sequence.alignment.SimilarityMatrix-class.html#parse
csb.bio.sequence.alignment.SimilarityMatrix.__init__	csb.bio.sequence.alignment.SimilarityMatrix-class.html#__init__
csb.bio.sequence.alignment.SimilarityMatrix._abc_cache	csb.bio.sequence.alignment.SimilarityMatrix-class.html#_abc_cache
csb.bio.sequence.alignment.SimilarityMatrix.__abstractmethods__	csb.bio.sequence.alignment.SimilarityMatrix-class.html#__abstractmethods__
csb.bio.sequence.alignment.SimilarityMatrix.score	csb.bio.sequence.alignment.SimilarityMatrix-class.html#score
csb.bio.sequence.alignment.AbstractScoringMatrix._abc_negative_cache_version	csb.bio.sequence.alignment.AbstractScoringMatrix-class.html#_abc_negative_cache_version
csb.bio.sequence.alignment.SimilarityMatrix.BLOSUM62	csb.bio.sequence.alignment.SimilarityMatrix-class.html#BLOSUM62
csb.bio.sequence.alignment.AbstractScoringMatrix._abc_registry	csb.bio.sequence.alignment.AbstractScoringMatrix-class.html#_abc_registry
csb.bio.structure.AbstractEntity	csb.bio.structure.AbstractEntity-class.html
csb.bio.structure.AbstractEntity.__metaclass__	abc.ABCMeta-class.html
csb.bio.structure.AbstractEntity._abc_negative_cache	csb.bio.structure.AbstractEntity-class.html#_abc_negative_cache
csb.bio.structure.AbstractEntity._abc_cache	csb.bio.structure.AbstractEntity-class.html#_abc_cache
csb.bio.structure.AbstractEntity.__abstractmethods__	csb.bio.structure.AbstractEntity-class.html#__abstractmethods__
csb.bio.structure.AbstractEntity.transform	csb.bio.structure.AbstractEntity-class.html#transform
csb.bio.structure.AbstractEntity.items	csb.bio.structure.AbstractEntity-class.html#items
csb.bio.structure.AbstractEntity.get_coordinates	csb.bio.structure.AbstractEntity-class.html#get_coordinates
csb.bio.structure.AbstractEntity._abc_negative_cache_version	csb.bio.structure.AbstractEntity-class.html#_abc_negative_cache_version
csb.bio.structure.AbstractEntity.components	csb.bio.structure.AbstractEntity-class.html#components
csb.bio.structure.AbstractEntity._abc_registry	csb.bio.structure.AbstractEntity-class.html#_abc_registry
csb.bio.structure.AlignmentArgumentLengthError	csb.bio.structure.AlignmentArgumentLengthError-class.html
csb.bio.structure.AngleUnits	csb.bio.structure.AngleUnits-class.html
csb.bio.structure.AngleUnits._names	csb.bio.structure.AngleUnits-class.html#_names
csb.bio.structure.AngleUnits._namesci	csb.bio.structure.AngleUnits-class.html#_namesci
csb.bio.structure.AngleUnits._name	csb.bio.structure.AngleUnits-class.html#_name
csb.bio.structure.AngleUnits._valuesci	csb.bio.structure.AngleUnits-class.html#_valuesci
csb.bio.structure.AngleUnits.Degrees	csb.bio.structure.AngleUnits-class.html#Degrees
csb.core.enum.__init__	csb.core.enum-class.html#__init__
csb.bio.structure.AngleUnits._values	csb.bio.structure.AngleUnits-class.html#_values
csb.bio.structure.AngleUnits.Radians	csb.bio.structure.AngleUnits-class.html#Radians
csb.bio.structure.Atom	csb.bio.structure.Atom-class.html
csb.bio.structure.Atom.__abstractmethods__	csb.bio.structure.Atom-class.html#__abstractmethods__
csb.bio.structure.AbstractEntity.__metaclass__	abc.ABCMeta-class.html
csb.bio.structure.AbstractEntity._abc_negative_cache	csb.bio.structure.AbstractEntity-class.html#_abc_negative_cache
csb.bio.structure.Atom.__lt__	csb.bio.structure.Atom-class.html#__lt__
csb.bio.structure.Atom.__init__	csb.bio.structure.Atom-class.html#__init__
csb.bio.structure.Atom.residue	csb.bio.structure.Atom-class.html#residue
csb.bio.structure.Atom.alternate	csb.bio.structure.Atom-class.html#alternate
csb.bio.structure.Atom.transform	csb.bio.structure.Atom-class.html#transform
csb.bio.structure.Atom.occupancy	csb.bio.structure.Atom-class.html#occupancy
csb.bio.structure.Atom.charge	csb.bio.structure.Atom-class.html#charge
csb.bio.structure.Atom.vector	csb.bio.structure.Atom-class.html#vector
csb.bio.structure.Atom.serial_number	csb.bio.structure.Atom-class.html#serial_number
csb.bio.structure.AbstractEntity._abc_cache	csb.bio.structure.AbstractEntity-class.html#_abc_cache
csb.bio.structure.Atom.clone	csb.bio.structure.Atom-class.html#clone
csb.bio.structure.Atom.name	csb.bio.structure.Atom-class.html#name
csb.bio.structure.Atom.items	csb.bio.structure.Atom-class.html#items
csb.bio.structure.Atom.bfactor	csb.bio.structure.Atom-class.html#bfactor
csb.bio.structure.Atom.element	csb.bio.structure.Atom-class.html#element
csb.bio.structure.Atom.get_coordinates	csb.bio.structure.Atom-class.html#get_coordinates
csb.bio.structure.AbstractEntity._abc_negative_cache_version	csb.bio.structure.AbstractEntity-class.html#_abc_negative_cache_version
csb.bio.structure.Atom.__repr__	csb.bio.structure.Atom-class.html#__repr__
csb.bio.structure.AbstractEntity.components	csb.bio.structure.AbstractEntity-class.html#components
csb.bio.structure.AbstractEntity._abc_registry	csb.bio.structure.AbstractEntity-class.html#_abc_registry
csb.bio.structure.AtomNotFoundError	csb.bio.structure.AtomNotFoundError-class.html
csb.bio.structure.Broken3DStructureError	csb.bio.structure.Broken3DStructureError-class.html
csb.bio.structure.BrokenSecStructureError	csb.bio.structure.BrokenSecStructureError-class.html
csb.bio.structure.Chain	csb.bio.structure.Chain-class.html
csb.bio.structure.Chain.tm_score	csb.bio.structure.Chain-class.html#tm_score
csb.core.AbstractContainer.__metaclass__	abc.ABCMeta-class.html
csb.bio.structure.Chain._children	csb.bio.structure.Chain-class.html#_children
csb.core.AbstractContainer._abc_negative_cache	csb.core.AbstractContainer-class.html#_abc_negative_cache
csb.bio.structure.Chain.accession	csb.bio.structure.Chain-class.html#accession
csb.bio.structure.Chain.header	csb.bio.structure.Chain-class.html#header
csb.bio.structure.Chain.subregion	csb.bio.structure.Chain-class.html#subregion
csb.bio.structure.Chain.entry_id	csb.bio.structure.Chain-class.html#entry_id
csb.bio.structure.Chain.compute_torsion	csb.bio.structure.Chain-class.html#compute_torsion
csb.bio.structure.Chain.id	csb.bio.structure.Chain-class.html#id
csb.bio.structure.Chain.__init__	csb.bio.structure.Chain-class.html#__init__
csb.bio.structure.Chain.torsion	csb.bio.structure.Chain-class.html#torsion
csb.core.AbstractContainer._abc_cache	csb.core.AbstractContainer-class.html#_abc_cache
csb.bio.structure.Chain.tm_superimpose	csb.bio.structure.Chain-class.html#tm_superimpose
csb.bio.structure.Chain.alphabet	csb.bio.structure.Chain-class.html#alphabet
csb.bio.structure.Chain.__abstractmethods__	csb.bio.structure.Chain-class.html#__abstractmethods__
csb.bio.structure.AbstractEntity.transform	csb.bio.structure.AbstractEntity-class.html#transform
csb.bio.structure.Chain.find	csb.bio.structure.Chain-class.html#find
csb.bio.structure.Chain.type	csb.bio.structure.Chain-class.html#type
csb.bio.structure.Chain.__len__	csb.bio.structure.Chain-class.html#__len__
csb.core.AbstractNIContainer.__getitem__	csb.core.AbstractNIContainer-class.html#__getitem__
csb.bio.structure.Chain.clone	csb.bio.structure.Chain-class.html#clone
csb.bio.structure.Chain.sequence	csb.bio.structure.Chain-class.html#sequence
csb.bio.structure.Chain.residues	csb.bio.structure.Chain-class.html#residues
csb.core.AbstractContainer.__iter__	csb.core.AbstractContainer-class.html#__iter__
csb.bio.structure.Chain.has_torsion	csb.bio.structure.Chain-class.html#has_torsion
csb.bio.structure.Chain.secondary_structure	csb.bio.structure.Chain-class.html#secondary_structure
csb.core.AbstractContainer.__bool__	csb.core.AbstractContainer-class.html#__bool__
csb.bio.structure.Chain.superimpose	csb.bio.structure.Chain-class.html#superimpose
csb.bio.structure.Chain.molecule_id	csb.bio.structure.Chain-class.html#molecule_id
csb.core.AbstractContainer.__nonzero__	csb.core.AbstractContainer-class.html#__nonzero__
csb.bio.structure.Chain.name	csb.bio.structure.Chain-class.html#name
csb.bio.structure.Chain.rmsd	csb.bio.structure.Chain-class.html#rmsd
csb.bio.structure.Chain.items	csb.bio.structure.Chain-class.html#items
csb.bio.structure.Chain.align	csb.bio.structure.Chain-class.html#align
csb.bio.structure.Chain.from_sequence	csb.bio.structure.Chain-class.html#from_sequence
csb.bio.structure.Chain.length	csb.bio.structure.Chain-class.html#length
csb.bio.structure.AbstractEntity.get_coordinates	csb.bio.structure.AbstractEntity-class.html#get_coordinates
csb.bio.structure.Chain._abc_negative_cache_version	csb.bio.structure.Chain-class.html#_abc_negative_cache_version
csb.bio.structure.Chain.__repr__	csb.bio.structure.Chain-class.html#__repr__
csb.bio.structure.AbstractEntity.components	csb.bio.structure.AbstractEntity-class.html#components
csb.core.AbstractContainer._abc_registry	csb.core.AbstractContainer-class.html#_abc_registry
csb.bio.structure.ChainNotFoundError	csb.bio.structure.ChainNotFoundError-class.html
csb.bio.structure.ChainResiduesCollection	csb.bio.structure.ChainResiduesCollection-class.html
csb.bio.structure.ChainResiduesCollection._exception	csb.bio.structure.ChainResiduesCollection-class.html#_exception
csb.core.CollectionContainer._update	csb.core.CollectionContainer-class.html#_update
csb.bio.structure.ChainResiduesCollection._get_residue	csb.bio.structure.ChainResiduesCollection-class.html#_get_residue
csb.bio.structure.ChainResiduesCollection._add	csb.bio.structure.ChainResiduesCollection-class.html#_add
csb.bio.structure.ChainResiduesCollection.__init__	csb.bio.structure.ChainResiduesCollection-class.html#__init__
csb.core.BaseCollectionContainer.__contains__	csb.core.BaseCollectionContainer-class.html#__contains__
csb.bio.structure.ChainResiduesCollection._contains	csb.bio.structure.ChainResiduesCollection-class.html#_contains
csb.core.BaseCollectionContainer._getinternal	csb.core.BaseCollectionContainer-class.html#_getinternal
csb.bio.structure.ChainResiduesCollection._remove	csb.bio.structure.ChainResiduesCollection-class.html#_remove
csb.bio.structure.ChainResiduesCollection.append	csb.bio.structure.ChainResiduesCollection-class.html#append
csb.core.BaseCollectionContainer._update_items	csb.core.BaseCollectionContainer-class.html#_update_items
csb.core.BaseCollectionContainer.__len__	csb.core.BaseCollectionContainer-class.html#__len__
csb.core.BaseCollectionContainer.last_index	csb.core.BaseCollectionContainer-class.html#last_index
csb.core.BaseCollectionContainer.__getitem__	csb.core.BaseCollectionContainer-class.html#__getitem__
csb.core.BaseCollectionContainer.__iter__	csb.core.BaseCollectionContainer-class.html#__iter__
csb.core.BaseCollectionContainer.__bool__	csb.core.BaseCollectionContainer-class.html#__bool__
csb.core.BaseCollectionContainer.start_index	csb.core.BaseCollectionContainer-class.html#start_index
csb.core.BaseCollectionContainer._append_item	csb.core.BaseCollectionContainer-class.html#_append_item
csb.core.BaseCollectionContainer.__nonzero__	csb.core.BaseCollectionContainer-class.html#__nonzero__
csb.core.BaseCollectionContainer._sort	csb.core.BaseCollectionContainer-class.html#_sort
csb.core.BaseCollectionContainer.length	csb.core.BaseCollectionContainer-class.html#length
csb.bio.structure.ChainResiduesCollection.__repr__	csb.bio.structure.ChainResiduesCollection-class.html#__repr__
csb.bio.structure.ChemElements	csb.bio.structure.ChemElements-class.html
csb.bio.structure.ChemElements.Ru	csb.bio.structure.ChemElements-class.html#Ru
csb.bio.structure.ChemElements.Re	csb.bio.structure.ChemElements-class.html#Re
csb.bio.structure.ChemElements.Rf	csb.bio.structure.ChemElements-class.html#Rf
csb.bio.structure.ChemElements.Rg	csb.bio.structure.ChemElements-class.html#Rg
csb.bio.structure.ChemElements.Ra	csb.bio.structure.ChemElements-class.html#Ra
csb.bio.structure.ChemElements.Rb	csb.bio.structure.ChemElements-class.html#Rb
csb.bio.structure.ChemElements.Rn	csb.bio.structure.ChemElements-class.html#Rn
csb.bio.structure.ChemElements.Rh	csb.bio.structure.ChemElements-class.html#Rh
csb.bio.structure.ChemElements.Be	csb.bio.structure.ChemElements-class.html#Be
csb.bio.structure.ChemElements.Ba	csb.bio.structure.ChemElements-class.html#Ba
csb.bio.structure.ChemElements.Bh	csb.bio.structure.ChemElements-class.html#Bh
csb.bio.structure.ChemElements.Bi	csb.bio.structure.ChemElements-class.html#Bi
csb.bio.structure.ChemElements.Bk	csb.bio.structure.ChemElements-class.html#Bk
csb.bio.structure.ChemElements.Br	csb.bio.structure.ChemElements-class.html#Br
csb.bio.structure.ChemElements.H	csb.bio.structure.ChemElements-class.html#H
csb.bio.structure.ChemElements.P	csb.bio.structure.ChemElements-class.html#P
csb.bio.structure.ChemElements.Os	csb.bio.structure.ChemElements-class.html#Os
csb.bio.structure.ChemElements.Ge	csb.bio.structure.ChemElements-class.html#Ge
csb.bio.structure.ChemElements.Gd	csb.bio.structure.ChemElements-class.html#Gd
csb.bio.structure.ChemElements.Ga	csb.bio.structure.ChemElements-class.html#Ga
csb.bio.structure.ChemElements.x	csb.bio.structure.ChemElements-class.html#x
csb.bio.structure.ChemElements.Pr	csb.bio.structure.ChemElements-class.html#Pr
csb.bio.structure.ChemElements.Pt	csb.bio.structure.ChemElements-class.html#Pt
csb.bio.structure.ChemElements.Pu	csb.bio.structure.ChemElements-class.html#Pu
csb.bio.structure.ChemElements.C	csb.bio.structure.ChemElements-class.html#C
csb.bio.structure.ChemElements.Pb	csb.bio.structure.ChemElements-class.html#Pb
csb.bio.structure.ChemElements.Pa	csb.bio.structure.ChemElements-class.html#Pa
csb.bio.structure.ChemElements.Pd	csb.bio.structure.ChemElements-class.html#Pd
csb.bio.structure.ChemElements.Xe	csb.bio.structure.ChemElements-class.html#Xe
csb.bio.structure.ChemElements.Po	csb.bio.structure.ChemElements-class.html#Po
csb.bio.structure.ChemElements.Pm	csb.bio.structure.ChemElements-class.html#Pm
csb.bio.structure.ChemElements.Hs	csb.bio.structure.ChemElements-class.html#Hs
csb.bio.structure.ChemElements._namesci	csb.bio.structure.ChemElements-class.html#_namesci
csb.bio.structure.ChemElements.Ho	csb.bio.structure.ChemElements-class.html#Ho
csb.bio.structure.ChemElements.Hf	csb.bio.structure.ChemElements-class.html#Hf
csb.bio.structure.ChemElements.Hg	csb.bio.structure.ChemElements-class.html#Hg
csb.bio.structure.ChemElements.He	csb.bio.structure.ChemElements-class.html#He
csb.bio.structure.ChemElements.Md	csb.bio.structure.ChemElements-class.html#Md
csb.bio.structure.ChemElements.Mg	csb.bio.structure.ChemElements-class.html#Mg
csb.bio.structure.ChemElements.K	csb.bio.structure.ChemElements-class.html#K
csb.bio.structure.ChemElements.Mn	csb.bio.structure.ChemElements-class.html#Mn
csb.bio.structure.ChemElements.O	csb.bio.structure.ChemElements-class.html#O
csb.bio.structure.ChemElements.Mt	csb.bio.structure.ChemElements-class.html#Mt
csb.bio.structure.ChemElements.S	csb.bio.structure.ChemElements-class.html#S
csb.bio.structure.ChemElements.W	csb.bio.structure.ChemElements-class.html#W
csb.bio.structure.ChemElements.Zn	csb.bio.structure.ChemElements-class.html#Zn
csb.bio.structure.ChemElements._name	csb.bio.structure.ChemElements-class.html#_name
csb.bio.structure.ChemElements.Eu	csb.bio.structure.ChemElements-class.html#Eu
csb.bio.structure.ChemElements.Es	csb.bio.structure.ChemElements-class.html#Es
csb.bio.structure.ChemElements.Er	csb.bio.structure.ChemElements-class.html#Er
csb.bio.structure.ChemElements.Ni	csb.bio.structure.ChemElements-class.html#Ni
csb.bio.structure.ChemElements.No	csb.bio.structure.ChemElements-class.html#No
csb.bio.structure.ChemElements.Na	csb.bio.structure.ChemElements-class.html#Na
csb.bio.structure.ChemElements.Nb	csb.bio.structure.ChemElements-class.html#Nb
csb.bio.structure.ChemElements.Nd	csb.bio.structure.ChemElements-class.html#Nd
csb.bio.structure.ChemElements.Ne	csb.bio.structure.ChemElements-class.html#Ne
csb.bio.structure.ChemElements.Np	csb.bio.structure.ChemElements-class.html#Np
csb.bio.structure.ChemElements.Fr	csb.bio.structure.ChemElements-class.html#Fr
csb.core.EnumBase._valuesci	csb.core.EnumBase-class.html#_valuesci
csb.bio.structure.ChemElements.Fe	csb.bio.structure.ChemElements-class.html#Fe
csb.bio.structure.ChemElements.Fm	csb.bio.structure.ChemElements-class.html#Fm
csb.bio.structure.ChemElements.B	csb.bio.structure.ChemElements-class.html#B
csb.bio.structure.ChemElements.F	csb.bio.structure.ChemElements-class.html#F
csb.bio.structure.ChemElements.Sr	csb.bio.structure.ChemElements-class.html#Sr
csb.bio.structure.ChemElements._names	csb.bio.structure.ChemElements-class.html#_names
csb.bio.structure.ChemElements.N	csb.bio.structure.ChemElements-class.html#N
csb.bio.structure.ChemElements.Kr	csb.bio.structure.ChemElements-class.html#Kr
csb.bio.structure.ChemElements.Si	csb.bio.structure.ChemElements-class.html#Si
csb.bio.structure.ChemElements.Sn	csb.bio.structure.ChemElements-class.html#Sn
csb.bio.structure.ChemElements.Sm	csb.bio.structure.ChemElements-class.html#Sm
csb.bio.structure.ChemElements.V	csb.bio.structure.ChemElements-class.html#V
csb.bio.structure.ChemElements.Sc	csb.bio.structure.ChemElements-class.html#Sc
csb.bio.structure.ChemElements.Sb	csb.bio.structure.ChemElements-class.html#Sb
csb.bio.structure.ChemElements.Sg	csb.bio.structure.ChemElements-class.html#Sg
csb.bio.structure.ChemElements.Se	csb.bio.structure.ChemElements-class.html#Se
csb.bio.structure.ChemElements.Co	csb.bio.structure.ChemElements-class.html#Co
csb.bio.structure.ChemElements.Cm	csb.bio.structure.ChemElements-class.html#Cm
csb.bio.structure.ChemElements.Cl	csb.bio.structure.ChemElements-class.html#Cl
csb.bio.structure.ChemElements.Ca	csb.bio.structure.ChemElements-class.html#Ca
csb.bio.structure.ChemElements.Cf	csb.bio.structure.ChemElements-class.html#Cf
csb.bio.structure.ChemElements.Ce	csb.bio.structure.ChemElements-class.html#Ce
csb.bio.structure.ChemElements.Cd	csb.bio.structure.ChemElements-class.html#Cd
csb.bio.structure.ChemElements.Tm	csb.bio.structure.ChemElements-class.html#Tm
csb.bio.structure.ChemElements.Cs	csb.bio.structure.ChemElements-class.html#Cs
csb.bio.structure.ChemElements.Cr	csb.bio.structure.ChemElements-class.html#Cr
csb.bio.structure.ChemElements.Cu	csb.bio.structure.ChemElements-class.html#Cu
csb.bio.structure.ChemElements.La	csb.bio.structure.ChemElements-class.html#La
csb.bio.structure.ChemElements.Li	csb.bio.structure.ChemElements-class.html#Li
csb.bio.structure.ChemElements.Tl	csb.bio.structure.ChemElements-class.html#Tl
csb.bio.structure.ChemElements.Lu	csb.bio.structure.ChemElements-class.html#Lu
csb.bio.structure.ChemElements.Lr	csb.bio.structure.ChemElements-class.html#Lr
csb.bio.structure.ChemElements.Th	csb.bio.structure.ChemElements-class.html#Th
csb.bio.structure.ChemElements.Ti	csb.bio.structure.ChemElements-class.html#Ti
csb.bio.structure.ChemElements.Te	csb.bio.structure.ChemElements-class.html#Te
csb.bio.structure.ChemElements.Tb	csb.bio.structure.ChemElements-class.html#Tb
csb.bio.structure.ChemElements.Tc	csb.bio.structure.ChemElements-class.html#Tc
csb.core.enum.__init__	csb.core.enum-class.html#__init__
csb.bio.structure.ChemElements.Ta	csb.bio.structure.ChemElements-class.html#Ta
csb.bio.structure.ChemElements.Yb	csb.bio.structure.ChemElements-class.html#Yb
csb.bio.structure.ChemElements.Db	csb.bio.structure.ChemElements-class.html#Db
csb.bio.structure.ChemElements.Zr	csb.bio.structure.ChemElements-class.html#Zr
csb.bio.structure.ChemElements.Dy	csb.bio.structure.ChemElements-class.html#Dy
csb.bio.structure.ChemElements.Ds	csb.bio.structure.ChemElements-class.html#Ds
csb.bio.structure.ChemElements.I	csb.bio.structure.ChemElements-class.html#I
csb.bio.structure.ChemElements.U	csb.bio.structure.ChemElements-class.html#U
csb.bio.structure.ChemElements.Y	csb.bio.structure.ChemElements-class.html#Y
csb.bio.structure.ChemElements.Ac	csb.bio.structure.ChemElements-class.html#Ac
csb.bio.structure.ChemElements.Ag	csb.bio.structure.ChemElements-class.html#Ag
csb.bio.structure.ChemElements.Ir	csb.bio.structure.ChemElements-class.html#Ir
csb.bio.structure.ChemElements.Am	csb.bio.structure.ChemElements-class.html#Am
csb.bio.structure.ChemElements.Al	csb.bio.structure.ChemElements-class.html#Al
csb.bio.structure.ChemElements.As	csb.bio.structure.ChemElements-class.html#As
csb.bio.structure.ChemElements.Ar	csb.bio.structure.ChemElements-class.html#Ar
csb.bio.structure.ChemElements.Au	csb.bio.structure.ChemElements-class.html#Au
csb.bio.structure.ChemElements.At	csb.bio.structure.ChemElements-class.html#At
csb.bio.structure.ChemElements._values	csb.bio.structure.ChemElements-class.html#_values
csb.bio.structure.ChemElements.In	csb.bio.structure.ChemElements-class.html#In
csb.bio.structure.ChemElements.Mo	csb.bio.structure.ChemElements-class.html#Mo
csb.bio.structure.CompositeEntityIterator	csb.bio.structure.CompositeEntityIterator-class.html
csb.bio.structure.CompositeEntityIterator.create	csb.bio.structure.CompositeEntityIterator-class.html#create
csb.bio.structure.CompositeEntityIterator.__next__	csb.bio.structure.CompositeEntityIterator-class.html#__next__
csb.bio.structure.CompositeEntityIterator.next	csb.bio.structure.CompositeEntityIterator-class.html#next
csb.bio.structure.CompositeEntityIterator.__iter__	csb.bio.structure.CompositeEntityIterator-class.html#__iter__
csb.bio.structure.CompositeEntityIterator._inspect	csb.bio.structure.CompositeEntityIterator-class.html#_inspect
csb.bio.structure.CompositeEntityIterator.__init__	csb.bio.structure.CompositeEntityIterator-class.html#__init__
csb.bio.structure.ConfinedEntityIterator	csb.bio.structure.ConfinedEntityIterator-class.html
csb.bio.structure.CompositeEntityIterator.create	csb.bio.structure.CompositeEntityIterator-class.html#create
csb.bio.structure.CompositeEntityIterator.__next__	csb.bio.structure.CompositeEntityIterator-class.html#__next__
csb.bio.structure.CompositeEntityIterator.next	csb.bio.structure.CompositeEntityIterator-class.html#next
csb.bio.structure.CompositeEntityIterator.__iter__	csb.bio.structure.CompositeEntityIterator-class.html#__iter__
csb.bio.structure.ConfinedEntityIterator._inspect	csb.bio.structure.ConfinedEntityIterator-class.html#_inspect
csb.bio.structure.ConfinedEntityIterator.__init__	csb.bio.structure.ConfinedEntityIterator-class.html#__init__
csb.bio.structure.DisorderedAtom	csb.bio.structure.DisorderedAtom-class.html
csb.core.BaseCollectionContainer._exception	csb.core.BaseCollectionContainer-class.html#_exception
csb.core.CollectionContainer._update	csb.core.CollectionContainer-class.html#_update
csb.bio.structure.AbstractEntity.__metaclass__	abc.ABCMeta-class.html
csb.bio.structure.AbstractEntity._abc_negative_cache	csb.bio.structure.AbstractEntity-class.html#_abc_negative_cache
csb.core.BaseCollectionContainer.last_index	csb.core.BaseCollectionContainer-class.html#last_index
csb.core.BaseCollectionContainer._getinternal	csb.core.BaseCollectionContainer-class.html#_getinternal
csb.bio.structure.Atom.__lt__	csb.bio.structure.Atom-class.html#__lt__
csb.bio.structure.DisorderedAtom.find	csb.bio.structure.DisorderedAtom-class.html#find
csb.bio.structure.DisorderedAtom.append	csb.bio.structure.DisorderedAtom-class.html#append
csb.bio.structure.Atom.residue	csb.bio.structure.Atom-class.html#residue
csb.core.BaseCollectionContainer.__contains__	csb.core.BaseCollectionContainer-class.html#__contains__
csb.bio.structure.Atom.__abstractmethods__	csb.bio.structure.Atom-class.html#__abstractmethods__
csb.bio.structure.DisorderedAtom.transform	csb.bio.structure.DisorderedAtom-class.html#transform
csb.bio.structure.DisorderedAtom.__getattr__	csb.bio.structure.DisorderedAtom-class.html#__getattr__
csb.bio.structure.Atom.charge	csb.bio.structure.Atom-class.html#charge
csb.bio.structure.Atom.get_coordinates	csb.bio.structure.Atom-class.html#get_coordinates
csb.bio.structure.DisorderedAtom.__init__	csb.bio.structure.DisorderedAtom-class.html#__init__
csb.bio.structure.Atom.serial_number	csb.bio.structure.Atom-class.html#serial_number
csb.core.BaseCollectionContainer._update_items	csb.core.BaseCollectionContainer-class.html#_update_items
csb.core.BaseCollectionContainer.__len__	csb.core.BaseCollectionContainer-class.html#__len__
csb.bio.structure.DisorderedAtom.__update_rep	csb.bio.structure.DisorderedAtom-class.html#__update_rep
csb.bio.structure.Atom.alternate	csb.bio.structure.Atom-class.html#alternate
csb.bio.structure.Atom.occupancy	csb.bio.structure.Atom-class.html#occupancy
csb.core.BaseCollectionContainer.__getitem__	csb.core.BaseCollectionContainer-class.html#__getitem__
csb.bio.structure.Atom.clone	csb.bio.structure.Atom-class.html#clone
csb.core.BaseCollectionContainer.__iter__	csb.core.BaseCollectionContainer-class.html#__iter__
csb.core.BaseCollectionContainer.__bool__	csb.core.BaseCollectionContainer-class.html#__bool__
csb.core.BaseCollectionContainer.start_index	csb.core.BaseCollectionContainer-class.html#start_index
csb.core.BaseCollectionContainer._append_item	csb.core.BaseCollectionContainer-class.html#_append_item
csb.core.BaseCollectionContainer.__nonzero__	csb.core.BaseCollectionContainer-class.html#__nonzero__
csb.bio.structure.Atom.name	csb.bio.structure.Atom-class.html#name
csb.core.BaseCollectionContainer._sort	csb.core.BaseCollectionContainer-class.html#_sort
csb.bio.structure.Atom.items	csb.bio.structure.Atom-class.html#items
csb.bio.structure.Atom.bfactor	csb.bio.structure.Atom-class.html#bfactor
csb.bio.structure.Atom.element	csb.bio.structure.Atom-class.html#element
csb.bio.structure.AbstractEntity._abc_cache	csb.bio.structure.AbstractEntity-class.html#_abc_cache
csb.core.BaseCollectionContainer.length	csb.core.BaseCollectionContainer-class.html#length
csb.bio.structure.Atom.vector	csb.bio.structure.Atom-class.html#vector
csb.bio.structure.AbstractEntity._abc_negative_cache_version	csb.bio.structure.AbstractEntity-class.html#_abc_negative_cache_version
csb.bio.structure.DisorderedAtom.__repr__	csb.bio.structure.DisorderedAtom-class.html#__repr__
csb.bio.structure.AbstractEntity.components	csb.bio.structure.AbstractEntity-class.html#components
csb.bio.structure.AbstractEntity._abc_registry	csb.bio.structure.AbstractEntity-class.html#_abc_registry
csb.bio.structure.DuplicateAtomIDError	csb.bio.structure.DuplicateAtomIDError-class.html
csb.bio.structure.DuplicateChainIDError	csb.bio.structure.DuplicateChainIDError-class.html
csb.bio.structure.DuplicateModelIDError	csb.bio.structure.DuplicateModelIDError-class.html
csb.bio.structure.DuplicateResidueIDError	csb.bio.structure.DuplicateResidueIDError-class.html
csb.bio.structure.Ensemble	csb.bio.structure.Ensemble-class.html
csb.core.AbstractContainer.__metaclass__	abc.ABCMeta-class.html
csb.bio.structure.Ensemble._children	csb.bio.structure.Ensemble-class.html#_children
csb.core.AbstractContainer._abc_negative_cache	csb.core.AbstractContainer-class.html#_abc_negative_cache
csb.bio.structure.Ensemble.__init__	csb.bio.structure.Ensemble-class.html#__init__
csb.core.AbstractContainer._abc_cache	csb.core.AbstractContainer-class.html#_abc_cache
csb.bio.structure.Ensemble.__abstractmethods__	csb.bio.structure.Ensemble-class.html#__abstractmethods__
csb.bio.structure.AbstractEntity.transform	csb.bio.structure.AbstractEntity-class.html#transform
csb.core.AbstractContainer.__len__	csb.core.AbstractContainer-class.html#__len__
csb.core.AbstractNIContainer.__getitem__	csb.core.AbstractNIContainer-class.html#__getitem__
csb.bio.structure.Ensemble.models	csb.bio.structure.Ensemble-class.html#models
csb.bio.structure.Ensemble.to_pdb	csb.bio.structure.Ensemble-class.html#to_pdb
csb.core.AbstractContainer.__iter__	csb.core.AbstractContainer-class.html#__iter__
csb.core.AbstractContainer.__bool__	csb.core.AbstractContainer-class.html#__bool__
csb.core.AbstractContainer.__nonzero__	csb.core.AbstractContainer-class.html#__nonzero__
csb.bio.structure.Ensemble.items	csb.bio.structure.Ensemble-class.html#items
csb.bio.structure.AbstractEntity.get_coordinates	csb.bio.structure.AbstractEntity-class.html#get_coordinates
csb.bio.structure.Ensemble._abc_negative_cache_version	csb.bio.structure.Ensemble-class.html#_abc_negative_cache_version
csb.bio.structure.Ensemble.__repr__	csb.bio.structure.Ensemble-class.html#__repr__
csb.bio.structure.AbstractEntity.components	csb.bio.structure.AbstractEntity-class.html#components
csb.bio.structure.Ensemble.first_model	csb.bio.structure.Ensemble-class.html#first_model
csb.core.AbstractContainer._abc_registry	csb.core.AbstractContainer-class.html#_abc_registry
csb.bio.structure.EnsembleModelsCollection	csb.bio.structure.EnsembleModelsCollection-class.html
csb.bio.structure.EnsembleModelsCollection._exception	csb.bio.structure.EnsembleModelsCollection-class.html#_exception
csb.core.CollectionContainer._update	csb.core.CollectionContainer-class.html#_update
csb.core.BaseCollectionContainer.last_index	csb.core.BaseCollectionContainer-class.html#last_index
csb.bio.structure.EnsembleModelsCollection.__init__	csb.bio.structure.EnsembleModelsCollection-class.html#__init__
csb.core.BaseCollectionContainer.__contains__	csb.core.BaseCollectionContainer-class.html#__contains__
csb.core.BaseCollectionContainer._getinternal	csb.core.BaseCollectionContainer-class.html#_getinternal
csb.bio.structure.EnsembleModelsCollection.append	csb.bio.structure.EnsembleModelsCollection-class.html#append
csb.core.BaseCollectionContainer._update_items	csb.core.BaseCollectionContainer-class.html#_update_items
csb.core.BaseCollectionContainer.__len__	csb.core.BaseCollectionContainer-class.html#__len__
csb.core.BaseCollectionContainer.__getitem__	csb.core.BaseCollectionContainer-class.html#__getitem__
csb.core.BaseCollectionContainer.__iter__	csb.core.BaseCollectionContainer-class.html#__iter__
csb.core.BaseCollectionContainer.__bool__	csb.core.BaseCollectionContainer-class.html#__bool__
csb.core.BaseCollectionContainer.start_index	csb.core.BaseCollectionContainer-class.html#start_index
csb.core.BaseCollectionContainer._append_item	csb.core.BaseCollectionContainer-class.html#_append_item
csb.core.BaseCollectionContainer.__nonzero__	csb.core.BaseCollectionContainer-class.html#__nonzero__
csb.core.BaseCollectionContainer._sort	csb.core.BaseCollectionContainer-class.html#_sort
csb.core.BaseCollectionContainer.length	csb.core.BaseCollectionContainer-class.html#length
csb.core.BaseCollectionContainer.__repr__	csb.core.BaseCollectionContainer-class.html#__repr__
csb.bio.structure.EntityIndexError	csb.bio.structure.EntityIndexError-class.html
csb.bio.structure.EntityNotFoundError	csb.bio.structure.EntityNotFoundError-class.html
csb.bio.structure.InvalidOperation	csb.bio.structure.InvalidOperation-class.html
csb.bio.structure.Missing3DStructureError	csb.bio.structure.Missing3DStructureError-class.html
csb.bio.structure.NucleicResidue	csb.bio.structure.NucleicResidue-class.html
csb.core.AbstractContainer.__metaclass__	abc.ABCMeta-class.html
csb.bio.structure.Residue._children	csb.bio.structure.Residue-class.html#_children
csb.core.AbstractContainer._abc_negative_cache	csb.core.AbstractContainer-class.html#_abc_negative_cache
csb.bio.structure.Residue.rank	csb.bio.structure.Residue-class.html#rank
csb.bio.structure.Residue.id	csb.bio.structure.Residue-class.html#id
csb.bio.structure.NucleicResidue.__init__	csb.bio.structure.NucleicResidue-class.html#__init__
csb.bio.structure.Residue.torsion	csb.bio.structure.Residue-class.html#torsion
csb.core.AbstractContainer._abc_cache	csb.core.AbstractContainer-class.html#_abc_cache
csb.bio.structure.Residue.create	csb.bio.structure.Residue-class.html#create
csb.bio.structure.Residue.__abstractmethods__	csb.bio.structure.Residue-class.html#__abstractmethods__
csb.bio.structure.AbstractEntity.transform	csb.bio.structure.AbstractEntity-class.html#transform
csb.bio.structure.Residue.label	csb.bio.structure.Residue-class.html#label
csb.bio.structure.Residue.type	csb.bio.structure.Residue-class.html#type
csb.core.AbstractContainer.__len__	csb.core.AbstractContainer-class.html#__len__
csb.core.AbstractNIContainer.__getitem__	csb.core.AbstractNIContainer-class.html#__getitem__
csb.bio.structure.Residue.clone	csb.bio.structure.Residue-class.html#clone
csb.bio.structure.NucleicResidue.is_modified	csb.bio.structure.NucleicResidue-class.html#is_modified
csb.bio.structure.Residue.atoms	csb.bio.structure.Residue-class.html#atoms
csb.core.AbstractContainer.__iter__	csb.core.AbstractContainer-class.html#__iter__
csb.bio.structure.Residue.secondary_structure	csb.bio.structure.Residue-class.html#secondary_structure
csb.core.AbstractContainer.__bool__	csb.core.AbstractContainer-class.html#__bool__
csb.bio.structure.Residue.insertion_code	csb.bio.structure.Residue-class.html#insertion_code
csb.core.AbstractContainer.__nonzero__	csb.core.AbstractContainer-class.html#__nonzero__
csb.bio.structure.Residue.items	csb.bio.structure.Residue-class.html#items
csb.bio.structure.Residue.get_coordinates	csb.bio.structure.Residue-class.html#get_coordinates
csb.bio.structure.Residue._abc_negative_cache_version	csb.bio.structure.Residue-class.html#_abc_negative_cache_version
csb.bio.structure.Residue.__repr__	csb.bio.structure.Residue-class.html#__repr__
csb.bio.structure.AbstractEntity.components	csb.bio.structure.AbstractEntity-class.html#components
csb.core.AbstractContainer._abc_registry	csb.core.AbstractContainer-class.html#_abc_registry
csb.bio.structure.Residue.sequence_number	csb.bio.structure.Residue-class.html#sequence_number
csb.bio.structure.Residue.has_structure	csb.bio.structure.Residue-class.html#has_structure
csb.bio.structure.ProteinResidue	csb.bio.structure.ProteinResidue-class.html
csb.core.AbstractContainer.__metaclass__	abc.ABCMeta-class.html
csb.bio.structure.Residue._children	csb.bio.structure.Residue-class.html#_children
csb.core.AbstractContainer._abc_negative_cache	csb.core.AbstractContainer-class.html#_abc_negative_cache
csb.bio.structure.Residue.rank	csb.bio.structure.Residue-class.html#rank
csb.bio.structure.ProteinResidue.compute_torsion	csb.bio.structure.ProteinResidue-class.html#compute_torsion
csb.bio.structure.Residue.id	csb.bio.structure.Residue-class.html#id
csb.bio.structure.ProteinResidue.__init__	csb.bio.structure.ProteinResidue-class.html#__init__
csb.bio.structure.Residue.torsion	csb.bio.structure.Residue-class.html#torsion
csb.core.AbstractContainer._abc_cache	csb.core.AbstractContainer-class.html#_abc_cache
csb.bio.structure.Residue.create	csb.bio.structure.Residue-class.html#create
csb.bio.structure.Residue.__abstractmethods__	csb.bio.structure.Residue-class.html#__abstractmethods__
csb.bio.structure.AbstractEntity.transform	csb.bio.structure.AbstractEntity-class.html#transform
csb.bio.structure.Residue.label	csb.bio.structure.Residue-class.html#label
csb.bio.structure.Residue.type	csb.bio.structure.Residue-class.html#type
csb.core.AbstractContainer.__len__	csb.core.AbstractContainer-class.html#__len__
csb.core.AbstractNIContainer.__getitem__	csb.core.AbstractNIContainer-class.html#__getitem__
csb.bio.structure.Residue.clone	csb.bio.structure.Residue-class.html#clone
csb.bio.structure.Residue.is_modified	csb.bio.structure.Residue-class.html#is_modified
csb.bio.structure.Residue.atoms	csb.bio.structure.Residue-class.html#atoms
csb.core.AbstractContainer.__iter__	csb.core.AbstractContainer-class.html#__iter__
csb.bio.structure.Residue.secondary_structure	csb.bio.structure.Residue-class.html#secondary_structure
csb.core.AbstractContainer.__bool__	csb.core.AbstractContainer-class.html#__bool__
csb.bio.structure.Residue.insertion_code	csb.bio.structure.Residue-class.html#insertion_code
csb.core.AbstractContainer.__nonzero__	csb.core.AbstractContainer-class.html#__nonzero__
csb.bio.structure.Residue.items	csb.bio.structure.Residue-class.html#items
csb.bio.structure.Residue.get_coordinates	csb.bio.structure.Residue-class.html#get_coordinates
csb.bio.structure.Residue._abc_negative_cache_version	csb.bio.structure.Residue-class.html#_abc_negative_cache_version
csb.bio.structure.Residue.__repr__	csb.bio.structure.Residue-class.html#__repr__
csb.bio.structure.AbstractEntity.components	csb.bio.structure.AbstractEntity-class.html#components
csb.core.AbstractContainer._abc_registry	csb.core.AbstractContainer-class.html#_abc_registry
csb.bio.structure.Residue.sequence_number	csb.bio.structure.Residue-class.html#sequence_number
csb.bio.structure.Residue.has_structure	csb.bio.structure.Residue-class.html#has_structure
csb.bio.structure.Residue	csb.bio.structure.Residue-class.html
csb.core.AbstractContainer.__metaclass__	abc.ABCMeta-class.html
csb.bio.structure.Residue._children	csb.bio.structure.Residue-class.html#_children
csb.core.AbstractContainer._abc_negative_cache	csb.core.AbstractContainer-class.html#_abc_negative_cache
csb.bio.structure.Residue.rank	csb.bio.structure.Residue-class.html#rank
csb.bio.structure.Residue.id	csb.bio.structure.Residue-class.html#id
csb.bio.structure.Residue.__init__	csb.bio.structure.Residue-class.html#__init__
csb.bio.structure.Residue.torsion	csb.bio.structure.Residue-class.html#torsion
csb.core.AbstractContainer._abc_cache	csb.core.AbstractContainer-class.html#_abc_cache
csb.bio.structure.Residue.create	csb.bio.structure.Residue-class.html#create
csb.bio.structure.Residue.__abstractmethods__	csb.bio.structure.Residue-class.html#__abstractmethods__
csb.bio.structure.AbstractEntity.transform	csb.bio.structure.AbstractEntity-class.html#transform
csb.bio.structure.Residue.label	csb.bio.structure.Residue-class.html#label
csb.bio.structure.Residue.type	csb.bio.structure.Residue-class.html#type
csb.core.AbstractContainer.__len__	csb.core.AbstractContainer-class.html#__len__
csb.core.AbstractNIContainer.__getitem__	csb.core.AbstractNIContainer-class.html#__getitem__
csb.bio.structure.Residue.clone	csb.bio.structure.Residue-class.html#clone
csb.bio.structure.Residue.is_modified	csb.bio.structure.Residue-class.html#is_modified
csb.bio.structure.Residue.atoms	csb.bio.structure.Residue-class.html#atoms
csb.core.AbstractContainer.__iter__	csb.core.AbstractContainer-class.html#__iter__
csb.bio.structure.Residue.secondary_structure	csb.bio.structure.Residue-class.html#secondary_structure
csb.core.AbstractContainer.__bool__	csb.core.AbstractContainer-class.html#__bool__
csb.bio.structure.Residue.insertion_code	csb.bio.structure.Residue-class.html#insertion_code
csb.core.AbstractContainer.__nonzero__	csb.core.AbstractContainer-class.html#__nonzero__
csb.bio.structure.Residue.items	csb.bio.structure.Residue-class.html#items
csb.bio.structure.Residue.get_coordinates	csb.bio.structure.Residue-class.html#get_coordinates
csb.bio.structure.Residue._abc_negative_cache_version	csb.bio.structure.Residue-class.html#_abc_negative_cache_version
csb.bio.structure.Residue.__repr__	csb.bio.structure.Residue-class.html#__repr__
csb.bio.structure.AbstractEntity.components	csb.bio.structure.AbstractEntity-class.html#components
csb.core.AbstractContainer._abc_registry	csb.core.AbstractContainer-class.html#_abc_registry
csb.bio.structure.Residue.sequence_number	csb.bio.structure.Residue-class.html#sequence_number
csb.bio.structure.Residue.has_structure	csb.bio.structure.Residue-class.html#has_structure
csb.bio.structure.ResidueAtomsTable	csb.bio.structure.ResidueAtomsTable-class.html
csb.bio.structure.ResidueAtomsTable._exception	csb.bio.structure.ResidueAtomsTable-class.html#_exception
csb.core.DictionaryContainer._update	csb.core.DictionaryContainer-class.html#_update
csb.bio.structure.ResidueAtomsTable.append	csb.bio.structure.ResidueAtomsTable-class.html#append
csb.core.BaseDictionaryContainer.__contains__	csb.core.BaseDictionaryContainer-class.html#__contains__
csb.core.BaseDictionaryContainer._getinternal	csb.core.BaseDictionaryContainer-class.html#_getinternal
csb.core.DictionaryContainer._remove	csb.core.DictionaryContainer-class.html#_remove
csb.bio.structure.ResidueAtomsTable.__init__	csb.bio.structure.ResidueAtomsTable-class.html#__init__
csb.core.BaseDictionaryContainer._set_items	csb.core.BaseDictionaryContainer-class.html#_set_items
csb.core.BaseDictionaryContainer._update_items	csb.core.BaseDictionaryContainer-class.html#_update_items
csb.core.BaseDictionaryContainer.__len__	csb.core.BaseDictionaryContainer-class.html#__len__
csb.core.BaseDictionaryContainer.__getitem__	csb.core.BaseDictionaryContainer-class.html#__getitem__
csb.core.BaseDictionaryContainer.keys	csb.core.BaseDictionaryContainer-class.html#keys
csb.bio.structure.ResidueAtomsTable.update	csb.bio.structure.ResidueAtomsTable-class.html#update
csb.core.BaseDictionaryContainer.__iter__	csb.core.BaseDictionaryContainer-class.html#__iter__
csb.core.BaseDictionaryContainer.__bool__	csb.core.BaseDictionaryContainer-class.html#__bool__
csb.core.BaseDictionaryContainer._append_item	csb.core.BaseDictionaryContainer-class.html#_append_item
csb.core.BaseDictionaryContainer.__nonzero__	csb.core.BaseDictionaryContainer-class.html#__nonzero__
csb.core.BaseDictionaryContainer.length	csb.core.BaseDictionaryContainer-class.html#length
csb.core.BaseDictionaryContainer._remove_item	csb.core.BaseDictionaryContainer-class.html#_remove_item
csb.bio.structure.ResidueAtomsTable.__repr__	csb.bio.structure.ResidueAtomsTable-class.html#__repr__
csb.core.DictionaryContainer._set	csb.core.DictionaryContainer-class.html#_set
csb.bio.structure.SecStructures	csb.bio.structure.SecStructures-class.html
csb.bio.structure.SecStructures.Helix3	csb.bio.structure.SecStructures-class.html#Helix3
csb.bio.structure.SecStructures.BetaBridge	csb.bio.structure.SecStructures-class.html#BetaBridge
csb.bio.structure.SecStructures.Helix	csb.bio.structure.SecStructures-class.html#Helix
csb.core.enum.__init__	csb.core.enum-class.html#__init__
csb.bio.structure.SecStructures._namesci	csb.bio.structure.SecStructures-class.html#_namesci
csb.bio.structure.SecStructures.Gap	csb.bio.structure.SecStructures-class.html#Gap
csb.bio.structure.SecStructures._valuesci	csb.bio.structure.SecStructures-class.html#_valuesci
csb.bio.structure.SecStructures.Coil	csb.bio.structure.SecStructures-class.html#Coil
csb.bio.structure.SecStructures.Strand	csb.bio.structure.SecStructures-class.html#Strand
csb.bio.structure.SecStructures.PiHelix	csb.bio.structure.SecStructures-class.html#PiHelix
csb.bio.structure.SecStructures._names	csb.bio.structure.SecStructures-class.html#_names
csb.bio.structure.SecStructures.Turn	csb.bio.structure.SecStructures-class.html#Turn
csb.bio.structure.SecStructures._name	csb.bio.structure.SecStructures-class.html#_name
csb.bio.structure.SecStructures.Bend	csb.bio.structure.SecStructures-class.html#Bend
csb.bio.structure.SecStructures._values	csb.bio.structure.SecStructures-class.html#_values
csb.bio.structure.SecondaryStructure	csb.bio.structure.SecondaryStructure-class.html
csb.core.BaseCollectionContainer._exception	csb.core.BaseCollectionContainer-class.html#_exception
csb.core.CollectionContainer._update	csb.core.CollectionContainer-class.html#_update
csb.bio.structure.SecondaryStructure.to_three_state	csb.bio.structure.SecondaryStructure-class.html#to_three_state
csb.bio.structure.SecondaryStructure.scan	csb.bio.structure.SecondaryStructure-class.html#scan
csb.bio.structure.SecondaryStructure.__str__	csb.bio.structure.SecondaryStructure-class.html#__str__
csb.core.BaseCollectionContainer.last_index	csb.core.BaseCollectionContainer-class.html#last_index
csb.bio.structure.SecondaryStructure.parse	csb.bio.structure.SecondaryStructure-class.html#parse
csb.bio.structure.SecondaryStructure.subregion	csb.bio.structure.SecondaryStructure-class.html#subregion
csb.bio.structure.SecondaryStructure.at	csb.bio.structure.SecondaryStructure-class.html#at
csb.bio.structure.SecondaryStructure.__init__	csb.bio.structure.SecondaryStructure-class.html#__init__
csb.bio.structure.SecondaryStructure.q3	csb.bio.structure.SecondaryStructure-class.html#q3
csb.bio.structure.SecondaryStructure.end	csb.bio.structure.SecondaryStructure-class.html#end
csb.core.BaseCollectionContainer.__contains__	csb.core.BaseCollectionContainer-class.html#__contains__
csb.core.BaseCollectionContainer._getinternal	csb.core.BaseCollectionContainer-class.html#_getinternal
csb.bio.structure.SecondaryStructure.start	csb.bio.structure.SecondaryStructure-class.html#start
csb.bio.structure.SecondaryStructure.append	csb.bio.structure.SecondaryStructure-class.html#append
csb.core.BaseCollectionContainer._update_items	csb.core.BaseCollectionContainer-class.html#_update_items
csb.core.BaseCollectionContainer.__len__	csb.core.BaseCollectionContainer-class.html#__len__
csb.core.BaseCollectionContainer.__getitem__	csb.core.BaseCollectionContainer-class.html#__getitem__
csb.bio.structure.SecondaryStructure.clone	csb.bio.structure.SecondaryStructure-class.html#clone
csb.core.BaseCollectionContainer.__iter__	csb.core.BaseCollectionContainer-class.html#__iter__
csb.core.BaseCollectionContainer.__bool__	csb.core.BaseCollectionContainer-class.html#__bool__
csb.core.BaseCollectionContainer.start_index	csb.core.BaseCollectionContainer-class.html#start_index
csb.core.BaseCollectionContainer._append_item	csb.core.BaseCollectionContainer-class.html#_append_item
csb.core.BaseCollectionContainer.__nonzero__	csb.core.BaseCollectionContainer-class.html#__nonzero__
csb.core.BaseCollectionContainer._sort	csb.core.BaseCollectionContainer-class.html#_sort
csb.bio.structure.SecondaryStructure.to_string	csb.bio.structure.SecondaryStructure-class.html#to_string
csb.core.BaseCollectionContainer.length	csb.core.BaseCollectionContainer-class.html#length
csb.core.BaseCollectionContainer.__repr__	csb.core.BaseCollectionContainer-class.html#__repr__
csb.bio.structure.SecondaryStructureElement	csb.bio.structure.SecondaryStructureElement-class.html
csb.bio.structure.SecondaryStructureElement.__str__	csb.bio.structure.SecondaryStructureElement-class.html#__str__
csb.bio.structure.SecondaryStructureElement.__lt__	csb.bio.structure.SecondaryStructureElement-class.html#__lt__
csb.bio.structure.SecondaryStructureElement.__init__	csb.bio.structure.SecondaryStructureElement-class.html#__init__
csb.bio.structure.SecondaryStructureElement.end	csb.bio.structure.SecondaryStructureElement-class.html#end
csb.bio.structure.SecondaryStructureElement.merge	csb.bio.structure.SecondaryStructureElement-class.html#merge
csb.bio.structure.SecondaryStructureElement.start	csb.bio.structure.SecondaryStructureElement-class.html#start
csb.bio.structure.SecondaryStructureElement.score	csb.bio.structure.SecondaryStructureElement-class.html#score
csb.bio.structure.SecondaryStructureElement.type	csb.bio.structure.SecondaryStructureElement-class.html#type
csb.bio.structure.SecondaryStructureElement.overlaps	csb.bio.structure.SecondaryStructureElement-class.html#overlaps
csb.bio.structure.SecondaryStructureElement.simplify	csb.bio.structure.SecondaryStructureElement-class.html#simplify
csb.bio.structure.SecondaryStructureElement.__eq__	csb.bio.structure.SecondaryStructureElement-class.html#__eq__
csb.bio.structure.SecondaryStructureElement.to_string	csb.bio.structure.SecondaryStructureElement-class.html#to_string
csb.bio.structure.SecondaryStructureElement.length	csb.bio.structure.SecondaryStructureElement-class.html#length
csb.bio.structure.SecondaryStructureElement.__repr__	csb.bio.structure.SecondaryStructureElement-class.html#__repr__
csb.bio.structure.Structure	csb.bio.structure.Structure-class.html
csb.bio.structure.Structure.from_chain	csb.bio.structure.Structure-class.html#from_chain
csb.bio.structure.Structure.to_fasta	csb.bio.structure.Structure-class.html#to_fasta
csb.core.AbstractContainer.__metaclass__	abc.ABCMeta-class.html
csb.bio.structure.Structure._children	csb.bio.structure.Structure-class.html#_children
csb.core.AbstractContainer._abc_negative_cache	csb.core.AbstractContainer-class.html#_abc_negative_cache
csb.bio.structure.Structure.accession	csb.bio.structure.Structure-class.html#accession
csb.bio.structure.Structure.__init__	csb.bio.structure.Structure-class.html#__init__
csb.core.AbstractContainer._abc_cache	csb.core.AbstractContainer-class.html#_abc_cache
csb.bio.structure.Structure.to_pdb	csb.bio.structure.Structure-class.html#to_pdb
csb.bio.structure.Structure.__abstractmethods__	csb.bio.structure.Structure-class.html#__abstractmethods__
csb.bio.structure.AbstractEntity.transform	csb.bio.structure.AbstractEntity-class.html#transform
csb.bio.structure.AbstractEntity.get_coordinates	csb.bio.structure.AbstractEntity-class.html#get_coordinates
csb.bio.structure.Structure.chains	csb.bio.structure.Structure-class.html#chains
csb.core.AbstractContainer.__len__	csb.core.AbstractContainer-class.html#__len__
csb.bio.structure.Structure.model_id	csb.bio.structure.Structure-class.html#model_id
csb.core.AbstractNIContainer.__getitem__	csb.core.AbstractNIContainer-class.html#__getitem__
csb.core.AbstractContainer.__iter__	csb.core.AbstractContainer-class.html#__iter__
csb.core.AbstractContainer.__bool__	csb.core.AbstractContainer-class.html#__bool__
csb.core.AbstractContainer.__nonzero__	csb.core.AbstractContainer-class.html#__nonzero__
csb.bio.structure.Structure.items	csb.bio.structure.Structure-class.html#items
csb.core.AbstractContainer._abc_registry	csb.core.AbstractContainer-class.html#_abc_registry
csb.bio.structure.Structure.first_chain	csb.bio.structure.Structure-class.html#first_chain
csb.bio.structure.Structure._abc_negative_cache_version	csb.bio.structure.Structure-class.html#_abc_negative_cache_version
csb.bio.structure.Structure.__repr__	csb.bio.structure.Structure-class.html#__repr__
csb.bio.structure.AbstractEntity.components	csb.bio.structure.AbstractEntity-class.html#components
csb.bio.structure.Structure.resolution	csb.bio.structure.Structure-class.html#resolution
csb.bio.structure.StructureChainsTable	csb.bio.structure.StructureChainsTable-class.html
csb.bio.structure.StructureChainsTable._exception	csb.bio.structure.StructureChainsTable-class.html#_exception
csb.core.DictionaryContainer._update	csb.core.DictionaryContainer-class.html#_update
csb.bio.structure.StructureChainsTable._update_chain_id	csb.bio.structure.StructureChainsTable-class.html#_update_chain_id
csb.bio.structure.StructureChainsTable.__init__	csb.bio.structure.StructureChainsTable-class.html#__init__
csb.core.BaseDictionaryContainer.__contains__	csb.core.BaseDictionaryContainer-class.html#__contains__
csb.core.BaseDictionaryContainer._getinternal	csb.core.BaseDictionaryContainer-class.html#_getinternal
csb.core.DictionaryContainer._remove	csb.core.DictionaryContainer-class.html#_remove
csb.bio.structure.StructureChainsTable.append	csb.bio.structure.StructureChainsTable-class.html#append
csb.core.BaseDictionaryContainer._set_items	csb.core.BaseDictionaryContainer-class.html#_set_items
csb.core.BaseDictionaryContainer._update_items	csb.core.BaseDictionaryContainer-class.html#_update_items
csb.core.BaseDictionaryContainer.__len__	csb.core.BaseDictionaryContainer-class.html#__len__
csb.core.BaseDictionaryContainer.__getitem__	csb.core.BaseDictionaryContainer-class.html#__getitem__
csb.core.BaseDictionaryContainer.keys	csb.core.BaseDictionaryContainer-class.html#keys
csb.core.BaseDictionaryContainer.__iter__	csb.core.BaseDictionaryContainer-class.html#__iter__
csb.core.BaseDictionaryContainer.__bool__	csb.core.BaseDictionaryContainer-class.html#__bool__
csb.core.BaseDictionaryContainer._append_item	csb.core.BaseDictionaryContainer-class.html#_append_item
csb.core.BaseDictionaryContainer.__nonzero__	csb.core.BaseDictionaryContainer-class.html#__nonzero__
csb.bio.structure.StructureChainsTable.remove	csb.bio.structure.StructureChainsTable-class.html#remove
csb.core.BaseDictionaryContainer.length	csb.core.BaseDictionaryContainer-class.html#length
csb.core.BaseDictionaryContainer._remove_item	csb.core.BaseDictionaryContainer-class.html#_remove_item
csb.bio.structure.StructureChainsTable.__repr__	csb.bio.structure.StructureChainsTable-class.html#__repr__
csb.core.DictionaryContainer._set	csb.core.DictionaryContainer-class.html#_set
csb.bio.structure.SuperimposeInfo	csb.bio.structure.SuperimposeInfo-class.html
csb.bio.structure.SuperimposeInfo.__init__	csb.bio.structure.SuperimposeInfo-class.html#__init__
csb.bio.structure.TorsionAngles	csb.bio.structure.TorsionAngles-class.html
csb.bio.structure.TorsionAngles.rad	csb.bio.structure.TorsionAngles-class.html#rad
csb.bio.structure.TorsionAngles.to_degrees	csb.bio.structure.TorsionAngles-class.html#to_degrees
csb.bio.structure.TorsionAngles.check_angle	csb.bio.structure.TorsionAngles-class.html#check_angle
csb.bio.structure.TorsionAngles.__init__	csb.bio.structure.TorsionAngles-class.html#__init__
csb.bio.structure.TorsionAngles.to_radians	csb.bio.structure.TorsionAngles-class.html#to_radians
csb.bio.structure.TorsionAngles.units	csb.bio.structure.TorsionAngles-class.html#units
csb.bio.structure.TorsionAngles.phi	csb.bio.structure.TorsionAngles-class.html#phi
csb.bio.structure.TorsionAngles.psi	csb.bio.structure.TorsionAngles-class.html#psi
csb.bio.structure.TorsionAngles.__bool__	csb.bio.structure.TorsionAngles-class.html#__bool__
csb.bio.structure.TorsionAngles.copy	csb.bio.structure.TorsionAngles-class.html#copy
csb.bio.structure.TorsionAngles.omega	csb.bio.structure.TorsionAngles-class.html#omega
csb.bio.structure.TorsionAngles.__nonzero__	csb.bio.structure.TorsionAngles-class.html#__nonzero__
csb.bio.structure.TorsionAngles.__repr__	csb.bio.structure.TorsionAngles-class.html#__repr__
csb.bio.structure.TorsionAngles.deg	csb.bio.structure.TorsionAngles-class.html#deg
csb.bio.structure.TorsionAnglesCollection	csb.bio.structure.TorsionAnglesCollection-class.html
csb.core.BaseCollectionContainer._exception	csb.core.BaseCollectionContainer-class.html#_exception
csb.core.CollectionContainer._update	csb.core.CollectionContainer-class.html#_update
csb.core.BaseCollectionContainer.last_index	csb.core.BaseCollectionContainer-class.html#last_index
csb.core.CollectionContainer.append	csb.core.CollectionContainer-class.html#append
csb.core.BaseCollectionContainer.__contains__	csb.core.BaseCollectionContainer-class.html#__contains__
csb.core.BaseCollectionContainer._getinternal	csb.core.BaseCollectionContainer-class.html#_getinternal
csb.bio.structure.TorsionAnglesCollection.__init__	csb.bio.structure.TorsionAnglesCollection-class.html#__init__
csb.core.BaseCollectionContainer._update_items	csb.core.BaseCollectionContainer-class.html#_update_items
csb.core.BaseCollectionContainer.__len__	csb.core.BaseCollectionContainer-class.html#__len__
csb.bio.structure.TorsionAnglesCollection.phi	csb.bio.structure.TorsionAnglesCollection-class.html#phi
csb.bio.structure.TorsionAnglesCollection.psi	csb.bio.structure.TorsionAnglesCollection-class.html#psi
csb.core.BaseCollectionContainer.__getitem__	csb.core.BaseCollectionContainer-class.html#__getitem__
csb.bio.structure.TorsionAnglesCollection.update	csb.bio.structure.TorsionAnglesCollection-class.html#update
csb.core.BaseCollectionContainer.__iter__	csb.core.BaseCollectionContainer-class.html#__iter__
csb.core.BaseCollectionContainer.__bool__	csb.core.BaseCollectionContainer-class.html#__bool__
csb.bio.structure.TorsionAnglesCollection.omega	csb.bio.structure.TorsionAnglesCollection-class.html#omega
csb.core.BaseCollectionContainer.start_index	csb.core.BaseCollectionContainer-class.html#start_index
csb.core.BaseCollectionContainer._append_item	csb.core.BaseCollectionContainer-class.html#_append_item
csb.core.BaseCollectionContainer.__nonzero__	csb.core.BaseCollectionContainer-class.html#__nonzero__
csb.core.BaseCollectionContainer._sort	csb.core.BaseCollectionContainer-class.html#_sort
csb.bio.structure.TorsionAnglesCollection.rmsd	csb.bio.structure.TorsionAnglesCollection-class.html#rmsd
csb.core.BaseCollectionContainer.length	csb.core.BaseCollectionContainer-class.html#length
csb.bio.structure.TorsionAnglesCollection.__repr__	csb.bio.structure.TorsionAnglesCollection-class.html#__repr__
csb.bio.structure.UnknownResidue	csb.bio.structure.UnknownResidue-class.html
csb.core.AbstractContainer.__metaclass__	abc.ABCMeta-class.html
csb.bio.structure.Residue._children	csb.bio.structure.Residue-class.html#_children
csb.core.AbstractContainer._abc_negative_cache	csb.core.AbstractContainer-class.html#_abc_negative_cache
csb.bio.structure.Residue.rank	csb.bio.structure.Residue-class.html#rank
csb.bio.structure.Residue.id	csb.bio.structure.Residue-class.html#id
csb.bio.structure.UnknownResidue.__init__	csb.bio.structure.UnknownResidue-class.html#__init__
csb.bio.structure.Residue.torsion	csb.bio.structure.Residue-class.html#torsion
csb.core.AbstractContainer._abc_cache	csb.core.AbstractContainer-class.html#_abc_cache
csb.bio.structure.Residue.create	csb.bio.structure.Residue-class.html#create
csb.bio.structure.Residue.__abstractmethods__	csb.bio.structure.Residue-class.html#__abstractmethods__
csb.bio.structure.AbstractEntity.transform	csb.bio.structure.AbstractEntity-class.html#transform
csb.bio.structure.Residue.label	csb.bio.structure.Residue-class.html#label
csb.bio.structure.Residue.type	csb.bio.structure.Residue-class.html#type
csb.core.AbstractContainer.__len__	csb.core.AbstractContainer-class.html#__len__
csb.core.AbstractNIContainer.__getitem__	csb.core.AbstractNIContainer-class.html#__getitem__
csb.bio.structure.Residue.clone	csb.bio.structure.Residue-class.html#clone
csb.bio.structure.Residue.is_modified	csb.bio.structure.Residue-class.html#is_modified
csb.bio.structure.Residue.atoms	csb.bio.structure.Residue-class.html#atoms
csb.core.AbstractContainer.__iter__	csb.core.AbstractContainer-class.html#__iter__
csb.bio.structure.Residue.secondary_structure	csb.bio.structure.Residue-class.html#secondary_structure
csb.core.AbstractContainer.__bool__	csb.core.AbstractContainer-class.html#__bool__
csb.bio.structure.Residue.insertion_code	csb.bio.structure.Residue-class.html#insertion_code
csb.core.AbstractContainer.__nonzero__	csb.core.AbstractContainer-class.html#__nonzero__
csb.bio.structure.Residue.items	csb.bio.structure.Residue-class.html#items
csb.bio.structure.Residue.get_coordinates	csb.bio.structure.Residue-class.html#get_coordinates
csb.bio.structure.Residue._abc_negative_cache_version	csb.bio.structure.Residue-class.html#_abc_negative_cache_version
csb.bio.structure.Residue.__repr__	csb.bio.structure.Residue-class.html#__repr__
csb.bio.structure.AbstractEntity.components	csb.bio.structure.AbstractEntity-class.html#components
csb.core.AbstractContainer._abc_registry	csb.core.AbstractContainer-class.html#_abc_registry
csb.bio.structure.Residue.sequence_number	csb.bio.structure.Residue-class.html#sequence_number
csb.bio.structure.Residue.has_structure	csb.bio.structure.Residue-class.html#has_structure
csb.bio.structure.UnknownSecStructureError	csb.bio.structure.UnknownSecStructureError-class.html
csb.build.BuildTypes	csb.build.BuildTypes-class.html
csb.build.BuildTypes.BINARY	csb.build.BuildTypes-class.html#BINARY
csb.build.BuildTypes.get	csb.build.BuildTypes-class.html#get
csb.build.BuildTypes.SOURCE	csb.build.BuildTypes-class.html#SOURCE
csb.build.BuildTypes._du	csb.build.BuildTypes-class.html#_du
csb.build.Console	csb.build.Console-class.html
csb.build.Console._test	csb.build.Console-class.html#_test
csb.build.Console.USAGE	csb.build.Console-class.html#USAGE
csb.build.Console.PROGRAM	csb.build.Console-class.html#PROGRAM
csb.build.Console.__init__	csb.build.Console-class.html#__init__
csb.build.Console.log	csb.build.Console-class.html#log
csb.build.Console.exit	csb.build.Console-class.html#exit
csb.build.Console.build	csb.build.Console-class.html#build
csb.build.Console.input	csb.build.Console-class.html#input
csb.build.Console._compile	csb.build.Console-class.html#_compile
csb.build.Console._init	csb.build.Console-class.html#_init
csb.build.Console.run	csb.build.Console-class.html#run
csb.build.Console._revision	csb.build.Console-class.html#_revision
csb.build.Console.output	csb.build.Console-class.html#output
csb.build.Console._strip_source	csb.build.Console-class.html#_strip_source
csb.build.Console.verbosity	csb.build.Console-class.html#verbosity
csb.build.Console._doc	csb.build.Console-class.html#_doc
csb.build.Console._package	csb.build.Console-class.html#_package
csb.build.MercurialHandler	csb.build.MercurialHandler-class.html
csb.build.RevisionHandler._run	csb.build.RevisionHandler-class.html#_run
csb.build.MercurialHandler.read	csb.build.MercurialHandler-class.html#read
csb.build.RevisionHandler._delcache	csb.build.RevisionHandler-class.html#_delcache
csb.build.RevisionHandler.write	csb.build.RevisionHandler-class.html#write
csb.build.RevisionHandler.sc	csb.build.RevisionHandler-class.html#sc
csb.build.RevisionHandler.path	csb.build.RevisionHandler-class.html#path
csb.build.MercurialHandler.__init__	csb.build.MercurialHandler-class.html#__init__
csb.build.RevisionError	csb.build.RevisionError-class.html
csb.build.RevisionError.__init__	csb.build.RevisionError-class.html#__init__
csb.build.RevisionHandler	csb.build.RevisionHandler-class.html
csb.build.RevisionHandler._run	csb.build.RevisionHandler-class.html#_run
csb.build.RevisionHandler.read	csb.build.RevisionHandler-class.html#read
csb.build.RevisionHandler._delcache	csb.build.RevisionHandler-class.html#_delcache
csb.build.RevisionHandler.write	csb.build.RevisionHandler-class.html#write
csb.build.RevisionHandler.sc	csb.build.RevisionHandler-class.html#sc
csb.build.RevisionHandler.path	csb.build.RevisionHandler-class.html#path
csb.build.RevisionHandler.__init__	csb.build.RevisionHandler-class.html#__init__
csb.build.RevisionInfo	csb.build.RevisionInfo-class.html
csb.build.RevisionInfo.__init__	csb.build.RevisionInfo-class.html#__init__
csb.build.SubversionHandler	csb.build.SubversionHandler-class.html
csb.build.RevisionHandler._run	csb.build.RevisionHandler-class.html#_run
csb.build.SubversionHandler.read	csb.build.SubversionHandler-class.html#read
csb.build.RevisionHandler._delcache	csb.build.RevisionHandler-class.html#_delcache
csb.build.RevisionHandler.write	csb.build.RevisionHandler-class.html#write
csb.build.RevisionHandler.sc	csb.build.RevisionHandler-class.html#sc
csb.build.RevisionHandler.path	csb.build.RevisionHandler-class.html#path
csb.build.SubversionHandler.__init__	csb.build.SubversionHandler-class.html#__init__
csb.core.AbstractContainer	csb.core.AbstractContainer-class.html
csb.core.AbstractContainer.__metaclass__	abc.ABCMeta-class.html
csb.core.AbstractContainer._children	csb.core.AbstractContainer-class.html#_children
csb.core.AbstractContainer._abc_negative_cache	csb.core.AbstractContainer-class.html#_abc_negative_cache
csb.core.AbstractContainer._abc_cache	csb.core.AbstractContainer-class.html#_abc_cache
csb.core.AbstractContainer.__abstractmethods__	csb.core.AbstractContainer-class.html#__abstractmethods__
csb.core.AbstractContainer.__len__	csb.core.AbstractContainer-class.html#__len__
csb.core.AbstractContainer.__getitem__	csb.core.AbstractContainer-class.html#__getitem__
csb.core.AbstractContainer.__iter__	csb.core.AbstractContainer-class.html#__iter__
csb.core.AbstractContainer.__bool__	csb.core.AbstractContainer-class.html#__bool__
csb.core.AbstractContainer.__nonzero__	csb.core.AbstractContainer-class.html#__nonzero__
csb.core.AbstractContainer._abc_negative_cache_version	csb.core.AbstractContainer-class.html#_abc_negative_cache_version
csb.core.AbstractContainer._abc_registry	csb.core.AbstractContainer-class.html#_abc_registry
csb.core.AbstractIndexer	csb.core.AbstractIndexer-class.html
csb.core.AbstractIndexer.__getitem__	csb.core.AbstractIndexer-class.html#__getitem__
csb.core.AbstractIndexer._getinternal	csb.core.AbstractIndexer-class.html#_getinternal
csb.core.AbstractNIContainer	csb.core.AbstractNIContainer-class.html
csb.core.AbstractContainer.__metaclass__	abc.ABCMeta-class.html
csb.core.AbstractContainer._children	csb.core.AbstractContainer-class.html#_children
csb.core.AbstractContainer._abc_negative_cache	csb.core.AbstractContainer-class.html#_abc_negative_cache
csb.core.AbstractContainer._abc_cache	csb.core.AbstractContainer-class.html#_abc_cache
csb.core.AbstractContainer.__abstractmethods__	csb.core.AbstractContainer-class.html#__abstractmethods__
csb.core.AbstractContainer.__len__	csb.core.AbstractContainer-class.html#__len__
csb.core.AbstractNIContainer.__getitem__	csb.core.AbstractNIContainer-class.html#__getitem__
csb.core.AbstractContainer.__iter__	csb.core.AbstractContainer-class.html#__iter__
csb.core.AbstractContainer.__bool__	csb.core.AbstractContainer-class.html#__bool__
csb.core.AbstractContainer.__nonzero__	csb.core.AbstractContainer-class.html#__nonzero__
csb.core.AbstractContainer._abc_negative_cache_version	csb.core.AbstractContainer-class.html#_abc_negative_cache_version
csb.core.AbstractContainer._abc_registry	csb.core.AbstractContainer-class.html#_abc_registry
csb.core.BaseCollectionContainer	csb.core.BaseCollectionContainer-class.html
csb.core.BaseCollectionContainer._exception	csb.core.BaseCollectionContainer-class.html#_exception
csb.core.BaseCollectionContainer.last_index	csb.core.BaseCollectionContainer-class.html#last_index
csb.core.BaseCollectionContainer.__init__	csb.core.BaseCollectionContainer-class.html#__init__
csb.core.BaseCollectionContainer.__contains__	csb.core.BaseCollectionContainer-class.html#__contains__
csb.core.BaseCollectionContainer._getinternal	csb.core.BaseCollectionContainer-class.html#_getinternal
csb.core.BaseCollectionContainer._update_items	csb.core.BaseCollectionContainer-class.html#_update_items
csb.core.BaseCollectionContainer.__len__	csb.core.BaseCollectionContainer-class.html#__len__
csb.core.BaseCollectionContainer.__getitem__	csb.core.BaseCollectionContainer-class.html#__getitem__
csb.core.BaseCollectionContainer.__iter__	csb.core.BaseCollectionContainer-class.html#__iter__
csb.core.BaseCollectionContainer.__bool__	csb.core.BaseCollectionContainer-class.html#__bool__
csb.core.BaseCollectionContainer.start_index	csb.core.BaseCollectionContainer-class.html#start_index
csb.core.BaseCollectionContainer._append_item	csb.core.BaseCollectionContainer-class.html#_append_item
csb.core.BaseCollectionContainer.__nonzero__	csb.core.BaseCollectionContainer-class.html#__nonzero__
csb.core.BaseCollectionContainer._sort	csb.core.BaseCollectionContainer-class.html#_sort
csb.core.BaseCollectionContainer.__fix	csb.core.BaseCollectionContainer-class.html#__fix
csb.core.BaseCollectionContainer.length	csb.core.BaseCollectionContainer-class.html#length
csb.core.BaseCollectionContainer.__repr__	csb.core.BaseCollectionContainer-class.html#__repr__
csb.core.BaseDictionaryContainer	csb.core.BaseDictionaryContainer-class.html
csb.core.BaseDictionaryContainer._exception	csb.core.BaseDictionaryContainer-class.html#_exception
csb.core.BaseDictionaryContainer.__init__	csb.core.BaseDictionaryContainer-class.html#__init__
csb.core.BaseDictionaryContainer.__contains__	csb.core.BaseDictionaryContainer-class.html#__contains__
csb.core.BaseDictionaryContainer._getinternal	csb.core.BaseDictionaryContainer-class.html#_getinternal
csb.core.BaseDictionaryContainer._set_items	csb.core.BaseDictionaryContainer-class.html#_set_items
csb.core.BaseDictionaryContainer._update_items	csb.core.BaseDictionaryContainer-class.html#_update_items
csb.core.BaseDictionaryContainer.__len__	csb.core.BaseDictionaryContainer-class.html#__len__
csb.core.BaseDictionaryContainer.__getitem__	csb.core.BaseDictionaryContainer-class.html#__getitem__
csb.core.BaseDictionaryContainer.keys	csb.core.BaseDictionaryContainer-class.html#keys
csb.core.BaseDictionaryContainer.__iter__	csb.core.BaseDictionaryContainer-class.html#__iter__
csb.core.BaseDictionaryContainer.__bool__	csb.core.BaseDictionaryContainer-class.html#__bool__
csb.core.BaseDictionaryContainer._append_item	csb.core.BaseDictionaryContainer-class.html#_append_item
csb.core.BaseDictionaryContainer.__nonzero__	csb.core.BaseDictionaryContainer-class.html#__nonzero__
csb.core.BaseDictionaryContainer.length	csb.core.BaseDictionaryContainer-class.html#length
csb.core.BaseDictionaryContainer._remove_item	csb.core.BaseDictionaryContainer-class.html#_remove_item
csb.core.BaseDictionaryContainer.__repr__	csb.core.BaseDictionaryContainer-class.html#__repr__
csb.core.CollectionContainer	csb.core.CollectionContainer-class.html
csb.core.BaseCollectionContainer._exception	csb.core.BaseCollectionContainer-class.html#_exception
csb.core.CollectionContainer._update	csb.core.CollectionContainer-class.html#_update
csb.core.BaseCollectionContainer.last_index	csb.core.BaseCollectionContainer-class.html#last_index
csb.core.CollectionContainer.__init__	csb.core.CollectionContainer-class.html#__init__
csb.core.BaseCollectionContainer.__contains__	csb.core.BaseCollectionContainer-class.html#__contains__
csb.core.BaseCollectionContainer._getinternal	csb.core.BaseCollectionContainer-class.html#_getinternal
csb.core.CollectionContainer.append	csb.core.CollectionContainer-class.html#append
csb.core.BaseCollectionContainer._update_items	csb.core.BaseCollectionContainer-class.html#_update_items
csb.core.BaseCollectionContainer.__len__	csb.core.BaseCollectionContainer-class.html#__len__
csb.core.BaseCollectionContainer.__getitem__	csb.core.BaseCollectionContainer-class.html#__getitem__
csb.core.BaseCollectionContainer.__iter__	csb.core.BaseCollectionContainer-class.html#__iter__
csb.core.BaseCollectionContainer.__bool__	csb.core.BaseCollectionContainer-class.html#__bool__
csb.core.BaseCollectionContainer.start_index	csb.core.BaseCollectionContainer-class.html#start_index
csb.core.BaseCollectionContainer._append_item	csb.core.BaseCollectionContainer-class.html#_append_item
csb.core.BaseCollectionContainer.__nonzero__	csb.core.BaseCollectionContainer-class.html#__nonzero__
csb.core.BaseCollectionContainer._sort	csb.core.BaseCollectionContainer-class.html#_sort
csb.core.BaseCollectionContainer.length	csb.core.BaseCollectionContainer-class.html#length
csb.core.BaseCollectionContainer.__repr__	csb.core.BaseCollectionContainer-class.html#__repr__
csb.core.CollectionIndexError	csb.core.CollectionIndexError-class.html
csb.core.Container	csb.core.Container-class.html
csb.core.AbstractContainer.__metaclass__	abc.ABCMeta-class.html
csb.core.Container._children	csb.core.Container-class.html#_children
csb.core.AbstractContainer._abc_negative_cache	csb.core.AbstractContainer-class.html#_abc_negative_cache
csb.core.Container.__init__	csb.core.Container-class.html#__init__
csb.core.AbstractContainer._abc_cache	csb.core.AbstractContainer-class.html#_abc_cache
csb.core.Container.__abstractmethods__	csb.core.Container-class.html#__abstractmethods__
csb.core.AbstractContainer.__len__	csb.core.AbstractContainer-class.html#__len__
csb.core.AbstractContainer.__getitem__	csb.core.AbstractContainer-class.html#__getitem__
csb.core.AbstractContainer.__iter__	csb.core.AbstractContainer-class.html#__iter__
csb.core.AbstractContainer.__bool__	csb.core.AbstractContainer-class.html#__bool__
csb.core.AbstractContainer.__nonzero__	csb.core.AbstractContainer-class.html#__nonzero__
csb.core.AbstractContainer._abc_negative_cache_version	csb.core.AbstractContainer-class.html#_abc_negative_cache_version
csb.core.AbstractContainer._abc_registry	csb.core.AbstractContainer-class.html#_abc_registry
csb.core.DictionaryContainer	csb.core.DictionaryContainer-class.html
csb.core.BaseDictionaryContainer._exception	csb.core.BaseDictionaryContainer-class.html#_exception
csb.core.DictionaryContainer._update	csb.core.DictionaryContainer-class.html#_update
csb.core.DictionaryContainer.append	csb.core.DictionaryContainer-class.html#append
csb.core.BaseDictionaryContainer.__contains__	csb.core.BaseDictionaryContainer-class.html#__contains__
csb.core.BaseDictionaryContainer._getinternal	csb.core.BaseDictionaryContainer-class.html#_getinternal
csb.core.DictionaryContainer._remove	csb.core.DictionaryContainer-class.html#_remove
csb.core.DictionaryContainer.__init__	csb.core.DictionaryContainer-class.html#__init__
csb.core.BaseDictionaryContainer._set_items	csb.core.BaseDictionaryContainer-class.html#_set_items
csb.core.BaseDictionaryContainer._update_items	csb.core.BaseDictionaryContainer-class.html#_update_items
csb.core.BaseDictionaryContainer.__len__	csb.core.BaseDictionaryContainer-class.html#__len__
csb.core.BaseDictionaryContainer.__getitem__	csb.core.BaseDictionaryContainer-class.html#__getitem__
csb.core.BaseDictionaryContainer.keys	csb.core.BaseDictionaryContainer-class.html#keys
csb.core.BaseDictionaryContainer.__iter__	csb.core.BaseDictionaryContainer-class.html#__iter__
csb.core.BaseDictionaryContainer.__bool__	csb.core.BaseDictionaryContainer-class.html#__bool__
csb.core.BaseDictionaryContainer._append_item	csb.core.BaseDictionaryContainer-class.html#_append_item
csb.core.BaseDictionaryContainer.__nonzero__	csb.core.BaseDictionaryContainer-class.html#__nonzero__
csb.core.BaseDictionaryContainer.length	csb.core.BaseDictionaryContainer-class.html#length
csb.core.BaseDictionaryContainer._remove_item	csb.core.BaseDictionaryContainer-class.html#_remove_item
csb.core.BaseDictionaryContainer.__repr__	csb.core.BaseDictionaryContainer-class.html#__repr__
csb.core.DictionaryContainer._set	csb.core.DictionaryContainer-class.html#_set
csb.core.DuplicateKeyError	csb.core.DuplicateKeyError-class.html
csb.core.Enum	csb.core.Enum-class.html
csb.core.Enum.parse	csb.core.Enum-class.html#parse
csb.core.Enum.names	csb.core.Enum-class.html#names
csb.core.Enum.ismember	csb.core.Enum-class.html#ismember
csb.core.Enum.create	csb.core.Enum-class.html#create
csb.core.Enum.parsename	csb.core.Enum-class.html#parsename
csb.core.Enum.tostring	csb.core.Enum-class.html#tostring
csb.core.Enum.members	csb.core.Enum-class.html#members
csb.core.Enum.values	csb.core.Enum-class.html#values
csb.core.EnumBase	csb.core.EnumBase-class.html
csb.core.EnumBase._names	csb.core.EnumBase-class.html#_names
csb.core.EnumBase._namesci	csb.core.EnumBase-class.html#_namesci
csb.core.EnumBase._name	csb.core.EnumBase-class.html#_name
csb.core.EnumBase._valuesci	csb.core.EnumBase-class.html#_valuesci
csb.core.EnumBase._values	csb.core.EnumBase-class.html#_values
csb.core.EnumItem	csb.core.EnumItem-class.html
csb.core.EnumItem.__int__	csb.core.EnumItem-class.html#__int__
csb.core.EnumItem.__str__	csb.core.EnumItem-class.html#__str__
csb.core.EnumItem.__reduce__	csb.core.EnumItem-class.html#__reduce__
csb.core.EnumItem._attach	csb.core.EnumItem-class.html#_attach
csb.core.EnumItem.__lt__	csb.core.EnumItem-class.html#__lt__
csb.core.EnumItem.__init__	csb.core.EnumItem-class.html#__init__
csb.core.EnumItem.__float__	csb.core.EnumItem-class.html#__float__
csb.core.EnumItem.__ne__	csb.core.EnumItem-class.html#__ne__
csb.core.EnumItem.__deepcopy__	csb.core.EnumItem-class.html#__deepcopy__
csb.core.EnumItem.enum	csb.core.EnumItem-class.html#enum
csb.core.EnumItem.__eq__	csb.core.EnumItem-class.html#__eq__
csb.core.EnumItem.name	csb.core.EnumItem-class.html#name
csb.core.EnumItem.value	csb.core.EnumItem-class.html#value
csb.core.EnumItem.__repr__	csb.core.EnumItem-class.html#__repr__
csb.core.EnumItem.__hash__	csb.core.EnumItem-class.html#__hash__
csb.core.EnumItem.__copy__	csb.core.EnumItem-class.html#__copy__
csb.core.EnumMemberError	csb.core.EnumMemberError-class.html
csb.core.EnumMeta	csb.core.EnumMeta-class.html
csb.core.EnumMeta.__str__	csb.core.EnumMeta-class.html#__str__
csb.core.EnumMeta.__setattr__	csb.core.EnumMeta-class.html#__setattr__
csb.core.EnumMeta.__new__	csb.core.EnumMeta-class.html#__new__
csb.core.EnumMeta.__contains__	csb.core.EnumMeta-class.html#__contains__
csb.core.EnumMeta.__iter__	csb.core.EnumMeta-class.html#__iter__
csb.core.EnumMeta.__repr__	csb.core.EnumMeta-class.html#__repr__
csb.core.EnumValueError	csb.core.EnumValueError-class.html
csb.core.InterruptibleThread	csb.core.InterruptibleThread-class.html
csb.core.InterruptibleThread.result	csb.core.InterruptibleThread-class.html#result
csb.core.InterruptibleThread.__init__	csb.core.InterruptibleThread-class.html#__init__
csb.core.InterruptibleThread.run	csb.core.InterruptibleThread-class.html#run
csb.core.InvalidKeyError	csb.core.InvalidKeyError-class.html
csb.core.ItemNotFoundError	csb.core.ItemNotFoundError-class.html
csb.core.OrderedDict	csb.core.OrderedDict-class.html
csb.core.Proxy	csb.core.Proxy-class.html
csb.core.Proxy.__getattr__	csb.core.Proxy-class.html#__getattr__
csb.core.Proxy.__init__	csb.core.Proxy-class.html#__init__
csb.core.REMatchProxy	csb.core.REMatchProxy-class.html
csb.core.REMatchProxy.end	csb.core.REMatchProxy-class.html#end
csb.core.REMatchProxy.start	csb.core.REMatchProxy-class.html#start
csb.core.REMatchProxy.groups	csb.core.REMatchProxy-class.html#groups
csb.core.REMatchProxy.__init__	csb.core.REMatchProxy-class.html#__init__
csb.core.ReadOnlyCollectionContainer	csb.core.ReadOnlyCollectionContainer-class.html
csb.core.BaseCollectionContainer._exception	csb.core.BaseCollectionContainer-class.html#_exception
csb.core.BaseCollectionContainer.last_index	csb.core.BaseCollectionContainer-class.html#last_index
csb.core.BaseCollectionContainer.__init__	csb.core.BaseCollectionContainer-class.html#__init__
csb.core.BaseCollectionContainer.__contains__	csb.core.BaseCollectionContainer-class.html#__contains__
csb.core.BaseCollectionContainer._getinternal	csb.core.BaseCollectionContainer-class.html#_getinternal
csb.core.BaseCollectionContainer._update_items	csb.core.BaseCollectionContainer-class.html#_update_items
csb.core.BaseCollectionContainer.__len__	csb.core.BaseCollectionContainer-class.html#__len__
csb.core.BaseCollectionContainer.__getitem__	csb.core.BaseCollectionContainer-class.html#__getitem__
csb.core.BaseCollectionContainer.__iter__	csb.core.BaseCollectionContainer-class.html#__iter__
csb.core.BaseCollectionContainer.__bool__	csb.core.BaseCollectionContainer-class.html#__bool__
csb.core.BaseCollectionContainer.start_index	csb.core.BaseCollectionContainer-class.html#start_index
csb.core.BaseCollectionContainer._append_item	csb.core.BaseCollectionContainer-class.html#_append_item
csb.core.BaseCollectionContainer.__nonzero__	csb.core.BaseCollectionContainer-class.html#__nonzero__
csb.core.BaseCollectionContainer._sort	csb.core.BaseCollectionContainer-class.html#_sort
csb.core.BaseCollectionContainer.length	csb.core.BaseCollectionContainer-class.html#length
csb.core.BaseCollectionContainer.__repr__	csb.core.BaseCollectionContainer-class.html#__repr__
csb.core.ReadOnlyDictionaryContainer	csb.core.ReadOnlyDictionaryContainer-class.html
csb.core.BaseDictionaryContainer._exception	csb.core.BaseDictionaryContainer-class.html#_exception
csb.core.BaseDictionaryContainer.__init__	csb.core.BaseDictionaryContainer-class.html#__init__
csb.core.BaseDictionaryContainer.__contains__	csb.core.BaseDictionaryContainer-class.html#__contains__
csb.core.BaseDictionaryContainer._getinternal	csb.core.BaseDictionaryContainer-class.html#_getinternal
csb.core.BaseDictionaryContainer._set_items	csb.core.BaseDictionaryContainer-class.html#_set_items
csb.core.BaseDictionaryContainer._update_items	csb.core.BaseDictionaryContainer-class.html#_update_items
csb.core.BaseDictionaryContainer.__len__	csb.core.BaseDictionaryContainer-class.html#__len__
csb.core.BaseDictionaryContainer.__getitem__	csb.core.BaseDictionaryContainer-class.html#__getitem__
csb.core.BaseDictionaryContainer.keys	csb.core.BaseDictionaryContainer-class.html#keys
csb.core.BaseDictionaryContainer.__iter__	csb.core.BaseDictionaryContainer-class.html#__iter__
csb.core.BaseDictionaryContainer.__bool__	csb.core.BaseDictionaryContainer-class.html#__bool__
csb.core.BaseDictionaryContainer._append_item	csb.core.BaseDictionaryContainer-class.html#_append_item
csb.core.BaseDictionaryContainer.__nonzero__	csb.core.BaseDictionaryContainer-class.html#__nonzero__
csb.core.BaseDictionaryContainer.length	csb.core.BaseDictionaryContainer-class.html#length
csb.core.BaseDictionaryContainer._remove_item	csb.core.BaseDictionaryContainer-class.html#_remove_item
csb.core.BaseDictionaryContainer.__repr__	csb.core.BaseDictionaryContainer-class.html#__repr__
csb.core.Stack	csb.core.Stack-class.html
csb.core.Stack.peek	csb.core.Stack-class.html#peek
csb.core.Stack.empty	csb.core.Stack-class.html#empty
csb.core.Stack.push	csb.core.Stack-class.html#push
csb.core.enum	csb.core.enum-class.html
csb.core.EnumBase._names	csb.core.EnumBase-class.html#_names
csb.core.EnumBase._namesci	csb.core.EnumBase-class.html#_namesci
csb.core.enum._name	csb.core.enum-class.html#_name
csb.core.EnumBase._valuesci	csb.core.EnumBase-class.html#_valuesci
csb.core.EnumBase._values	csb.core.EnumBase-class.html#_values
csb.core.enum.__init__	csb.core.enum-class.html#__init__
csb.core.typedproperty	csb.core.typedproperty-class.html
csb.core.typedproperty.__init__	csb.core.typedproperty-class.html#__init__
csb.core.typedproperty.__set__	csb.core.typedproperty-class.html#__set__
csb.core.typedproperty.__call__	csb.core.typedproperty-class.html#__call__
csb.core.typedproperty.__get__	csb.core.typedproperty-class.html#__get__
csb.core.validatedproperty	csb.core.validatedproperty-class.html
csb.core.validatedproperty.__init__	csb.core.validatedproperty-class.html#__init__
csb.core.validatedproperty.__set__	csb.core.validatedproperty-class.html#__set__
csb.core.validatedproperty.__get__	csb.core.validatedproperty-class.html#__get__
csb.io.AutoFlushStream	csb.io.AutoFlushStream-class.html
csb.core.Proxy.__getattr__	csb.core.Proxy-class.html#__getattr__
csb.io.AutoFlushStream.write	csb.io.AutoFlushStream-class.html#write
csb.io.AutoFlushStream.__init__	csb.io.AutoFlushStream-class.html#__init__
csb.io.EntryReader	csb.io.EntryReader-class.html
csb.io.EntryReader.readall	csb.io.EntryReader-class.html#readall
csb.io.EntryReader.end_marker	csb.io.EntryReader-class.html#end_marker
csb.io.EntryReader.__del__	csb.io.EntryReader-class.html#__del__
csb.io.EntryReader.start_marker	csb.io.EntryReader-class.html#start_marker
csb.io.EntryReader.entries	csb.io.EntryReader-class.html#entries
csb.io.EntryReader.__init__	csb.io.EntryReader-class.html#__init__
csb.io.EntryWriter	csb.io.EntryWriter-class.html
csb.io.EntryWriter.stream	csb.io.EntryWriter-class.html#stream
csb.io.EntryWriter.writeline	csb.io.EntryWriter-class.html#writeline
csb.io.EntryWriter.close	csb.io.EntryWriter-class.html#close
csb.io.EntryWriter.__init__	csb.io.EntryWriter-class.html#__init__
csb.io.EntryWriter.__enter__	csb.io.EntryWriter-class.html#__enter__
csb.io.EntryWriter.write	csb.io.EntryWriter-class.html#write
csb.io.EntryWriter.autoclose	csb.io.EntryWriter-class.html#autoclose
csb.io.EntryWriter.__exit__	csb.io.EntryWriter-class.html#__exit__
csb.io.EntryWriter.__del__	csb.io.EntryWriter-class.html#__del__
csb.io.EntryWriter.newline	csb.io.EntryWriter-class.html#newline
csb.io.EntryWriter.writeall	csb.io.EntryWriter-class.html#writeall
csb.io.InvalidCommandError	csb.io.InvalidCommandError-class.html
csb.io.InvalidCommandError.__str__	csb.io.InvalidCommandError-class.html#__str__
csb.io.InvalidCommandError.__init__	csb.io.InvalidCommandError-class.html#__init__
csb.io.MemoryStream	csb.io.MemoryStream-class.html
csb.io.MemoryStream.__enter__	csb.io.MemoryStream-class.html#__enter__
csb.io.MemoryStream.__exit__	csb.io.MemoryStream-class.html#__exit__
csb.io.ProcessError	csb.io.ProcessError-class.html
csb.io.ProcessError.__str__	csb.io.ProcessError-class.html#__str__
csb.io.ProcessError.__init__	csb.io.ProcessError-class.html#__init__
csb.io.Shell	csb.io.Shell-class.html
csb.io.Shell.run	csb.io.Shell-class.html#run
csb.io.Shell.runstrict	csb.io.Shell-class.html#runstrict
csb.io.Shell.POLL	csb.io.Shell-class.html#POLL
csb.io.ShellInfo	csb.io.ShellInfo-class.html
csb.io.ShellInfo.__init__	csb.io.ShellInfo-class.html#__init__
csb.io.TempFile	csb.io.TempFile-class.html
csb.io.TempFile.__exit__	csb.io.TempFile-class.html#__exit__
csb.io.TempFile.name	csb.io.TempFile-class.html#name
csb.io.TempFile.__del__	csb.io.TempFile-class.html#__del__
csb.io.TempFile.__enter__	csb.io.TempFile-class.html#__enter__
csb.core.Proxy.__getattr__	csb.core.Proxy-class.html#__getattr__
csb.io.TempFile.content	csb.io.TempFile-class.html#content
csb.io.TempFile.close	csb.io.TempFile-class.html#close
csb.io.TempFile.__init__	csb.io.TempFile-class.html#__init__
csb.io.TempFolder	csb.io.TempFolder-class.html
csb.io.TempFolder.__exit__	csb.io.TempFolder-class.html#__exit__
csb.io.TempFolder.name	csb.io.TempFolder-class.html#name
csb.io.TempFolder.__del__	csb.io.TempFolder-class.html#__del__
csb.io.TempFolder.__enter__	csb.io.TempFolder-class.html#__enter__
csb.io.TempFolder.close	csb.io.TempFolder-class.html#close
csb.io.TempFolder.__init__	csb.io.TempFolder-class.html#__init__
csb.io.TimeoutError	csb.io.TimeoutError-class.html
csb.io.TimeoutError.__str__	csb.io.TimeoutError-class.html#__str__
csb.io.TimeoutError.__init__	csb.io.TimeoutError-class.html#__init__
csb.io.plots.Backend	csb.io.plots.Backend-class.html
csb.io.plots.Backend.__metaclass__	abc.ABCMeta-class.html
csb.io.plots.Backend.show	csb.io.plots.Backend-class.html#show
csb.io.plots.Backend._abc_negative_cache	csb.io.plots.Backend-class.html#_abc_negative_cache
csb.io.plots.Backend._add	csb.io.plots.Backend-class.html#_add
csb.io.plots.Backend.query	csb.io.plots.Backend-class.html#query
csb.io.plots.Backend.__init__	csb.io.plots.Backend-class.html#__init__
csb.io.plots.Backend._abc_cache	csb.io.plots.Backend-class.html#_abc_cache
csb.io.plots.Backend.hide	csb.io.plots.Backend-class.html#hide
csb.io.plots.Backend.start	csb.io.plots.Backend-class.html#start
csb.io.plots.Backend.__abstractmethods__	csb.io.plots.Backend-class.html#__abstractmethods__
csb.io.plots.Backend.add	csb.io.plots.Backend-class.html#add
csb.io.plots.Backend.__del__	csb.io.plots.Backend-class.html#__del__
csb.io.plots.Backend._hide	csb.io.plots.Backend-class.html#_hide
csb.io.plots.Backend._instances	csb.io.plots.Backend-class.html#_instances
csb.io.plots.Backend.run	csb.io.plots.Backend-class.html#run
csb.io.plots.Backend.destroy	csb.io.plots.Backend-class.html#destroy
csb.io.plots.Backend._resize	csb.io.plots.Backend-class.html#_resize
csb.io.plots.Backend.invoke	csb.io.plots.Backend-class.html#invoke
csb.io.plots.Backend.get	csb.io.plots.Backend-class.html#get
csb.io.plots.Backend.started	csb.io.plots.Backend-class.html#started
csb.io.plots.Backend.stop	csb.io.plots.Backend-class.html#stop
csb.io.plots.Backend.running	csb.io.plots.Backend-class.html#running
csb.io.plots.Backend.resize	csb.io.plots.Backend-class.html#resize
csb.io.plots.Backend._initapp	csb.io.plots.Backend-class.html#_initapp
csb.io.plots.Backend._show	csb.io.plots.Backend-class.html#_show
csb.io.plots.Backend.client_disposed	csb.io.plots.Backend-class.html#client_disposed
csb.io.plots.Backend._invoke	csb.io.plots.Backend-class.html#_invoke
csb.io.plots.Backend._mainloop	csb.io.plots.Backend-class.html#_mainloop
csb.io.plots.Backend._abc_negative_cache_version	csb.io.plots.Backend-class.html#_abc_negative_cache_version
csb.io.plots.Backend._destroy	csb.io.plots.Backend-class.html#_destroy
csb.io.plots.Backend._exit	csb.io.plots.Backend-class.html#_exit
csb.io.plots.Backend._abc_registry	csb.io.plots.Backend-class.html#_abc_registry
csb.io.plots.Backends	csb.io.plots.Backends-class.html
csb.io.plots.Backends.WX_WIDGETS	csb.io.plots.WxBackendImpl-class.html
csb.io.plots.Chart	csb.io.plots.Chart-class.html
csb.io.plots.Chart.show	csb.io.plots.Chart-class.html#show
csb.io.plots.Chart.number	csb.io.plots.Chart-class.html#number
csb.io.plots.Chart.height	csb.io.plots.Chart-class.html#height
csb.io.plots.Chart.__init__	csb.io.plots.Chart-class.html#__init__
csb.io.plots.Chart.plot	csb.io.plots.Chart-class.html#plot
csb.io.plots.Chart.rows	csb.io.plots.Chart-class.html#rows
csb.io.plots.Chart.hide	csb.io.plots.Chart-class.html#hide
csb.io.plots.Chart.title	csb.io.plots.Chart-class.html#title
csb.io.plots.Chart.__enter__	csb.io.plots.Chart-class.html#__enter__
csb.io.plots.Chart.dispose	csb.io.plots.Chart-class.html#dispose
csb.io.plots.Chart.width	csb.io.plots.Chart-class.html#width
csb.io.plots.Chart.save	csb.io.plots.Chart-class.html#save
csb.io.plots.Chart.columns	csb.io.plots.Chart-class.html#columns
csb.io.plots.Chart.__exit__	csb.io.plots.Chart-class.html#__exit__
csb.io.plots.Chart.__getitem__	csb.io.plots.Chart-class.html#__getitem__
csb.io.plots.Chart.AUTONUMBER	csb.io.plots.Chart-class.html#AUTONUMBER
csb.io.plots.Chart.plots	csb.io.plots.Chart-class.html#plots
csb.io.plots.Chart._backend	csb.io.plots.Chart-class.html#_backend
csb.io.plots.Chart._backend_started	csb.io.plots.Chart-class.html#_backend_started
csb.io.plots.Chart.formats	csb.io.plots.Chart-class.html#formats
csb.io.plots.Chart._serial	csb.io.plots.Chart-class.html#_serial
csb.io.plots.Chart.dpi	csb.io.plots.Chart-class.html#dpi
csb.io.plots.PlotsCollection	csb.io.plots.PlotsCollection-class.html
csb.io.plots.PlotsCollection.__getitem__	csb.io.plots.PlotsCollection-class.html#__getitem__
csb.io.plots.PlotsCollection._active_plots	csb.io.plots.PlotsCollection-class.html#_active_plots
csb.io.plots.PlotsCollection._add	csb.io.plots.PlotsCollection-class.html#_add
csb.io.plots.PlotsCollection.__iter__	csb.io.plots.PlotsCollection-class.html#__iter__
csb.io.plots.PlotsCollection.__init__	csb.io.plots.PlotsCollection-class.html#__init__
csb.io.plots.PlotsCollection.__len__	csb.io.plots.PlotsCollection-class.html#__len__
csb.io.plots.WxBackendImpl	csb.io.plots.WxBackendImpl-class.html
csb.io.plots.Backend.__metaclass__	abc.ABCMeta-class.html
csb.io.plots.Backend.show	csb.io.plots.Backend-class.html#show
csb.io.plots.Backend._abc_negative_cache	csb.io.plots.Backend-class.html#_abc_negative_cache
csb.io.plots.WxBackendImpl._wxapp	csb.io.plots.WxBackendImpl-class.html#_wxapp
csb.io.plots.WxBackendImpl._add	csb.io.plots.WxBackendImpl-class.html#_add
csb.io.plots.Backend.query	csb.io.plots.Backend-class.html#query
csb.io.plots.WxBackendImpl.__init__	csb.io.plots.WxBackendImpl-class.html#__init__
csb.io.plots.Backend._abc_cache	csb.io.plots.Backend-class.html#_abc_cache
csb.io.plots.Backend.hide	csb.io.plots.Backend-class.html#hide
csb.io.plots.WxBackendImpl.__abstractmethods__	csb.io.plots.WxBackendImpl-class.html#__abstractmethods__
csb.io.plots.WxBackendImpl._hide	csb.io.plots.WxBackendImpl-class.html#_hide
csb.io.plots.Backend.start	csb.io.plots.Backend-class.html#start
csb.io.plots.Backend.add	csb.io.plots.Backend-class.html#add
csb.io.plots.Backend._instances	csb.io.plots.Backend-class.html#_instances
csb.io.plots.Backend.run	csb.io.plots.Backend-class.html#run
csb.io.plots.WxBackendImpl._app	csb.io.plots.WxBackendImpl-class.html#_app
csb.io.plots.Backend.destroy	csb.io.plots.Backend-class.html#destroy
csb.io.plots.Backend.started	csb.io.plots.Backend-class.html#started
csb.io.plots.WxBackendImpl._resize	csb.io.plots.WxBackendImpl-class.html#_resize
csb.io.plots.Backend.invoke	csb.io.plots.Backend-class.html#invoke
csb.io.plots.Backend.get	csb.io.plots.Backend-class.html#get
csb.io.plots.Backend.__del__	csb.io.plots.Backend-class.html#__del__
csb.io.plots.Backend.stop	csb.io.plots.Backend-class.html#stop
csb.io.plots.Backend.running	csb.io.plots.Backend-class.html#running
csb.io.plots.Backend.resize	csb.io.plots.Backend-class.html#resize
csb.io.plots.WxBackendImpl._initapp	csb.io.plots.WxBackendImpl-class.html#_initapp
csb.io.plots.WxBackendImpl._show	csb.io.plots.WxBackendImpl-class.html#_show
csb.io.plots.Backend.client_disposed	csb.io.plots.Backend-class.html#client_disposed
csb.io.plots.WxBackendImpl._invoke	csb.io.plots.WxBackendImpl-class.html#_invoke
csb.io.plots.WxBackendImpl._mainloop	csb.io.plots.WxBackendImpl-class.html#_mainloop
csb.io.plots.Backend._abc_negative_cache_version	csb.io.plots.Backend-class.html#_abc_negative_cache_version
csb.io.plots.WxBackendImpl._destroy	csb.io.plots.WxBackendImpl-class.html#_destroy
csb.io.plots.WxBackendImpl._exit	csb.io.plots.WxBackendImpl-class.html#_exit
csb.io.plots.Backend._abc_registry	csb.io.plots.Backend-class.html#_abc_registry
csb.io.tsv.Between	csb.io.tsv.Between-class.html
csb.io.tsv.Predicate.__metaclass__	abc.ABCMeta-class.html
csb.io.tsv.Predicate._validate	csb.io.tsv.Predicate-class.html#_validate
csb.io.tsv.Predicate._abc_negative_cache	csb.io.tsv.Predicate-class.html#_abc_negative_cache
csb.io.tsv.Predicate.__str__	csb.io.tsv.Predicate-class.html#__str__
csb.io.tsv.Between.__init__	csb.io.tsv.Between-class.html#__init__
csb.io.tsv.Predicate._abc_cache	csb.io.tsv.Predicate-class.html#_abc_cache
csb.io.tsv.Between.__abstractmethods__	csb.io.tsv.Between-class.html#__abstractmethods__
csb.io.tsv.Predicate.params	csb.io.tsv.Predicate-class.html#params
csb.io.tsv.Predicate.PH	csb.io.tsv.Predicate-class.html#PH
csb.io.tsv.Between.sql	csb.io.tsv.Between-class.html#sql
csb.io.tsv.Predicate._abc_negative_cache_version	csb.io.tsv.Predicate-class.html#_abc_negative_cache_version
csb.io.tsv.Predicate._abc_registry	csb.io.tsv.Predicate-class.html#_abc_registry
csb.io.tsv.ColumnInfo	csb.io.tsv.ColumnInfo-class.html
csb.io.tsv.ColumnInfo.name	csb.io.tsv.ColumnInfo-class.html#name
csb.io.tsv.ColumnInfo.__str__	csb.io.tsv.ColumnInfo-class.html#__str__
csb.io.tsv.ColumnInfo.copy	csb.io.tsv.ColumnInfo-class.html#copy
csb.io.tsv.ColumnInfo.type	csb.io.tsv.ColumnInfo-class.html#type
csb.io.tsv.ColumnInfo.__init__	csb.io.tsv.ColumnInfo-class.html#__init__
csb.io.tsv.DataRow	csb.io.tsv.DataRow-class.html
csb.io.tsv.DataRow.__getitem__	csb.io.tsv.DataRow-class.html#__getitem__
csb.io.tsv.DataRow.dump	csb.io.tsv.DataRow-class.html#dump
csb.io.tsv.DataRow.__str__	csb.io.tsv.DataRow-class.html#__str__
csb.io.tsv.DataRow.columns	csb.io.tsv.DataRow-class.html#columns
csb.io.tsv.DataRow.number	csb.io.tsv.DataRow-class.html#number
csb.io.tsv.DataRow.__iter__	csb.io.tsv.DataRow-class.html#__iter__
csb.io.tsv.DataRow.__init__	csb.io.tsv.DataRow-class.html#__init__
csb.io.tsv.DataRow.__len__	csb.io.tsv.DataRow-class.html#__len__
csb.io.tsv.DataRow.__repr__	csb.io.tsv.DataRow-class.html#__repr__
csb.io.tsv.Equals	csb.io.tsv.Equals-class.html
csb.io.tsv.Predicate.__metaclass__	abc.ABCMeta-class.html
csb.io.tsv.Predicate._validate	csb.io.tsv.Predicate-class.html#_validate
csb.io.tsv.Predicate._abc_negative_cache	csb.io.tsv.Predicate-class.html#_abc_negative_cache
csb.io.tsv.Predicate.__str__	csb.io.tsv.Predicate-class.html#__str__
csb.io.tsv.Predicate.__init__	csb.io.tsv.Predicate-class.html#__init__
csb.io.tsv.Predicate._abc_cache	csb.io.tsv.Predicate-class.html#_abc_cache
csb.io.tsv.Equals.__abstractmethods__	csb.io.tsv.Equals-class.html#__abstractmethods__
csb.io.tsv.Predicate.params	csb.io.tsv.Predicate-class.html#params
csb.io.tsv.Predicate.PH	csb.io.tsv.Predicate-class.html#PH
csb.io.tsv.Equals.sql	csb.io.tsv.Equals-class.html#sql
csb.io.tsv.Predicate._abc_negative_cache_version	csb.io.tsv.Predicate-class.html#_abc_negative_cache_version
csb.io.tsv.Predicate._abc_registry	csb.io.tsv.Predicate-class.html#_abc_registry
csb.io.tsv.Expression	csb.io.tsv.Expression-class.html
csb.io.tsv.Expression.all	csb.io.tsv.Expression-class.html#all
csb.io.tsv.Expression.scalar	csb.io.tsv.Expression-class.html#scalar
csb.io.tsv.Expression.array	csb.io.tsv.Expression-class.html#array
csb.io.tsv.Expression.select	csb.io.tsv.Expression-class.html#select
csb.io.tsv.Expression.params	csb.io.tsv.Expression-class.html#params
csb.io.tsv.Expression.__init__	csb.io.tsv.Expression-class.html#__init__
csb.io.tsv.Expression.predicate	csb.io.tsv.Expression-class.html#predicate
csb.io.tsv.Expression.data	csb.io.tsv.Expression-class.html#data
csb.io.tsv.Expression.where	csb.io.tsv.Expression-class.html#where
csb.io.tsv.Greater	csb.io.tsv.Greater-class.html
csb.io.tsv.Predicate.__metaclass__	abc.ABCMeta-class.html
csb.io.tsv.Predicate._validate	csb.io.tsv.Predicate-class.html#_validate
csb.io.tsv.Predicate._abc_negative_cache	csb.io.tsv.Predicate-class.html#_abc_negative_cache
csb.io.tsv.Predicate.__str__	csb.io.tsv.Predicate-class.html#__str__
csb.io.tsv.Predicate.__init__	csb.io.tsv.Predicate-class.html#__init__
csb.io.tsv.Predicate._abc_cache	csb.io.tsv.Predicate-class.html#_abc_cache
csb.io.tsv.Greater.__abstractmethods__	csb.io.tsv.Greater-class.html#__abstractmethods__
csb.io.tsv.Predicate.params	csb.io.tsv.Predicate-class.html#params
csb.io.tsv.Predicate.PH	csb.io.tsv.Predicate-class.html#PH
csb.io.tsv.Greater.sql	csb.io.tsv.Greater-class.html#sql
csb.io.tsv.Predicate._abc_negative_cache_version	csb.io.tsv.Predicate-class.html#_abc_negative_cache_version
csb.io.tsv.Predicate._abc_registry	csb.io.tsv.Predicate-class.html#_abc_registry
csb.io.tsv.GreaterOrEquals	csb.io.tsv.GreaterOrEquals-class.html
csb.io.tsv.Predicate.__metaclass__	abc.ABCMeta-class.html
csb.io.tsv.Predicate._validate	csb.io.tsv.Predicate-class.html#_validate
csb.io.tsv.Predicate._abc_negative_cache	csb.io.tsv.Predicate-class.html#_abc_negative_cache
csb.io.tsv.Predicate.__str__	csb.io.tsv.Predicate-class.html#__str__
csb.io.tsv.Predicate.__init__	csb.io.tsv.Predicate-class.html#__init__
csb.io.tsv.Predicate._abc_cache	csb.io.tsv.Predicate-class.html#_abc_cache
csb.io.tsv.GreaterOrEquals.__abstractmethods__	csb.io.tsv.GreaterOrEquals-class.html#__abstractmethods__
csb.io.tsv.Predicate.params	csb.io.tsv.Predicate-class.html#params
csb.io.tsv.Predicate.PH	csb.io.tsv.Predicate-class.html#PH
csb.io.tsv.GreaterOrEquals.sql	csb.io.tsv.GreaterOrEquals-class.html#sql
csb.io.tsv.Predicate._abc_negative_cache_version	csb.io.tsv.Predicate-class.html#_abc_negative_cache_version
csb.io.tsv.Predicate._abc_registry	csb.io.tsv.Predicate-class.html#_abc_registry
csb.io.tsv.In	csb.io.tsv.In-class.html
csb.io.tsv.Predicate.__metaclass__	abc.ABCMeta-class.html
csb.io.tsv.Predicate._validate	csb.io.tsv.Predicate-class.html#_validate
csb.io.tsv.Predicate._abc_negative_cache	csb.io.tsv.Predicate-class.html#_abc_negative_cache
csb.io.tsv.Predicate.__str__	csb.io.tsv.Predicate-class.html#__str__
csb.io.tsv.Predicate.__init__	csb.io.tsv.Predicate-class.html#__init__
csb.io.tsv.Predicate._abc_cache	csb.io.tsv.Predicate-class.html#_abc_cache
csb.io.tsv.In.__abstractmethods__	csb.io.tsv.In-class.html#__abstractmethods__
csb.io.tsv.Predicate.params	csb.io.tsv.Predicate-class.html#params
csb.io.tsv.Predicate.PH	csb.io.tsv.Predicate-class.html#PH
csb.io.tsv.In.sql	csb.io.tsv.In-class.html#sql
csb.io.tsv.Predicate._abc_negative_cache_version	csb.io.tsv.Predicate-class.html#_abc_negative_cache_version
csb.io.tsv.Predicate._abc_registry	csb.io.tsv.Predicate-class.html#_abc_registry
csb.io.tsv.InvalidColumnError	csb.io.tsv.InvalidColumnError-class.html
csb.io.tsv.Lower	csb.io.tsv.Lower-class.html
csb.io.tsv.Predicate.__metaclass__	abc.ABCMeta-class.html
csb.io.tsv.Predicate._validate	csb.io.tsv.Predicate-class.html#_validate
csb.io.tsv.Predicate._abc_negative_cache	csb.io.tsv.Predicate-class.html#_abc_negative_cache
csb.io.tsv.Predicate.__str__	csb.io.tsv.Predicate-class.html#__str__
csb.io.tsv.Predicate.__init__	csb.io.tsv.Predicate-class.html#__init__
csb.io.tsv.Predicate._abc_cache	csb.io.tsv.Predicate-class.html#_abc_cache
csb.io.tsv.Lower.__abstractmethods__	csb.io.tsv.Lower-class.html#__abstractmethods__
csb.io.tsv.Predicate.params	csb.io.tsv.Predicate-class.html#params
csb.io.tsv.Predicate.PH	csb.io.tsv.Predicate-class.html#PH
csb.io.tsv.Lower.sql	csb.io.tsv.Lower-class.html#sql
csb.io.tsv.Predicate._abc_negative_cache_version	csb.io.tsv.Predicate-class.html#_abc_negative_cache_version
csb.io.tsv.Predicate._abc_registry	csb.io.tsv.Predicate-class.html#_abc_registry
csb.io.tsv.LowerOrEquals	csb.io.tsv.LowerOrEquals-class.html
csb.io.tsv.Predicate.__metaclass__	abc.ABCMeta-class.html
csb.io.tsv.Predicate._validate	csb.io.tsv.Predicate-class.html#_validate
csb.io.tsv.Predicate._abc_negative_cache	csb.io.tsv.Predicate-class.html#_abc_negative_cache
csb.io.tsv.Predicate.__str__	csb.io.tsv.Predicate-class.html#__str__
csb.io.tsv.Predicate.__init__	csb.io.tsv.Predicate-class.html#__init__
csb.io.tsv.Predicate._abc_cache	csb.io.tsv.Predicate-class.html#_abc_cache
csb.io.tsv.LowerOrEquals.__abstractmethods__	csb.io.tsv.LowerOrEquals-class.html#__abstractmethods__
csb.io.tsv.Predicate.params	csb.io.tsv.Predicate-class.html#params
csb.io.tsv.Predicate.PH	csb.io.tsv.Predicate-class.html#PH
csb.io.tsv.LowerOrEquals.sql	csb.io.tsv.LowerOrEquals-class.html#sql
csb.io.tsv.Predicate._abc_negative_cache_version	csb.io.tsv.Predicate-class.html#_abc_negative_cache_version
csb.io.tsv.Predicate._abc_registry	csb.io.tsv.Predicate-class.html#_abc_registry
csb.io.tsv.NotEquals	csb.io.tsv.NotEquals-class.html
csb.io.tsv.Predicate.__metaclass__	abc.ABCMeta-class.html
csb.io.tsv.Predicate._validate	csb.io.tsv.Predicate-class.html#_validate
csb.io.tsv.Predicate._abc_negative_cache	csb.io.tsv.Predicate-class.html#_abc_negative_cache
csb.io.tsv.Predicate.__str__	csb.io.tsv.Predicate-class.html#__str__
csb.io.tsv.Predicate.__init__	csb.io.tsv.Predicate-class.html#__init__
csb.io.tsv.Predicate._abc_cache	csb.io.tsv.Predicate-class.html#_abc_cache
csb.io.tsv.NotEquals.__abstractmethods__	csb.io.tsv.NotEquals-class.html#__abstractmethods__
csb.io.tsv.Predicate.params	csb.io.tsv.Predicate-class.html#params
csb.io.tsv.Predicate.PH	csb.io.tsv.Predicate-class.html#PH
csb.io.tsv.NotEquals.sql	csb.io.tsv.NotEquals-class.html#sql
csb.io.tsv.Predicate._abc_negative_cache_version	csb.io.tsv.Predicate-class.html#_abc_negative_cache_version
csb.io.tsv.Predicate._abc_registry	csb.io.tsv.Predicate-class.html#_abc_registry
csb.io.tsv.NotIn	csb.io.tsv.NotIn-class.html
csb.io.tsv.Predicate.__metaclass__	abc.ABCMeta-class.html
csb.io.tsv.Predicate._validate	csb.io.tsv.Predicate-class.html#_validate
csb.io.tsv.Predicate._abc_negative_cache	csb.io.tsv.Predicate-class.html#_abc_negative_cache
csb.io.tsv.Predicate.__str__	csb.io.tsv.Predicate-class.html#__str__
csb.io.tsv.Predicate.__init__	csb.io.tsv.Predicate-class.html#__init__
csb.io.tsv.Predicate._abc_cache	csb.io.tsv.Predicate-class.html#_abc_cache
csb.io.tsv.NotIn.__abstractmethods__	csb.io.tsv.NotIn-class.html#__abstractmethods__
csb.io.tsv.Predicate.params	csb.io.tsv.Predicate-class.html#params
csb.io.tsv.Predicate.PH	csb.io.tsv.Predicate-class.html#PH
csb.io.tsv.NotIn.sql	csb.io.tsv.NotIn-class.html#sql
csb.io.tsv.Predicate._abc_negative_cache_version	csb.io.tsv.Predicate-class.html#_abc_negative_cache_version
csb.io.tsv.Predicate._abc_registry	csb.io.tsv.Predicate-class.html#_abc_registry
csb.io.tsv.Operator	csb.io.tsv.Operator-class.html
csb.io.tsv.Operator.update	csb.io.tsv.Operator-class.html#update
csb.io.tsv.Operator.__init__	csb.io.tsv.Operator-class.html#__init__
csb.io.tsv.Step.table	csb.io.tsv.Step-class.html#table
csb.io.tsv.Step.expression	csb.io.tsv.Step-class.html#expression
csb.io.tsv.Operator.select	csb.io.tsv.Operator-class.html#select
csb.io.tsv.Predicate	csb.io.tsv.Predicate-class.html
csb.io.tsv.Predicate.__metaclass__	abc.ABCMeta-class.html
csb.io.tsv.Predicate._validate	csb.io.tsv.Predicate-class.html#_validate
csb.io.tsv.Predicate._abc_negative_cache	csb.io.tsv.Predicate-class.html#_abc_negative_cache
csb.io.tsv.Predicate.__str__	csb.io.tsv.Predicate-class.html#__str__
csb.io.tsv.Predicate.__init__	csb.io.tsv.Predicate-class.html#__init__
csb.io.tsv.Predicate._abc_cache	csb.io.tsv.Predicate-class.html#_abc_cache
csb.io.tsv.Predicate.__abstractmethods__	csb.io.tsv.Predicate-class.html#__abstractmethods__
csb.io.tsv.Predicate.params	csb.io.tsv.Predicate-class.html#params
csb.io.tsv.Predicate.PH	csb.io.tsv.Predicate-class.html#PH
csb.io.tsv.Predicate.sql	csb.io.tsv.Predicate-class.html#sql
csb.io.tsv.Predicate._abc_negative_cache_version	csb.io.tsv.Predicate-class.html#_abc_negative_cache_version
csb.io.tsv.Predicate._abc_registry	csb.io.tsv.Predicate-class.html#_abc_registry
csb.io.tsv.RepositoryImp	csb.io.tsv.RepositoryImp-class.html
csb.io.tsv.RepositoryImp.__metaclass__	abc.ABCMeta-class.html
csb.io.tsv.RepositoryImp._abc_negative_cache	csb.io.tsv.RepositoryImp-class.html#_abc_negative_cache
csb.io.tsv.RepositoryImp.table	csb.io.tsv.RepositoryImp-class.html#table
csb.io.tsv.RepositoryImp.close	csb.io.tsv.RepositoryImp-class.html#close
csb.io.tsv.RepositoryImp.__init__	csb.io.tsv.RepositoryImp-class.html#__init__
csb.io.tsv.RepositoryImp._abc_cache	csb.io.tsv.RepositoryImp-class.html#_abc_cache
csb.io.tsv.RepositoryImp.create	csb.io.tsv.RepositoryImp-class.html#create
csb.io.tsv.RepositoryImp.__abstractmethods__	csb.io.tsv.RepositoryImp-class.html#__abstractmethods__
csb.io.tsv.RepositoryImp.query	csb.io.tsv.RepositoryImp-class.html#query
csb.io.tsv.RepositoryImp.pk	csb.io.tsv.RepositoryImp-class.html#pk
csb.io.tsv.RepositoryImp.update	csb.io.tsv.RepositoryImp-class.html#update
csb.io.tsv.RepositoryImp.count	csb.io.tsv.RepositoryImp-class.html#count
csb.io.tsv.RepositoryImp.insert	csb.io.tsv.RepositoryImp-class.html#insert
csb.io.tsv.RepositoryImp.execute	csb.io.tsv.RepositoryImp-class.html#execute
csb.io.tsv.RepositoryImp._abc_negative_cache_version	csb.io.tsv.RepositoryImp-class.html#_abc_negative_cache_version
csb.io.tsv.RepositoryImp._abc_registry	csb.io.tsv.RepositoryImp-class.html#_abc_registry
csb.io.tsv.SQLiteRepository	csb.io.tsv.SQLiteRepository-class.html
csb.io.tsv.RepositoryImp.__metaclass__	abc.ABCMeta-class.html
csb.io.tsv.SQLiteRepository._gettype	csb.io.tsv.SQLiteRepository-class.html#_gettype
csb.io.tsv.RepositoryImp._abc_negative_cache	csb.io.tsv.RepositoryImp-class.html#_abc_negative_cache
csb.io.tsv.SQLiteRepository.close	csb.io.tsv.SQLiteRepository-class.html#close
csb.io.tsv.SQLiteRepository.query	csb.io.tsv.SQLiteRepository-class.html#query
csb.io.tsv.SQLiteRepository._cursor	csb.io.tsv.SQLiteRepository-class.html#_cursor
csb.io.tsv.SQLiteRepository.__init__	csb.io.tsv.SQLiteRepository-class.html#__init__
csb.io.tsv.RepositoryImp._abc_cache	csb.io.tsv.RepositoryImp-class.html#_abc_cache
csb.io.tsv.SQLiteRepository.ChunkedReader	csb.io.tsv.SQLiteRepository.ChunkedReader-class.html
csb.io.tsv.SQLiteRepository.create	csb.io.tsv.SQLiteRepository-class.html#create
csb.io.tsv.SQLiteRepository.__abstractmethods__	csb.io.tsv.SQLiteRepository-class.html#__abstractmethods__
csb.io.tsv.SQLiteRepository.pk	csb.io.tsv.SQLiteRepository-class.html#pk
csb.io.tsv.SQLiteRepository.TYPES	csb.io.tsv.SQLiteRepository-class.html#TYPES
csb.io.tsv.SQLiteRepository.update	csb.io.tsv.SQLiteRepository-class.html#update
csb.io.tsv.SQLiteRepository.PK	csb.io.tsv.SQLiteRepository-class.html#PK
csb.io.tsv.RepositoryImp.table	csb.io.tsv.RepositoryImp-class.html#table
csb.io.tsv.SQLiteRepository.count	csb.io.tsv.SQLiteRepository-class.html#count
csb.io.tsv.SQLiteRepository.insert	csb.io.tsv.SQLiteRepository-class.html#insert
csb.io.tsv.SQLiteRepository.execute	csb.io.tsv.SQLiteRepository-class.html#execute
csb.io.tsv.RepositoryImp._abc_negative_cache_version	csb.io.tsv.RepositoryImp-class.html#_abc_negative_cache_version
csb.io.tsv.RepositoryImp._abc_registry	csb.io.tsv.RepositoryImp-class.html#_abc_registry
csb.io.tsv.SQLiteRepository.ChunkedReader	csb.io.tsv.SQLiteRepository.ChunkedReader-class.html
csb.io.tsv.SQLiteRepository.ChunkedReader.__iter__	csb.io.tsv.SQLiteRepository.ChunkedReader-class.html#__iter__
csb.io.tsv.SQLiteRepository.ChunkedReader.__init__	csb.io.tsv.SQLiteRepository.ChunkedReader-class.html#__init__
csb.io.tsv.SQLiteRepository.ChunkedReader.SIZE	csb.io.tsv.SQLiteRepository.ChunkedReader-class.html#SIZE
csb.io.tsv.Step	csb.io.tsv.Step-class.html
csb.io.tsv.Step.table	csb.io.tsv.Step-class.html#table
csb.io.tsv.Step.expression	csb.io.tsv.Step-class.html#expression
csb.io.tsv.Step.__init__	csb.io.tsv.Step-class.html#__init__
csb.io.tsv.Table	csb.io.tsv.Table-class.html
csb.io.tsv.Table._update	csb.io.tsv.Table-class.html#_update
csb.io.tsv.Table.dump	csb.io.tsv.Table-class.html#dump
csb.io.tsv.Table.scalar	csb.io.tsv.Table-class.html#scalar
csb.io.tsv.Table.from_iterable	csb.io.tsv.Table-class.html#from_iterable
csb.io.tsv.Table._convert	csb.io.tsv.Table-class.html#_convert
csb.io.tsv.Table.query	csb.io.tsv.Table-class.html#query
csb.io.tsv.Table.NULL	csb.io.tsv.Table-class.html#NULL
csb.io.tsv.Table.select	csb.io.tsv.Table-class.html#select
csb.io.tsv.Table.from_tsv	csb.io.tsv.Table-class.html#from_tsv
csb.io.tsv.Table._execute	csb.io.tsv.Table-class.html#_execute
csb.io.tsv.Table._getcols	csb.io.tsv.Table-class.html#_getcols
csb.io.tsv.Table.__init__	csb.io.tsv.Table-class.html#__init__
csb.io.tsv.Table.pk	csb.io.tsv.Table-class.html#pk
csb.io.tsv.Table.__getstate__	csb.io.tsv.Table-class.html#__getstate__
csb.io.tsv.Table.__len__	csb.io.tsv.Table-class.html#__len__
csb.io.tsv.Table._isnull	csb.io.tsv.Table-class.html#_isnull
csb.io.tsv.Table.__getitem__	csb.io.tsv.Table-class.html#__getitem__
csb.io.tsv.Table.__setstate__	csb.io.tsv.Table-class.html#__setstate__
csb.io.tsv.Table.__del__	csb.io.tsv.Table-class.html#__del__
csb.io.tsv.Table.update	csb.io.tsv.Table-class.html#update
csb.io.tsv.Table.HEADER	csb.io.tsv.Table-class.html#HEADER
csb.io.tsv.Table.__setitem__	csb.io.tsv.Table-class.html#__setitem__
csb.io.tsv.Table._checkrow	csb.io.tsv.Table-class.html#_checkrow
csb.io.tsv.Table._interpret	csb.io.tsv.Table-class.html#_interpret
csb.io.tsv.Table.insert	csb.io.tsv.Table-class.html#insert
csb.io.tsv.Table.name	csb.io.tsv.Table-class.html#name
csb.io.tsv.Table.__array__	csb.io.tsv.Table-class.html#__array__
csb.io.tsv.Table.column	csb.io.tsv.Table-class.html#column
csb.io.tsv.Table.__iter__	csb.io.tsv.Table-class.html#__iter__
csb.io.tsv.Table.columns	csb.io.tsv.Table-class.html#columns
csb.io.tsv.Table.from_table	csb.io.tsv.Table-class.html#from_table
csb.io.tsv.Table._project	csb.io.tsv.Table-class.html#_project
csb.io.tsv.Table.where	csb.io.tsv.Table-class.html#where
csb.io.tsv.UnsupportedTypeError	csb.io.tsv.UnsupportedTypeError-class.html
csb.io.tsv.Where	csb.io.tsv.Where-class.html
csb.io.tsv.Step.table	csb.io.tsv.Step-class.html#table
csb.io.tsv.Where.__init__	csb.io.tsv.Where-class.html#__init__
csb.io.tsv.Where.notequals	csb.io.tsv.Where-class.html#notequals
csb.io.tsv.Where.in_	csb.io.tsv.Where-class.html#in_
csb.io.tsv.Where.between	csb.io.tsv.Where-class.html#between
csb.io.tsv.Where.notin	csb.io.tsv.Where-class.html#notin
csb.io.tsv.Where.greater	csb.io.tsv.Where-class.html#greater
csb.io.tsv.Where.equals	csb.io.tsv.Where-class.html#equals
csb.io.tsv.Where.lower	csb.io.tsv.Where-class.html#lower
csb.io.tsv.Step.expression	csb.io.tsv.Step-class.html#expression
csb.numeric.InvertibleMatrix	csb.numeric.InvertibleMatrix-class.html
csb.numeric.InvertibleMatrix.__str__	csb.numeric.InvertibleMatrix-class.html#__str__
csb.numeric.InvertibleMatrix._deprecate_matrix	csb.numeric.InvertibleMatrix-class.html#_deprecate_matrix
csb.numeric.InvertibleMatrix.__truediv__	csb.numeric.InvertibleMatrix-class.html#__truediv__
csb.numeric.InvertibleMatrix.__rmul__	csb.numeric.InvertibleMatrix-class.html#__rmul__
csb.numeric.InvertibleMatrix.__init__	csb.numeric.InvertibleMatrix-class.html#__init__
csb.numeric.InvertibleMatrix.inverse	csb.numeric.InvertibleMatrix-class.html#inverse
csb.numeric.InvertibleMatrix._update_inverse_matrix	csb.numeric.InvertibleMatrix-class.html#_update_inverse_matrix
csb.numeric.InvertibleMatrix._check_unity_multiple	csb.numeric.InvertibleMatrix-class.html#_check_unity_multiple
csb.numeric.InvertibleMatrix.__itruediv__	csb.numeric.InvertibleMatrix-class.html#__itruediv__
csb.numeric.InvertibleMatrix._update_matrix	csb.numeric.InvertibleMatrix-class.html#_update_matrix
csb.numeric.InvertibleMatrix._check_square	csb.numeric.InvertibleMatrix-class.html#_check_square
csb.numeric.InvertibleMatrix.__len__	csb.numeric.InvertibleMatrix-class.html#__len__
csb.numeric.InvertibleMatrix.__mul__	csb.numeric.InvertibleMatrix-class.html#__mul__
csb.numeric.InvertibleMatrix.__getitem__	csb.numeric.InvertibleMatrix-class.html#__getitem__
csb.numeric.InvertibleMatrix.__idiv__	csb.numeric.InvertibleMatrix-class.html#__idiv__
csb.numeric.InvertibleMatrix.__setitem__	csb.numeric.InvertibleMatrix-class.html#__setitem__
csb.numeric.InvertibleMatrix.__eq__	csb.numeric.InvertibleMatrix-class.html#__eq__
csb.numeric.InvertibleMatrix.__imul__	csb.numeric.InvertibleMatrix-class.html#__imul__
csb.numeric.InvertibleMatrix.__array__	csb.numeric.InvertibleMatrix-class.html#__array__
csb.numeric.InvertibleMatrix._check_equal_shape	csb.numeric.InvertibleMatrix-class.html#_check_equal_shape
csb.numeric.InvertibleMatrix.__div__	csb.numeric.InvertibleMatrix-class.html#__div__
csb.numeric.InvertibleMatrix._deprecate_inverse_matrix	csb.numeric.InvertibleMatrix-class.html#_deprecate_inverse_matrix
csb.numeric.InvertibleMatrix.is_unity_multiple	csb.numeric.InvertibleMatrix-class.html#is_unity_multiple
csb.numeric.InvertibleMatrix._check_diagonal	csb.numeric.InvertibleMatrix-class.html#_check_diagonal
csb.numeric.MatrixInitError	csb.numeric.MatrixInitError-class.html
csb.numeric.integrators.AbstractGradient	csb.numeric.integrators.AbstractGradient-class.html
csb.numeric.integrators.AbstractGradient.__metaclass__	abc.ABCMeta-class.html
csb.numeric.integrators.AbstractGradient._abc_negative_cache	csb.numeric.integrators.AbstractGradient-class.html#_abc_negative_cache
csb.numeric.integrators.AbstractGradient._abc_cache	csb.numeric.integrators.AbstractGradient-class.html#_abc_cache
csb.numeric.integrators.AbstractGradient.__abstractmethods__	csb.numeric.integrators.AbstractGradient-class.html#__abstractmethods__
csb.numeric.integrators.AbstractGradient.__call__	csb.numeric.integrators.AbstractGradient-class.html#__call__
csb.numeric.integrators.AbstractGradient.evaluate	csb.numeric.integrators.AbstractGradient-class.html#evaluate
csb.numeric.integrators.AbstractGradient._abc_negative_cache_version	csb.numeric.integrators.AbstractGradient-class.html#_abc_negative_cache_version
csb.numeric.integrators.AbstractGradient._abc_registry	csb.numeric.integrators.AbstractGradient-class.html#_abc_registry
csb.numeric.integrators.AbstractIntegrator	csb.numeric.integrators.AbstractIntegrator-class.html
csb.numeric.integrators.AbstractIntegrator.integrate_once	csb.numeric.integrators.AbstractIntegrator-class.html#integrate_once
csb.numeric.integrators.AbstractIntegrator.__metaclass__	abc.ABCMeta-class.html
csb.numeric.integrators.AbstractIntegrator._get_inverse	csb.numeric.integrators.AbstractIntegrator-class.html#_get_inverse
csb.numeric.integrators.AbstractIntegrator._abc_negative_cache	csb.numeric.integrators.AbstractIntegrator-class.html#_abc_negative_cache
csb.numeric.integrators.AbstractIntegrator.__init__	csb.numeric.integrators.AbstractIntegrator-class.html#__init__
csb.numeric.integrators.AbstractIntegrator._abc_cache	csb.numeric.integrators.AbstractIntegrator-class.html#_abc_cache
csb.numeric.integrators.AbstractIntegrator.__abstractmethods__	csb.numeric.integrators.AbstractIntegrator-class.html#__abstractmethods__
csb.numeric.integrators.AbstractIntegrator.integrate	csb.numeric.integrators.AbstractIntegrator-class.html#integrate
csb.numeric.integrators.AbstractIntegrator._abc_negative_cache_version	csb.numeric.integrators.AbstractIntegrator-class.html#_abc_negative_cache_version
csb.numeric.integrators.AbstractIntegrator._abc_registry	csb.numeric.integrators.AbstractIntegrator-class.html#_abc_registry
csb.numeric.integrators.FastLeapFrog	csb.numeric.integrators.FastLeapFrog-class.html
csb.numeric.integrators.LeapFrog.integrate_once	csb.numeric.integrators.LeapFrog-class.html#integrate_once
csb.numeric.integrators.AbstractIntegrator.__metaclass__	abc.ABCMeta-class.html
csb.numeric.integrators.AbstractIntegrator._get_inverse	csb.numeric.integrators.AbstractIntegrator-class.html#_get_inverse
csb.numeric.integrators.AbstractIntegrator._abc_negative_cache	csb.numeric.integrators.AbstractIntegrator-class.html#_abc_negative_cache
csb.numeric.integrators.AbstractIntegrator.__init__	csb.numeric.integrators.AbstractIntegrator-class.html#__init__
csb.numeric.integrators.AbstractIntegrator._abc_cache	csb.numeric.integrators.AbstractIntegrator-class.html#_abc_cache
csb.numeric.integrators.LeapFrog.__abstractmethods__	csb.numeric.integrators.LeapFrog-class.html#__abstractmethods__
csb.numeric.integrators.FastLeapFrog.integrate	csb.numeric.integrators.FastLeapFrog-class.html#integrate
csb.numeric.integrators.AbstractIntegrator._abc_negative_cache_version	csb.numeric.integrators.AbstractIntegrator-class.html#_abc_negative_cache_version
csb.numeric.integrators.AbstractIntegrator._abc_registry	csb.numeric.integrators.AbstractIntegrator-class.html#_abc_registry
csb.numeric.integrators.LeapFrog	csb.numeric.integrators.LeapFrog-class.html
csb.numeric.integrators.LeapFrog.integrate_once	csb.numeric.integrators.LeapFrog-class.html#integrate_once
csb.numeric.integrators.AbstractIntegrator.__metaclass__	abc.ABCMeta-class.html
csb.numeric.integrators.AbstractIntegrator._get_inverse	csb.numeric.integrators.AbstractIntegrator-class.html#_get_inverse
csb.numeric.integrators.AbstractIntegrator._abc_negative_cache	csb.numeric.integrators.AbstractIntegrator-class.html#_abc_negative_cache
csb.numeric.integrators.AbstractIntegrator.__init__	csb.numeric.integrators.AbstractIntegrator-class.html#__init__
csb.numeric.integrators.AbstractIntegrator._abc_cache	csb.numeric.integrators.AbstractIntegrator-class.html#_abc_cache
csb.numeric.integrators.LeapFrog.__abstractmethods__	csb.numeric.integrators.LeapFrog-class.html#__abstractmethods__
csb.numeric.integrators.AbstractIntegrator.integrate	csb.numeric.integrators.AbstractIntegrator-class.html#integrate
csb.numeric.integrators.AbstractIntegrator._abc_negative_cache_version	csb.numeric.integrators.AbstractIntegrator-class.html#_abc_negative_cache_version
csb.numeric.integrators.AbstractIntegrator._abc_registry	csb.numeric.integrators.AbstractIntegrator-class.html#_abc_registry
csb.numeric.integrators.VelocityVerlet	csb.numeric.integrators.VelocityVerlet-class.html
csb.numeric.integrators.VelocityVerlet.integrate_once	csb.numeric.integrators.VelocityVerlet-class.html#integrate_once
csb.numeric.integrators.AbstractIntegrator.__metaclass__	abc.ABCMeta-class.html
csb.numeric.integrators.AbstractIntegrator._get_inverse	csb.numeric.integrators.AbstractIntegrator-class.html#_get_inverse
csb.numeric.integrators.AbstractIntegrator._abc_negative_cache	csb.numeric.integrators.AbstractIntegrator-class.html#_abc_negative_cache
csb.numeric.integrators.AbstractIntegrator.__init__	csb.numeric.integrators.AbstractIntegrator-class.html#__init__
csb.numeric.integrators.AbstractIntegrator._abc_cache	csb.numeric.integrators.AbstractIntegrator-class.html#_abc_cache
csb.numeric.integrators.VelocityVerlet.__abstractmethods__	csb.numeric.integrators.VelocityVerlet-class.html#__abstractmethods__
csb.numeric.integrators.AbstractIntegrator.integrate	csb.numeric.integrators.AbstractIntegrator-class.html#integrate
csb.numeric.integrators.AbstractIntegrator._abc_negative_cache_version	csb.numeric.integrators.AbstractIntegrator-class.html#_abc_negative_cache_version
csb.numeric.integrators.AbstractIntegrator._abc_registry	csb.numeric.integrators.AbstractIntegrator-class.html#_abc_registry
csb.statistics.Cumulative	csb.statistics.Cumulative-class.html
csb.statistics.Cumulative.cumulative_density	csb.statistics.Cumulative-class.html#cumulative_density
csb.statistics.Cumulative.total_mem	csb.statistics.Cumulative-class.html#total_mem
csb.statistics.Cumulative.__call__	csb.statistics.Cumulative-class.html#__call__
csb.statistics.Cumulative.__init__	csb.statistics.Cumulative-class.html#__init__
csb.statistics.ars.ARS	csb.statistics.ars.ARS-class.html
csb.statistics.ars.ARS.sample	csb.statistics.ars.ARS-class.html#sample
csb.statistics.ars.ARS.initialize	csb.statistics.ars.ARS-class.html#initialize
csb.statistics.ars.ARS.inf	csb.statistics.ars.ARS-class.html#inf
csb.statistics.ars.ARS.__init__	csb.statistics.ars.ARS-class.html#__init__
csb.statistics.ars.Envelope	csb.statistics.ars.Envelope-class.html
csb.statistics.ars.Envelope.u_max	csb.statistics.ars.Envelope-class.html#u_max
csb.statistics.ars.Envelope.sample	csb.statistics.ars.Envelope-class.html#sample
csb.statistics.ars.Envelope.__init__	csb.statistics.ars.Envelope-class.html#__init__
csb.statistics.ars.Envelope.masses	csb.statistics.ars.Envelope-class.html#masses
csb.statistics.ars.Envelope.insert	csb.statistics.ars.Envelope-class.html#insert
csb.statistics.ars.Envelope.l	csb.statistics.ars.Envelope-class.html#l
csb.statistics.ars.Envelope.log_masses	csb.statistics.ars.Envelope-class.html#log_masses
csb.statistics.ars.Envelope.u	csb.statistics.ars.Envelope-class.html#u
csb.statistics.ars.Envelope.z	csb.statistics.ars.Envelope-class.html#z
csb.statistics.ars.Gauss	csb.statistics.ars.Gauss-class.html
csb.statistics.ars.Gauss.__call__	csb.statistics.ars.Gauss-class.html#__call__
csb.statistics.ars.Gauss.__init__	csb.statistics.ars.Gauss-class.html#__init__
csb.statistics.ars.LogProb	csb.statistics.ars.LogProb-class.html
csb.statistics.ars.LogProb.__call__	csb.statistics.ars.LogProb-class.html#__call__
csb.statistics.maxent.MaxentModel	csb.statistics.maxent.MaxentModel-class.html
csb.statistics.maxent.MaxentModel.load	csb.statistics.maxent.MaxentModel-class.html#load
csb.statistics.maxent.MaxentModel.set	csb.statistics.maxent.MaxentModel-class.html#set
csb.statistics.pdf.AbstractDensity.__metaclass__	abc.ABCMeta-class.html
csb.statistics.pdf.AbstractDensity._validate	csb.statistics.pdf.AbstractDensity-class.html#_validate
csb.statistics.pdf.AbstractDensity._abc_negative_cache	csb.statistics.pdf.AbstractDensity-class.html#_abc_negative_cache
csb.statistics.maxent.MaxentModel.energy	csb.statistics.maxent.MaxentModel-class.html#energy
csb.statistics.pdf.AbstractDensity.random	csb.statistics.pdf.AbstractDensity-class.html#random
csb.statistics.maxent.MaxentModel.entropy	csb.statistics.maxent.MaxentModel-class.html#entropy
csb.statistics.maxent.MaxentModel.__init__	csb.statistics.maxent.MaxentModel-class.html#__init__
csb.statistics.maxent.MaxentModel.normalize	csb.statistics.maxent.MaxentModel-class.html#normalize
csb.statistics.maxent.MaxentModel.load_old	csb.statistics.maxent.MaxentModel-class.html#load_old
csb.statistics.maxent.MaxentModel.__abstractmethods__	csb.statistics.maxent.MaxentModel-class.html#__abstractmethods__
csb.statistics.maxent.MaxentModel.sample_weights	csb.statistics.maxent.MaxentModel-class.html#sample_weights
csb.statistics.pdf.AbstractDensity.get_params	csb.statistics.pdf.AbstractDensity-class.html#get_params
csb.statistics.maxent.MaxentModel.log_z	csb.statistics.maxent.MaxentModel-class.html#log_z
csb.statistics.maxent.MaxentModel.prob	csb.statistics.maxent.MaxentModel-class.html#prob
csb.statistics.pdf.AbstractDensity._abc_cache	csb.statistics.pdf.AbstractDensity-class.html#_abc_cache
csb.statistics.pdf.AbstractDensity.__getitem__	csb.statistics.pdf.AbstractDensity-class.html#__getitem__
csb.statistics.maxent.MaxentModel.get	csb.statistics.maxent.MaxentModel-class.html#get
csb.statistics.pdf.AbstractDensity.evaluate	csb.statistics.pdf.AbstractDensity-class.html#evaluate
csb.statistics.maxent.MaxentModel.calculate_statistics	csb.statistics.maxent.MaxentModel-class.html#calculate_statistics
csb.statistics.pdf.AbstractDensity.__call__	csb.statistics.pdf.AbstractDensity-class.html#__call__
csb.statistics.maxent.MaxentModel.beta	csb.statistics.maxent.MaxentModel-class.html#beta
csb.statistics.pdf.AbstractDensity.set_params	csb.statistics.pdf.AbstractDensity-class.html#set_params
csb.statistics.maxent.MaxentModel.log_prob	csb.statistics.maxent.MaxentModel-class.html#log_prob
csb.statistics.pdf.AbstractDensity.estimate	csb.statistics.pdf.AbstractDensity-class.html#estimate
csb.statistics.pdf.AbstractDensity.__str__	csb.statistics.pdf.AbstractDensity-class.html#__str__
csb.statistics.pdf.AbstractDensity.parameters	csb.statistics.pdf.AbstractDensity-class.html#parameters
csb.statistics.pdf.AbstractDensity._register	csb.statistics.pdf.AbstractDensity-class.html#_register
csb.statistics.pdf.AbstractDensity.__setitem__	csb.statistics.pdf.AbstractDensity-class.html#__setitem__
csb.statistics.maxent.MaxentModel.n	csb.statistics.maxent.MaxentModel-class.html#n
csb.statistics.maxent.MaxentModel._periodicities	csb.statistics.maxent.MaxentModel-class.html#_periodicities
csb.statistics.pdf.AbstractDensity.estimator	csb.statistics.pdf.AbstractDensity-class.html#estimator
csb.statistics.pdf.AbstractDensity._abc_negative_cache_version	csb.statistics.pdf.AbstractDensity-class.html#_abc_negative_cache_version
csb.statistics.maxent.MaxentModel.z	csb.statistics.maxent.MaxentModel-class.html#z
csb.statistics.pdf.AbstractDensity._abc_registry	csb.statistics.pdf.AbstractDensity-class.html#_abc_registry
csb.statistics.pdf.BaseDensity._set	csb.statistics.pdf.BaseDensity-class.html#_set
csb.statistics.maxent.MaxentPosterior	csb.statistics.maxent.MaxentPosterior-class.html
csb.statistics.maxent.MaxentPosterior.stats	csb.statistics.maxent.MaxentPosterior-class.html#stats
csb.statistics.maxent.MaxentPosterior.__call__	csb.statistics.maxent.MaxentPosterior-class.html#__call__
csb.statistics.maxent.MaxentPosterior.model	csb.statistics.maxent.MaxentPosterior-class.html#model
csb.statistics.maxent.MaxentPosterior.data	csb.statistics.maxent.MaxentPosterior-class.html#data
csb.statistics.maxent.MaxentPosterior.__init__	csb.statistics.maxent.MaxentPosterior-class.html#__init__
csb.statistics.mixtures.AbstractStructureMixture	csb.statistics.mixtures.AbstractStructureMixture-class.html
csb.statistics.mixtures.GaussianMixture.em	csb.statistics.mixtures.GaussianMixture-class.html#em
csb.statistics.mixtures.AbstractStructureMixture.__metaclass__	abc.ABCMeta-class.html
csb.statistics.mixtures.GaussianMixture.increment_K	csb.statistics.mixtures.GaussianMixture-class.html#increment_K
csb.statistics.mixtures.GaussianMixture.scales	csb.statistics.mixtures.GaussianMixture-class.html#scales
csb.statistics.mixtures.AbstractStructureMixture._abc_negative_cache	csb.statistics.mixtures.AbstractStructureMixture-class.html#_abc_negative_cache
csb.statistics.mixtures.GaussianMixture.estimate_means	csb.statistics.mixtures.GaussianMixture-class.html#estimate_means
csb.statistics.mixtures.GaussianMixture._axis	csb.statistics.mixtures.GaussianMixture-class.html#_axis
csb.statistics.mixtures.AbstractStructureMixture.__init__	csb.statistics.mixtures.AbstractStructureMixture-class.html#__init__
csb.statistics.mixtures.AbstractStructureMixture._abc_cache	csb.statistics.mixtures.AbstractStructureMixture-class.html#_abc_cache
csb.statistics.mixtures.AbstractStructureMixture.__abstractmethods__	csb.statistics.mixtures.AbstractStructureMixture-class.html#__abstractmethods__
csb.statistics.mixtures.GaussianMixture.BIC	csb.statistics.mixtures.GaussianMixture-class.html#BIC
csb.statistics.mixtures.GaussianMixture.overlap	csb.statistics.mixtures.GaussianMixture-class.html#overlap
csb.statistics.mixtures.GaussianMixture.randomize_scales	csb.statistics.mixtures.GaussianMixture-class.html#randomize_scales
csb.statistics.mixtures.GaussianMixture.BETA_SIGMA	csb.statistics.mixtures.GaussianMixture-class.html#BETA_SIGMA
csb.statistics.mixtures.GaussianMixture.series	csb.statistics.mixtures.GaussianMixture-class.html#series
csb.statistics.mixtures.GaussianMixture.new	csb.statistics.mixtures.GaussianMixture-class.html#new
csb.statistics.mixtures.GaussianMixture.anneal	csb.statistics.mixtures.GaussianMixture-class.html#anneal
csb.statistics.mixtures.GaussianMixture.e_step	csb.statistics.mixtures.GaussianMixture-class.html#e_step
csb.statistics.mixtures.GaussianMixture.log_likelihood	csb.statistics.mixtures.GaussianMixture-class.html#log_likelihood
csb.statistics.mixtures.GaussianMixture.ALPHA_SIGMA	csb.statistics.mixtures.GaussianMixture-class.html#ALPHA_SIGMA
csb.statistics.mixtures.GaussianMixture.means	csb.statistics.mixtures.GaussianMixture-class.html#means
csb.statistics.mixtures.AbstractStructureMixture.m_step	csb.statistics.mixtures.AbstractStructureMixture-class.html#m_step
csb.statistics.mixtures.GaussianMixture.MIN_SIGMA	csb.statistics.mixtures.GaussianMixture-class.html#MIN_SIGMA
csb.statistics.mixtures.GaussianMixture.K	csb.statistics.mixtures.GaussianMixture-class.html#K
csb.statistics.mixtures.GaussianMixture.M	csb.statistics.mixtures.GaussianMixture-class.html#M
csb.statistics.mixtures.GaussianMixture.N	csb.statistics.mixtures.GaussianMixture-class.html#N
csb.statistics.mixtures.GaussianMixture.membership	csb.statistics.mixtures.GaussianMixture-class.html#membership
csb.statistics.mixtures.AbstractStructureMixture.R	csb.statistics.mixtures.AbstractStructureMixture-class.html#R
csb.statistics.mixtures.GaussianMixture.delta	csb.statistics.mixtures.GaussianMixture-class.html#delta
csb.statistics.mixtures.GaussianMixture.del_cache	csb.statistics.mixtures.GaussianMixture-class.html#del_cache
csb.statistics.mixtures.GaussianMixture.log_likelihood_reduced	csb.statistics.mixtures.GaussianMixture-class.html#log_likelihood_reduced
csb.statistics.mixtures.GaussianMixture.use_cache	csb.statistics.mixtures.GaussianMixture-class.html#use_cache
csb.statistics.mixtures.AbstractStructureMixture.estimate_T	csb.statistics.mixtures.AbstractStructureMixture-class.html#estimate_T
csb.statistics.mixtures.GaussianMixture.sigma	csb.statistics.mixtures.GaussianMixture-class.html#sigma
csb.statistics.mixtures.GaussianMixture.randomize_means	csb.statistics.mixtures.GaussianMixture-class.html#randomize_means
csb.statistics.mixtures.GaussianMixture.estimate_scales	csb.statistics.mixtures.GaussianMixture-class.html#estimate_scales
csb.statistics.mixtures.AbstractStructureMixture.datapoint	csb.statistics.mixtures.AbstractStructureMixture-class.html#datapoint
csb.statistics.mixtures.AbstractStructureMixture._abc_negative_cache_version	csb.statistics.mixtures.AbstractStructureMixture-class.html#_abc_negative_cache_version
csb.statistics.mixtures.AbstractStructureMixture.t	csb.statistics.mixtures.AbstractStructureMixture-class.html#t
csb.statistics.mixtures.GaussianMixture.w	csb.statistics.mixtures.GaussianMixture-class.html#w
csb.statistics.mixtures.AbstractStructureMixture._abc_registry	csb.statistics.mixtures.AbstractStructureMixture-class.html#_abc_registry
csb.statistics.mixtures.GaussianMixture.dimension	csb.statistics.mixtures.GaussianMixture-class.html#dimension
csb.statistics.mixtures.ConformerMixture	csb.statistics.mixtures.ConformerMixture-class.html
csb.statistics.mixtures.GaussianMixture.em	csb.statistics.mixtures.GaussianMixture-class.html#em
csb.statistics.mixtures.AbstractStructureMixture.__metaclass__	abc.ABCMeta-class.html
csb.statistics.mixtures.GaussianMixture.increment_K	csb.statistics.mixtures.GaussianMixture-class.html#increment_K
csb.statistics.mixtures.GaussianMixture.scales	csb.statistics.mixtures.GaussianMixture-class.html#scales
csb.statistics.mixtures.AbstractStructureMixture._abc_negative_cache	csb.statistics.mixtures.AbstractStructureMixture-class.html#_abc_negative_cache
csb.statistics.mixtures.GaussianMixture.estimate_means	csb.statistics.mixtures.GaussianMixture-class.html#estimate_means
csb.statistics.mixtures.ConformerMixture._axis	csb.statistics.mixtures.ConformerMixture-class.html#_axis
csb.statistics.mixtures.AbstractStructureMixture.__init__	csb.statistics.mixtures.AbstractStructureMixture-class.html#__init__
csb.statistics.mixtures.AbstractStructureMixture._abc_cache	csb.statistics.mixtures.AbstractStructureMixture-class.html#_abc_cache
csb.statistics.mixtures.ConformerMixture.__abstractmethods__	csb.statistics.mixtures.ConformerMixture-class.html#__abstractmethods__
csb.statistics.mixtures.GaussianMixture.BIC	csb.statistics.mixtures.GaussianMixture-class.html#BIC
csb.statistics.mixtures.GaussianMixture.overlap	csb.statistics.mixtures.GaussianMixture-class.html#overlap
csb.statistics.mixtures.GaussianMixture.randomize_scales	csb.statistics.mixtures.GaussianMixture-class.html#randomize_scales
csb.statistics.mixtures.GaussianMixture.BETA_SIGMA	csb.statistics.mixtures.GaussianMixture-class.html#BETA_SIGMA
csb.statistics.mixtures.GaussianMixture.series	csb.statistics.mixtures.GaussianMixture-class.html#series
csb.statistics.mixtures.GaussianMixture.new	csb.statistics.mixtures.GaussianMixture-class.html#new
csb.statistics.mixtures.GaussianMixture.anneal	csb.statistics.mixtures.GaussianMixture-class.html#anneal
csb.statistics.mixtures.GaussianMixture.e_step	csb.statistics.mixtures.GaussianMixture-class.html#e_step
csb.statistics.mixtures.GaussianMixture.log_likelihood	csb.statistics.mixtures.GaussianMixture-class.html#log_likelihood
csb.statistics.mixtures.GaussianMixture.ALPHA_SIGMA	csb.statistics.mixtures.GaussianMixture-class.html#ALPHA_SIGMA
csb.statistics.mixtures.GaussianMixture.means	csb.statistics.mixtures.GaussianMixture-class.html#means
csb.statistics.mixtures.AbstractStructureMixture.m_step	csb.statistics.mixtures.AbstractStructureMixture-class.html#m_step
csb.statistics.mixtures.GaussianMixture.MIN_SIGMA	csb.statistics.mixtures.GaussianMixture-class.html#MIN_SIGMA
csb.statistics.mixtures.GaussianMixture.K	csb.statistics.mixtures.GaussianMixture-class.html#K
csb.statistics.mixtures.GaussianMixture.M	csb.statistics.mixtures.GaussianMixture-class.html#M
csb.statistics.mixtures.GaussianMixture.N	csb.statistics.mixtures.GaussianMixture-class.html#N
csb.statistics.mixtures.GaussianMixture.membership	csb.statistics.mixtures.GaussianMixture-class.html#membership
csb.statistics.mixtures.AbstractStructureMixture.R	csb.statistics.mixtures.AbstractStructureMixture-class.html#R
csb.statistics.mixtures.GaussianMixture.delta	csb.statistics.mixtures.GaussianMixture-class.html#delta
csb.statistics.mixtures.GaussianMixture.del_cache	csb.statistics.mixtures.GaussianMixture-class.html#del_cache
csb.statistics.mixtures.GaussianMixture.log_likelihood_reduced	csb.statistics.mixtures.GaussianMixture-class.html#log_likelihood_reduced
csb.statistics.mixtures.GaussianMixture.use_cache	csb.statistics.mixtures.GaussianMixture-class.html#use_cache
csb.statistics.mixtures.ConformerMixture.estimate_T	csb.statistics.mixtures.ConformerMixture-class.html#estimate_T
csb.statistics.mixtures.GaussianMixture.sigma	csb.statistics.mixtures.GaussianMixture-class.html#sigma
csb.statistics.mixtures.GaussianMixture.randomize_means	csb.statistics.mixtures.GaussianMixture-class.html#randomize_means
csb.statistics.mixtures.GaussianMixture.estimate_scales	csb.statistics.mixtures.GaussianMixture-class.html#estimate_scales
csb.statistics.mixtures.AbstractStructureMixture.datapoint	csb.statistics.mixtures.AbstractStructureMixture-class.html#datapoint
csb.statistics.mixtures.AbstractStructureMixture._abc_negative_cache_version	csb.statistics.mixtures.AbstractStructureMixture-class.html#_abc_negative_cache_version
csb.statistics.mixtures.AbstractStructureMixture.t	csb.statistics.mixtures.AbstractStructureMixture-class.html#t
csb.statistics.mixtures.GaussianMixture.w	csb.statistics.mixtures.GaussianMixture-class.html#w
csb.statistics.mixtures.AbstractStructureMixture._abc_registry	csb.statistics.mixtures.AbstractStructureMixture-class.html#_abc_registry
csb.statistics.mixtures.GaussianMixture.dimension	csb.statistics.mixtures.GaussianMixture-class.html#dimension
csb.statistics.mixtures.GaussianMixture	csb.statistics.mixtures.GaussianMixture-class.html
csb.statistics.mixtures.GaussianMixture.em	csb.statistics.mixtures.GaussianMixture-class.html#em
csb.statistics.mixtures.GaussianMixture.increment_K	csb.statistics.mixtures.GaussianMixture-class.html#increment_K
csb.statistics.mixtures.GaussianMixture.scales	csb.statistics.mixtures.GaussianMixture-class.html#scales
csb.statistics.mixtures.GaussianMixture.series	csb.statistics.mixtures.GaussianMixture-class.html#series
csb.statistics.mixtures.GaussianMixture.estimate_means	csb.statistics.mixtures.GaussianMixture-class.html#estimate_means
csb.statistics.mixtures.GaussianMixture._axis	csb.statistics.mixtures.GaussianMixture-class.html#_axis
csb.statistics.mixtures.GaussianMixture.__init__	csb.statistics.mixtures.GaussianMixture-class.html#__init__
csb.statistics.mixtures.GaussianMixture.e_step	csb.statistics.mixtures.GaussianMixture-class.html#e_step
csb.statistics.mixtures.GaussianMixture.BIC	csb.statistics.mixtures.GaussianMixture-class.html#BIC
csb.statistics.mixtures.GaussianMixture.overlap	csb.statistics.mixtures.GaussianMixture-class.html#overlap
csb.statistics.mixtures.GaussianMixture.randomize_scales	csb.statistics.mixtures.GaussianMixture-class.html#randomize_scales
csb.statistics.mixtures.GaussianMixture.BETA_SIGMA	csb.statistics.mixtures.GaussianMixture-class.html#BETA_SIGMA
csb.statistics.mixtures.GaussianMixture.new	csb.statistics.mixtures.GaussianMixture-class.html#new
csb.statistics.mixtures.GaussianMixture.anneal	csb.statistics.mixtures.GaussianMixture-class.html#anneal
csb.statistics.mixtures.GaussianMixture.log_likelihood	csb.statistics.mixtures.GaussianMixture-class.html#log_likelihood
csb.statistics.mixtures.GaussianMixture.means	csb.statistics.mixtures.GaussianMixture-class.html#means
csb.statistics.mixtures.GaussianMixture.m_step	csb.statistics.mixtures.GaussianMixture-class.html#m_step
csb.statistics.mixtures.GaussianMixture.MIN_SIGMA	csb.statistics.mixtures.GaussianMixture-class.html#MIN_SIGMA
csb.statistics.mixtures.GaussianMixture.K	csb.statistics.mixtures.GaussianMixture-class.html#K
csb.statistics.mixtures.GaussianMixture.M	csb.statistics.mixtures.GaussianMixture-class.html#M
csb.statistics.mixtures.GaussianMixture.N	csb.statistics.mixtures.GaussianMixture-class.html#N
csb.statistics.mixtures.GaussianMixture.membership	csb.statistics.mixtures.GaussianMixture-class.html#membership
csb.statistics.mixtures.GaussianMixture.use_cache	csb.statistics.mixtures.GaussianMixture-class.html#use_cache
csb.statistics.mixtures.GaussianMixture.delta	csb.statistics.mixtures.GaussianMixture-class.html#delta
csb.statistics.mixtures.GaussianMixture.del_cache	csb.statistics.mixtures.GaussianMixture-class.html#del_cache
csb.statistics.mixtures.GaussianMixture.log_likelihood_reduced	csb.statistics.mixtures.GaussianMixture-class.html#log_likelihood_reduced
csb.statistics.mixtures.GaussianMixture.ALPHA_SIGMA	csb.statistics.mixtures.GaussianMixture-class.html#ALPHA_SIGMA
csb.statistics.mixtures.GaussianMixture.randomize_means	csb.statistics.mixtures.GaussianMixture-class.html#randomize_means
csb.statistics.mixtures.GaussianMixture.estimate_scales	csb.statistics.mixtures.GaussianMixture-class.html#estimate_scales
csb.statistics.mixtures.GaussianMixture.datapoint	csb.statistics.mixtures.GaussianMixture-class.html#datapoint
csb.statistics.mixtures.GaussianMixture.w	csb.statistics.mixtures.GaussianMixture-class.html#w
csb.statistics.mixtures.GaussianMixture.sigma	csb.statistics.mixtures.GaussianMixture-class.html#sigma
csb.statistics.mixtures.GaussianMixture.dimension	csb.statistics.mixtures.GaussianMixture-class.html#dimension
csb.statistics.mixtures.SegmentMixture	csb.statistics.mixtures.SegmentMixture-class.html
csb.statistics.mixtures.GaussianMixture.em	csb.statistics.mixtures.GaussianMixture-class.html#em
csb.statistics.mixtures.AbstractStructureMixture.__metaclass__	abc.ABCMeta-class.html
csb.statistics.mixtures.GaussianMixture.increment_K	csb.statistics.mixtures.GaussianMixture-class.html#increment_K
csb.statistics.mixtures.GaussianMixture.scales	csb.statistics.mixtures.GaussianMixture-class.html#scales
csb.statistics.mixtures.AbstractStructureMixture._abc_negative_cache	csb.statistics.mixtures.AbstractStructureMixture-class.html#_abc_negative_cache
csb.statistics.mixtures.SegmentMixture.estimate_means	csb.statistics.mixtures.SegmentMixture-class.html#estimate_means
csb.statistics.mixtures.SegmentMixture._axis	csb.statistics.mixtures.SegmentMixture-class.html#_axis
csb.statistics.mixtures.AbstractStructureMixture.__init__	csb.statistics.mixtures.AbstractStructureMixture-class.html#__init__
csb.statistics.mixtures.AbstractStructureMixture._abc_cache	csb.statistics.mixtures.AbstractStructureMixture-class.html#_abc_cache
csb.statistics.mixtures.SegmentMixture.__abstractmethods__	csb.statistics.mixtures.SegmentMixture-class.html#__abstractmethods__
csb.statistics.mixtures.GaussianMixture.BIC	csb.statistics.mixtures.GaussianMixture-class.html#BIC
csb.statistics.mixtures.GaussianMixture.overlap	csb.statistics.mixtures.GaussianMixture-class.html#overlap
csb.statistics.mixtures.GaussianMixture.randomize_scales	csb.statistics.mixtures.GaussianMixture-class.html#randomize_scales
csb.statistics.mixtures.GaussianMixture.BETA_SIGMA	csb.statistics.mixtures.GaussianMixture-class.html#BETA_SIGMA
csb.statistics.mixtures.GaussianMixture.series	csb.statistics.mixtures.GaussianMixture-class.html#series
csb.statistics.mixtures.GaussianMixture.new	csb.statistics.mixtures.GaussianMixture-class.html#new
csb.statistics.mixtures.GaussianMixture.anneal	csb.statistics.mixtures.GaussianMixture-class.html#anneal
csb.statistics.mixtures.GaussianMixture.e_step	csb.statistics.mixtures.GaussianMixture-class.html#e_step
csb.statistics.mixtures.GaussianMixture.log_likelihood	csb.statistics.mixtures.GaussianMixture-class.html#log_likelihood
csb.statistics.mixtures.GaussianMixture.ALPHA_SIGMA	csb.statistics.mixtures.GaussianMixture-class.html#ALPHA_SIGMA
csb.statistics.mixtures.GaussianMixture.means	csb.statistics.mixtures.GaussianMixture-class.html#means
csb.statistics.mixtures.AbstractStructureMixture.m_step	csb.statistics.mixtures.AbstractStructureMixture-class.html#m_step
csb.statistics.mixtures.GaussianMixture.MIN_SIGMA	csb.statistics.mixtures.GaussianMixture-class.html#MIN_SIGMA
csb.statistics.mixtures.GaussianMixture.K	csb.statistics.mixtures.GaussianMixture-class.html#K
csb.statistics.mixtures.GaussianMixture.M	csb.statistics.mixtures.GaussianMixture-class.html#M
csb.statistics.mixtures.GaussianMixture.N	csb.statistics.mixtures.GaussianMixture-class.html#N
csb.statistics.mixtures.GaussianMixture.membership	csb.statistics.mixtures.GaussianMixture-class.html#membership
csb.statistics.mixtures.AbstractStructureMixture.R	csb.statistics.mixtures.AbstractStructureMixture-class.html#R
csb.statistics.mixtures.GaussianMixture.delta	csb.statistics.mixtures.GaussianMixture-class.html#delta
csb.statistics.mixtures.GaussianMixture.del_cache	csb.statistics.mixtures.GaussianMixture-class.html#del_cache
csb.statistics.mixtures.GaussianMixture.log_likelihood_reduced	csb.statistics.mixtures.GaussianMixture-class.html#log_likelihood_reduced
csb.statistics.mixtures.GaussianMixture.use_cache	csb.statistics.mixtures.GaussianMixture-class.html#use_cache
csb.statistics.mixtures.SegmentMixture.estimate_T	csb.statistics.mixtures.SegmentMixture-class.html#estimate_T
csb.statistics.mixtures.GaussianMixture.sigma	csb.statistics.mixtures.GaussianMixture-class.html#sigma
csb.statistics.mixtures.GaussianMixture.randomize_means	csb.statistics.mixtures.GaussianMixture-class.html#randomize_means
csb.statistics.mixtures.GaussianMixture.estimate_scales	csb.statistics.mixtures.GaussianMixture-class.html#estimate_scales
csb.statistics.mixtures.AbstractStructureMixture.datapoint	csb.statistics.mixtures.AbstractStructureMixture-class.html#datapoint
csb.statistics.mixtures.AbstractStructureMixture._abc_negative_cache_version	csb.statistics.mixtures.AbstractStructureMixture-class.html#_abc_negative_cache_version
csb.statistics.mixtures.AbstractStructureMixture.t	csb.statistics.mixtures.AbstractStructureMixture-class.html#t
csb.statistics.mixtures.GaussianMixture.w	csb.statistics.mixtures.GaussianMixture-class.html#w
csb.statistics.mixtures.AbstractStructureMixture._abc_registry	csb.statistics.mixtures.AbstractStructureMixture-class.html#_abc_registry
csb.statistics.mixtures.GaussianMixture.dimension	csb.statistics.mixtures.GaussianMixture-class.html#dimension
csb.statistics.pdf.AbstractDensity	csb.statistics.pdf.AbstractDensity-class.html
csb.statistics.pdf.AbstractDensity.__metaclass__	abc.ABCMeta-class.html
csb.statistics.pdf.AbstractDensity._validate	csb.statistics.pdf.AbstractDensity-class.html#_validate
csb.statistics.pdf.AbstractDensity._abc_negative_cache	csb.statistics.pdf.AbstractDensity-class.html#_abc_negative_cache
csb.statistics.pdf.AbstractDensity.__str__	csb.statistics.pdf.AbstractDensity-class.html#__str__
csb.statistics.pdf.AbstractDensity.random	csb.statistics.pdf.AbstractDensity-class.html#random
csb.statistics.pdf.AbstractDensity.__init__	csb.statistics.pdf.AbstractDensity-class.html#__init__
csb.statistics.pdf.AbstractDensity._abc_cache	csb.statistics.pdf.AbstractDensity-class.html#_abc_cache
csb.statistics.pdf.AbstractDensity.parameters	csb.statistics.pdf.AbstractDensity-class.html#parameters
csb.statistics.pdf.AbstractDensity.__abstractmethods__	csb.statistics.pdf.AbstractDensity-class.html#__abstractmethods__
csb.statistics.pdf.AbstractDensity.get_params	csb.statistics.pdf.AbstractDensity-class.html#get_params
csb.statistics.pdf.AbstractDensity.__call__	csb.statistics.pdf.AbstractDensity-class.html#__call__
csb.statistics.pdf.AbstractDensity.__getitem__	csb.statistics.pdf.AbstractDensity-class.html#__getitem__
csb.statistics.pdf.AbstractDensity.evaluate	csb.statistics.pdf.AbstractDensity-class.html#evaluate
csb.statistics.pdf.AbstractDensity._register	csb.statistics.pdf.AbstractDensity-class.html#_register
csb.statistics.pdf.AbstractDensity.__setitem__	csb.statistics.pdf.AbstractDensity-class.html#__setitem__
csb.statistics.pdf.AbstractDensity.set_params	csb.statistics.pdf.AbstractDensity-class.html#set_params
csb.statistics.pdf.AbstractDensity.log_prob	csb.statistics.pdf.AbstractDensity-class.html#log_prob
csb.statistics.pdf.AbstractDensity.estimate	csb.statistics.pdf.AbstractDensity-class.html#estimate
csb.statistics.pdf.AbstractDensity.estimator	csb.statistics.pdf.AbstractDensity-class.html#estimator
csb.statistics.pdf.AbstractDensity._abc_negative_cache_version	csb.statistics.pdf.AbstractDensity-class.html#_abc_negative_cache_version
csb.statistics.pdf.AbstractDensity._abc_registry	csb.statistics.pdf.AbstractDensity-class.html#_abc_registry
csb.statistics.pdf.AbstractDensity._set	csb.statistics.pdf.AbstractDensity-class.html#_set
csb.statistics.pdf.AbstractEstimator	csb.statistics.pdf.AbstractEstimator-class.html
csb.statistics.pdf.AbstractEstimator._abc_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_cache
csb.statistics.pdf.AbstractEstimator.__metaclass__	abc.ABCMeta-class.html
csb.statistics.pdf.AbstractEstimator._abc_negative_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache
csb.statistics.pdf.AbstractEstimator.__abstractmethods__	csb.statistics.pdf.AbstractEstimator-class.html#__abstractmethods__
csb.statistics.pdf.AbstractEstimator._abc_negative_cache_version	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache_version
csb.statistics.pdf.AbstractEstimator.estimate	csb.statistics.pdf.AbstractEstimator-class.html#estimate
csb.statistics.pdf.AbstractEstimator._abc_registry	csb.statistics.pdf.AbstractEstimator-class.html#_abc_registry
csb.statistics.pdf.BaseDensity	csb.statistics.pdf.BaseDensity-class.html
csb.statistics.pdf.AbstractDensity.__metaclass__	abc.ABCMeta-class.html
csb.statistics.pdf.AbstractDensity._validate	csb.statistics.pdf.AbstractDensity-class.html#_validate
csb.statistics.pdf.AbstractDensity._abc_negative_cache	csb.statistics.pdf.AbstractDensity-class.html#_abc_negative_cache
csb.statistics.pdf.AbstractDensity.__str__	csb.statistics.pdf.AbstractDensity-class.html#__str__
csb.statistics.pdf.AbstractDensity.random	csb.statistics.pdf.AbstractDensity-class.html#random
csb.statistics.pdf.AbstractDensity.__init__	csb.statistics.pdf.AbstractDensity-class.html#__init__
csb.statistics.pdf.AbstractDensity._abc_cache	csb.statistics.pdf.AbstractDensity-class.html#_abc_cache
csb.statistics.pdf.AbstractDensity.parameters	csb.statistics.pdf.AbstractDensity-class.html#parameters
csb.statistics.pdf.AbstractDensity.__abstractmethods__	csb.statistics.pdf.AbstractDensity-class.html#__abstractmethods__
csb.statistics.pdf.AbstractDensity.get_params	csb.statistics.pdf.AbstractDensity-class.html#get_params
csb.statistics.pdf.AbstractDensity.__call__	csb.statistics.pdf.AbstractDensity-class.html#__call__
csb.statistics.pdf.AbstractDensity.__getitem__	csb.statistics.pdf.AbstractDensity-class.html#__getitem__
csb.statistics.pdf.AbstractDensity.evaluate	csb.statistics.pdf.AbstractDensity-class.html#evaluate
csb.statistics.pdf.AbstractDensity._register	csb.statistics.pdf.AbstractDensity-class.html#_register
csb.statistics.pdf.AbstractDensity.__setitem__	csb.statistics.pdf.AbstractDensity-class.html#__setitem__
csb.statistics.pdf.AbstractDensity.set_params	csb.statistics.pdf.AbstractDensity-class.html#set_params
csb.statistics.pdf.AbstractDensity.log_prob	csb.statistics.pdf.AbstractDensity-class.html#log_prob
csb.statistics.pdf.AbstractDensity.estimate	csb.statistics.pdf.AbstractDensity-class.html#estimate
csb.statistics.pdf.AbstractDensity.estimator	csb.statistics.pdf.AbstractDensity-class.html#estimator
csb.statistics.pdf.AbstractDensity._abc_negative_cache_version	csb.statistics.pdf.AbstractDensity-class.html#_abc_negative_cache_version
csb.statistics.pdf.AbstractDensity._abc_registry	csb.statistics.pdf.AbstractDensity-class.html#_abc_registry
csb.statistics.pdf.BaseDensity._set	csb.statistics.pdf.BaseDensity-class.html#_set
csb.statistics.pdf.Dirichlet	csb.statistics.pdf.Dirichlet-class.html
csb.statistics.pdf.AbstractDensity.__metaclass__	abc.ABCMeta-class.html
csb.statistics.pdf.AbstractDensity._validate	csb.statistics.pdf.AbstractDensity-class.html#_validate
csb.statistics.pdf.AbstractDensity._abc_negative_cache	csb.statistics.pdf.AbstractDensity-class.html#_abc_negative_cache
csb.statistics.pdf.AbstractDensity.__str__	csb.statistics.pdf.AbstractDensity-class.html#__str__
csb.statistics.pdf.Dirichlet.random	csb.statistics.pdf.Dirichlet-class.html#random
csb.statistics.pdf.Dirichlet.__init__	csb.statistics.pdf.Dirichlet-class.html#__init__
csb.statistics.pdf.AbstractDensity._abc_cache	csb.statistics.pdf.AbstractDensity-class.html#_abc_cache
csb.statistics.pdf.AbstractDensity.parameters	csb.statistics.pdf.AbstractDensity-class.html#parameters
csb.statistics.pdf.Dirichlet.__abstractmethods__	csb.statistics.pdf.Dirichlet-class.html#__abstractmethods__
csb.statistics.pdf.AbstractDensity.get_params	csb.statistics.pdf.AbstractDensity-class.html#get_params
csb.statistics.pdf.AbstractDensity.__call__	csb.statistics.pdf.AbstractDensity-class.html#__call__
csb.statistics.pdf.AbstractDensity.__getitem__	csb.statistics.pdf.AbstractDensity-class.html#__getitem__
csb.statistics.pdf.AbstractDensity.evaluate	csb.statistics.pdf.AbstractDensity-class.html#evaluate
csb.statistics.pdf.AbstractDensity._register	csb.statistics.pdf.AbstractDensity-class.html#_register
csb.statistics.pdf.AbstractDensity.__setitem__	csb.statistics.pdf.AbstractDensity-class.html#__setitem__
csb.statistics.pdf.AbstractDensity.set_params	csb.statistics.pdf.AbstractDensity-class.html#set_params
csb.statistics.pdf.Dirichlet.log_prob	csb.statistics.pdf.Dirichlet-class.html#log_prob
csb.statistics.pdf.Dirichlet.alpha	csb.statistics.pdf.Dirichlet-class.html#alpha
csb.statistics.pdf.AbstractDensity.estimate	csb.statistics.pdf.AbstractDensity-class.html#estimate
csb.statistics.pdf.AbstractDensity.estimator	csb.statistics.pdf.AbstractDensity-class.html#estimator
csb.statistics.pdf.AbstractDensity._abc_negative_cache_version	csb.statistics.pdf.AbstractDensity-class.html#_abc_negative_cache_version
csb.statistics.pdf.AbstractDensity._abc_registry	csb.statistics.pdf.AbstractDensity-class.html#_abc_registry
csb.statistics.pdf.BaseDensity._set	csb.statistics.pdf.BaseDensity-class.html#_set
csb.statistics.pdf.DirichletEstimator	csb.statistics.pdf.DirichletEstimator-class.html
csb.statistics.pdf.AbstractEstimator._abc_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_cache
csb.statistics.pdf.AbstractEstimator.__metaclass__	abc.ABCMeta-class.html
csb.statistics.pdf.AbstractEstimator._abc_negative_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache
csb.statistics.pdf.DirichletEstimator.__abstractmethods__	csb.statistics.pdf.DirichletEstimator-class.html#__abstractmethods__
csb.statistics.pdf.AbstractEstimator._abc_negative_cache_version	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache_version
csb.statistics.pdf.DirichletEstimator.estimate	csb.statistics.pdf.DirichletEstimator-class.html#estimate
csb.statistics.pdf.AbstractEstimator._abc_registry	csb.statistics.pdf.AbstractEstimator-class.html#_abc_registry
csb.statistics.pdf.DirichletEstimator.__init__	csb.statistics.pdf.DirichletEstimator-class.html#__init__
csb.statistics.pdf.EstimationFailureError	csb.statistics.pdf.EstimationFailureError-class.html
csb.statistics.pdf.ParameterValueError.__str__	csb.statistics.pdf.ParameterValueError-class.html#__str__
csb.statistics.pdf.ParameterValueError.__init__	csb.statistics.pdf.ParameterValueError-class.html#__init__
csb.statistics.pdf.Gamma	csb.statistics.pdf.Gamma-class.html
csb.statistics.pdf.AbstractDensity.__metaclass__	abc.ABCMeta-class.html
csb.statistics.pdf.Gamma._validate	csb.statistics.pdf.Gamma-class.html#_validate
csb.statistics.pdf.AbstractDensity._abc_negative_cache	csb.statistics.pdf.AbstractDensity-class.html#_abc_negative_cache
csb.statistics.pdf.AbstractDensity.__str__	csb.statistics.pdf.AbstractDensity-class.html#__str__
csb.statistics.pdf.Gamma.random	csb.statistics.pdf.Gamma-class.html#random
csb.statistics.pdf.Gamma.__init__	csb.statistics.pdf.Gamma-class.html#__init__
csb.statistics.pdf.AbstractDensity._abc_cache	csb.statistics.pdf.AbstractDensity-class.html#_abc_cache
csb.statistics.pdf.AbstractDensity.parameters	csb.statistics.pdf.AbstractDensity-class.html#parameters
csb.statistics.pdf.Gamma.__abstractmethods__	csb.statistics.pdf.Gamma-class.html#__abstractmethods__
csb.statistics.pdf.AbstractDensity.get_params	csb.statistics.pdf.AbstractDensity-class.html#get_params
csb.statistics.pdf.AbstractDensity.__call__	csb.statistics.pdf.AbstractDensity-class.html#__call__
csb.statistics.pdf.AbstractDensity.__getitem__	csb.statistics.pdf.AbstractDensity-class.html#__getitem__
csb.statistics.pdf.AbstractDensity.evaluate	csb.statistics.pdf.AbstractDensity-class.html#evaluate
csb.statistics.pdf.AbstractDensity._register	csb.statistics.pdf.AbstractDensity-class.html#_register
csb.statistics.pdf.AbstractDensity.__setitem__	csb.statistics.pdf.AbstractDensity-class.html#__setitem__
csb.statistics.pdf.AbstractDensity.set_params	csb.statistics.pdf.AbstractDensity-class.html#set_params
csb.statistics.pdf.Gamma.log_prob	csb.statistics.pdf.Gamma-class.html#log_prob
csb.statistics.pdf.Gamma.alpha	csb.statistics.pdf.Gamma-class.html#alpha
csb.statistics.pdf.AbstractDensity.estimate	csb.statistics.pdf.AbstractDensity-class.html#estimate
csb.statistics.pdf.Gamma.beta	csb.statistics.pdf.Gamma-class.html#beta
csb.statistics.pdf.AbstractDensity.estimator	csb.statistics.pdf.AbstractDensity-class.html#estimator
csb.statistics.pdf.AbstractDensity._abc_negative_cache_version	csb.statistics.pdf.AbstractDensity-class.html#_abc_negative_cache_version
csb.statistics.pdf.AbstractDensity._abc_registry	csb.statistics.pdf.AbstractDensity-class.html#_abc_registry
csb.statistics.pdf.BaseDensity._set	csb.statistics.pdf.BaseDensity-class.html#_set
csb.statistics.pdf.GammaMLEstimator	csb.statistics.pdf.GammaMLEstimator-class.html
csb.statistics.pdf.AbstractEstimator._abc_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_cache
csb.statistics.pdf.AbstractEstimator.__metaclass__	abc.ABCMeta-class.html
csb.statistics.pdf.AbstractEstimator._abc_negative_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache
csb.statistics.pdf.GammaMLEstimator.__abstractmethods__	csb.statistics.pdf.GammaMLEstimator-class.html#__abstractmethods__
csb.statistics.pdf.AbstractEstimator._abc_negative_cache_version	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache_version
csb.statistics.pdf.GammaMLEstimator.estimate	csb.statistics.pdf.GammaMLEstimator-class.html#estimate
csb.statistics.pdf.AbstractEstimator._abc_registry	csb.statistics.pdf.AbstractEstimator-class.html#_abc_registry
csb.statistics.pdf.GammaMLEstimator.__init__	csb.statistics.pdf.GammaMLEstimator-class.html#__init__
csb.statistics.pdf.GaussianMLEstimator	csb.statistics.pdf.GaussianMLEstimator-class.html
csb.statistics.pdf.AbstractEstimator._abc_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_cache
csb.statistics.pdf.AbstractEstimator.__metaclass__	abc.ABCMeta-class.html
csb.statistics.pdf.AbstractEstimator._abc_negative_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache
csb.statistics.pdf.GaussianMLEstimator.__abstractmethods__	csb.statistics.pdf.GaussianMLEstimator-class.html#__abstractmethods__
csb.statistics.pdf.AbstractEstimator._abc_negative_cache_version	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache_version
csb.statistics.pdf.GaussianMLEstimator.estimate	csb.statistics.pdf.GaussianMLEstimator-class.html#estimate
csb.statistics.pdf.AbstractEstimator._abc_registry	csb.statistics.pdf.AbstractEstimator-class.html#_abc_registry
csb.statistics.pdf.GenNormalBruteForceEstimator	csb.statistics.pdf.GenNormalBruteForceEstimator-class.html
csb.statistics.pdf.AbstractEstimator.__metaclass__	abc.ABCMeta-class.html
csb.statistics.pdf.AbstractEstimator._abc_negative_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache
csb.statistics.pdf.GenNormalBruteForceEstimator.__init__	csb.statistics.pdf.GenNormalBruteForceEstimator-class.html#__init__
csb.statistics.pdf.AbstractEstimator._abc_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_cache
csb.statistics.pdf.GenNormalBruteForceEstimator.__abstractmethods__	csb.statistics.pdf.GenNormalBruteForceEstimator-class.html#__abstractmethods__
csb.statistics.pdf.GenNormalBruteForceEstimator.update	csb.statistics.pdf.GenNormalBruteForceEstimator-class.html#update
csb.statistics.pdf.GenNormalBruteForceEstimator.estimate	csb.statistics.pdf.GenNormalBruteForceEstimator-class.html#estimate
csb.statistics.pdf.GenNormalBruteForceEstimator.estimate_with_fixed_beta	csb.statistics.pdf.GenNormalBruteForceEstimator-class.html#estimate_with_fixed_beta
csb.statistics.pdf.AbstractEstimator._abc_negative_cache_version	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache_version
csb.statistics.pdf.AbstractEstimator._abc_registry	csb.statistics.pdf.AbstractEstimator-class.html#_abc_registry
csb.statistics.pdf.GeneralizedInverseGaussian	csb.statistics.pdf.GeneralizedInverseGaussian-class.html
csb.statistics.pdf.AbstractDensity.__metaclass__	abc.ABCMeta-class.html
csb.statistics.pdf.GeneralizedInverseGaussian._validate	csb.statistics.pdf.GeneralizedInverseGaussian-class.html#_validate
csb.statistics.pdf.AbstractDensity._abc_negative_cache	csb.statistics.pdf.AbstractDensity-class.html#_abc_negative_cache
csb.statistics.pdf.AbstractDensity.__str__	csb.statistics.pdf.AbstractDensity-class.html#__str__
csb.statistics.pdf.GeneralizedInverseGaussian.random	csb.statistics.pdf.GeneralizedInverseGaussian-class.html#random
csb.statistics.pdf.GeneralizedInverseGaussian.__init__	csb.statistics.pdf.GeneralizedInverseGaussian-class.html#__init__
csb.statistics.pdf.AbstractDensity._abc_cache	csb.statistics.pdf.AbstractDensity-class.html#_abc_cache
csb.statistics.pdf.AbstractDensity.parameters	csb.statistics.pdf.AbstractDensity-class.html#parameters
csb.statistics.pdf.GeneralizedInverseGaussian.__abstractmethods__	csb.statistics.pdf.GeneralizedInverseGaussian-class.html#__abstractmethods__
csb.statistics.pdf.AbstractDensity.get_params	csb.statistics.pdf.AbstractDensity-class.html#get_params
csb.statistics.pdf.AbstractDensity.__call__	csb.statistics.pdf.AbstractDensity-class.html#__call__
csb.statistics.pdf.AbstractDensity.__getitem__	csb.statistics.pdf.AbstractDensity-class.html#__getitem__
csb.statistics.pdf.AbstractDensity.evaluate	csb.statistics.pdf.AbstractDensity-class.html#evaluate
csb.statistics.pdf.AbstractDensity._register	csb.statistics.pdf.AbstractDensity-class.html#_register
csb.statistics.pdf.AbstractDensity.__setitem__	csb.statistics.pdf.AbstractDensity-class.html#__setitem__
csb.statistics.pdf.AbstractDensity.set_params	csb.statistics.pdf.AbstractDensity-class.html#set_params
csb.statistics.pdf.GeneralizedInverseGaussian.log_prob	csb.statistics.pdf.GeneralizedInverseGaussian-class.html#log_prob
csb.statistics.pdf.AbstractDensity.estimate	csb.statistics.pdf.AbstractDensity-class.html#estimate
csb.statistics.pdf.GeneralizedInverseGaussian.a	csb.statistics.pdf.GeneralizedInverseGaussian-class.html#a
csb.statistics.pdf.GeneralizedInverseGaussian.b	csb.statistics.pdf.GeneralizedInverseGaussian-class.html#b
csb.statistics.pdf.GeneralizedInverseGaussian.p	csb.statistics.pdf.GeneralizedInverseGaussian-class.html#p
csb.statistics.pdf.AbstractDensity.estimator	csb.statistics.pdf.AbstractDensity-class.html#estimator
csb.statistics.pdf.AbstractDensity._abc_negative_cache_version	csb.statistics.pdf.AbstractDensity-class.html#_abc_negative_cache_version
csb.statistics.pdf.AbstractDensity._abc_registry	csb.statistics.pdf.AbstractDensity-class.html#_abc_registry
csb.statistics.pdf.BaseDensity._set	csb.statistics.pdf.BaseDensity-class.html#_set
csb.statistics.pdf.GeneralizedNormal	csb.statistics.pdf.GeneralizedNormal-class.html
csb.statistics.pdf.AbstractDensity.__metaclass__	abc.ABCMeta-class.html
csb.statistics.pdf.GeneralizedNormal._validate	csb.statistics.pdf.GeneralizedNormal-class.html#_validate
csb.statistics.pdf.AbstractDensity._abc_negative_cache	csb.statistics.pdf.AbstractDensity-class.html#_abc_negative_cache
csb.statistics.pdf.AbstractDensity.__str__	csb.statistics.pdf.AbstractDensity-class.html#__str__
csb.statistics.pdf.AbstractDensity.random	csb.statistics.pdf.AbstractDensity-class.html#random
csb.statistics.pdf.GeneralizedNormal.__init__	csb.statistics.pdf.GeneralizedNormal-class.html#__init__
csb.statistics.pdf.AbstractDensity._abc_cache	csb.statistics.pdf.AbstractDensity-class.html#_abc_cache
csb.statistics.pdf.AbstractDensity.parameters	csb.statistics.pdf.AbstractDensity-class.html#parameters
csb.statistics.pdf.GeneralizedNormal.__abstractmethods__	csb.statistics.pdf.GeneralizedNormal-class.html#__abstractmethods__
csb.statistics.pdf.AbstractDensity.get_params	csb.statistics.pdf.AbstractDensity-class.html#get_params
csb.statistics.pdf.AbstractDensity.__call__	csb.statistics.pdf.AbstractDensity-class.html#__call__
csb.statistics.pdf.AbstractDensity.__getitem__	csb.statistics.pdf.AbstractDensity-class.html#__getitem__
csb.statistics.pdf.AbstractDensity.evaluate	csb.statistics.pdf.AbstractDensity-class.html#evaluate
csb.statistics.pdf.AbstractDensity._register	csb.statistics.pdf.AbstractDensity-class.html#_register
csb.statistics.pdf.AbstractDensity.__setitem__	csb.statistics.pdf.AbstractDensity-class.html#__setitem__
csb.statistics.pdf.AbstractDensity.set_params	csb.statistics.pdf.AbstractDensity-class.html#set_params
csb.statistics.pdf.GeneralizedNormal.log_prob	csb.statistics.pdf.GeneralizedNormal-class.html#log_prob
csb.statistics.pdf.GeneralizedNormal.alpha	csb.statistics.pdf.GeneralizedNormal-class.html#alpha
csb.statistics.pdf.AbstractDensity.estimate	csb.statistics.pdf.AbstractDensity-class.html#estimate
csb.statistics.pdf.GeneralizedNormal.beta	csb.statistics.pdf.GeneralizedNormal-class.html#beta
csb.statistics.pdf.GeneralizedNormal.mu	csb.statistics.pdf.GeneralizedNormal-class.html#mu
csb.statistics.pdf.AbstractDensity.estimator	csb.statistics.pdf.AbstractDensity-class.html#estimator
csb.statistics.pdf.AbstractDensity._abc_negative_cache_version	csb.statistics.pdf.AbstractDensity-class.html#_abc_negative_cache_version
csb.statistics.pdf.AbstractDensity._abc_registry	csb.statistics.pdf.AbstractDensity-class.html#_abc_registry
csb.statistics.pdf.BaseDensity._set	csb.statistics.pdf.BaseDensity-class.html#_set
csb.statistics.pdf.GumbelMaxMomentsEstimator	csb.statistics.pdf.GumbelMaxMomentsEstimator-class.html
csb.statistics.pdf.AbstractEstimator._abc_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_cache
csb.statistics.pdf.AbstractEstimator.__metaclass__	abc.ABCMeta-class.html
csb.statistics.pdf.AbstractEstimator._abc_negative_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache
csb.statistics.pdf.GumbelMaxMomentsEstimator.__abstractmethods__	csb.statistics.pdf.GumbelMaxMomentsEstimator-class.html#__abstractmethods__
csb.statistics.pdf.AbstractEstimator._abc_negative_cache_version	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache_version
csb.statistics.pdf.GumbelMaxMomentsEstimator.estimate	csb.statistics.pdf.GumbelMaxMomentsEstimator-class.html#estimate
csb.statistics.pdf.AbstractEstimator._abc_registry	csb.statistics.pdf.AbstractEstimator-class.html#_abc_registry
csb.statistics.pdf.GumbelMaximum	csb.statistics.pdf.GumbelMaximum-class.html
csb.statistics.pdf.AbstractDensity.__metaclass__	abc.ABCMeta-class.html
csb.statistics.pdf.GumbelMinimum._validate	csb.statistics.pdf.GumbelMinimum-class.html#_validate
csb.statistics.pdf.AbstractDensity._abc_negative_cache	csb.statistics.pdf.AbstractDensity-class.html#_abc_negative_cache
csb.statistics.pdf.AbstractDensity.__str__	csb.statistics.pdf.AbstractDensity-class.html#__str__
csb.statistics.pdf.GumbelMaximum.random	csb.statistics.pdf.GumbelMaximum-class.html#random
csb.statistics.pdf.GumbelMaximum.__init__	csb.statistics.pdf.GumbelMaximum-class.html#__init__
csb.statistics.pdf.AbstractDensity._abc_cache	csb.statistics.pdf.AbstractDensity-class.html#_abc_cache
csb.statistics.pdf.AbstractDensity.parameters	csb.statistics.pdf.AbstractDensity-class.html#parameters
csb.statistics.pdf.GumbelMinimum.__abstractmethods__	csb.statistics.pdf.GumbelMinimum-class.html#__abstractmethods__
csb.statistics.pdf.AbstractDensity.get_params	csb.statistics.pdf.AbstractDensity-class.html#get_params
csb.statistics.pdf.AbstractDensity.__call__	csb.statistics.pdf.AbstractDensity-class.html#__call__
csb.statistics.pdf.AbstractDensity.__getitem__	csb.statistics.pdf.AbstractDensity-class.html#__getitem__
csb.statistics.pdf.AbstractDensity.evaluate	csb.statistics.pdf.AbstractDensity-class.html#evaluate
csb.statistics.pdf.AbstractDensity._register	csb.statistics.pdf.AbstractDensity-class.html#_register
csb.statistics.pdf.AbstractDensity.__setitem__	csb.statistics.pdf.AbstractDensity-class.html#__setitem__
csb.statistics.pdf.AbstractDensity.set_params	csb.statistics.pdf.AbstractDensity-class.html#set_params
csb.statistics.pdf.GumbelMaximum.log_prob	csb.statistics.pdf.GumbelMaximum-class.html#log_prob
csb.statistics.pdf.AbstractDensity.estimate	csb.statistics.pdf.AbstractDensity-class.html#estimate
csb.statistics.pdf.GumbelMinimum.beta	csb.statistics.pdf.GumbelMinimum-class.html#beta
csb.statistics.pdf.GumbelMinimum.mu	csb.statistics.pdf.GumbelMinimum-class.html#mu
csb.statistics.pdf.AbstractDensity.estimator	csb.statistics.pdf.AbstractDensity-class.html#estimator
csb.statistics.pdf.AbstractDensity._abc_negative_cache_version	csb.statistics.pdf.AbstractDensity-class.html#_abc_negative_cache_version
csb.statistics.pdf.AbstractDensity._abc_registry	csb.statistics.pdf.AbstractDensity-class.html#_abc_registry
csb.statistics.pdf.BaseDensity._set	csb.statistics.pdf.BaseDensity-class.html#_set
csb.statistics.pdf.GumbelMinMomentsEstimator	csb.statistics.pdf.GumbelMinMomentsEstimator-class.html
csb.statistics.pdf.AbstractEstimator._abc_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_cache
csb.statistics.pdf.AbstractEstimator.__metaclass__	abc.ABCMeta-class.html
csb.statistics.pdf.AbstractEstimator._abc_negative_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache
csb.statistics.pdf.GumbelMinMomentsEstimator.__abstractmethods__	csb.statistics.pdf.GumbelMinMomentsEstimator-class.html#__abstractmethods__
csb.statistics.pdf.AbstractEstimator._abc_negative_cache_version	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache_version
csb.statistics.pdf.GumbelMinMomentsEstimator.estimate	csb.statistics.pdf.GumbelMinMomentsEstimator-class.html#estimate
csb.statistics.pdf.AbstractEstimator._abc_registry	csb.statistics.pdf.AbstractEstimator-class.html#_abc_registry
csb.statistics.pdf.GumbelMinimum	csb.statistics.pdf.GumbelMinimum-class.html
csb.statistics.pdf.AbstractDensity.__metaclass__	abc.ABCMeta-class.html
csb.statistics.pdf.GumbelMinimum._validate	csb.statistics.pdf.GumbelMinimum-class.html#_validate
csb.statistics.pdf.AbstractDensity._abc_negative_cache	csb.statistics.pdf.AbstractDensity-class.html#_abc_negative_cache
csb.statistics.pdf.AbstractDensity.__str__	csb.statistics.pdf.AbstractDensity-class.html#__str__
csb.statistics.pdf.GumbelMinimum.random	csb.statistics.pdf.GumbelMinimum-class.html#random
csb.statistics.pdf.GumbelMinimum.__init__	csb.statistics.pdf.GumbelMinimum-class.html#__init__
csb.statistics.pdf.AbstractDensity._abc_cache	csb.statistics.pdf.AbstractDensity-class.html#_abc_cache
csb.statistics.pdf.AbstractDensity.parameters	csb.statistics.pdf.AbstractDensity-class.html#parameters
csb.statistics.pdf.GumbelMinimum.__abstractmethods__	csb.statistics.pdf.GumbelMinimum-class.html#__abstractmethods__
csb.statistics.pdf.AbstractDensity.get_params	csb.statistics.pdf.AbstractDensity-class.html#get_params
csb.statistics.pdf.AbstractDensity.__call__	csb.statistics.pdf.AbstractDensity-class.html#__call__
csb.statistics.pdf.AbstractDensity.__getitem__	csb.statistics.pdf.AbstractDensity-class.html#__getitem__
csb.statistics.pdf.AbstractDensity.evaluate	csb.statistics.pdf.AbstractDensity-class.html#evaluate
csb.statistics.pdf.AbstractDensity._register	csb.statistics.pdf.AbstractDensity-class.html#_register
csb.statistics.pdf.AbstractDensity.__setitem__	csb.statistics.pdf.AbstractDensity-class.html#__setitem__
csb.statistics.pdf.AbstractDensity.set_params	csb.statistics.pdf.AbstractDensity-class.html#set_params
csb.statistics.pdf.GumbelMinimum.log_prob	csb.statistics.pdf.GumbelMinimum-class.html#log_prob
csb.statistics.pdf.AbstractDensity.estimate	csb.statistics.pdf.AbstractDensity-class.html#estimate
csb.statistics.pdf.GumbelMinimum.beta	csb.statistics.pdf.GumbelMinimum-class.html#beta
csb.statistics.pdf.GumbelMinimum.mu	csb.statistics.pdf.GumbelMinimum-class.html#mu
csb.statistics.pdf.AbstractDensity.estimator	csb.statistics.pdf.AbstractDensity-class.html#estimator
csb.statistics.pdf.AbstractDensity._abc_negative_cache_version	csb.statistics.pdf.AbstractDensity-class.html#_abc_negative_cache_version
csb.statistics.pdf.AbstractDensity._abc_registry	csb.statistics.pdf.AbstractDensity-class.html#_abc_registry
csb.statistics.pdf.BaseDensity._set	csb.statistics.pdf.BaseDensity-class.html#_set
csb.statistics.pdf.IncompatibleEstimatorError	csb.statistics.pdf.IncompatibleEstimatorError-class.html
csb.statistics.pdf.InverseGamma	csb.statistics.pdf.InverseGamma-class.html
csb.statistics.pdf.AbstractDensity.__metaclass__	abc.ABCMeta-class.html
csb.statistics.pdf.InverseGamma._validate	csb.statistics.pdf.InverseGamma-class.html#_validate
csb.statistics.pdf.AbstractDensity._abc_negative_cache	csb.statistics.pdf.AbstractDensity-class.html#_abc_negative_cache
csb.statistics.pdf.AbstractDensity.__str__	csb.statistics.pdf.AbstractDensity-class.html#__str__
csb.statistics.pdf.InverseGamma.random	csb.statistics.pdf.InverseGamma-class.html#random
csb.statistics.pdf.InverseGamma.__init__	csb.statistics.pdf.InverseGamma-class.html#__init__
csb.statistics.pdf.AbstractDensity._abc_cache	csb.statistics.pdf.AbstractDensity-class.html#_abc_cache
csb.statistics.pdf.AbstractDensity.parameters	csb.statistics.pdf.AbstractDensity-class.html#parameters
csb.statistics.pdf.InverseGamma.__abstractmethods__	csb.statistics.pdf.InverseGamma-class.html#__abstractmethods__
csb.statistics.pdf.AbstractDensity.get_params	csb.statistics.pdf.AbstractDensity-class.html#get_params
csb.statistics.pdf.AbstractDensity.__call__	csb.statistics.pdf.AbstractDensity-class.html#__call__
csb.statistics.pdf.AbstractDensity.__getitem__	csb.statistics.pdf.AbstractDensity-class.html#__getitem__
csb.statistics.pdf.AbstractDensity.evaluate	csb.statistics.pdf.AbstractDensity-class.html#evaluate
csb.statistics.pdf.AbstractDensity._register	csb.statistics.pdf.AbstractDensity-class.html#_register
csb.statistics.pdf.AbstractDensity.__setitem__	csb.statistics.pdf.AbstractDensity-class.html#__setitem__
csb.statistics.pdf.AbstractDensity.set_params	csb.statistics.pdf.AbstractDensity-class.html#set_params
csb.statistics.pdf.InverseGamma.log_prob	csb.statistics.pdf.InverseGamma-class.html#log_prob
csb.statistics.pdf.InverseGamma.alpha	csb.statistics.pdf.InverseGamma-class.html#alpha
csb.statistics.pdf.AbstractDensity.estimate	csb.statistics.pdf.AbstractDensity-class.html#estimate
csb.statistics.pdf.InverseGamma.beta	csb.statistics.pdf.InverseGamma-class.html#beta
csb.statistics.pdf.AbstractDensity.estimator	csb.statistics.pdf.AbstractDensity-class.html#estimator
csb.statistics.pdf.AbstractDensity._abc_negative_cache_version	csb.statistics.pdf.AbstractDensity-class.html#_abc_negative_cache_version
csb.statistics.pdf.AbstractDensity._abc_registry	csb.statistics.pdf.AbstractDensity-class.html#_abc_registry
csb.statistics.pdf.BaseDensity._set	csb.statistics.pdf.BaseDensity-class.html#_set
csb.statistics.pdf.InverseGaussian	csb.statistics.pdf.InverseGaussian-class.html
csb.statistics.pdf.AbstractDensity.__metaclass__	abc.ABCMeta-class.html
csb.statistics.pdf.InverseGaussian._validate	csb.statistics.pdf.InverseGaussian-class.html#_validate
csb.statistics.pdf.AbstractDensity._abc_negative_cache	csb.statistics.pdf.AbstractDensity-class.html#_abc_negative_cache
csb.statistics.pdf.AbstractDensity.__str__	csb.statistics.pdf.AbstractDensity-class.html#__str__
csb.statistics.pdf.InverseGaussian.random	csb.statistics.pdf.InverseGaussian-class.html#random
csb.statistics.pdf.InverseGaussian.shape	csb.statistics.pdf.InverseGaussian-class.html#shape
csb.statistics.pdf.InverseGaussian.__init__	csb.statistics.pdf.InverseGaussian-class.html#__init__
csb.statistics.pdf.AbstractDensity._abc_cache	csb.statistics.pdf.AbstractDensity-class.html#_abc_cache
csb.statistics.pdf.AbstractDensity.parameters	csb.statistics.pdf.AbstractDensity-class.html#parameters
csb.statistics.pdf.InverseGaussian.__abstractmethods__	csb.statistics.pdf.InverseGaussian-class.html#__abstractmethods__
csb.statistics.pdf.AbstractDensity.get_params	csb.statistics.pdf.AbstractDensity-class.html#get_params
csb.statistics.pdf.AbstractDensity.__call__	csb.statistics.pdf.AbstractDensity-class.html#__call__
csb.statistics.pdf.AbstractDensity.__getitem__	csb.statistics.pdf.AbstractDensity-class.html#__getitem__
csb.statistics.pdf.AbstractDensity.evaluate	csb.statistics.pdf.AbstractDensity-class.html#evaluate
csb.statistics.pdf.AbstractDensity._register	csb.statistics.pdf.AbstractDensity-class.html#_register
csb.statistics.pdf.AbstractDensity.__setitem__	csb.statistics.pdf.AbstractDensity-class.html#__setitem__
csb.statistics.pdf.AbstractDensity.set_params	csb.statistics.pdf.AbstractDensity-class.html#set_params
csb.statistics.pdf.InverseGaussian.log_prob	csb.statistics.pdf.InverseGaussian-class.html#log_prob
csb.statistics.pdf.AbstractDensity.estimate	csb.statistics.pdf.AbstractDensity-class.html#estimate
csb.statistics.pdf.InverseGaussian.mu	csb.statistics.pdf.InverseGaussian-class.html#mu
csb.statistics.pdf.AbstractDensity.estimator	csb.statistics.pdf.AbstractDensity-class.html#estimator
csb.statistics.pdf.AbstractDensity._abc_negative_cache_version	csb.statistics.pdf.AbstractDensity-class.html#_abc_negative_cache_version
csb.statistics.pdf.AbstractDensity._abc_registry	csb.statistics.pdf.AbstractDensity-class.html#_abc_registry
csb.statistics.pdf.BaseDensity._set	csb.statistics.pdf.BaseDensity-class.html#_set
csb.statistics.pdf.InverseGaussianMLEstimator	csb.statistics.pdf.InverseGaussianMLEstimator-class.html
csb.statistics.pdf.AbstractEstimator._abc_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_cache
csb.statistics.pdf.AbstractEstimator.__metaclass__	abc.ABCMeta-class.html
csb.statistics.pdf.AbstractEstimator._abc_negative_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache
csb.statistics.pdf.InverseGaussianMLEstimator.__abstractmethods__	csb.statistics.pdf.InverseGaussianMLEstimator-class.html#__abstractmethods__
csb.statistics.pdf.AbstractEstimator._abc_negative_cache_version	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache_version
csb.statistics.pdf.InverseGaussianMLEstimator.estimate	csb.statistics.pdf.InverseGaussianMLEstimator-class.html#estimate
csb.statistics.pdf.AbstractEstimator._abc_registry	csb.statistics.pdf.AbstractEstimator-class.html#_abc_registry
csb.statistics.pdf.Laplace	csb.statistics.pdf.Laplace-class.html
csb.statistics.pdf.AbstractDensity.__metaclass__	abc.ABCMeta-class.html
csb.statistics.pdf.Laplace._validate	csb.statistics.pdf.Laplace-class.html#_validate
csb.statistics.pdf.AbstractDensity._abc_negative_cache	csb.statistics.pdf.AbstractDensity-class.html#_abc_negative_cache
csb.statistics.pdf.AbstractDensity.__str__	csb.statistics.pdf.AbstractDensity-class.html#__str__
csb.statistics.pdf.Laplace.random	csb.statistics.pdf.Laplace-class.html#random
csb.statistics.pdf.Laplace.__init__	csb.statistics.pdf.Laplace-class.html#__init__
csb.statistics.pdf.AbstractDensity._abc_cache	csb.statistics.pdf.AbstractDensity-class.html#_abc_cache
csb.statistics.pdf.AbstractDensity.parameters	csb.statistics.pdf.AbstractDensity-class.html#parameters
csb.statistics.pdf.Laplace.__abstractmethods__	csb.statistics.pdf.Laplace-class.html#__abstractmethods__
csb.statistics.pdf.AbstractDensity.get_params	csb.statistics.pdf.AbstractDensity-class.html#get_params
csb.statistics.pdf.AbstractDensity.__call__	csb.statistics.pdf.AbstractDensity-class.html#__call__
csb.statistics.pdf.AbstractDensity.__getitem__	csb.statistics.pdf.AbstractDensity-class.html#__getitem__
csb.statistics.pdf.AbstractDensity.evaluate	csb.statistics.pdf.AbstractDensity-class.html#evaluate
csb.statistics.pdf.AbstractDensity._register	csb.statistics.pdf.AbstractDensity-class.html#_register
csb.statistics.pdf.AbstractDensity.__setitem__	csb.statistics.pdf.AbstractDensity-class.html#__setitem__
csb.statistics.pdf.AbstractDensity.set_params	csb.statistics.pdf.AbstractDensity-class.html#set_params
csb.statistics.pdf.Laplace.log_prob	csb.statistics.pdf.Laplace-class.html#log_prob
csb.statistics.pdf.AbstractDensity.estimate	csb.statistics.pdf.AbstractDensity-class.html#estimate
csb.statistics.pdf.Laplace.b	csb.statistics.pdf.Laplace-class.html#b
csb.statistics.pdf.Laplace.mu	csb.statistics.pdf.Laplace-class.html#mu
csb.statistics.pdf.AbstractDensity.estimator	csb.statistics.pdf.AbstractDensity-class.html#estimator
csb.statistics.pdf.AbstractDensity._abc_negative_cache_version	csb.statistics.pdf.AbstractDensity-class.html#_abc_negative_cache_version
csb.statistics.pdf.AbstractDensity._abc_registry	csb.statistics.pdf.AbstractDensity-class.html#_abc_registry
csb.statistics.pdf.BaseDensity._set	csb.statistics.pdf.BaseDensity-class.html#_set
csb.statistics.pdf.LaplaceMLEstimator	csb.statistics.pdf.LaplaceMLEstimator-class.html
csb.statistics.pdf.AbstractEstimator._abc_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_cache
csb.statistics.pdf.AbstractEstimator.__metaclass__	abc.ABCMeta-class.html
csb.statistics.pdf.AbstractEstimator._abc_negative_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache
csb.statistics.pdf.LaplaceMLEstimator.__abstractmethods__	csb.statistics.pdf.LaplaceMLEstimator-class.html#__abstractmethods__
csb.statistics.pdf.AbstractEstimator._abc_negative_cache_version	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache_version
csb.statistics.pdf.LaplaceMLEstimator.estimate	csb.statistics.pdf.LaplaceMLEstimator-class.html#estimate
csb.statistics.pdf.AbstractEstimator._abc_registry	csb.statistics.pdf.AbstractEstimator-class.html#_abc_registry
csb.statistics.pdf.MultivariateGaussian	csb.statistics.pdf.MultivariateGaussian-class.html
csb.statistics.pdf.AbstractDensity.__metaclass__	abc.ABCMeta-class.html
csb.statistics.pdf.AbstractDensity._validate	csb.statistics.pdf.AbstractDensity-class.html#_validate
csb.statistics.pdf.AbstractDensity._abc_negative_cache	csb.statistics.pdf.AbstractDensity-class.html#_abc_negative_cache
csb.statistics.pdf.AbstractDensity.__str__	csb.statistics.pdf.AbstractDensity-class.html#__str__
csb.statistics.pdf.MultivariateGaussian.conditional	csb.statistics.pdf.MultivariateGaussian-class.html#conditional
csb.statistics.pdf.MultivariateGaussian.__init__	csb.statistics.pdf.MultivariateGaussian-class.html#__init__
csb.statistics.pdf.AbstractDensity._abc_cache	csb.statistics.pdf.AbstractDensity-class.html#_abc_cache
csb.statistics.pdf.AbstractDensity.parameters	csb.statistics.pdf.AbstractDensity-class.html#parameters
csb.statistics.pdf.Normal.__abstractmethods__	csb.statistics.pdf.Normal-class.html#__abstractmethods__
csb.statistics.pdf.AbstractDensity.get_params	csb.statistics.pdf.AbstractDensity-class.html#get_params
csb.statistics.pdf.AbstractDensity.__call__	csb.statistics.pdf.AbstractDensity-class.html#__call__
csb.statistics.pdf.AbstractDensity._abc_negative_cache_version	csb.statistics.pdf.AbstractDensity-class.html#_abc_negative_cache_version
csb.statistics.pdf.MultivariateGaussian.random	csb.statistics.pdf.MultivariateGaussian-class.html#random
csb.statistics.pdf.AbstractDensity.__getitem__	csb.statistics.pdf.AbstractDensity-class.html#__getitem__
csb.statistics.pdf.AbstractDensity.evaluate	csb.statistics.pdf.AbstractDensity-class.html#evaluate
csb.statistics.pdf.AbstractDensity._register	csb.statistics.pdf.AbstractDensity-class.html#_register
csb.statistics.pdf.AbstractDensity.__setitem__	csb.statistics.pdf.AbstractDensity-class.html#__setitem__
csb.statistics.pdf.AbstractDensity.set_params	csb.statistics.pdf.AbstractDensity-class.html#set_params
csb.statistics.pdf.MultivariateGaussian.log_prob	csb.statistics.pdf.MultivariateGaussian-class.html#log_prob
csb.statistics.pdf.AbstractDensity.estimate	csb.statistics.pdf.AbstractDensity-class.html#estimate
csb.statistics.pdf.AbstractDensity._abc_registry	csb.statistics.pdf.AbstractDensity-class.html#_abc_registry
csb.statistics.pdf.Normal.mu	csb.statistics.pdf.Normal-class.html#mu
csb.statistics.pdf.AbstractDensity.estimator	csb.statistics.pdf.AbstractDensity-class.html#estimator
csb.statistics.pdf.MultivariateGaussian.__q	csb.statistics.pdf.MultivariateGaussian-class.html#__q
csb.statistics.pdf.Normal.sigma	csb.statistics.pdf.Normal-class.html#sigma
csb.statistics.pdf.BaseDensity._set	csb.statistics.pdf.BaseDensity-class.html#_set
csb.statistics.pdf.MultivariateGaussianMLEstimator	csb.statistics.pdf.MultivariateGaussianMLEstimator-class.html
csb.statistics.pdf.AbstractEstimator._abc_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_cache
csb.statistics.pdf.AbstractEstimator.__metaclass__	abc.ABCMeta-class.html
csb.statistics.pdf.AbstractEstimator._abc_negative_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache
csb.statistics.pdf.MultivariateGaussianMLEstimator.__abstractmethods__	csb.statistics.pdf.MultivariateGaussianMLEstimator-class.html#__abstractmethods__
csb.statistics.pdf.AbstractEstimator._abc_negative_cache_version	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache_version
csb.statistics.pdf.MultivariateGaussianMLEstimator.estimate	csb.statistics.pdf.MultivariateGaussianMLEstimator-class.html#estimate
csb.statistics.pdf.AbstractEstimator._abc_registry	csb.statistics.pdf.AbstractEstimator-class.html#_abc_registry
csb.statistics.pdf.MultivariateGaussianMLEstimator.__init__	csb.statistics.pdf.MultivariateGaussianMLEstimator-class.html#__init__
csb.statistics.pdf.Normal	csb.statistics.pdf.Normal-class.html
csb.statistics.pdf.AbstractDensity.__metaclass__	abc.ABCMeta-class.html
csb.statistics.pdf.AbstractDensity._validate	csb.statistics.pdf.AbstractDensity-class.html#_validate
csb.statistics.pdf.AbstractDensity._abc_negative_cache	csb.statistics.pdf.AbstractDensity-class.html#_abc_negative_cache
csb.statistics.pdf.AbstractDensity.__str__	csb.statistics.pdf.AbstractDensity-class.html#__str__
csb.statistics.pdf.Normal.random	csb.statistics.pdf.Normal-class.html#random
csb.statistics.pdf.Normal.__init__	csb.statistics.pdf.Normal-class.html#__init__
csb.statistics.pdf.AbstractDensity._abc_cache	csb.statistics.pdf.AbstractDensity-class.html#_abc_cache
csb.statistics.pdf.AbstractDensity.parameters	csb.statistics.pdf.AbstractDensity-class.html#parameters
csb.statistics.pdf.Normal.__abstractmethods__	csb.statistics.pdf.Normal-class.html#__abstractmethods__
csb.statistics.pdf.AbstractDensity.get_params	csb.statistics.pdf.AbstractDensity-class.html#get_params
csb.statistics.pdf.AbstractDensity.__call__	csb.statistics.pdf.AbstractDensity-class.html#__call__
csb.statistics.pdf.AbstractDensity.__getitem__	csb.statistics.pdf.AbstractDensity-class.html#__getitem__
csb.statistics.pdf.AbstractDensity.evaluate	csb.statistics.pdf.AbstractDensity-class.html#evaluate
csb.statistics.pdf.AbstractDensity._register	csb.statistics.pdf.AbstractDensity-class.html#_register
csb.statistics.pdf.AbstractDensity.__setitem__	csb.statistics.pdf.AbstractDensity-class.html#__setitem__
csb.statistics.pdf.AbstractDensity.set_params	csb.statistics.pdf.AbstractDensity-class.html#set_params
csb.statistics.pdf.Normal.log_prob	csb.statistics.pdf.Normal-class.html#log_prob
csb.statistics.pdf.AbstractDensity.estimate	csb.statistics.pdf.AbstractDensity-class.html#estimate
csb.statistics.pdf.AbstractDensity._abc_registry	csb.statistics.pdf.AbstractDensity-class.html#_abc_registry
csb.statistics.pdf.Normal.mu	csb.statistics.pdf.Normal-class.html#mu
csb.statistics.pdf.AbstractDensity.estimator	csb.statistics.pdf.AbstractDensity-class.html#estimator
csb.statistics.pdf.AbstractDensity._abc_negative_cache_version	csb.statistics.pdf.AbstractDensity-class.html#_abc_negative_cache_version
csb.statistics.pdf.Normal.sigma	csb.statistics.pdf.Normal-class.html#sigma
csb.statistics.pdf.BaseDensity._set	csb.statistics.pdf.BaseDensity-class.html#_set
csb.statistics.pdf.NullEstimator	csb.statistics.pdf.NullEstimator-class.html
csb.statistics.pdf.AbstractEstimator._abc_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_cache
csb.statistics.pdf.AbstractEstimator.__metaclass__	abc.ABCMeta-class.html
csb.statistics.pdf.AbstractEstimator._abc_negative_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache
csb.statistics.pdf.NullEstimator.__abstractmethods__	csb.statistics.pdf.NullEstimator-class.html#__abstractmethods__
csb.statistics.pdf.AbstractEstimator._abc_negative_cache_version	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache_version
csb.statistics.pdf.NullEstimator.estimate	csb.statistics.pdf.NullEstimator-class.html#estimate
csb.statistics.pdf.AbstractEstimator._abc_registry	csb.statistics.pdf.AbstractEstimator-class.html#_abc_registry
csb.statistics.pdf.ParameterNotFoundError	csb.statistics.pdf.ParameterNotFoundError-class.html
csb.statistics.pdf.ParameterValueError	csb.statistics.pdf.ParameterValueError-class.html
csb.statistics.pdf.ParameterValueError.__str__	csb.statistics.pdf.ParameterValueError-class.html#__str__
csb.statistics.pdf.ParameterValueError.__init__	csb.statistics.pdf.ParameterValueError-class.html#__init__
csb.statistics.pdf.parameterized.AbstractParameter	csb.statistics.pdf.parameterized.AbstractParameter-class.html
csb.statistics.pdf.parameterized.AbstractParameter.set	csb.statistics.pdf.parameterized.AbstractParameter-class.html#set
csb.statistics.pdf.parameterized.AbstractParameter._validate	csb.statistics.pdf.parameterized.AbstractParameter-class.html#_validate
csb.statistics.pdf.parameterized.AbstractParameter._set_base	csb.statistics.pdf.parameterized.AbstractParameter-class.html#_set_base
csb.statistics.pdf.parameterized.AbstractParameter._nearest_consistent_base	csb.statistics.pdf.parameterized.AbstractParameter-class.html#_nearest_consistent_base
csb.statistics.pdf.parameterized.AbstractParameter._update	csb.statistics.pdf.parameterized.AbstractParameter-class.html#_update
csb.statistics.pdf.parameterized.AbstractParameter._compute	csb.statistics.pdf.parameterized.AbstractParameter-class.html#_compute
csb.statistics.pdf.parameterized.AbstractParameter.NULL	csb.statistics.pdf.parameterized.AbstractParameter-class.html#NULL
csb.statistics.pdf.parameterized.AbstractParameter.bind_to	csb.statistics.pdf.parameterized.AbstractParameter-class.html#bind_to
csb.statistics.pdf.parameterized.AbstractParameter.__init__	csb.statistics.pdf.parameterized.AbstractParameter-class.html#__init__
csb.statistics.pdf.parameterized.AbstractParameter.is_virtual	csb.statistics.pdf.parameterized.AbstractParameter-class.html#is_virtual
csb.statistics.pdf.parameterized.AbstractParameter._recompute	csb.statistics.pdf.parameterized.AbstractParameter-class.html#_recompute
csb.statistics.pdf.parameterized.AbstractParameter._invalidate	csb.statistics.pdf.parameterized.AbstractParameter-class.html#_invalidate
csb.statistics.pdf.parameterized.AbstractParameter.find_base_parameter	csb.statistics.pdf.parameterized.AbstractParameter-class.html#find_base_parameter
csb.statistics.pdf.parameterized.AbstractParameter.name	csb.statistics.pdf.parameterized.AbstractParameter-class.html#name
csb.statistics.pdf.parameterized.AbstractParameter._recompute_derivatives	csb.statistics.pdf.parameterized.AbstractParameter-class.html#_recompute_derivatives
csb.statistics.pdf.parameterized.AbstractParameter.value	csb.statistics.pdf.parameterized.AbstractParameter-class.html#value
csb.statistics.pdf.parameterized.AbstractParameter._ensure_consistency	csb.statistics.pdf.parameterized.AbstractParameter-class.html#_ensure_consistency
csb.statistics.pdf.parameterized.AbstractParameter._add_derived	csb.statistics.pdf.parameterized.AbstractParameter-class.html#_add_derived
csb.statistics.pdf.parameterized.NonVirtualParameter	csb.statistics.pdf.parameterized.NonVirtualParameter-class.html
csb.statistics.pdf.parameterized.AbstractParameter.set	csb.statistics.pdf.parameterized.AbstractParameter-class.html#set
csb.statistics.pdf.parameterized.Parameter._validate	csb.statistics.pdf.parameterized.Parameter-class.html#_validate
csb.statistics.pdf.parameterized.AbstractParameter._set_base	csb.statistics.pdf.parameterized.AbstractParameter-class.html#_set_base
csb.statistics.pdf.parameterized.AbstractParameter._nearest_consistent_base	csb.statistics.pdf.parameterized.AbstractParameter-class.html#_nearest_consistent_base
csb.statistics.pdf.parameterized.AbstractParameter._update	csb.statistics.pdf.parameterized.AbstractParameter-class.html#_update
csb.statistics.pdf.parameterized.AbstractParameter._compute	csb.statistics.pdf.parameterized.AbstractParameter-class.html#_compute
csb.statistics.pdf.parameterized.AbstractParameter.NULL	csb.statistics.pdf.parameterized.AbstractParameter-class.html#NULL
csb.statistics.pdf.parameterized.NonVirtualParameter.bind_to	csb.statistics.pdf.parameterized.NonVirtualParameter-class.html#bind_to
csb.statistics.pdf.parameterized.Parameter.__init__	csb.statistics.pdf.parameterized.Parameter-class.html#__init__
csb.statistics.pdf.parameterized.NonVirtualParameter.is_virtual	csb.statistics.pdf.parameterized.NonVirtualParameter-class.html#is_virtual
csb.statistics.pdf.parameterized.AbstractParameter._recompute	csb.statistics.pdf.parameterized.AbstractParameter-class.html#_recompute
csb.statistics.pdf.parameterized.AbstractParameter._invalidate	csb.statistics.pdf.parameterized.AbstractParameter-class.html#_invalidate
csb.statistics.pdf.parameterized.AbstractParameter.find_base_parameter	csb.statistics.pdf.parameterized.AbstractParameter-class.html#find_base_parameter
csb.statistics.pdf.parameterized.AbstractParameter.name	csb.statistics.pdf.parameterized.AbstractParameter-class.html#name
csb.statistics.pdf.parameterized.AbstractParameter._recompute_derivatives	csb.statistics.pdf.parameterized.AbstractParameter-class.html#_recompute_derivatives
csb.statistics.pdf.parameterized.AbstractParameter.value	csb.statistics.pdf.parameterized.AbstractParameter-class.html#value
csb.statistics.pdf.parameterized.AbstractParameter._ensure_consistency	csb.statistics.pdf.parameterized.AbstractParameter-class.html#_ensure_consistency
csb.statistics.pdf.parameterized.AbstractParameter._add_derived	csb.statistics.pdf.parameterized.AbstractParameter-class.html#_add_derived
csb.statistics.pdf.parameterized.Parameter	csb.statistics.pdf.parameterized.Parameter-class.html
csb.statistics.pdf.parameterized.AbstractParameter.set	csb.statistics.pdf.parameterized.AbstractParameter-class.html#set
csb.statistics.pdf.parameterized.Parameter._validate	csb.statistics.pdf.parameterized.Parameter-class.html#_validate
csb.statistics.pdf.parameterized.AbstractParameter._set_base	csb.statistics.pdf.parameterized.AbstractParameter-class.html#_set_base
csb.statistics.pdf.parameterized.AbstractParameter._nearest_consistent_base	csb.statistics.pdf.parameterized.AbstractParameter-class.html#_nearest_consistent_base
csb.statistics.pdf.parameterized.AbstractParameter._update	csb.statistics.pdf.parameterized.AbstractParameter-class.html#_update
csb.statistics.pdf.parameterized.AbstractParameter._compute	csb.statistics.pdf.parameterized.AbstractParameter-class.html#_compute
csb.statistics.pdf.parameterized.AbstractParameter.NULL	csb.statistics.pdf.parameterized.AbstractParameter-class.html#NULL
csb.statistics.pdf.parameterized.AbstractParameter.bind_to	csb.statistics.pdf.parameterized.AbstractParameter-class.html#bind_to
csb.statistics.pdf.parameterized.Parameter.__init__	csb.statistics.pdf.parameterized.Parameter-class.html#__init__
csb.statistics.pdf.parameterized.AbstractParameter.is_virtual	csb.statistics.pdf.parameterized.AbstractParameter-class.html#is_virtual
csb.statistics.pdf.parameterized.AbstractParameter._recompute	csb.statistics.pdf.parameterized.AbstractParameter-class.html#_recompute
csb.statistics.pdf.parameterized.AbstractParameter._invalidate	csb.statistics.pdf.parameterized.AbstractParameter-class.html#_invalidate
csb.statistics.pdf.parameterized.AbstractParameter.find_base_parameter	csb.statistics.pdf.parameterized.AbstractParameter-class.html#find_base_parameter
csb.statistics.pdf.parameterized.AbstractParameter.name	csb.statistics.pdf.parameterized.AbstractParameter-class.html#name
csb.statistics.pdf.parameterized.AbstractParameter._recompute_derivatives	csb.statistics.pdf.parameterized.AbstractParameter-class.html#_recompute_derivatives
csb.statistics.pdf.parameterized.AbstractParameter.value	csb.statistics.pdf.parameterized.AbstractParameter-class.html#value
csb.statistics.pdf.parameterized.AbstractParameter._ensure_consistency	csb.statistics.pdf.parameterized.AbstractParameter-class.html#_ensure_consistency
csb.statistics.pdf.parameterized.AbstractParameter._add_derived	csb.statistics.pdf.parameterized.AbstractParameter-class.html#_add_derived
csb.statistics.pdf.parameterized.ParameterValueError	csb.statistics.pdf.parameterized.ParameterValueError-class.html
csb.statistics.pdf.ParameterValueError.__str__	csb.statistics.pdf.ParameterValueError-class.html#__str__
csb.statistics.pdf.ParameterValueError.__init__	csb.statistics.pdf.ParameterValueError-class.html#__init__
csb.statistics.pdf.parameterized.ParameterizationError	csb.statistics.pdf.parameterized.ParameterizationError-class.html
csb.statistics.pdf.parameterized.ParameterizedDensity	csb.statistics.pdf.parameterized.ParameterizedDensity-class.html
csb.statistics.pdf.AbstractDensity.__metaclass__	abc.ABCMeta-class.html
csb.statistics.pdf.AbstractDensity._validate	csb.statistics.pdf.AbstractDensity-class.html#_validate
csb.statistics.pdf.AbstractDensity._abc_negative_cache	csb.statistics.pdf.AbstractDensity-class.html#_abc_negative_cache
csb.statistics.pdf.AbstractDensity.__str__	csb.statistics.pdf.AbstractDensity-class.html#__str__
csb.statistics.pdf.AbstractDensity.random	csb.statistics.pdf.AbstractDensity-class.html#random
csb.statistics.pdf.AbstractDensity.__init__	csb.statistics.pdf.AbstractDensity-class.html#__init__
csb.statistics.pdf.AbstractDensity._abc_cache	csb.statistics.pdf.AbstractDensity-class.html#_abc_cache
csb.statistics.pdf.AbstractDensity.parameters	csb.statistics.pdf.AbstractDensity-class.html#parameters
csb.statistics.pdf.AbstractDensity.__abstractmethods__	csb.statistics.pdf.AbstractDensity-class.html#__abstractmethods__
csb.statistics.pdf.AbstractDensity.get_params	csb.statistics.pdf.AbstractDensity-class.html#get_params
csb.statistics.pdf.AbstractDensity.__call__	csb.statistics.pdf.AbstractDensity-class.html#__call__
csb.statistics.pdf.AbstractDensity.__getitem__	csb.statistics.pdf.AbstractDensity-class.html#__getitem__
csb.statistics.pdf.AbstractDensity.evaluate	csb.statistics.pdf.AbstractDensity-class.html#evaluate
csb.statistics.pdf.AbstractDensity._register	csb.statistics.pdf.AbstractDensity-class.html#_register
csb.statistics.pdf.AbstractDensity.__setitem__	csb.statistics.pdf.AbstractDensity-class.html#__setitem__
csb.statistics.pdf.AbstractDensity.set_params	csb.statistics.pdf.AbstractDensity-class.html#set_params
csb.statistics.pdf.AbstractDensity.log_prob	csb.statistics.pdf.AbstractDensity-class.html#log_prob
csb.statistics.pdf.AbstractDensity.estimate	csb.statistics.pdf.AbstractDensity-class.html#estimate
csb.statistics.pdf.AbstractDensity.estimator	csb.statistics.pdf.AbstractDensity-class.html#estimator
csb.statistics.pdf.AbstractDensity._abc_negative_cache_version	csb.statistics.pdf.AbstractDensity-class.html#_abc_negative_cache_version
csb.statistics.pdf.AbstractDensity._abc_registry	csb.statistics.pdf.AbstractDensity-class.html#_abc_registry
csb.statistics.pdf.parameterized.ParameterizedDensity._set	csb.statistics.pdf.parameterized.ParameterizedDensity-class.html#_set
csb.statistics.samplers.AbstractSampler	csb.statistics.samplers.AbstractSampler-class.html
csb.statistics.samplers.AbstractSampler._abc_cache	csb.statistics.samplers.AbstractSampler-class.html#_abc_cache
csb.statistics.samplers.AbstractSampler.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.AbstractSampler._abc_negative_cache	csb.statistics.samplers.AbstractSampler-class.html#_abc_negative_cache
csb.statistics.samplers.AbstractSampler.__abstractmethods__	csb.statistics.samplers.AbstractSampler-class.html#__abstractmethods__
csb.statistics.samplers.AbstractSampler.sample	csb.statistics.samplers.AbstractSampler-class.html#sample
csb.statistics.samplers.AbstractSampler._abc_negative_cache_version	csb.statistics.samplers.AbstractSampler-class.html#_abc_negative_cache_version
csb.statistics.samplers.AbstractSampler._abc_registry	csb.statistics.samplers.AbstractSampler-class.html#_abc_registry
csb.statistics.samplers.AbstractState	csb.statistics.samplers.AbstractState-class.html
csb.statistics.samplers.AbstractState.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.AbstractState._abc_negative_cache	csb.statistics.samplers.AbstractState-class.html#_abc_negative_cache
csb.statistics.samplers.AbstractState._abc_cache	csb.statistics.samplers.AbstractState-class.html#_abc_cache
csb.statistics.samplers.AbstractState.__abstractmethods__	csb.statistics.samplers.AbstractState-class.html#__abstractmethods__
csb.statistics.samplers.AbstractState.momentum	csb.statistics.samplers.AbstractState-class.html#momentum
csb.statistics.samplers.AbstractState._abc_negative_cache_version	csb.statistics.samplers.AbstractState-class.html#_abc_negative_cache_version
csb.statistics.samplers.AbstractState.position	csb.statistics.samplers.AbstractState-class.html#position
csb.statistics.samplers.AbstractState._abc_registry	csb.statistics.samplers.AbstractState-class.html#_abc_registry
csb.statistics.samplers.DimensionError	csb.statistics.samplers.DimensionError-class.html
csb.statistics.samplers.EnsembleState	csb.statistics.samplers.EnsembleState-class.html
csb.core.BaseCollectionContainer._exception	csb.core.BaseCollectionContainer-class.html#_exception
csb.statistics.samplers.AbstractState.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.AbstractState._abc_negative_cache	csb.statistics.samplers.AbstractState-class.html#_abc_negative_cache
csb.core.BaseCollectionContainer.last_index	csb.core.BaseCollectionContainer-class.html#last_index
csb.statistics.samplers.EnsembleState.__init__	csb.statistics.samplers.EnsembleState-class.html#__init__
csb.statistics.samplers.AbstractState._abc_cache	csb.statistics.samplers.AbstractState-class.html#_abc_cache
csb.core.BaseCollectionContainer.__contains__	csb.core.BaseCollectionContainer-class.html#__contains__
csb.statistics.samplers.EnsembleState.__abstractmethods__	csb.statistics.samplers.EnsembleState-class.html#__abstractmethods__
csb.core.BaseCollectionContainer._getinternal	csb.core.BaseCollectionContainer-class.html#_getinternal
csb.statistics.samplers.EnsembleState.momentum	csb.statistics.samplers.EnsembleState-class.html#momentum
csb.core.BaseCollectionContainer._update_items	csb.core.BaseCollectionContainer-class.html#_update_items
csb.core.BaseCollectionContainer.__len__	csb.core.BaseCollectionContainer-class.html#__len__
csb.core.BaseCollectionContainer.__getitem__	csb.core.BaseCollectionContainer-class.html#__getitem__
csb.core.BaseCollectionContainer.__iter__	csb.core.BaseCollectionContainer-class.html#__iter__
csb.core.BaseCollectionContainer.__bool__	csb.core.BaseCollectionContainer-class.html#__bool__
csb.core.BaseCollectionContainer.start_index	csb.core.BaseCollectionContainer-class.html#start_index
csb.core.BaseCollectionContainer._append_item	csb.core.BaseCollectionContainer-class.html#_append_item
csb.core.BaseCollectionContainer.__nonzero__	csb.core.BaseCollectionContainer-class.html#__nonzero__
csb.core.BaseCollectionContainer._sort	csb.core.BaseCollectionContainer-class.html#_sort
csb.core.BaseCollectionContainer.length	csb.core.BaseCollectionContainer-class.html#length
csb.statistics.samplers.AbstractState._abc_negative_cache_version	csb.statistics.samplers.AbstractState-class.html#_abc_negative_cache_version
csb.core.BaseCollectionContainer.__repr__	csb.core.BaseCollectionContainer-class.html#__repr__
csb.statistics.samplers.EnsembleState.position	csb.statistics.samplers.EnsembleState-class.html#position
csb.statistics.samplers.AbstractState._abc_registry	csb.statistics.samplers.AbstractState-class.html#_abc_registry
csb.statistics.samplers.State	csb.statistics.samplers.State-class.html
csb.statistics.samplers.AbstractState.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.AbstractState._abc_negative_cache	csb.statistics.samplers.AbstractState-class.html#_abc_negative_cache
csb.statistics.samplers.State.__init__	csb.statistics.samplers.State-class.html#__init__
csb.statistics.samplers.AbstractState._abc_cache	csb.statistics.samplers.AbstractState-class.html#_abc_cache
csb.statistics.samplers.State.__abstractmethods__	csb.statistics.samplers.State-class.html#__abstractmethods__
csb.statistics.samplers.State.momentum	csb.statistics.samplers.State-class.html#momentum
csb.statistics.samplers.State.check_flat_array	csb.statistics.samplers.State-class.html#check_flat_array
csb.statistics.samplers.State.clone	csb.statistics.samplers.State-class.html#clone
csb.statistics.samplers.State.__eq__	csb.statistics.samplers.State-class.html#__eq__
csb.statistics.samplers.State.check_equal_length	csb.statistics.samplers.State-class.html#check_equal_length
csb.statistics.samplers.AbstractState._abc_negative_cache_version	csb.statistics.samplers.AbstractState-class.html#_abc_negative_cache_version
csb.statistics.samplers.State.position	csb.statistics.samplers.State-class.html#position
csb.statistics.samplers.AbstractState._abc_registry	csb.statistics.samplers.AbstractState-class.html#_abc_registry
csb.statistics.samplers.mc.AbstractMC	csb.statistics.samplers.mc.AbstractMC-class.html
csb.statistics.samplers.AbstractSampler.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.AbstractSampler._abc_negative_cache	csb.statistics.samplers.AbstractSampler-class.html#_abc_negative_cache
csb.statistics.samplers.mc.AbstractMC.energy	csb.statistics.samplers.mc.AbstractMC-class.html#energy
csb.statistics.samplers.mc.AbstractMC.sample	csb.statistics.samplers.mc.AbstractMC-class.html#sample
csb.statistics.samplers.mc.AbstractMC.__init__	csb.statistics.samplers.mc.AbstractMC-class.html#__init__
csb.statistics.samplers.AbstractSampler._abc_cache	csb.statistics.samplers.AbstractSampler-class.html#_abc_cache
csb.statistics.samplers.mc.AbstractMC.__abstractmethods__	csb.statistics.samplers.mc.AbstractMC-class.html#__abstractmethods__
csb.statistics.samplers.mc.AbstractMC.state	csb.statistics.samplers.mc.AbstractMC-class.html#state
csb.statistics.samplers.mc.AbstractMC._checkstate	csb.statistics.samplers.mc.AbstractMC-class.html#_checkstate
csb.statistics.samplers.AbstractSampler._abc_negative_cache_version	csb.statistics.samplers.AbstractSampler-class.html#_abc_negative_cache_version
csb.statistics.samplers.AbstractSampler._abc_registry	csb.statistics.samplers.AbstractSampler-class.html#_abc_registry
csb.statistics.samplers.mc.AbstractPropagationResult	csb.statistics.samplers.mc.AbstractPropagationResult-class.html
csb.statistics.samplers.mc.AbstractPropagationResult.initial	csb.statistics.samplers.mc.AbstractPropagationResult-class.html#initial
csb.statistics.samplers.mc.AbstractPropagationResult.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.mc.AbstractPropagationResult._abc_negative_cache	csb.statistics.samplers.mc.AbstractPropagationResult-class.html#_abc_negative_cache
csb.statistics.samplers.mc.AbstractPropagationResult._abc_cache	csb.statistics.samplers.mc.AbstractPropagationResult-class.html#_abc_cache
csb.statistics.samplers.mc.AbstractPropagationResult.__abstractmethods__	csb.statistics.samplers.mc.AbstractPropagationResult-class.html#__abstractmethods__
csb.statistics.samplers.mc.AbstractPropagationResult.final	csb.statistics.samplers.mc.AbstractPropagationResult-class.html#final
csb.statistics.samplers.mc.AbstractPropagationResult.heat	csb.statistics.samplers.mc.AbstractPropagationResult-class.html#heat
csb.statistics.samplers.mc.AbstractPropagationResult._abc_negative_cache_version	csb.statistics.samplers.mc.AbstractPropagationResult-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.AbstractPropagationResult._abc_registry	csb.statistics.samplers.mc.AbstractPropagationResult-class.html#_abc_registry
csb.statistics.samplers.mc.MCCollection	csb.statistics.samplers.mc.MCCollection-class.html
csb.core.BaseCollectionContainer._exception	csb.core.BaseCollectionContainer-class.html#_exception
csb.core.BaseCollectionContainer.last_index	csb.core.BaseCollectionContainer-class.html#last_index
csb.statistics.samplers.mc.MCCollection.__init__	csb.statistics.samplers.mc.MCCollection-class.html#__init__
csb.core.BaseCollectionContainer.__contains__	csb.core.BaseCollectionContainer-class.html#__contains__
csb.core.BaseCollectionContainer._getinternal	csb.core.BaseCollectionContainer-class.html#_getinternal
csb.core.BaseCollectionContainer._update_items	csb.core.BaseCollectionContainer-class.html#_update_items
csb.core.BaseCollectionContainer.__len__	csb.core.BaseCollectionContainer-class.html#__len__
csb.core.BaseCollectionContainer.__getitem__	csb.core.BaseCollectionContainer-class.html#__getitem__
csb.core.BaseCollectionContainer.__iter__	csb.core.BaseCollectionContainer-class.html#__iter__
csb.core.BaseCollectionContainer.__bool__	csb.core.BaseCollectionContainer-class.html#__bool__
csb.core.BaseCollectionContainer.start_index	csb.core.BaseCollectionContainer-class.html#start_index
csb.core.BaseCollectionContainer._append_item	csb.core.BaseCollectionContainer-class.html#_append_item
csb.core.BaseCollectionContainer.__nonzero__	csb.core.BaseCollectionContainer-class.html#__nonzero__
csb.core.BaseCollectionContainer._sort	csb.core.BaseCollectionContainer-class.html#_sort
csb.core.BaseCollectionContainer.length	csb.core.BaseCollectionContainer-class.html#length
csb.core.BaseCollectionContainer.__repr__	csb.core.BaseCollectionContainer-class.html#__repr__
csb.statistics.samplers.mc.PropagationResult	csb.statistics.samplers.mc.PropagationResult-class.html
csb.statistics.samplers.mc.PropagationResult.initial	csb.statistics.samplers.mc.PropagationResult-class.html#initial
csb.statistics.samplers.mc.AbstractPropagationResult.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.mc.AbstractPropagationResult._abc_negative_cache	csb.statistics.samplers.mc.AbstractPropagationResult-class.html#_abc_negative_cache
csb.statistics.samplers.mc.PropagationResult.__init__	csb.statistics.samplers.mc.PropagationResult-class.html#__init__
csb.statistics.samplers.mc.AbstractPropagationResult._abc_cache	csb.statistics.samplers.mc.AbstractPropagationResult-class.html#_abc_cache
csb.statistics.samplers.mc.PropagationResult.__abstractmethods__	csb.statistics.samplers.mc.PropagationResult-class.html#__abstractmethods__
csb.statistics.samplers.mc.PropagationResult.final	csb.statistics.samplers.mc.PropagationResult-class.html#final
csb.statistics.samplers.mc.PropagationResult.heat	csb.statistics.samplers.mc.PropagationResult-class.html#heat
csb.statistics.samplers.mc.PropagationResult.__iter__	csb.statistics.samplers.mc.PropagationResult-class.html#__iter__
csb.statistics.samplers.mc.AbstractPropagationResult._abc_negative_cache_version	csb.statistics.samplers.mc.AbstractPropagationResult-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.AbstractPropagationResult._abc_registry	csb.statistics.samplers.mc.AbstractPropagationResult-class.html#_abc_registry
csb.statistics.samplers.mc.ShortTrajectoryBuilder	csb.statistics.samplers.mc.ShortTrajectoryBuilder-class.html
csb.statistics.samplers.mc.TrajectoryBuilder.add_final_state	csb.statistics.samplers.mc.TrajectoryBuilder-class.html#add_final_state
csb.statistics.samplers.mc.ShortTrajectoryBuilder.product	csb.statistics.samplers.mc.ShortTrajectoryBuilder-class.html#product
csb.statistics.samplers.mc.TrajectoryBuilder.create	csb.statistics.samplers.mc.TrajectoryBuilder-class.html#create
csb.statistics.samplers.mc.ShortTrajectoryBuilder.add_intermediate_state	csb.statistics.samplers.mc.ShortTrajectoryBuilder-class.html#add_intermediate_state
csb.statistics.samplers.mc.TrajectoryBuilder.__init__	csb.statistics.samplers.mc.TrajectoryBuilder-class.html#__init__
csb.statistics.samplers.mc.TrajectoryBuilder.add_initial_state	csb.statistics.samplers.mc.TrajectoryBuilder-class.html#add_initial_state
csb.statistics.samplers.mc.Trajectory	csb.statistics.samplers.mc.Trajectory-class.html
csb.core.BaseCollectionContainer._exception	csb.core.BaseCollectionContainer-class.html#_exception
csb.statistics.samplers.mc.Trajectory.__abstractmethods__	csb.statistics.samplers.mc.Trajectory-class.html#__abstractmethods__
csb.statistics.samplers.mc.AbstractPropagationResult.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.mc.AbstractPropagationResult._abc_negative_cache	csb.statistics.samplers.mc.AbstractPropagationResult-class.html#_abc_negative_cache
csb.core.BaseCollectionContainer.last_index	csb.core.BaseCollectionContainer-class.html#last_index
csb.core.CollectionContainer._update	csb.core.CollectionContainer-class.html#_update
csb.core.CollectionContainer.append	csb.core.CollectionContainer-class.html#append
csb.statistics.samplers.mc.AbstractPropagationResult._abc_cache	csb.statistics.samplers.mc.AbstractPropagationResult-class.html#_abc_cache
csb.core.BaseCollectionContainer.__contains__	csb.core.BaseCollectionContainer-class.html#__contains__
csb.statistics.samplers.mc.Trajectory.initial	csb.statistics.samplers.mc.Trajectory-class.html#initial
csb.core.BaseCollectionContainer._getinternal	csb.core.BaseCollectionContainer-class.html#_getinternal
csb.statistics.samplers.mc.Trajectory.__init__	csb.statistics.samplers.mc.Trajectory-class.html#__init__
csb.core.BaseCollectionContainer._update_items	csb.core.BaseCollectionContainer-class.html#_update_items
csb.statistics.samplers.mc.Trajectory.final	csb.statistics.samplers.mc.Trajectory-class.html#final
csb.core.BaseCollectionContainer.__len__	csb.core.BaseCollectionContainer-class.html#__len__
csb.core.BaseCollectionContainer.__getitem__	csb.core.BaseCollectionContainer-class.html#__getitem__
csb.core.BaseCollectionContainer.__iter__	csb.core.BaseCollectionContainer-class.html#__iter__
csb.core.BaseCollectionContainer.__bool__	csb.core.BaseCollectionContainer-class.html#__bool__
csb.core.BaseCollectionContainer.start_index	csb.core.BaseCollectionContainer-class.html#start_index
csb.core.BaseCollectionContainer._append_item	csb.core.BaseCollectionContainer-class.html#_append_item
csb.core.BaseCollectionContainer.__nonzero__	csb.core.BaseCollectionContainer-class.html#__nonzero__
csb.core.BaseCollectionContainer._sort	csb.core.BaseCollectionContainer-class.html#_sort
csb.statistics.samplers.mc.Trajectory.work	csb.statistics.samplers.mc.Trajectory-class.html#work
csb.statistics.samplers.mc.Trajectory.heat	csb.statistics.samplers.mc.Trajectory-class.html#heat
csb.core.BaseCollectionContainer.length	csb.core.BaseCollectionContainer-class.html#length
csb.statistics.samplers.mc.AbstractPropagationResult._abc_negative_cache_version	csb.statistics.samplers.mc.AbstractPropagationResult-class.html#_abc_negative_cache_version
csb.core.BaseCollectionContainer.__repr__	csb.core.BaseCollectionContainer-class.html#__repr__
csb.statistics.samplers.mc.AbstractPropagationResult._abc_registry	csb.statistics.samplers.mc.AbstractPropagationResult-class.html#_abc_registry
csb.statistics.samplers.mc.TrajectoryBuilder	csb.statistics.samplers.mc.TrajectoryBuilder-class.html
csb.statistics.samplers.mc.TrajectoryBuilder.add_final_state	csb.statistics.samplers.mc.TrajectoryBuilder-class.html#add_final_state
csb.statistics.samplers.mc.TrajectoryBuilder.product	csb.statistics.samplers.mc.TrajectoryBuilder-class.html#product
csb.statistics.samplers.mc.TrajectoryBuilder.create	csb.statistics.samplers.mc.TrajectoryBuilder-class.html#create
csb.statistics.samplers.mc.TrajectoryBuilder.add_intermediate_state	csb.statistics.samplers.mc.TrajectoryBuilder-class.html#add_intermediate_state
csb.statistics.samplers.mc.TrajectoryBuilder.__init__	csb.statistics.samplers.mc.TrajectoryBuilder-class.html#__init__
csb.statistics.samplers.mc.TrajectoryBuilder.add_initial_state	csb.statistics.samplers.mc.TrajectoryBuilder-class.html#add_initial_state
csb.statistics.samplers.mc.multichain.AbstractEnsembleMC	csb.statistics.samplers.mc.multichain.AbstractEnsembleMC-class.html
csb.statistics.samplers.AbstractSampler.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.AbstractSampler._abc_negative_cache	csb.statistics.samplers.AbstractSampler-class.html#_abc_negative_cache
csb.statistics.samplers.mc.multichain.AbstractEnsembleMC.energy	csb.statistics.samplers.mc.multichain.AbstractEnsembleMC-class.html#energy
csb.statistics.samplers.mc.multichain.AbstractEnsembleMC.sample	csb.statistics.samplers.mc.multichain.AbstractEnsembleMC-class.html#sample
csb.statistics.samplers.mc.multichain.AbstractEnsembleMC.__init__	csb.statistics.samplers.mc.multichain.AbstractEnsembleMC-class.html#__init__
csb.statistics.samplers.AbstractSampler._abc_cache	csb.statistics.samplers.AbstractSampler-class.html#_abc_cache
csb.statistics.samplers.mc.multichain.AbstractEnsembleMC.__abstractmethods__	csb.statistics.samplers.mc.multichain.AbstractEnsembleMC-class.html#__abstractmethods__
csb.statistics.samplers.mc.AbstractMC.state	csb.statistics.samplers.mc.AbstractMC-class.html#state
csb.statistics.samplers.mc.AbstractMC._checkstate	csb.statistics.samplers.mc.AbstractMC-class.html#_checkstate
csb.statistics.samplers.AbstractSampler._abc_negative_cache_version	csb.statistics.samplers.AbstractSampler-class.html#_abc_negative_cache_version
csb.statistics.samplers.AbstractSampler._abc_registry	csb.statistics.samplers.AbstractSampler-class.html#_abc_registry
csb.statistics.samplers.mc.multichain.AbstractExchangeMC	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html
csb.statistics.samplers.AbstractSampler.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.AbstractSampler._abc_negative_cache	csb.statistics.samplers.AbstractSampler-class.html#_abc_negative_cache
csb.statistics.samplers.mc.multichain.AbstractExchangeMC.param_infos	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#param_infos
csb.statistics.samplers.mc.multichain.AbstractEnsembleMC.sample	csb.statistics.samplers.mc.multichain.AbstractEnsembleMC-class.html#sample
csb.statistics.samplers.mc.multichain.AbstractExchangeMC._propose_swap	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#_propose_swap
csb.statistics.samplers.mc.multichain.AbstractExchangeMC.__init__	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#__init__
csb.statistics.samplers.AbstractSampler._abc_cache	csb.statistics.samplers.AbstractSampler-class.html#_abc_cache
csb.statistics.samplers.mc.multichain.AbstractExchangeMC.statistics	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#statistics
csb.statistics.samplers.mc.multichain.AbstractExchangeMC.__abstractmethods__	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#__abstractmethods__
csb.statistics.samplers.mc.AbstractMC.state	csb.statistics.samplers.mc.AbstractMC-class.html#state
csb.statistics.samplers.mc.multichain.AbstractExchangeMC.swap	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#swap
csb.statistics.samplers.mc.multichain.AbstractEnsembleMC.energy	csb.statistics.samplers.mc.multichain.AbstractEnsembleMC-class.html#energy
csb.statistics.samplers.mc.multichain.AbstractExchangeMC._calc_pacc_swap	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#_calc_pacc_swap
csb.statistics.samplers.mc.multichain.AbstractExchangeMC.acceptance_rates	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#acceptance_rates
csb.statistics.samplers.mc.multichain.AbstractExchangeMC._checkstate	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#_checkstate
csb.statistics.samplers.mc.multichain.AbstractExchangeMC._update_statistics	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#_update_statistics
csb.statistics.samplers.mc.multichain.AbstractExchangeMC._accept_swap	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#_accept_swap
csb.statistics.samplers.AbstractSampler._abc_negative_cache_version	csb.statistics.samplers.AbstractSampler-class.html#_abc_negative_cache_version
csb.statistics.samplers.AbstractSampler._abc_registry	csb.statistics.samplers.AbstractSampler-class.html#_abc_registry
csb.statistics.samplers.mc.multichain.AbstractRENS	csb.statistics.samplers.mc.multichain.AbstractRENS-class.html
csb.statistics.samplers.AbstractSampler.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.AbstractSampler._abc_negative_cache	csb.statistics.samplers.AbstractSampler-class.html#_abc_negative_cache
csb.statistics.samplers.mc.multichain.AbstractExchangeMC.param_infos	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#param_infos
csb.statistics.samplers.mc.multichain.AbstractRENS._run_traj_generator	csb.statistics.samplers.mc.multichain.AbstractRENS-class.html#_run_traj_generator
csb.statistics.samplers.mc.multichain.AbstractEnsembleMC.sample	csb.statistics.samplers.mc.multichain.AbstractEnsembleMC-class.html#sample
csb.statistics.samplers.mc.multichain.AbstractRENS._propose_swap	csb.statistics.samplers.mc.multichain.AbstractRENS-class.html#_propose_swap
csb.statistics.samplers.mc.multichain.AbstractExchangeMC.__init__	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#__init__
csb.statistics.samplers.AbstractSampler._abc_cache	csb.statistics.samplers.AbstractSampler-class.html#_abc_cache
csb.statistics.samplers.mc.multichain.AbstractExchangeMC.statistics	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#statistics
csb.statistics.samplers.mc.multichain.AbstractRENS._get_init_temperature	csb.statistics.samplers.mc.multichain.AbstractRENS-class.html#_get_init_temperature
csb.statistics.samplers.mc.multichain.AbstractRENS.__abstractmethods__	csb.statistics.samplers.mc.multichain.AbstractRENS-class.html#__abstractmethods__
csb.statistics.samplers.mc.AbstractMC.state	csb.statistics.samplers.mc.AbstractMC-class.html#state
csb.statistics.samplers.mc.multichain.AbstractExchangeMC.swap	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#swap
csb.statistics.samplers.mc.multichain.AbstractEnsembleMC.energy	csb.statistics.samplers.mc.multichain.AbstractEnsembleMC-class.html#energy
csb.statistics.samplers.mc.multichain.AbstractRENS._calc_pacc_swap	csb.statistics.samplers.mc.multichain.AbstractRENS-class.html#_calc_pacc_swap
csb.statistics.samplers.mc.multichain.AbstractExchangeMC.acceptance_rates	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#acceptance_rates
csb.statistics.samplers.mc.multichain.AbstractExchangeMC._checkstate	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#_checkstate
csb.statistics.samplers.mc.multichain.AbstractRENS._propagator_factory	csb.statistics.samplers.mc.multichain.AbstractRENS-class.html#_propagator_factory
csb.statistics.samplers.mc.multichain.AbstractExchangeMC._update_statistics	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#_update_statistics
csb.statistics.samplers.AbstractSampler._abc_registry	csb.statistics.samplers.AbstractSampler-class.html#_abc_registry
csb.statistics.samplers.mc.multichain.AbstractRENS._setup_protocol	csb.statistics.samplers.mc.multichain.AbstractRENS-class.html#_setup_protocol
csb.statistics.samplers.mc.multichain.AbstractExchangeMC._accept_swap	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#_accept_swap
csb.statistics.samplers.AbstractSampler._abc_negative_cache_version	csb.statistics.samplers.AbstractSampler-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.multichain.AbstractRENS._calc_works	csb.statistics.samplers.mc.multichain.AbstractRENS-class.html#_calc_works
csb.statistics.samplers.mc.multichain.AbstractRENSSwapParameterInfo	csb.statistics.samplers.mc.multichain.AbstractRENSSwapParameterInfo-class.html
csb.statistics.samplers.mc.multichain.AbstractRENSSwapParameterInfo.protocol	csb.statistics.samplers.mc.multichain.AbstractRENSSwapParameterInfo-class.html#protocol
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo._abc_negative_cache	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#_abc_negative_cache
csb.statistics.samplers.mc.multichain.AbstractRENSSwapParameterInfo.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.mc.multichain.AbstractRENSSwapParameterInfo.__init__	csb.statistics.samplers.mc.multichain.AbstractRENSSwapParameterInfo-class.html#__init__
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo._abc_cache	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#_abc_cache
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo.sampler1	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#sampler1
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo.sampler2	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#sampler2
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo.__abstractmethods__	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#__abstractmethods__
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo._abc_negative_cache_version	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo._abc_registry	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#_abc_registry
csb.statistics.samplers.mc.multichain.AbstractStepRENS	csb.statistics.samplers.mc.multichain.AbstractStepRENS-class.html
csb.statistics.samplers.AbstractSampler.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.AbstractSampler._abc_negative_cache	csb.statistics.samplers.AbstractSampler-class.html#_abc_negative_cache
csb.statistics.samplers.mc.multichain.AbstractExchangeMC.param_infos	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#param_infos
csb.statistics.samplers.mc.multichain.AbstractStepRENS._run_traj_generator	csb.statistics.samplers.mc.multichain.AbstractStepRENS-class.html#_run_traj_generator
csb.statistics.samplers.mc.multichain.AbstractStepRENS._add_gradients	csb.statistics.samplers.mc.multichain.AbstractStepRENS-class.html#_add_gradients
csb.statistics.samplers.mc.multichain.AbstractStepRENS._setup_propagations	csb.statistics.samplers.mc.multichain.AbstractStepRENS-class.html#_setup_propagations
csb.statistics.samplers.mc.multichain.AbstractEnsembleMC.sample	csb.statistics.samplers.mc.multichain.AbstractEnsembleMC-class.html#sample
csb.statistics.samplers.mc.multichain.AbstractRENS._propose_swap	csb.statistics.samplers.mc.multichain.AbstractRENS-class.html#_propose_swap
csb.statistics.samplers.mc.multichain.AbstractStepRENS.__init__	csb.statistics.samplers.mc.multichain.AbstractStepRENS-class.html#__init__
csb.statistics.samplers.AbstractSampler._abc_cache	csb.statistics.samplers.AbstractSampler-class.html#_abc_cache
csb.statistics.samplers.mc.multichain.AbstractExchangeMC.statistics	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#statistics
csb.statistics.samplers.mc.multichain.AbstractStepRENS._propagator_factory	csb.statistics.samplers.mc.multichain.AbstractStepRENS-class.html#_propagator_factory
csb.statistics.samplers.mc.multichain.AbstractStepRENS.__abstractmethods__	csb.statistics.samplers.mc.multichain.AbstractStepRENS-class.html#__abstractmethods__
csb.statistics.samplers.mc.AbstractMC.state	csb.statistics.samplers.mc.AbstractMC-class.html#state
csb.statistics.samplers.mc.multichain.AbstractExchangeMC.swap	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#swap
csb.statistics.samplers.mc.multichain.AbstractEnsembleMC.energy	csb.statistics.samplers.mc.multichain.AbstractEnsembleMC-class.html#energy
csb.statistics.samplers.mc.multichain.AbstractRENS._calc_pacc_swap	csb.statistics.samplers.mc.multichain.AbstractRENS-class.html#_calc_pacc_swap
csb.statistics.samplers.mc.multichain.AbstractExchangeMC.acceptance_rates	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#acceptance_rates
csb.statistics.samplers.mc.multichain.AbstractExchangeMC._checkstate	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#_checkstate
csb.statistics.samplers.mc.multichain.AbstractRENS._get_init_temperature	csb.statistics.samplers.mc.multichain.AbstractRENS-class.html#_get_init_temperature
csb.statistics.samplers.mc.multichain.AbstractExchangeMC._update_statistics	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#_update_statistics
csb.statistics.samplers.AbstractSampler._abc_registry	csb.statistics.samplers.AbstractSampler-class.html#_abc_registry
csb.statistics.samplers.mc.multichain.AbstractStepRENS._setup_stepwise_protocol	csb.statistics.samplers.mc.multichain.AbstractStepRENS-class.html#_setup_stepwise_protocol
csb.statistics.samplers.mc.multichain.AbstractRENS._setup_protocol	csb.statistics.samplers.mc.multichain.AbstractRENS-class.html#_setup_protocol
csb.statistics.samplers.mc.multichain.AbstractExchangeMC._accept_swap	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#_accept_swap
csb.statistics.samplers.AbstractSampler._abc_negative_cache_version	csb.statistics.samplers.AbstractSampler-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.multichain.AbstractRENS._calc_works	csb.statistics.samplers.mc.multichain.AbstractRENS-class.html#_calc_works
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator._abc_negative_cache	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#_abc_negative_cache
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator.__init__	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#__init__
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator._abc_cache	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#_abc_cache
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator.traj12	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#traj12
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator.sampler1	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#sampler1
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator.sampler2	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#sampler2
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator.__abstractmethods__	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#__abstractmethods__
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator.param_info	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#param_info
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator.accepted	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#accepted
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator.traj21	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#traj21
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator._abc_negative_cache_version	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator._abc_registry	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#_abc_registry
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator.acceptance_probability	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#acceptance_probability
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo._abc_negative_cache	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#_abc_negative_cache
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo.__init__	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#__init__
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo._abc_cache	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#_abc_cache
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo.sampler1	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#sampler1
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo.sampler2	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#sampler2
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo.__abstractmethods__	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#__abstractmethods__
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo._abc_negative_cache_version	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo._abc_registry	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#_abc_registry
csb.statistics.samplers.mc.multichain.AbstractSwapScheme	csb.statistics.samplers.mc.multichain.AbstractSwapScheme-class.html
csb.statistics.samplers.mc.multichain.AbstractSwapScheme._abc_cache	csb.statistics.samplers.mc.multichain.AbstractSwapScheme-class.html#_abc_cache
csb.statistics.samplers.mc.multichain.AbstractSwapScheme.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.mc.multichain.AbstractSwapScheme._abc_negative_cache	csb.statistics.samplers.mc.multichain.AbstractSwapScheme-class.html#_abc_negative_cache
csb.statistics.samplers.mc.multichain.AbstractSwapScheme.__abstractmethods__	csb.statistics.samplers.mc.multichain.AbstractSwapScheme-class.html#__abstractmethods__
csb.statistics.samplers.mc.multichain.AbstractSwapScheme.swap_all	csb.statistics.samplers.mc.multichain.AbstractSwapScheme-class.html#swap_all
csb.statistics.samplers.mc.multichain.AbstractSwapScheme._abc_negative_cache_version	csb.statistics.samplers.mc.multichain.AbstractSwapScheme-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.multichain.AbstractSwapScheme._abc_registry	csb.statistics.samplers.mc.multichain.AbstractSwapScheme-class.html#_abc_registry
csb.statistics.samplers.mc.multichain.AbstractSwapScheme.__init__	csb.statistics.samplers.mc.multichain.AbstractSwapScheme-class.html#__init__
csb.statistics.samplers.mc.multichain.AlternatingAdjacentSwapScheme	csb.statistics.samplers.mc.multichain.AlternatingAdjacentSwapScheme-class.html
csb.statistics.samplers.mc.multichain.AbstractSwapScheme.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.mc.multichain.AbstractSwapScheme._abc_negative_cache	csb.statistics.samplers.mc.multichain.AbstractSwapScheme-class.html#_abc_negative_cache
csb.statistics.samplers.mc.multichain.AlternatingAdjacentSwapScheme.swap_all	csb.statistics.samplers.mc.multichain.AlternatingAdjacentSwapScheme-class.html#swap_all
csb.statistics.samplers.mc.multichain.AlternatingAdjacentSwapScheme.__init__	csb.statistics.samplers.mc.multichain.AlternatingAdjacentSwapScheme-class.html#__init__
csb.statistics.samplers.mc.multichain.AbstractSwapScheme._abc_cache	csb.statistics.samplers.mc.multichain.AbstractSwapScheme-class.html#_abc_cache
csb.statistics.samplers.mc.multichain.AlternatingAdjacentSwapScheme.__abstractmethods__	csb.statistics.samplers.mc.multichain.AlternatingAdjacentSwapScheme-class.html#__abstractmethods__
csb.statistics.samplers.mc.multichain.AlternatingAdjacentSwapScheme._create_swap_lists	csb.statistics.samplers.mc.multichain.AlternatingAdjacentSwapScheme-class.html#_create_swap_lists
csb.statistics.samplers.mc.multichain.AbstractSwapScheme._abc_negative_cache_version	csb.statistics.samplers.mc.multichain.AbstractSwapScheme-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.multichain.AbstractSwapScheme._abc_registry	csb.statistics.samplers.mc.multichain.AbstractSwapScheme-class.html#_abc_registry
csb.statistics.samplers.mc.multichain.Gradient	csb.statistics.samplers.mc.multichain.Gradient-class.html
csb.numeric.integrators.AbstractGradient.__metaclass__	abc.ABCMeta-class.html
csb.numeric.integrators.AbstractGradient._abc_negative_cache	csb.numeric.integrators.AbstractGradient-class.html#_abc_negative_cache
csb.statistics.samplers.mc.multichain.Gradient.__init__	csb.statistics.samplers.mc.multichain.Gradient-class.html#__init__
csb.numeric.integrators.AbstractGradient._abc_cache	csb.numeric.integrators.AbstractGradient-class.html#_abc_cache
csb.statistics.samplers.mc.multichain.Gradient.__abstractmethods__	csb.statistics.samplers.mc.multichain.Gradient-class.html#__abstractmethods__
csb.numeric.integrators.AbstractGradient.__call__	csb.numeric.integrators.AbstractGradient-class.html#__call__
csb.statistics.samplers.mc.multichain.Gradient.evaluate	csb.statistics.samplers.mc.multichain.Gradient-class.html#evaluate
csb.numeric.integrators.AbstractGradient._abc_negative_cache_version	csb.numeric.integrators.AbstractGradient-class.html#_abc_negative_cache_version
csb.numeric.integrators.AbstractGradient._abc_registry	csb.numeric.integrators.AbstractGradient-class.html#_abc_registry
csb.statistics.samplers.mc.multichain.HMCStepRENS	csb.statistics.samplers.mc.multichain.HMCStepRENS-class.html
csb.statistics.samplers.AbstractSampler.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.AbstractSampler._abc_negative_cache	csb.statistics.samplers.AbstractSampler-class.html#_abc_negative_cache
csb.statistics.samplers.mc.multichain.AbstractExchangeMC.param_infos	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#param_infos
csb.statistics.samplers.mc.multichain.AbstractStepRENS._run_traj_generator	csb.statistics.samplers.mc.multichain.AbstractStepRENS-class.html#_run_traj_generator
csb.statistics.samplers.mc.multichain.HMCStepRENS._add_gradients	csb.statistics.samplers.mc.multichain.HMCStepRENS-class.html#_add_gradients
csb.statistics.samplers.mc.multichain.HMCStepRENS._setup_propagations	csb.statistics.samplers.mc.multichain.HMCStepRENS-class.html#_setup_propagations
csb.statistics.samplers.mc.multichain.AbstractEnsembleMC.sample	csb.statistics.samplers.mc.multichain.AbstractEnsembleMC-class.html#sample
csb.statistics.samplers.mc.multichain.AbstractRENS._propose_swap	csb.statistics.samplers.mc.multichain.AbstractRENS-class.html#_propose_swap
csb.statistics.samplers.mc.multichain.HMCStepRENS.__init__	csb.statistics.samplers.mc.multichain.HMCStepRENS-class.html#__init__
csb.statistics.samplers.AbstractSampler._abc_cache	csb.statistics.samplers.AbstractSampler-class.html#_abc_cache
csb.statistics.samplers.mc.multichain.AbstractExchangeMC.statistics	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#statistics
csb.statistics.samplers.mc.multichain.AbstractStepRENS._propagator_factory	csb.statistics.samplers.mc.multichain.AbstractStepRENS-class.html#_propagator_factory
csb.statistics.samplers.mc.multichain.HMCStepRENS.__abstractmethods__	csb.statistics.samplers.mc.multichain.HMCStepRENS-class.html#__abstractmethods__
csb.statistics.samplers.mc.AbstractMC.state	csb.statistics.samplers.mc.AbstractMC-class.html#state
csb.statistics.samplers.mc.multichain.AbstractExchangeMC.swap	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#swap
csb.statistics.samplers.mc.multichain.AbstractEnsembleMC.energy	csb.statistics.samplers.mc.multichain.AbstractEnsembleMC-class.html#energy
csb.statistics.samplers.mc.multichain.AbstractRENS._calc_pacc_swap	csb.statistics.samplers.mc.multichain.AbstractRENS-class.html#_calc_pacc_swap
csb.statistics.samplers.mc.multichain.AbstractExchangeMC.acceptance_rates	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#acceptance_rates
csb.statistics.samplers.mc.multichain.AbstractExchangeMC._checkstate	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#_checkstate
csb.statistics.samplers.mc.multichain.AbstractRENS._get_init_temperature	csb.statistics.samplers.mc.multichain.AbstractRENS-class.html#_get_init_temperature
csb.statistics.samplers.mc.multichain.AbstractExchangeMC._update_statistics	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#_update_statistics
csb.statistics.samplers.AbstractSampler._abc_registry	csb.statistics.samplers.AbstractSampler-class.html#_abc_registry
csb.statistics.samplers.mc.multichain.AbstractStepRENS._setup_stepwise_protocol	csb.statistics.samplers.mc.multichain.AbstractStepRENS-class.html#_setup_stepwise_protocol
csb.statistics.samplers.mc.multichain.AbstractRENS._setup_protocol	csb.statistics.samplers.mc.multichain.AbstractRENS-class.html#_setup_protocol
csb.statistics.samplers.mc.multichain.AbstractExchangeMC._accept_swap	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#_accept_swap
csb.statistics.samplers.AbstractSampler._abc_negative_cache_version	csb.statistics.samplers.AbstractSampler-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.multichain.HMCStepRENS._calc_works	csb.statistics.samplers.mc.multichain.HMCStepRENS-class.html#_calc_works
csb.statistics.samplers.mc.multichain.HMCStepRENSSwapParameterInfo	csb.statistics.samplers.mc.multichain.HMCStepRENSSwapParameterInfo-class.html
csb.statistics.samplers.mc.multichain.AbstractRENSSwapParameterInfo.protocol	csb.statistics.samplers.mc.multichain.AbstractRENSSwapParameterInfo-class.html#protocol
csb.statistics.samplers.mc.multichain.HMCStepRENSSwapParameterInfo.timestep	csb.statistics.samplers.mc.multichain.HMCStepRENSSwapParameterInfo-class.html#timestep
csb.statistics.samplers.mc.multichain.HMCStepRENSSwapParameterInfo.intermediate_steps	csb.statistics.samplers.mc.multichain.HMCStepRENSSwapParameterInfo-class.html#intermediate_steps
csb.statistics.samplers.mc.multichain.HMCStepRENSSwapParameterInfo.mass_matrix	csb.statistics.samplers.mc.multichain.HMCStepRENSSwapParameterInfo-class.html#mass_matrix
csb.statistics.samplers.mc.multichain.AbstractRENSSwapParameterInfo.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo._abc_negative_cache	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#_abc_negative_cache
csb.statistics.samplers.mc.multichain.HMCStepRENSSwapParameterInfo.__init__	csb.statistics.samplers.mc.multichain.HMCStepRENSSwapParameterInfo-class.html#__init__
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo._abc_cache	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#_abc_cache
csb.statistics.samplers.mc.multichain.HMCStepRENSSwapParameterInfo.gradient	csb.statistics.samplers.mc.multichain.HMCStepRENSSwapParameterInfo-class.html#gradient
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo.sampler1	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#sampler1
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo.sampler2	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#sampler2
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo.__abstractmethods__	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#__abstractmethods__
csb.statistics.samplers.mc.multichain.HMCStepRENSSwapParameterInfo.integrator	csb.statistics.samplers.mc.multichain.HMCStepRENSSwapParameterInfo-class.html#integrator
csb.statistics.samplers.mc.multichain.HMCStepRENSSwapParameterInfo.hmc_traj_length	csb.statistics.samplers.mc.multichain.HMCStepRENSSwapParameterInfo-class.html#hmc_traj_length
csb.statistics.samplers.mc.multichain.HMCStepRENSSwapParameterInfo.hmc_iterations	csb.statistics.samplers.mc.multichain.HMCStepRENSSwapParameterInfo-class.html#hmc_iterations
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo._abc_negative_cache_version	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo._abc_registry	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#_abc_registry
csb.statistics.samplers.mc.multichain.InterpolationFactory	csb.statistics.samplers.mc.multichain.InterpolationFactory-class.html
csb.statistics.samplers.mc.multichain.InterpolationFactory.tau	csb.statistics.samplers.mc.multichain.InterpolationFactory-class.html#tau
csb.statistics.samplers.mc.multichain.InterpolationFactory.protocol	csb.statistics.samplers.mc.multichain.InterpolationFactory-class.html#protocol
csb.statistics.samplers.mc.multichain.InterpolationFactory.build_temperature	csb.statistics.samplers.mc.multichain.InterpolationFactory-class.html#build_temperature
csb.statistics.samplers.mc.multichain.InterpolationFactory.build_gradient	csb.statistics.samplers.mc.multichain.InterpolationFactory-class.html#build_gradient
csb.statistics.samplers.mc.multichain.InterpolationFactory.__init__	csb.statistics.samplers.mc.multichain.InterpolationFactory-class.html#__init__
csb.statistics.samplers.mc.multichain.MDRENS	csb.statistics.samplers.mc.multichain.MDRENS-class.html
csb.statistics.samplers.AbstractSampler.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.AbstractSampler._abc_negative_cache	csb.statistics.samplers.AbstractSampler-class.html#_abc_negative_cache
csb.statistics.samplers.mc.multichain.AbstractExchangeMC.param_infos	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#param_infos
csb.statistics.samplers.mc.multichain.AbstractRENS._run_traj_generator	csb.statistics.samplers.mc.multichain.AbstractRENS-class.html#_run_traj_generator
csb.statistics.samplers.mc.multichain.AbstractEnsembleMC.sample	csb.statistics.samplers.mc.multichain.AbstractEnsembleMC-class.html#sample
csb.statistics.samplers.mc.multichain.AbstractRENS._propose_swap	csb.statistics.samplers.mc.multichain.AbstractRENS-class.html#_propose_swap
csb.statistics.samplers.mc.multichain.MDRENS.__init__	csb.statistics.samplers.mc.multichain.MDRENS-class.html#__init__
csb.statistics.samplers.AbstractSampler._abc_cache	csb.statistics.samplers.AbstractSampler-class.html#_abc_cache
csb.statistics.samplers.mc.multichain.AbstractExchangeMC.statistics	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#statistics
csb.statistics.samplers.mc.multichain.MDRENS._propagator_factory	csb.statistics.samplers.mc.multichain.MDRENS-class.html#_propagator_factory
csb.statistics.samplers.mc.multichain.MDRENS.__abstractmethods__	csb.statistics.samplers.mc.multichain.MDRENS-class.html#__abstractmethods__
csb.statistics.samplers.mc.AbstractMC.state	csb.statistics.samplers.mc.AbstractMC-class.html#state
csb.statistics.samplers.mc.multichain.AbstractExchangeMC.swap	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#swap
csb.statistics.samplers.mc.multichain.AbstractEnsembleMC.energy	csb.statistics.samplers.mc.multichain.AbstractEnsembleMC-class.html#energy
csb.statistics.samplers.mc.multichain.AbstractRENS._calc_pacc_swap	csb.statistics.samplers.mc.multichain.AbstractRENS-class.html#_calc_pacc_swap
csb.statistics.samplers.mc.multichain.AbstractExchangeMC.acceptance_rates	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#acceptance_rates
csb.statistics.samplers.mc.multichain.AbstractExchangeMC._checkstate	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#_checkstate
csb.statistics.samplers.mc.multichain.AbstractRENS._get_init_temperature	csb.statistics.samplers.mc.multichain.AbstractRENS-class.html#_get_init_temperature
csb.statistics.samplers.mc.multichain.AbstractExchangeMC._update_statistics	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#_update_statistics
csb.statistics.samplers.AbstractSampler._abc_registry	csb.statistics.samplers.AbstractSampler-class.html#_abc_registry
csb.statistics.samplers.mc.multichain.AbstractRENS._setup_protocol	csb.statistics.samplers.mc.multichain.AbstractRENS-class.html#_setup_protocol
csb.statistics.samplers.mc.multichain.AbstractExchangeMC._accept_swap	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#_accept_swap
csb.statistics.samplers.AbstractSampler._abc_negative_cache_version	csb.statistics.samplers.AbstractSampler-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.multichain.MDRENS._calc_works	csb.statistics.samplers.mc.multichain.MDRENS-class.html#_calc_works
csb.statistics.samplers.mc.multichain.MDRENSSwapParameterInfo	csb.statistics.samplers.mc.multichain.MDRENSSwapParameterInfo-class.html
csb.statistics.samplers.mc.multichain.MDRENSSwapParameterInfo.protocol	csb.statistics.samplers.mc.multichain.MDRENSSwapParameterInfo-class.html#protocol
csb.statistics.samplers.mc.multichain.MDRENSSwapParameterInfo.timestep	csb.statistics.samplers.mc.multichain.MDRENSSwapParameterInfo-class.html#timestep
csb.statistics.samplers.mc.multichain.MDRENSSwapParameterInfo.mass_matrix	csb.statistics.samplers.mc.multichain.MDRENSSwapParameterInfo-class.html#mass_matrix
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.mc.multichain.MDRENSSwapParameterInfo.__init__	csb.statistics.samplers.mc.multichain.MDRENSSwapParameterInfo-class.html#__init__
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo._abc_cache	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#_abc_cache
csb.statistics.samplers.mc.multichain.MDRENSSwapParameterInfo.gradient	csb.statistics.samplers.mc.multichain.MDRENSSwapParameterInfo-class.html#gradient
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo.sampler1	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#sampler1
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo.sampler2	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#sampler2
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo.__abstractmethods__	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#__abstractmethods__
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo._abc_negative_cache	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#_abc_negative_cache
csb.statistics.samplers.mc.multichain.MDRENSSwapParameterInfo.traj_length	csb.statistics.samplers.mc.multichain.MDRENSSwapParameterInfo-class.html#traj_length
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo._abc_negative_cache_version	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo._abc_registry	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#_abc_registry
csb.statistics.samplers.mc.multichain.RENSSwapCommunicator	csb.statistics.samplers.mc.multichain.RENSSwapCommunicator-class.html
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator._abc_negative_cache	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#_abc_negative_cache
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator.__init__	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#__init__
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator._abc_cache	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#_abc_cache
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator.traj12	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#traj12
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator.sampler1	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#sampler1
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator.sampler2	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#sampler2
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator.__abstractmethods__	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#__abstractmethods__
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator.param_info	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#param_info
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator.accepted	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#accepted
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator.traj21	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#traj21
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator._abc_negative_cache_version	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator._abc_registry	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#_abc_registry
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator.acceptance_probability	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#acceptance_probability
csb.statistics.samplers.mc.multichain.RENSTrajInfo	csb.statistics.samplers.mc.multichain.RENSTrajInfo-class.html
csb.statistics.samplers.mc.multichain.RENSTrajInfo.init_state	csb.statistics.samplers.mc.multichain.RENSTrajInfo-class.html#init_state
csb.statistics.samplers.mc.multichain.RENSTrajInfo.param_info	csb.statistics.samplers.mc.multichain.RENSTrajInfo-class.html#param_info
csb.statistics.samplers.mc.multichain.RENSTrajInfo.direction	csb.statistics.samplers.mc.multichain.RENSTrajInfo-class.html#direction
csb.statistics.samplers.mc.multichain.RENSTrajInfo.__init__	csb.statistics.samplers.mc.multichain.RENSTrajInfo-class.html#__init__
csb.statistics.samplers.mc.multichain.RESwapCommunicator	csb.statistics.samplers.mc.multichain.RESwapCommunicator-class.html
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator._abc_negative_cache	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#_abc_negative_cache
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator.__init__	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#__init__
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator._abc_cache	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#_abc_cache
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator.traj12	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#traj12
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator.sampler1	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#sampler1
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator.sampler2	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#sampler2
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator.__abstractmethods__	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#__abstractmethods__
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator.param_info	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#param_info
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator.accepted	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#accepted
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator.traj21	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#traj21
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator._abc_negative_cache_version	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator._abc_registry	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#_abc_registry
csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator.acceptance_probability	csb.statistics.samplers.mc.multichain.AbstractSwapCommunicator-class.html#acceptance_probability
csb.statistics.samplers.mc.multichain.RESwapParameterInfo	csb.statistics.samplers.mc.multichain.RESwapParameterInfo-class.html
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo._abc_negative_cache	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#_abc_negative_cache
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo.__init__	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#__init__
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo._abc_cache	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#_abc_cache
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo.sampler1	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#sampler1
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo.sampler2	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#sampler2
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo.__abstractmethods__	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#__abstractmethods__
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo._abc_negative_cache_version	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo._abc_registry	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#_abc_registry
csb.statistics.samplers.mc.multichain.ReplicaExchangeMC	csb.statistics.samplers.mc.multichain.ReplicaExchangeMC-class.html
csb.statistics.samplers.AbstractSampler.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.AbstractSampler._abc_negative_cache	csb.statistics.samplers.AbstractSampler-class.html#_abc_negative_cache
csb.statistics.samplers.mc.multichain.AbstractExchangeMC.param_infos	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#param_infos
csb.statistics.samplers.mc.multichain.AbstractEnsembleMC.sample	csb.statistics.samplers.mc.multichain.AbstractEnsembleMC-class.html#sample
csb.statistics.samplers.mc.multichain.ReplicaExchangeMC._propose_swap	csb.statistics.samplers.mc.multichain.ReplicaExchangeMC-class.html#_propose_swap
csb.statistics.samplers.mc.multichain.AbstractExchangeMC.__init__	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#__init__
csb.statistics.samplers.AbstractSampler._abc_cache	csb.statistics.samplers.AbstractSampler-class.html#_abc_cache
csb.statistics.samplers.mc.multichain.AbstractExchangeMC.statistics	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#statistics
csb.statistics.samplers.mc.multichain.ReplicaExchangeMC.__abstractmethods__	csb.statistics.samplers.mc.multichain.ReplicaExchangeMC-class.html#__abstractmethods__
csb.statistics.samplers.mc.AbstractMC.state	csb.statistics.samplers.mc.AbstractMC-class.html#state
csb.statistics.samplers.mc.multichain.AbstractExchangeMC.swap	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#swap
csb.statistics.samplers.mc.multichain.AbstractEnsembleMC.energy	csb.statistics.samplers.mc.multichain.AbstractEnsembleMC-class.html#energy
csb.statistics.samplers.mc.multichain.ReplicaExchangeMC._calc_pacc_swap	csb.statistics.samplers.mc.multichain.ReplicaExchangeMC-class.html#_calc_pacc_swap
csb.statistics.samplers.mc.multichain.AbstractExchangeMC.acceptance_rates	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#acceptance_rates
csb.statistics.samplers.mc.multichain.AbstractExchangeMC._checkstate	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#_checkstate
csb.statistics.samplers.mc.multichain.AbstractExchangeMC._update_statistics	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#_update_statistics
csb.statistics.samplers.mc.multichain.AbstractExchangeMC._accept_swap	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#_accept_swap
csb.statistics.samplers.AbstractSampler._abc_negative_cache_version	csb.statistics.samplers.AbstractSampler-class.html#_abc_negative_cache_version
csb.statistics.samplers.AbstractSampler._abc_registry	csb.statistics.samplers.AbstractSampler-class.html#_abc_registry
csb.statistics.samplers.mc.multichain.ReplicaHistory	csb.statistics.samplers.mc.multichain.ReplicaHistory-class.html
csb.statistics.samplers.mc.multichain.ReplicaHistory._change_direction	csb.statistics.samplers.mc.multichain.ReplicaHistory-class.html#_change_direction
csb.statistics.samplers.mc.multichain.ReplicaHistory.calculate_history	csb.statistics.samplers.mc.multichain.ReplicaHistory-class.html#calculate_history
csb.statistics.samplers.mc.multichain.ReplicaHistory.calculate_trajectories	csb.statistics.samplers.mc.multichain.ReplicaHistory-class.html#calculate_trajectories
csb.statistics.samplers.mc.multichain.ReplicaHistory.calculate_projected_trajectories	csb.statistics.samplers.mc.multichain.ReplicaHistory-class.html#calculate_projected_trajectories
csb.statistics.samplers.mc.multichain.ReplicaHistory.__init__	csb.statistics.samplers.mc.multichain.ReplicaHistory-class.html#__init__
csb.statistics.samplers.mc.multichain.SingleSwapStatistics	csb.statistics.samplers.mc.multichain.SingleSwapStatistics-class.html
csb.statistics.samplers.mc.multichain.SingleSwapStatistics.total_swaps	csb.statistics.samplers.mc.multichain.SingleSwapStatistics-class.html#total_swaps
csb.statistics.samplers.mc.multichain.SingleSwapStatistics.accepted_swaps	csb.statistics.samplers.mc.multichain.SingleSwapStatistics-class.html#accepted_swaps
csb.statistics.samplers.mc.multichain.SingleSwapStatistics.acceptance_rate	csb.statistics.samplers.mc.multichain.SingleSwapStatistics-class.html#acceptance_rate
csb.statistics.samplers.mc.multichain.SingleSwapStatistics.update	csb.statistics.samplers.mc.multichain.SingleSwapStatistics-class.html#update
csb.statistics.samplers.mc.multichain.SingleSwapStatistics.__init__	csb.statistics.samplers.mc.multichain.SingleSwapStatistics-class.html#__init__
csb.statistics.samplers.mc.multichain.SwapStatistics	csb.statistics.samplers.mc.multichain.SwapStatistics-class.html
csb.statistics.samplers.mc.multichain.SwapStatistics.stats	csb.statistics.samplers.mc.multichain.SwapStatistics-class.html#stats
csb.statistics.samplers.mc.multichain.SwapStatistics.acceptance_rates	csb.statistics.samplers.mc.multichain.SwapStatistics-class.html#acceptance_rates
csb.statistics.samplers.mc.multichain.SwapStatistics.__init__	csb.statistics.samplers.mc.multichain.SwapStatistics-class.html#__init__
csb.statistics.samplers.mc.multichain.ThermostattedMDRENS	csb.statistics.samplers.mc.multichain.ThermostattedMDRENS-class.html
csb.statistics.samplers.AbstractSampler.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.AbstractSampler._abc_negative_cache	csb.statistics.samplers.AbstractSampler-class.html#_abc_negative_cache
csb.statistics.samplers.mc.multichain.AbstractExchangeMC.param_infos	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#param_infos
csb.statistics.samplers.mc.multichain.AbstractRENS._run_traj_generator	csb.statistics.samplers.mc.multichain.AbstractRENS-class.html#_run_traj_generator
csb.statistics.samplers.mc.multichain.AbstractEnsembleMC.sample	csb.statistics.samplers.mc.multichain.AbstractEnsembleMC-class.html#sample
csb.statistics.samplers.mc.multichain.AbstractRENS._propose_swap	csb.statistics.samplers.mc.multichain.AbstractRENS-class.html#_propose_swap
csb.statistics.samplers.mc.multichain.ThermostattedMDRENS.__init__	csb.statistics.samplers.mc.multichain.ThermostattedMDRENS-class.html#__init__
csb.statistics.samplers.AbstractSampler._abc_cache	csb.statistics.samplers.AbstractSampler-class.html#_abc_cache
csb.statistics.samplers.mc.multichain.AbstractExchangeMC.statistics	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#statistics
csb.statistics.samplers.mc.multichain.ThermostattedMDRENS._propagator_factory	csb.statistics.samplers.mc.multichain.ThermostattedMDRENS-class.html#_propagator_factory
csb.statistics.samplers.mc.multichain.MDRENS.__abstractmethods__	csb.statistics.samplers.mc.multichain.MDRENS-class.html#__abstractmethods__
csb.statistics.samplers.mc.AbstractMC.state	csb.statistics.samplers.mc.AbstractMC-class.html#state
csb.statistics.samplers.mc.multichain.AbstractExchangeMC.swap	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#swap
csb.statistics.samplers.mc.multichain.AbstractEnsembleMC.energy	csb.statistics.samplers.mc.multichain.AbstractEnsembleMC-class.html#energy
csb.statistics.samplers.mc.multichain.AbstractRENS._calc_pacc_swap	csb.statistics.samplers.mc.multichain.AbstractRENS-class.html#_calc_pacc_swap
csb.statistics.samplers.mc.multichain.AbstractExchangeMC.acceptance_rates	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#acceptance_rates
csb.statistics.samplers.mc.multichain.AbstractExchangeMC._checkstate	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#_checkstate
csb.statistics.samplers.mc.multichain.AbstractRENS._get_init_temperature	csb.statistics.samplers.mc.multichain.AbstractRENS-class.html#_get_init_temperature
csb.statistics.samplers.mc.multichain.AbstractExchangeMC._update_statistics	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#_update_statistics
csb.statistics.samplers.AbstractSampler._abc_registry	csb.statistics.samplers.AbstractSampler-class.html#_abc_registry
csb.statistics.samplers.mc.multichain.AbstractRENS._setup_protocol	csb.statistics.samplers.mc.multichain.AbstractRENS-class.html#_setup_protocol
csb.statistics.samplers.mc.multichain.AbstractExchangeMC._accept_swap	csb.statistics.samplers.mc.multichain.AbstractExchangeMC-class.html#_accept_swap
csb.statistics.samplers.AbstractSampler._abc_negative_cache_version	csb.statistics.samplers.AbstractSampler-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.multichain.MDRENS._calc_works	csb.statistics.samplers.mc.multichain.MDRENS-class.html#_calc_works
csb.statistics.samplers.mc.multichain.ThermostattedMDRENSSwapParameterInfo	csb.statistics.samplers.mc.multichain.ThermostattedMDRENSSwapParameterInfo-class.html
csb.statistics.samplers.mc.multichain.MDRENSSwapParameterInfo.protocol	csb.statistics.samplers.mc.multichain.MDRENSSwapParameterInfo-class.html#protocol
csb.statistics.samplers.mc.multichain.MDRENSSwapParameterInfo.traj_length	csb.statistics.samplers.mc.multichain.MDRENSSwapParameterInfo-class.html#traj_length
csb.statistics.samplers.mc.multichain.MDRENSSwapParameterInfo.timestep	csb.statistics.samplers.mc.multichain.MDRENSSwapParameterInfo-class.html#timestep
csb.statistics.samplers.mc.multichain.MDRENSSwapParameterInfo.mass_matrix	csb.statistics.samplers.mc.multichain.MDRENSSwapParameterInfo-class.html#mass_matrix
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.mc.multichain.ThermostattedMDRENSSwapParameterInfo.__init__	csb.statistics.samplers.mc.multichain.ThermostattedMDRENSSwapParameterInfo-class.html#__init__
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo._abc_cache	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#_abc_cache
csb.statistics.samplers.mc.multichain.ThermostattedMDRENSSwapParameterInfo.temperature	csb.statistics.samplers.mc.multichain.ThermostattedMDRENSSwapParameterInfo-class.html#temperature
csb.statistics.samplers.mc.multichain.MDRENSSwapParameterInfo.gradient	csb.statistics.samplers.mc.multichain.MDRENSSwapParameterInfo-class.html#gradient
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo.sampler1	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#sampler1
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo.sampler2	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#sampler2
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo.__abstractmethods__	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#__abstractmethods__
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo._abc_negative_cache	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#_abc_negative_cache
csb.statistics.samplers.mc.multichain.ThermostattedMDRENSSwapParameterInfo.collision_probability	csb.statistics.samplers.mc.multichain.ThermostattedMDRENSSwapParameterInfo-class.html#collision_probability
csb.statistics.samplers.mc.multichain.ThermostattedMDRENSSwapParameterInfo.collision_interval	csb.statistics.samplers.mc.multichain.ThermostattedMDRENSSwapParameterInfo-class.html#collision_interval
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo._abc_negative_cache_version	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo._abc_registry	csb.statistics.samplers.mc.multichain.AbstractSwapParameterInfo-class.html#_abc_registry
csb.statistics.samplers.mc.neqsteppropagator.AbstractHeatWorkJacobianLogger	csb.statistics.samplers.mc.neqsteppropagator.AbstractHeatWorkJacobianLogger-class.html
csb.statistics.samplers.mc.neqsteppropagator.AbstractHeatWorkJacobianLogger.work	csb.statistics.samplers.mc.neqsteppropagator.AbstractHeatWorkJacobianLogger-class.html#work
csb.statistics.samplers.mc.neqsteppropagator.AbstractHeatWorkJacobianLogger.heat	csb.statistics.samplers.mc.neqsteppropagator.AbstractHeatWorkJacobianLogger-class.html#heat
csb.statistics.samplers.mc.neqsteppropagator.AbstractHeatWorkJacobianLogger.jacobian	csb.statistics.samplers.mc.neqsteppropagator.AbstractHeatWorkJacobianLogger-class.html#jacobian
csb.statistics.samplers.mc.neqsteppropagator.AbstractHeatWorkJacobianLogger.accumulate	csb.statistics.samplers.mc.neqsteppropagator.AbstractHeatWorkJacobianLogger-class.html#accumulate
csb.statistics.samplers.mc.neqsteppropagator.AbstractHeatWorkJacobianLogger.__init__	csb.statistics.samplers.mc.neqsteppropagator.AbstractHeatWorkJacobianLogger-class.html#__init__
csb.statistics.samplers.mc.neqsteppropagator.AbstractMCPropagation	csb.statistics.samplers.mc.neqsteppropagator.AbstractMCPropagation-class.html
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation._abc_negative_cache	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#_abc_negative_cache
csb.statistics.samplers.mc.neqsteppropagator.AbstractMCPropagation.__init__	csb.statistics.samplers.mc.neqsteppropagator.AbstractMCPropagation-class.html#__init__
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation._abc_cache	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#_abc_cache
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation._propagator_factory	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#_propagator_factory
csb.statistics.samplers.mc.neqsteppropagator.AbstractMCPropagation._run_propagator	csb.statistics.samplers.mc.neqsteppropagator.AbstractMCPropagation-class.html#_run_propagator
csb.statistics.samplers.mc.neqsteppropagator.AbstractMCPropagation.__abstractmethods__	csb.statistics.samplers.mc.neqsteppropagator.AbstractMCPropagation-class.html#__abstractmethods__
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation.param	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#param
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation.__call__	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#__call__
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation._evaluate	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#_evaluate
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation.sys	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#sys
csb.statistics.samplers.mc.neqsteppropagator.AbstractMCPropagation._calculate_heat	csb.statistics.samplers.mc.neqsteppropagator.AbstractMCPropagation-class.html#_calculate_heat
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation.evaluate_heat	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#evaluate_heat
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation._abc_negative_cache_version	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation._abc_registry	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#_abc_registry
csb.statistics.samplers.mc.neqsteppropagator.AbstractMDPropagation	csb.statistics.samplers.mc.neqsteppropagator.AbstractMDPropagation-class.html
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation._abc_negative_cache	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#_abc_negative_cache
csb.statistics.samplers.mc.neqsteppropagator.AbstractMDPropagation.__init__	csb.statistics.samplers.mc.neqsteppropagator.AbstractMDPropagation-class.html#__init__
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation._abc_cache	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#_abc_cache
csb.statistics.samplers.mc.neqsteppropagator.AbstractMDPropagation._augment_state	csb.statistics.samplers.mc.neqsteppropagator.AbstractMDPropagation-class.html#_augment_state
csb.statistics.samplers.mc.neqsteppropagator.AbstractMDPropagation._run_propagator	csb.statistics.samplers.mc.neqsteppropagator.AbstractMDPropagation-class.html#_run_propagator
csb.statistics.samplers.mc.neqsteppropagator.AbstractMDPropagation.__abstractmethods__	csb.statistics.samplers.mc.neqsteppropagator.AbstractMDPropagation-class.html#__abstractmethods__
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation.param	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#param
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation.__call__	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#__call__
csb.statistics.samplers.mc.neqsteppropagator.AbstractMDPropagation._set_mass_matrix	csb.statistics.samplers.mc.neqsteppropagator.AbstractMDPropagation-class.html#_set_mass_matrix
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation._evaluate	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#_evaluate
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation.sys	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#sys
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation._calculate_heat	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#_calculate_heat
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation._propagator_factory	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#_propagator_factory
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation.evaluate_heat	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#evaluate_heat
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation._abc_negative_cache_version	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation._abc_registry	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#_abc_registry
csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation	csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation-class.html
csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation._calculate_work	csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation-class.html#_calculate_work
csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation._abc_negative_cache	csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation-class.html#_abc_negative_cache
csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation.__init__	csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation-class.html#__init__
csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation._abc_cache	csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation-class.html#_abc_cache
csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation._run_perturbator	csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation-class.html#_run_perturbator
csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation._calculate_jacobian	csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation-class.html#_calculate_jacobian
csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation.__abstractmethods__	csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation-class.html#__abstractmethods__
csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation.param	csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation-class.html#param
csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation.__call__	csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation-class.html#__call__
csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation.evaluate_work	csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation-class.html#evaluate_work
csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation._evaluate	csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation-class.html#_evaluate
csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation.sys_after	csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation-class.html#sys_after
csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation._abc_negative_cache_version	csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation.sys_before	csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation-class.html#sys_before
csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation._abc_registry	csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation-class.html#_abc_registry
csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbationParam	csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbationParam-class.html
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation._abc_negative_cache	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#_abc_negative_cache
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation.__init__	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#__init__
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation._abc_cache	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#_abc_cache
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation._propagator_factory	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#_propagator_factory
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation._run_propagator	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#_run_propagator
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation.__abstractmethods__	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#__abstractmethods__
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation.param	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#param
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation.__call__	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#__call__
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation._evaluate	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#_evaluate
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation.sys	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#sys
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation._calculate_heat	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#_calculate_heat
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation.evaluate_heat	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#evaluate_heat
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation._abc_negative_cache_version	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation._abc_registry	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#_abc_registry
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagationParam	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagationParam-class.html
csb.statistics.samplers.mc.neqsteppropagator.AbstractStepStatistics	csb.statistics.samplers.mc.neqsteppropagator.AbstractStepStatistics-class.html
csb.statistics.samplers.mc.neqsteppropagator.AbstractStepStatistics.update	csb.statistics.samplers.mc.neqsteppropagator.AbstractStepStatistics-class.html#update
csb.statistics.samplers.mc.neqsteppropagator.AbstractSystemInfo	csb.statistics.samplers.mc.neqsteppropagator.AbstractSystemInfo-class.html
csb.statistics.samplers.mc.neqsteppropagator.DummyStepStatistics	csb.statistics.samplers.mc.neqsteppropagator.DummyStepStatistics-class.html
csb.statistics.samplers.mc.neqsteppropagator.DummyStepStatistics.update	csb.statistics.samplers.mc.neqsteppropagator.DummyStepStatistics-class.html#update
csb.statistics.samplers.mc.neqsteppropagator.HMCPropagation	csb.statistics.samplers.mc.neqsteppropagator.HMCPropagation-class.html
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation._abc_negative_cache	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#_abc_negative_cache
csb.statistics.samplers.mc.neqsteppropagator.HMCPropagation.__init__	csb.statistics.samplers.mc.neqsteppropagator.HMCPropagation-class.html#__init__
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation._abc_cache	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#_abc_cache
csb.statistics.samplers.mc.neqsteppropagator.HMCPropagation._propagator_factory	csb.statistics.samplers.mc.neqsteppropagator.HMCPropagation-class.html#_propagator_factory
csb.statistics.samplers.mc.neqsteppropagator.AbstractMCPropagation._run_propagator	csb.statistics.samplers.mc.neqsteppropagator.AbstractMCPropagation-class.html#_run_propagator
csb.statistics.samplers.mc.neqsteppropagator.HMCPropagation.__abstractmethods__	csb.statistics.samplers.mc.neqsteppropagator.HMCPropagation-class.html#__abstractmethods__
csb.statistics.samplers.mc.neqsteppropagator.HMCPropagation.param	csb.statistics.samplers.mc.neqsteppropagator.HMCPropagation-class.html#param
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation.__call__	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#__call__
csb.statistics.samplers.mc.neqsteppropagator.HMCPropagation._set_mass_matrix	csb.statistics.samplers.mc.neqsteppropagator.HMCPropagation-class.html#_set_mass_matrix
csb.statistics.samplers.mc.neqsteppropagator.HMCPropagation._evaluate	csb.statistics.samplers.mc.neqsteppropagator.HMCPropagation-class.html#_evaluate
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation.sys	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#sys
csb.statistics.samplers.mc.neqsteppropagator.AbstractMCPropagation._calculate_heat	csb.statistics.samplers.mc.neqsteppropagator.AbstractMCPropagation-class.html#_calculate_heat
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation.evaluate_heat	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#evaluate_heat
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation._abc_negative_cache_version	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation._abc_registry	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#_abc_registry
csb.statistics.samplers.mc.neqsteppropagator.HMCPropagationParam	csb.statistics.samplers.mc.neqsteppropagator.HMCPropagationParam-class.html
csb.statistics.samplers.mc.neqsteppropagator.MDParam.traj_length	csb.statistics.samplers.mc.neqsteppropagator.MDParam-class.html#traj_length
csb.statistics.samplers.mc.neqsteppropagator.MDParam.temperature	csb.statistics.samplers.mc.neqsteppropagator.MDParam-class.html#temperature
csb.statistics.samplers.mc.neqsteppropagator.MDParam.gradient	csb.statistics.samplers.mc.neqsteppropagator.MDParam-class.html#gradient
csb.statistics.samplers.mc.neqsteppropagator.MDParam.integrator	csb.statistics.samplers.mc.neqsteppropagator.MDParam-class.html#integrator
csb.statistics.samplers.mc.neqsteppropagator.HMCPropagationParam.iterations	csb.statistics.samplers.mc.neqsteppropagator.HMCPropagationParam-class.html#iterations
csb.statistics.samplers.mc.neqsteppropagator.MDParam.mass_matrix	csb.statistics.samplers.mc.neqsteppropagator.MDParam-class.html#mass_matrix
csb.statistics.samplers.mc.neqsteppropagator.MDParam.timestep	csb.statistics.samplers.mc.neqsteppropagator.MDParam-class.html#timestep
csb.statistics.samplers.mc.neqsteppropagator.HMCPropagationParam.__init__	csb.statistics.samplers.mc.neqsteppropagator.HMCPropagationParam-class.html#__init__
csb.statistics.samplers.mc.neqsteppropagator.HamiltonianSysInfo	csb.statistics.samplers.mc.neqsteppropagator.HamiltonianSysInfo-class.html
csb.statistics.samplers.mc.neqsteppropagator.HamiltonianSysInfo.hamiltonian	csb.statistics.samplers.mc.neqsteppropagator.HamiltonianSysInfo-class.html#hamiltonian
csb.statistics.samplers.mc.neqsteppropagator.HamiltonianSysInfo.__init__	csb.statistics.samplers.mc.neqsteppropagator.HamiltonianSysInfo-class.html#__init__
csb.statistics.samplers.mc.neqsteppropagator.MDParam	csb.statistics.samplers.mc.neqsteppropagator.MDParam-class.html
csb.statistics.samplers.mc.neqsteppropagator.MDParam.traj_length	csb.statistics.samplers.mc.neqsteppropagator.MDParam-class.html#traj_length
csb.statistics.samplers.mc.neqsteppropagator.MDParam.temperature	csb.statistics.samplers.mc.neqsteppropagator.MDParam-class.html#temperature
csb.statistics.samplers.mc.neqsteppropagator.MDParam.gradient	csb.statistics.samplers.mc.neqsteppropagator.MDParam-class.html#gradient
csb.statistics.samplers.mc.neqsteppropagator.MDParam.integrator	csb.statistics.samplers.mc.neqsteppropagator.MDParam-class.html#integrator
csb.statistics.samplers.mc.neqsteppropagator.MDParam.mass_matrix	csb.statistics.samplers.mc.neqsteppropagator.MDParam-class.html#mass_matrix
csb.statistics.samplers.mc.neqsteppropagator.MDParam.timestep	csb.statistics.samplers.mc.neqsteppropagator.MDParam-class.html#timestep
csb.statistics.samplers.mc.neqsteppropagator.MDParam.__init__	csb.statistics.samplers.mc.neqsteppropagator.MDParam-class.html#__init__
csb.statistics.samplers.mc.neqsteppropagator.MDPropagationParam	csb.statistics.samplers.mc.neqsteppropagator.MDPropagationParam-class.html
csb.statistics.samplers.mc.neqsteppropagator.MDParam.traj_length	csb.statistics.samplers.mc.neqsteppropagator.MDParam-class.html#traj_length
csb.statistics.samplers.mc.neqsteppropagator.MDParam.temperature	csb.statistics.samplers.mc.neqsteppropagator.MDParam-class.html#temperature
csb.statistics.samplers.mc.neqsteppropagator.MDParam.gradient	csb.statistics.samplers.mc.neqsteppropagator.MDParam-class.html#gradient
csb.statistics.samplers.mc.neqsteppropagator.MDParam.timestep	csb.statistics.samplers.mc.neqsteppropagator.MDParam-class.html#timestep
csb.statistics.samplers.mc.neqsteppropagator.MDParam.mass_matrix	csb.statistics.samplers.mc.neqsteppropagator.MDParam-class.html#mass_matrix
csb.statistics.samplers.mc.neqsteppropagator.MDParam.integrator	csb.statistics.samplers.mc.neqsteppropagator.MDParam-class.html#integrator
csb.statistics.samplers.mc.neqsteppropagator.MDParam.__init__	csb.statistics.samplers.mc.neqsteppropagator.MDParam-class.html#__init__
csb.statistics.samplers.mc.neqsteppropagator.NonequilibriumStepPropagator	csb.statistics.samplers.mc.neqsteppropagator.NonequilibriumStepPropagator-class.html
csb.statistics.samplers.mc.neqsteppropagator.NonequilibriumStepPropagator.protocol	csb.statistics.samplers.mc.neqsteppropagator.NonequilibriumStepPropagator-class.html#protocol
csb.statistics.samplers.mc.neqsteppropagator.NonequilibriumStepPropagator._calculate_deltaH	csb.statistics.samplers.mc.neqsteppropagator.NonequilibriumStepPropagator-class.html#_calculate_deltaH
csb.statistics.samplers.mc.propagators.AbstractPropagator._abc_negative_cache	csb.statistics.samplers.mc.propagators.AbstractPropagator-class.html#_abc_negative_cache
csb.statistics.samplers.mc.propagators.AbstractPropagator.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.mc.neqsteppropagator.NonequilibriumStepPropagator.__init__	csb.statistics.samplers.mc.neqsteppropagator.NonequilibriumStepPropagator-class.html#__init__
csb.statistics.samplers.mc.propagators.AbstractPropagator._abc_cache	csb.statistics.samplers.mc.propagators.AbstractPropagator-class.html#_abc_cache
csb.statistics.samplers.mc.neqsteppropagator.NonequilibriumStepPropagator._create_heat_work_jacobian_logger	csb.statistics.samplers.mc.neqsteppropagator.NonequilibriumStepPropagator-class.html#_create_heat_work_jacobian_logger
csb.statistics.samplers.mc.neqsteppropagator.NonequilibriumStepPropagator.__abstractmethods__	csb.statistics.samplers.mc.neqsteppropagator.NonequilibriumStepPropagator-class.html#__abstractmethods__
csb.statistics.samplers.mc.neqsteppropagator.NonequilibriumStepPropagator._perform_step_iteration	csb.statistics.samplers.mc.neqsteppropagator.NonequilibriumStepPropagator-class.html#_perform_step_iteration
csb.statistics.samplers.mc.neqsteppropagator.NonequilibriumStepPropagator._create_step_stats	csb.statistics.samplers.mc.neqsteppropagator.NonequilibriumStepPropagator-class.html#_create_step_stats
csb.statistics.samplers.mc.neqsteppropagator.NonequilibriumStepPropagator.generate	csb.statistics.samplers.mc.neqsteppropagator.NonequilibriumStepPropagator-class.html#generate
csb.statistics.samplers.mc.neqsteppropagator.NonequilibriumStepPropagator._set_initial_extra_info	csb.statistics.samplers.mc.neqsteppropagator.NonequilibriumStepPropagator-class.html#_set_initial_extra_info
csb.statistics.samplers.mc.propagators.AbstractPropagator._abc_negative_cache_version	csb.statistics.samplers.mc.propagators.AbstractPropagator-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.propagators.AbstractPropagator._abc_registry	csb.statistics.samplers.mc.propagators.AbstractPropagator-class.html#_abc_registry
csb.statistics.samplers.mc.neqsteppropagator.NonequilibriumTrajectory	csb.statistics.samplers.mc.neqsteppropagator.NonequilibriumTrajectory-class.html
csb.core.BaseCollectionContainer._exception	csb.core.BaseCollectionContainer-class.html#_exception
csb.statistics.samplers.mc.Trajectory.initial	csb.statistics.samplers.mc.Trajectory-class.html#initial
csb.statistics.samplers.mc.AbstractPropagationResult.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.mc.AbstractPropagationResult._abc_negative_cache	csb.statistics.samplers.mc.AbstractPropagationResult-class.html#_abc_negative_cache
csb.core.BaseCollectionContainer.last_index	csb.core.BaseCollectionContainer-class.html#last_index
csb.core.CollectionContainer._update	csb.core.CollectionContainer-class.html#_update
csb.core.CollectionContainer.append	csb.core.CollectionContainer-class.html#append
csb.statistics.samplers.mc.AbstractPropagationResult._abc_cache	csb.statistics.samplers.mc.AbstractPropagationResult-class.html#_abc_cache
csb.statistics.samplers.mc.neqsteppropagator.NonequilibriumTrajectory.stats	csb.statistics.samplers.mc.neqsteppropagator.NonequilibriumTrajectory-class.html#stats
csb.core.BaseCollectionContainer.__contains__	csb.core.BaseCollectionContainer-class.html#__contains__
csb.statistics.samplers.mc.Trajectory.__abstractmethods__	csb.statistics.samplers.mc.Trajectory-class.html#__abstractmethods__
csb.core.BaseCollectionContainer._getinternal	csb.core.BaseCollectionContainer-class.html#_getinternal
csb.statistics.samplers.mc.neqsteppropagator.NonequilibriumTrajectory.__init__	csb.statistics.samplers.mc.neqsteppropagator.NonequilibriumTrajectory-class.html#__init__
csb.statistics.samplers.mc.neqsteppropagator.NonequilibriumTrajectory.jacobian	csb.statistics.samplers.mc.neqsteppropagator.NonequilibriumTrajectory-class.html#jacobian
csb.statistics.samplers.mc.neqsteppropagator.NonequilibriumTrajectory.deltaH	csb.statistics.samplers.mc.neqsteppropagator.NonequilibriumTrajectory-class.html#deltaH
csb.core.BaseCollectionContainer._update_items	csb.core.BaseCollectionContainer-class.html#_update_items
csb.statistics.samplers.mc.Trajectory.final	csb.statistics.samplers.mc.Trajectory-class.html#final
csb.core.BaseCollectionContainer.__len__	csb.core.BaseCollectionContainer-class.html#__len__
csb.core.BaseCollectionContainer.__getitem__	csb.core.BaseCollectionContainer-class.html#__getitem__
csb.core.BaseCollectionContainer.__iter__	csb.core.BaseCollectionContainer-class.html#__iter__
csb.core.BaseCollectionContainer.__bool__	csb.core.BaseCollectionContainer-class.html#__bool__
csb.core.BaseCollectionContainer.start_index	csb.core.BaseCollectionContainer-class.html#start_index
csb.core.BaseCollectionContainer._append_item	csb.core.BaseCollectionContainer-class.html#_append_item
csb.core.BaseCollectionContainer.__nonzero__	csb.core.BaseCollectionContainer-class.html#__nonzero__
csb.core.BaseCollectionContainer._sort	csb.core.BaseCollectionContainer-class.html#_sort
csb.statistics.samplers.mc.Trajectory.work	csb.statistics.samplers.mc.Trajectory-class.html#work
csb.statistics.samplers.mc.Trajectory.heat	csb.statistics.samplers.mc.Trajectory-class.html#heat
csb.core.BaseCollectionContainer.length	csb.core.BaseCollectionContainer-class.html#length
csb.statistics.samplers.mc.AbstractPropagationResult._abc_negative_cache_version	csb.statistics.samplers.mc.AbstractPropagationResult-class.html#_abc_negative_cache_version
csb.core.BaseCollectionContainer.__repr__	csb.core.BaseCollectionContainer-class.html#__repr__
csb.statistics.samplers.mc.AbstractPropagationResult._abc_registry	csb.statistics.samplers.mc.AbstractPropagationResult-class.html#_abc_registry
csb.statistics.samplers.mc.neqsteppropagator.PerturbationResult	csb.statistics.samplers.mc.neqsteppropagator.PerturbationResult-class.html
csb.core.BaseCollectionContainer._exception	csb.core.BaseCollectionContainer-class.html#_exception
csb.statistics.samplers.mc.Trajectory.initial	csb.statistics.samplers.mc.Trajectory-class.html#initial
csb.statistics.samplers.mc.AbstractPropagationResult.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.mc.AbstractPropagationResult._abc_negative_cache	csb.statistics.samplers.mc.AbstractPropagationResult-class.html#_abc_negative_cache
csb.core.BaseCollectionContainer.last_index	csb.core.BaseCollectionContainer-class.html#last_index
csb.statistics.samplers.mc.neqsteppropagator.PerturbationResult.perturbed_sys	csb.statistics.samplers.mc.neqsteppropagator.PerturbationResult-class.html#perturbed_sys
csb.core.CollectionContainer._update	csb.core.CollectionContainer-class.html#_update
csb.core.CollectionContainer.append	csb.core.CollectionContainer-class.html#append
csb.statistics.samplers.mc.AbstractPropagationResult._abc_cache	csb.statistics.samplers.mc.AbstractPropagationResult-class.html#_abc_cache
csb.core.BaseCollectionContainer.__contains__	csb.core.BaseCollectionContainer-class.html#__contains__
csb.statistics.samplers.mc.Trajectory.__abstractmethods__	csb.statistics.samplers.mc.Trajectory-class.html#__abstractmethods__
csb.core.BaseCollectionContainer._getinternal	csb.core.BaseCollectionContainer-class.html#_getinternal
csb.statistics.samplers.mc.neqsteppropagator.PerturbationResult.__init__	csb.statistics.samplers.mc.neqsteppropagator.PerturbationResult-class.html#__init__
csb.statistics.samplers.mc.neqsteppropagator.PerturbationResult.jacobian	csb.statistics.samplers.mc.neqsteppropagator.PerturbationResult-class.html#jacobian
csb.core.BaseCollectionContainer._update_items	csb.core.BaseCollectionContainer-class.html#_update_items
csb.statistics.samplers.mc.Trajectory.final	csb.statistics.samplers.mc.Trajectory-class.html#final
csb.core.BaseCollectionContainer.__len__	csb.core.BaseCollectionContainer-class.html#__len__
csb.core.BaseCollectionContainer.__getitem__	csb.core.BaseCollectionContainer-class.html#__getitem__
csb.core.BaseCollectionContainer.__iter__	csb.core.BaseCollectionContainer-class.html#__iter__
csb.core.BaseCollectionContainer.__bool__	csb.core.BaseCollectionContainer-class.html#__bool__
csb.core.BaseCollectionContainer.start_index	csb.core.BaseCollectionContainer-class.html#start_index
csb.core.BaseCollectionContainer._append_item	csb.core.BaseCollectionContainer-class.html#_append_item
csb.core.BaseCollectionContainer.__nonzero__	csb.core.BaseCollectionContainer-class.html#__nonzero__
csb.core.BaseCollectionContainer._sort	csb.core.BaseCollectionContainer-class.html#_sort
csb.statistics.samplers.mc.Trajectory.work	csb.statistics.samplers.mc.Trajectory-class.html#work
csb.statistics.samplers.mc.Trajectory.heat	csb.statistics.samplers.mc.Trajectory-class.html#heat
csb.core.BaseCollectionContainer.length	csb.core.BaseCollectionContainer-class.html#length
csb.statistics.samplers.mc.AbstractPropagationResult._abc_negative_cache_version	csb.statistics.samplers.mc.AbstractPropagationResult-class.html#_abc_negative_cache_version
csb.core.BaseCollectionContainer.__repr__	csb.core.BaseCollectionContainer-class.html#__repr__
csb.statistics.samplers.mc.AbstractPropagationResult._abc_registry	csb.statistics.samplers.mc.AbstractPropagationResult-class.html#_abc_registry
csb.statistics.samplers.mc.neqsteppropagator.PlainMDPropagation	csb.statistics.samplers.mc.neqsteppropagator.PlainMDPropagation-class.html
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation._abc_negative_cache	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#_abc_negative_cache
csb.statistics.samplers.mc.neqsteppropagator.PlainMDPropagation.__init__	csb.statistics.samplers.mc.neqsteppropagator.PlainMDPropagation-class.html#__init__
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation._abc_cache	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#_abc_cache
csb.statistics.samplers.mc.neqsteppropagator.AbstractMDPropagation._augment_state	csb.statistics.samplers.mc.neqsteppropagator.AbstractMDPropagation-class.html#_augment_state
csb.statistics.samplers.mc.neqsteppropagator.AbstractMDPropagation._run_propagator	csb.statistics.samplers.mc.neqsteppropagator.AbstractMDPropagation-class.html#_run_propagator
csb.statistics.samplers.mc.neqsteppropagator.PlainMDPropagation.__abstractmethods__	csb.statistics.samplers.mc.neqsteppropagator.PlainMDPropagation-class.html#__abstractmethods__
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation.param	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#param
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation.__call__	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#__call__
csb.statistics.samplers.mc.neqsteppropagator.AbstractMDPropagation._set_mass_matrix	csb.statistics.samplers.mc.neqsteppropagator.AbstractMDPropagation-class.html#_set_mass_matrix
csb.statistics.samplers.mc.neqsteppropagator.PlainMDPropagation._evaluate	csb.statistics.samplers.mc.neqsteppropagator.PlainMDPropagation-class.html#_evaluate
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation.sys	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#sys
csb.statistics.samplers.mc.neqsteppropagator.PlainMDPropagation._calculate_heat	csb.statistics.samplers.mc.neqsteppropagator.PlainMDPropagation-class.html#_calculate_heat
csb.statistics.samplers.mc.neqsteppropagator.PlainMDPropagation._propagator_factory	csb.statistics.samplers.mc.neqsteppropagator.PlainMDPropagation-class.html#_propagator_factory
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation.evaluate_heat	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#evaluate_heat
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation._abc_negative_cache_version	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation._abc_registry	csb.statistics.samplers.mc.neqsteppropagator.AbstractPropagation-class.html#_abc_registry
csb.statistics.samplers.mc.neqsteppropagator.PlainMDPropagationParam	csb.statistics.samplers.mc.neqsteppropagator.PlainMDPropagationParam-class.html
csb.statistics.samplers.mc.neqsteppropagator.MDParam.traj_length	csb.statistics.samplers.mc.neqsteppropagator.MDParam-class.html#traj_length
csb.statistics.samplers.mc.neqsteppropagator.MDParam.temperature	csb.statistics.samplers.mc.neqsteppropagator.MDParam-class.html#temperature
csb.statistics.samplers.mc.neqsteppropagator.MDParam.gradient	csb.statistics.samplers.mc.neqsteppropagator.MDParam-class.html#gradient
csb.statistics.samplers.mc.neqsteppropagator.MDParam.integrator	csb.statistics.samplers.mc.neqsteppropagator.MDParam-class.html#integrator
csb.statistics.samplers.mc.neqsteppropagator.MDParam.mass_matrix	csb.statistics.samplers.mc.neqsteppropagator.MDParam-class.html#mass_matrix
csb.statistics.samplers.mc.neqsteppropagator.MDParam.timestep	csb.statistics.samplers.mc.neqsteppropagator.MDParam-class.html#timestep
csb.statistics.samplers.mc.neqsteppropagator.PlainMDPropagationParam.__init__	csb.statistics.samplers.mc.neqsteppropagator.PlainMDPropagationParam-class.html#__init__
csb.statistics.samplers.mc.neqsteppropagator.Protocol	csb.statistics.samplers.mc.neqsteppropagator.Protocol-class.html
csb.statistics.samplers.mc.neqsteppropagator.Protocol.steps	csb.statistics.samplers.mc.neqsteppropagator.Protocol-class.html#steps
csb.statistics.samplers.mc.neqsteppropagator.Protocol.__init__	csb.statistics.samplers.mc.neqsteppropagator.Protocol-class.html#__init__
csb.statistics.samplers.mc.neqsteppropagator.ReducedHamiltonian	csb.statistics.samplers.mc.neqsteppropagator.ReducedHamiltonian-class.html
csb.statistics.samplers.mc.neqsteppropagator.ReducedHamiltonian.mass_matrix	csb.statistics.samplers.mc.neqsteppropagator.ReducedHamiltonian-class.html#mass_matrix
csb.statistics.samplers.mc.neqsteppropagator.ReducedHamiltonian.__init__	csb.statistics.samplers.mc.neqsteppropagator.ReducedHamiltonian-class.html#__init__
csb.statistics.samplers.mc.neqsteppropagator.ReducedHamiltonian.temperature	csb.statistics.samplers.mc.neqsteppropagator.ReducedHamiltonian-class.html#temperature
csb.statistics.samplers.mc.neqsteppropagator.ReducedHamiltonian.gradient	csb.statistics.samplers.mc.neqsteppropagator.ReducedHamiltonian-class.html#gradient
csb.statistics.samplers.mc.neqsteppropagator.ReducedHamiltonian.__call__	csb.statistics.samplers.mc.neqsteppropagator.ReducedHamiltonian-class.html#__call__
csb.statistics.samplers.mc.neqsteppropagator.ReducedHamiltonian.E	csb.statistics.samplers.mc.neqsteppropagator.ReducedHamiltonian-class.html#E
csb.statistics.samplers.mc.neqsteppropagator.ReducedHamiltonian.log_prob	csb.statistics.samplers.mc.neqsteppropagator.ReducedHamiltonian-class.html#log_prob
csb.statistics.samplers.mc.neqsteppropagator.ReducedHamiltonian.rkinetic_energy	csb.statistics.samplers.mc.neqsteppropagator.ReducedHamiltonian-class.html#rkinetic_energy
csb.statistics.samplers.mc.neqsteppropagator.ReducedHamiltonian.kinetic_energy	csb.statistics.samplers.mc.neqsteppropagator.ReducedHamiltonian-class.html#kinetic_energy
csb.statistics.samplers.mc.neqsteppropagator.ReducedHamiltonian.rlog_prob	csb.statistics.samplers.mc.neqsteppropagator.ReducedHamiltonian-class.html#rlog_prob
csb.statistics.samplers.mc.neqsteppropagator.ReducedHamiltonianPerturbation	csb.statistics.samplers.mc.neqsteppropagator.ReducedHamiltonianPerturbation-class.html
csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.mc.neqsteppropagator.ReducedHamiltonianPerturbation._calculate_work	csb.statistics.samplers.mc.neqsteppropagator.ReducedHamiltonianPerturbation-class.html#_calculate_work
csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation._abc_negative_cache	csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation-class.html#_abc_negative_cache
csb.statistics.samplers.mc.neqsteppropagator.ReducedHamiltonianPerturbation.__init__	csb.statistics.samplers.mc.neqsteppropagator.ReducedHamiltonianPerturbation-class.html#__init__
csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation._abc_cache	csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation-class.html#_abc_cache
csb.statistics.samplers.mc.neqsteppropagator.ReducedHamiltonianPerturbation._run_perturbator	csb.statistics.samplers.mc.neqsteppropagator.ReducedHamiltonianPerturbation-class.html#_run_perturbator
csb.statistics.samplers.mc.neqsteppropagator.ReducedHamiltonianPerturbation._calculate_jacobian	csb.statistics.samplers.mc.neqsteppropagator.ReducedHamiltonianPerturbation-class.html#_calculate_jacobian
csb.statistics.samplers.mc.neqsteppropagator.ReducedHamiltonianPerturbation.__abstractmethods__	csb.statistics.samplers.mc.neqsteppropagator.ReducedHamiltonianPerturbation-class.html#__abstractmethods__
csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation.param	csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation-class.html#param
csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation.__call__	csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation-class.html#__call__
csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation.evaluate_work	csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation-class.html#evaluate_work
csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation._evaluate	csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation-class.html#_evaluate
csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation.sys_after	csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation-class.html#sys_after
csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation._abc_negative_cache_version	csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation.sys_before	csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation-class.html#sys_before
csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation._abc_registry	csb.statistics.samplers.mc.neqsteppropagator.AbstractPerturbation-class.html#_abc_registry
csb.statistics.samplers.mc.neqsteppropagator.Step	csb.statistics.samplers.mc.neqsteppropagator.Step-class.html
csb.statistics.samplers.mc.neqsteppropagator.Step._perform_prop_pert	csb.statistics.samplers.mc.neqsteppropagator.Step-class.html#_perform_prop_pert
csb.statistics.samplers.mc.neqsteppropagator.Step.perturbation	csb.statistics.samplers.mc.neqsteppropagator.Step-class.html#perturbation
csb.statistics.samplers.mc.neqsteppropagator.Step.set_perturbation_first	csb.statistics.samplers.mc.neqsteppropagator.Step-class.html#set_perturbation_first
csb.statistics.samplers.mc.neqsteppropagator.Step.propagation	csb.statistics.samplers.mc.neqsteppropagator.Step-class.html#propagation
csb.statistics.samplers.mc.neqsteppropagator.Step._perform_pert_prop	csb.statistics.samplers.mc.neqsteppropagator.Step-class.html#_perform_pert_prop
csb.statistics.samplers.mc.neqsteppropagator.Step.set_propagation_first	csb.statistics.samplers.mc.neqsteppropagator.Step-class.html#set_propagation_first
csb.statistics.samplers.mc.neqsteppropagator.Step.__init__	csb.statistics.samplers.mc.neqsteppropagator.Step-class.html#__init__
csb.statistics.samplers.mc.neqsteppropagator.TrivialHeatWorkJacobianLogger	csb.statistics.samplers.mc.neqsteppropagator.TrivialHeatWorkJacobianLogger-class.html
csb.statistics.samplers.mc.neqsteppropagator.AbstractHeatWorkJacobianLogger.work	csb.statistics.samplers.mc.neqsteppropagator.AbstractHeatWorkJacobianLogger-class.html#work
csb.statistics.samplers.mc.neqsteppropagator.AbstractHeatWorkJacobianLogger.heat	csb.statistics.samplers.mc.neqsteppropagator.AbstractHeatWorkJacobianLogger-class.html#heat
csb.statistics.samplers.mc.neqsteppropagator.AbstractHeatWorkJacobianLogger.jacobian	csb.statistics.samplers.mc.neqsteppropagator.AbstractHeatWorkJacobianLogger-class.html#jacobian
csb.statistics.samplers.mc.neqsteppropagator.TrivialHeatWorkJacobianLogger.accumulate	csb.statistics.samplers.mc.neqsteppropagator.TrivialHeatWorkJacobianLogger-class.html#accumulate
csb.statistics.samplers.mc.neqsteppropagator.AbstractHeatWorkJacobianLogger.__init__	csb.statistics.samplers.mc.neqsteppropagator.AbstractHeatWorkJacobianLogger-class.html#__init__
csb.statistics.samplers.mc.propagators.AbstractMCPropagator	csb.statistics.samplers.mc.propagators.AbstractMCPropagator-class.html
csb.statistics.samplers.mc.propagators.AbstractPropagator.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.mc.propagators.AbstractPropagator._abc_negative_cache	csb.statistics.samplers.mc.propagators.AbstractPropagator-class.html#_abc_negative_cache
csb.statistics.samplers.mc.propagators.AbstractMCPropagator.__init__	csb.statistics.samplers.mc.propagators.AbstractMCPropagator-class.html#__init__
csb.statistics.samplers.mc.propagators.AbstractPropagator._abc_cache	csb.statistics.samplers.mc.propagators.AbstractPropagator-class.html#_abc_cache
csb.statistics.samplers.mc.propagators.AbstractMCPropagator.__abstractmethods__	csb.statistics.samplers.mc.propagators.AbstractMCPropagator-class.html#__abstractmethods__
csb.statistics.samplers.mc.propagators.AbstractMCPropagator._init_sampler	csb.statistics.samplers.mc.propagators.AbstractMCPropagator-class.html#_init_sampler
csb.statistics.samplers.mc.propagators.AbstractMCPropagator.generate	csb.statistics.samplers.mc.propagators.AbstractMCPropagator-class.html#generate
csb.statistics.samplers.mc.propagators.AbstractMCPropagator.acceptance_rate	csb.statistics.samplers.mc.propagators.AbstractMCPropagator-class.html#acceptance_rate
csb.statistics.samplers.mc.propagators.AbstractPropagator._abc_negative_cache_version	csb.statistics.samplers.mc.propagators.AbstractPropagator-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.propagators.AbstractPropagator._abc_registry	csb.statistics.samplers.mc.propagators.AbstractPropagator-class.html#_abc_registry
csb.statistics.samplers.mc.propagators.AbstractNCMCPropagator	csb.statistics.samplers.mc.propagators.AbstractNCMCPropagator-class.html
csb.statistics.samplers.mc.propagators.AbstractNCMCPropagator.protocol	csb.statistics.samplers.mc.propagators.AbstractNCMCPropagator-class.html#protocol
csb.statistics.samplers.mc.propagators.AbstractPropagator._abc_negative_cache	csb.statistics.samplers.mc.propagators.AbstractPropagator-class.html#_abc_negative_cache
csb.statistics.samplers.mc.propagators.AbstractPropagator.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.mc.propagators.AbstractNCMCPropagator.__init__	csb.statistics.samplers.mc.propagators.AbstractNCMCPropagator-class.html#__init__
csb.statistics.samplers.mc.propagators.AbstractPropagator._abc_cache	csb.statistics.samplers.mc.propagators.AbstractPropagator-class.html#_abc_cache
csb.statistics.samplers.mc.propagators.AbstractNCMCPropagator.reverse_protocol	csb.statistics.samplers.mc.propagators.AbstractNCMCPropagator-class.html#reverse_protocol
csb.statistics.samplers.mc.propagators.AbstractMCPropagator.__abstractmethods__	csb.statistics.samplers.mc.propagators.AbstractMCPropagator-class.html#__abstractmethods__
csb.statistics.samplers.mc.propagators.AbstractMCPropagator._init_sampler	csb.statistics.samplers.mc.propagators.AbstractMCPropagator-class.html#_init_sampler
csb.statistics.samplers.mc.propagators.AbstractMCPropagator.generate	csb.statistics.samplers.mc.propagators.AbstractMCPropagator-class.html#generate
csb.statistics.samplers.mc.propagators.AbstractMCPropagator.acceptance_rate	csb.statistics.samplers.mc.propagators.AbstractMCPropagator-class.html#acceptance_rate
csb.statistics.samplers.mc.propagators.AbstractPropagator._abc_negative_cache_version	csb.statistics.samplers.mc.propagators.AbstractPropagator-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.propagators.AbstractPropagator._abc_registry	csb.statistics.samplers.mc.propagators.AbstractPropagator-class.html#_abc_registry
csb.statistics.samplers.mc.propagators.AbstractPropagator	csb.statistics.samplers.mc.propagators.AbstractPropagator-class.html
csb.statistics.samplers.mc.propagators.AbstractPropagator._abc_cache	csb.statistics.samplers.mc.propagators.AbstractPropagator-class.html#_abc_cache
csb.statistics.samplers.mc.propagators.AbstractPropagator.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.mc.propagators.AbstractPropagator._abc_negative_cache	csb.statistics.samplers.mc.propagators.AbstractPropagator-class.html#_abc_negative_cache
csb.statistics.samplers.mc.propagators.AbstractPropagator.__abstractmethods__	csb.statistics.samplers.mc.propagators.AbstractPropagator-class.html#__abstractmethods__
csb.statistics.samplers.mc.propagators.AbstractPropagator._abc_negative_cache_version	csb.statistics.samplers.mc.propagators.AbstractPropagator-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.propagators.AbstractPropagator._abc_registry	csb.statistics.samplers.mc.propagators.AbstractPropagator-class.html#_abc_registry
csb.statistics.samplers.mc.propagators.AbstractPropagator.generate	csb.statistics.samplers.mc.propagators.AbstractPropagator-class.html#generate
csb.statistics.samplers.mc.propagators.HMCPropagator	csb.statistics.samplers.mc.propagators.HMCPropagator-class.html
csb.statistics.samplers.mc.propagators.AbstractPropagator.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.mc.propagators.AbstractPropagator._abc_negative_cache	csb.statistics.samplers.mc.propagators.AbstractPropagator-class.html#_abc_negative_cache
csb.statistics.samplers.mc.propagators.HMCPropagator.mass_matrix	csb.statistics.samplers.mc.propagators.HMCPropagator-class.html#mass_matrix
csb.statistics.samplers.mc.propagators.HMCPropagator.__init__	csb.statistics.samplers.mc.propagators.HMCPropagator-class.html#__init__
csb.statistics.samplers.mc.propagators.AbstractPropagator._abc_cache	csb.statistics.samplers.mc.propagators.AbstractPropagator-class.html#_abc_cache
csb.statistics.samplers.mc.propagators.HMCPropagator.__abstractmethods__	csb.statistics.samplers.mc.propagators.HMCPropagator-class.html#__abstractmethods__
csb.statistics.samplers.mc.propagators.HMCPropagator._init_sampler	csb.statistics.samplers.mc.propagators.HMCPropagator-class.html#_init_sampler
csb.statistics.samplers.mc.propagators.AbstractMCPropagator.generate	csb.statistics.samplers.mc.propagators.AbstractMCPropagator-class.html#generate
csb.statistics.samplers.mc.propagators.AbstractMCPropagator.acceptance_rate	csb.statistics.samplers.mc.propagators.AbstractMCPropagator-class.html#acceptance_rate
csb.statistics.samplers.mc.propagators.AbstractPropagator._abc_negative_cache_version	csb.statistics.samplers.mc.propagators.AbstractPropagator-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.propagators.AbstractPropagator._abc_registry	csb.statistics.samplers.mc.propagators.AbstractPropagator-class.html#_abc_registry
csb.statistics.samplers.mc.propagators.Looper	csb.statistics.samplers.mc.propagators.Looper-class.html
csb.statistics.samplers.mc.propagators.Looper.next	csb.statistics.samplers.mc.propagators.Looper-class.html#next
csb.statistics.samplers.mc.propagators.Looper.__iter__	csb.statistics.samplers.mc.propagators.Looper-class.html#__iter__
csb.statistics.samplers.mc.propagators.Looper.__init__	csb.statistics.samplers.mc.propagators.Looper-class.html#__init__
csb.statistics.samplers.mc.propagators.MDPropagator	csb.statistics.samplers.mc.propagators.MDPropagator-class.html
csb.statistics.samplers.mc.propagators.AbstractPropagator.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.mc.propagators.MDPropagator.timestep	csb.statistics.samplers.mc.propagators.MDPropagator-class.html#timestep
csb.statistics.samplers.mc.propagators.MDPropagator.mass_matrix	csb.statistics.samplers.mc.propagators.MDPropagator-class.html#mass_matrix
csb.statistics.samplers.mc.propagators.MDPropagator.__init__	csb.statistics.samplers.mc.propagators.MDPropagator-class.html#__init__
csb.statistics.samplers.mc.propagators.AbstractPropagator._abc_cache	csb.statistics.samplers.mc.propagators.AbstractPropagator-class.html#_abc_cache
csb.statistics.samplers.mc.propagators.MDPropagator.gradient	csb.statistics.samplers.mc.propagators.MDPropagator-class.html#gradient
csb.statistics.samplers.mc.propagators.MDPropagator.__abstractmethods__	csb.statistics.samplers.mc.propagators.MDPropagator-class.html#__abstractmethods__
csb.statistics.samplers.mc.propagators.AbstractPropagator._abc_negative_cache	csb.statistics.samplers.mc.propagators.AbstractPropagator-class.html#_abc_negative_cache
csb.statistics.samplers.mc.propagators.MDPropagator.generate	csb.statistics.samplers.mc.propagators.MDPropagator-class.html#generate
csb.statistics.samplers.mc.propagators.AbstractPropagator._abc_negative_cache_version	csb.statistics.samplers.mc.propagators.AbstractPropagator-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.propagators.AbstractPropagator._abc_registry	csb.statistics.samplers.mc.propagators.AbstractPropagator-class.html#_abc_registry
csb.statistics.samplers.mc.propagators.RWMCPropagator	csb.statistics.samplers.mc.propagators.RWMCPropagator-class.html
csb.statistics.samplers.mc.propagators.AbstractPropagator.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.mc.propagators.AbstractPropagator._abc_negative_cache	csb.statistics.samplers.mc.propagators.AbstractPropagator-class.html#_abc_negative_cache
csb.statistics.samplers.mc.propagators.RWMCPropagator.__init__	csb.statistics.samplers.mc.propagators.RWMCPropagator-class.html#__init__
csb.statistics.samplers.mc.propagators.AbstractPropagator._abc_cache	csb.statistics.samplers.mc.propagators.AbstractPropagator-class.html#_abc_cache
csb.statistics.samplers.mc.propagators.RWMCPropagator.__abstractmethods__	csb.statistics.samplers.mc.propagators.RWMCPropagator-class.html#__abstractmethods__
csb.statistics.samplers.mc.propagators.RWMCPropagator._init_sampler	csb.statistics.samplers.mc.propagators.RWMCPropagator-class.html#_init_sampler
csb.statistics.samplers.mc.propagators.AbstractMCPropagator.generate	csb.statistics.samplers.mc.propagators.AbstractMCPropagator-class.html#generate
csb.statistics.samplers.mc.propagators.AbstractMCPropagator.acceptance_rate	csb.statistics.samplers.mc.propagators.AbstractMCPropagator-class.html#acceptance_rate
csb.statistics.samplers.mc.propagators.AbstractPropagator._abc_negative_cache_version	csb.statistics.samplers.mc.propagators.AbstractPropagator-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.propagators.AbstractPropagator._abc_registry	csb.statistics.samplers.mc.propagators.AbstractPropagator-class.html#_abc_registry
csb.statistics.samplers.mc.propagators.ThermostattedMDPropagator	csb.statistics.samplers.mc.propagators.ThermostattedMDPropagator-class.html
csb.statistics.samplers.mc.propagators.ThermostattedMDPropagator._update	csb.statistics.samplers.mc.propagators.ThermostattedMDPropagator-class.html#_update
csb.statistics.samplers.mc.propagators.AbstractPropagator.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.mc.propagators.MDPropagator.timestep	csb.statistics.samplers.mc.propagators.MDPropagator-class.html#timestep
csb.statistics.samplers.mc.propagators.MDPropagator.mass_matrix	csb.statistics.samplers.mc.propagators.MDPropagator-class.html#mass_matrix
csb.statistics.samplers.mc.propagators.ThermostattedMDPropagator.__init__	csb.statistics.samplers.mc.propagators.ThermostattedMDPropagator-class.html#__init__
csb.statistics.samplers.mc.propagators.AbstractPropagator._abc_cache	csb.statistics.samplers.mc.propagators.AbstractPropagator-class.html#_abc_cache
csb.statistics.samplers.mc.propagators.MDPropagator.gradient	csb.statistics.samplers.mc.propagators.MDPropagator-class.html#gradient
csb.statistics.samplers.mc.propagators.MDPropagator.__abstractmethods__	csb.statistics.samplers.mc.propagators.MDPropagator-class.html#__abstractmethods__
csb.statistics.samplers.mc.propagators.AbstractPropagator._abc_negative_cache	csb.statistics.samplers.mc.propagators.AbstractPropagator-class.html#_abc_negative_cache
csb.statistics.samplers.mc.propagators.ThermostattedMDPropagator.generate	csb.statistics.samplers.mc.propagators.ThermostattedMDPropagator-class.html#generate
csb.statistics.samplers.mc.propagators.ThermostattedMDPropagator._step	csb.statistics.samplers.mc.propagators.ThermostattedMDPropagator-class.html#_step
csb.statistics.samplers.mc.propagators.AbstractPropagator._abc_negative_cache_version	csb.statistics.samplers.mc.propagators.AbstractPropagator-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.propagators.AbstractPropagator._abc_registry	csb.statistics.samplers.mc.propagators.AbstractPropagator-class.html#_abc_registry
csb.statistics.samplers.mc.singlechain.AbstractNCMCSampler	csb.statistics.samplers.mc.singlechain.AbstractNCMCSampler-class.html
csb.statistics.samplers.mc.singlechain.AbstractNCMCSampler._accept_proposal	csb.statistics.samplers.mc.singlechain.AbstractNCMCSampler-class.html#_accept_proposal
csb.statistics.samplers.mc.singlechain.AbstractNCMCSampler.protocol	csb.statistics.samplers.mc.singlechain.AbstractNCMCSampler-class.html#protocol
csb.statistics.samplers.AbstractSampler._abc_negative_cache	csb.statistics.samplers.AbstractSampler-class.html#_abc_negative_cache
csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC.energy	csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC-class.html#energy
csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC.sample	csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC-class.html#sample
csb.statistics.samplers.AbstractSampler.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.mc.singlechain.AbstractNCMCSampler.__init__	csb.statistics.samplers.mc.singlechain.AbstractNCMCSampler-class.html#__init__
csb.statistics.samplers.AbstractSampler._abc_cache	csb.statistics.samplers.AbstractSampler-class.html#_abc_cache
csb.statistics.samplers.mc.singlechain.AbstractNCMCSampler.reverse_protocol	csb.statistics.samplers.mc.singlechain.AbstractNCMCSampler-class.html#reverse_protocol
csb.statistics.samplers.mc.singlechain.AbstractNCMCSampler.__abstractmethods__	csb.statistics.samplers.mc.singlechain.AbstractNCMCSampler-class.html#__abstractmethods__
csb.statistics.samplers.mc.AbstractMC.state	csb.statistics.samplers.mc.AbstractMC-class.html#state
csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC._calc_pacc	csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC-class.html#_calc_pacc
csb.statistics.samplers.mc.singlechain.AbstractNCMCSampler._pick_protocol	csb.statistics.samplers.mc.singlechain.AbstractNCMCSampler-class.html#_pick_protocol
csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC._checkstate	csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC-class.html#_checkstate
csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC.temperature	csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC-class.html#temperature
csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC._update_statistics	csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC-class.html#_update_statistics
csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC.acceptance_rate	csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC-class.html#acceptance_rate
csb.statistics.samplers.AbstractSampler._abc_negative_cache_version	csb.statistics.samplers.AbstractSampler-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.singlechain.AbstractNCMCSampler._propose	csb.statistics.samplers.mc.singlechain.AbstractNCMCSampler-class.html#_propose
csb.statistics.samplers.AbstractSampler._abc_registry	csb.statistics.samplers.AbstractSampler-class.html#_abc_registry
csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC.last_move_accepted	csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC-class.html#last_move_accepted
csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC	csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC-class.html
csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC._accept_proposal	csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC-class.html#_accept_proposal
csb.statistics.samplers.AbstractSampler.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.AbstractSampler._abc_negative_cache	csb.statistics.samplers.AbstractSampler-class.html#_abc_negative_cache
csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC.energy	csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC-class.html#energy
csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC.sample	csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC-class.html#sample
csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC.__init__	csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC-class.html#__init__
csb.statistics.samplers.AbstractSampler._abc_cache	csb.statistics.samplers.AbstractSampler-class.html#_abc_cache
csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC.temperature	csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC-class.html#temperature
csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC.__abstractmethods__	csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC-class.html#__abstractmethods__
csb.statistics.samplers.mc.AbstractMC.state	csb.statistics.samplers.mc.AbstractMC-class.html#state
csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC._calc_pacc	csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC-class.html#_calc_pacc
csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC._checkstate	csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC-class.html#_checkstate
csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC._update_statistics	csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC-class.html#_update_statistics
csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC.acceptance_rate	csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC-class.html#acceptance_rate
csb.statistics.samplers.AbstractSampler._abc_negative_cache_version	csb.statistics.samplers.AbstractSampler-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC._propose	csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC-class.html#_propose
csb.statistics.samplers.AbstractSampler._abc_registry	csb.statistics.samplers.AbstractSampler-class.html#_abc_registry
csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC.last_move_accepted	csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC-class.html#last_move_accepted
csb.statistics.samplers.mc.singlechain.HMCSampler	csb.statistics.samplers.mc.singlechain.HMCSampler-class.html
csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC._accept_proposal	csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC-class.html#_accept_proposal
csb.statistics.samplers.AbstractSampler.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.mc.singlechain.HMCSampler.timestep	csb.statistics.samplers.mc.singlechain.HMCSampler-class.html#timestep
csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC.energy	csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC-class.html#energy
csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC.sample	csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC-class.html#sample
csb.statistics.samplers.mc.singlechain.HMCSampler.mass_matrix	csb.statistics.samplers.mc.singlechain.HMCSampler-class.html#mass_matrix
csb.statistics.samplers.mc.singlechain.HMCSampler.__init__	csb.statistics.samplers.mc.singlechain.HMCSampler-class.html#__init__
csb.statistics.samplers.AbstractSampler._abc_cache	csb.statistics.samplers.AbstractSampler-class.html#_abc_cache
csb.statistics.samplers.mc.singlechain.HMCSampler._propagator_factory	csb.statistics.samplers.mc.singlechain.HMCSampler-class.html#_propagator_factory
csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC.temperature	csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC-class.html#temperature
csb.statistics.samplers.mc.singlechain.HMCSampler.__abstractmethods__	csb.statistics.samplers.mc.singlechain.HMCSampler-class.html#__abstractmethods__
csb.statistics.samplers.mc.AbstractMC.state	csb.statistics.samplers.mc.AbstractMC-class.html#state
csb.statistics.samplers.AbstractSampler._abc_negative_cache	csb.statistics.samplers.AbstractSampler-class.html#_abc_negative_cache
csb.statistics.samplers.mc.singlechain.HMCSampler.nsteps	csb.statistics.samplers.mc.singlechain.HMCSampler-class.html#nsteps
csb.statistics.samplers.mc.singlechain.HMCSampler._calc_pacc	csb.statistics.samplers.mc.singlechain.HMCSampler-class.html#_calc_pacc
csb.statistics.samplers.mc.singlechain.HMCSampler._setup_matrices	csb.statistics.samplers.mc.singlechain.HMCSampler-class.html#_setup_matrices
csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC._checkstate	csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC-class.html#_checkstate
csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC._update_statistics	csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC-class.html#_update_statistics
csb.statistics.samplers.mc.singlechain.HMCSampler._hamiltonian	csb.statistics.samplers.mc.singlechain.HMCSampler-class.html#_hamiltonian
csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC.acceptance_rate	csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC-class.html#acceptance_rate
csb.statistics.samplers.AbstractSampler._abc_negative_cache_version	csb.statistics.samplers.AbstractSampler-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.singlechain.HMCSampler._propose	csb.statistics.samplers.mc.singlechain.HMCSampler-class.html#_propose
csb.statistics.samplers.AbstractSampler._abc_registry	csb.statistics.samplers.AbstractSampler-class.html#_abc_registry
csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC.last_move_accepted	csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC-class.html#last_move_accepted
csb.statistics.samplers.mc.singlechain.NCMCProposalCommunicator	csb.statistics.samplers.mc.singlechain.NCMCProposalCommunicator-class.html
csb.statistics.samplers.mc.singlechain.SimpleProposalCommunicator.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.mc.singlechain.SimpleProposalCommunicator._abc_negative_cache	csb.statistics.samplers.mc.singlechain.SimpleProposalCommunicator-class.html#_abc_negative_cache
csb.statistics.samplers.mc.singlechain.SimpleProposalCommunicator.proposal_state	csb.statistics.samplers.mc.singlechain.SimpleProposalCommunicator-class.html#proposal_state
csb.statistics.samplers.mc.singlechain.NCMCProposalCommunicator.__init__	csb.statistics.samplers.mc.singlechain.NCMCProposalCommunicator-class.html#__init__
csb.statistics.samplers.mc.singlechain.SimpleProposalCommunicator._abc_cache	csb.statistics.samplers.mc.singlechain.SimpleProposalCommunicator-class.html#_abc_cache
csb.statistics.samplers.mc.singlechain.SimpleProposalCommunicator.__abstractmethods__	csb.statistics.samplers.mc.singlechain.SimpleProposalCommunicator-class.html#__abstractmethods__
csb.statistics.samplers.mc.singlechain.SimpleProposalCommunicator.current_state	csb.statistics.samplers.mc.singlechain.SimpleProposalCommunicator-class.html#current_state
csb.statistics.samplers.mc.singlechain.SimpleProposalCommunicator._abc_negative_cache_version	csb.statistics.samplers.mc.singlechain.SimpleProposalCommunicator-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.singlechain.SimpleProposalCommunicator._abc_registry	csb.statistics.samplers.mc.singlechain.SimpleProposalCommunicator-class.html#_abc_registry
csb.statistics.samplers.mc.singlechain.RWMCSampler	csb.statistics.samplers.mc.singlechain.RWMCSampler-class.html
csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC._accept_proposal	csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC-class.html#_accept_proposal
csb.statistics.samplers.AbstractSampler.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.AbstractSampler._abc_negative_cache	csb.statistics.samplers.AbstractSampler-class.html#_abc_negative_cache
csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC.energy	csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC-class.html#energy
csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC.sample	csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC-class.html#sample
csb.statistics.samplers.mc.singlechain.RWMCSampler.__init__	csb.statistics.samplers.mc.singlechain.RWMCSampler-class.html#__init__
csb.statistics.samplers.AbstractSampler._abc_cache	csb.statistics.samplers.AbstractSampler-class.html#_abc_cache
csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC.temperature	csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC-class.html#temperature
csb.statistics.samplers.mc.singlechain.RWMCSampler.__abstractmethods__	csb.statistics.samplers.mc.singlechain.RWMCSampler-class.html#__abstractmethods__
csb.statistics.samplers.mc.AbstractMC.state	csb.statistics.samplers.mc.AbstractMC-class.html#state
csb.statistics.samplers.mc.singlechain.RWMCSampler._calc_pacc	csb.statistics.samplers.mc.singlechain.RWMCSampler-class.html#_calc_pacc
csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC._checkstate	csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC-class.html#_checkstate
csb.statistics.samplers.mc.singlechain.RWMCSampler.stepsize	csb.statistics.samplers.mc.singlechain.RWMCSampler-class.html#stepsize
csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC._update_statistics	csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC-class.html#_update_statistics
csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC.acceptance_rate	csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC-class.html#acceptance_rate
csb.statistics.samplers.AbstractSampler._abc_negative_cache_version	csb.statistics.samplers.AbstractSampler-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.singlechain.RWMCSampler._propose	csb.statistics.samplers.mc.singlechain.RWMCSampler-class.html#_propose
csb.statistics.samplers.AbstractSampler._abc_registry	csb.statistics.samplers.AbstractSampler-class.html#_abc_registry
csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC.last_move_accepted	csb.statistics.samplers.mc.singlechain.AbstractSingleChainMC-class.html#last_move_accepted
csb.statistics.samplers.mc.singlechain.SimpleProposalCommunicator	csb.statistics.samplers.mc.singlechain.SimpleProposalCommunicator-class.html
csb.statistics.samplers.mc.singlechain.SimpleProposalCommunicator.__metaclass__	abc.ABCMeta-class.html
csb.statistics.samplers.mc.singlechain.SimpleProposalCommunicator._abc_negative_cache	csb.statistics.samplers.mc.singlechain.SimpleProposalCommunicator-class.html#_abc_negative_cache
csb.statistics.samplers.mc.singlechain.SimpleProposalCommunicator.proposal_state	csb.statistics.samplers.mc.singlechain.SimpleProposalCommunicator-class.html#proposal_state
csb.statistics.samplers.mc.singlechain.SimpleProposalCommunicator.__init__	csb.statistics.samplers.mc.singlechain.SimpleProposalCommunicator-class.html#__init__
csb.statistics.samplers.mc.singlechain.SimpleProposalCommunicator._abc_cache	csb.statistics.samplers.mc.singlechain.SimpleProposalCommunicator-class.html#_abc_cache
csb.statistics.samplers.mc.singlechain.SimpleProposalCommunicator.__abstractmethods__	csb.statistics.samplers.mc.singlechain.SimpleProposalCommunicator-class.html#__abstractmethods__
csb.statistics.samplers.mc.singlechain.SimpleProposalCommunicator.current_state	csb.statistics.samplers.mc.singlechain.SimpleProposalCommunicator-class.html#current_state
csb.statistics.samplers.mc.singlechain.SimpleProposalCommunicator._abc_negative_cache_version	csb.statistics.samplers.mc.singlechain.SimpleProposalCommunicator-class.html#_abc_negative_cache_version
csb.statistics.samplers.mc.singlechain.SimpleProposalCommunicator._abc_registry	csb.statistics.samplers.mc.singlechain.SimpleProposalCommunicator-class.html#_abc_registry
csb.statistics.scalemixture.ARSPosteriorAlpha	csb.statistics.scalemixture.ARSPosteriorAlpha-class.html
csb.statistics.scalemixture.ARSPosteriorAlpha.initial_values	csb.statistics.scalemixture.ARSPosteriorAlpha-class.html#initial_values
csb.statistics.scalemixture.ARSPosteriorAlpha.__call__	csb.statistics.scalemixture.ARSPosteriorAlpha-class.html#__call__
csb.statistics.scalemixture.ARSPosteriorAlpha.__init__	csb.statistics.scalemixture.ARSPosteriorAlpha-class.html#__init__
csb.statistics.scalemixture.GammaPosteriorMAP	csb.statistics.scalemixture.GammaPosteriorMAP-class.html
csb.statistics.pdf.AbstractEstimator.__metaclass__	abc.ABCMeta-class.html
csb.statistics.pdf.AbstractEstimator._abc_negative_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache
csb.statistics.scalemixture.GammaPosteriorMAP.__init__	csb.statistics.scalemixture.GammaPosteriorMAP-class.html#__init__
csb.statistics.pdf.AbstractEstimator._abc_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_cache
csb.statistics.scalemixture.GammaPosteriorMAP.__abstractmethods__	csb.statistics.scalemixture.GammaPosteriorMAP-class.html#__abstractmethods__
csb.statistics.scalemixture.GammaPosteriorMAP.get_scale_estimator	csb.statistics.scalemixture.GammaPosteriorMAP-class.html#get_scale_estimator
csb.statistics.scalemixture.GammaPosteriorMAP.estimate	csb.statistics.scalemixture.GammaPosteriorMAP-class.html#estimate
csb.statistics.pdf.AbstractEstimator._abc_negative_cache_version	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache_version
csb.statistics.pdf.AbstractEstimator._abc_registry	csb.statistics.pdf.AbstractEstimator-class.html#_abc_registry
csb.statistics.scalemixture.GammaPosteriorSampler	csb.statistics.scalemixture.GammaPosteriorSampler-class.html
csb.statistics.pdf.AbstractEstimator.__metaclass__	abc.ABCMeta-class.html
csb.statistics.pdf.AbstractEstimator._abc_negative_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache
csb.statistics.scalemixture.GammaPosteriorSampler.__init__	csb.statistics.scalemixture.GammaPosteriorSampler-class.html#__init__
csb.statistics.pdf.AbstractEstimator._abc_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_cache
csb.statistics.scalemixture.GammaPosteriorSampler.__abstractmethods__	csb.statistics.scalemixture.GammaPosteriorSampler-class.html#__abstractmethods__
csb.statistics.scalemixture.GammaPosteriorSampler.get_scale_estimator	csb.statistics.scalemixture.GammaPosteriorSampler-class.html#get_scale_estimator
csb.statistics.scalemixture.GammaPosteriorSampler.estimate	csb.statistics.scalemixture.GammaPosteriorSampler-class.html#estimate
csb.statistics.pdf.AbstractEstimator._abc_negative_cache_version	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache_version
csb.statistics.pdf.AbstractEstimator._abc_registry	csb.statistics.pdf.AbstractEstimator-class.html#_abc_registry
csb.statistics.scalemixture.GammaPrior	csb.statistics.scalemixture.GammaPrior-class.html
csb.statistics.pdf.AbstractDensity.__metaclass__	abc.ABCMeta-class.html
csb.statistics.pdf.Gamma._validate	csb.statistics.pdf.Gamma-class.html#_validate
csb.statistics.pdf.AbstractDensity._abc_negative_cache	csb.statistics.pdf.AbstractDensity-class.html#_abc_negative_cache
csb.statistics.pdf.AbstractDensity.__str__	csb.statistics.pdf.AbstractDensity-class.html#__str__
csb.statistics.pdf.Gamma.random	csb.statistics.pdf.Gamma-class.html#random
csb.statistics.scalemixture.GammaPrior.__init__	csb.statistics.scalemixture.GammaPrior-class.html#__init__
csb.statistics.pdf.AbstractDensity._abc_cache	csb.statistics.pdf.AbstractDensity-class.html#_abc_cache
csb.statistics.pdf.AbstractDensity.parameters	csb.statistics.pdf.AbstractDensity-class.html#parameters
csb.statistics.pdf.Gamma.__abstractmethods__	csb.statistics.pdf.Gamma-class.html#__abstractmethods__
csb.statistics.pdf.AbstractDensity.get_params	csb.statistics.pdf.AbstractDensity-class.html#get_params
csb.statistics.scalemixture.GammaPrior.hyper_beta	csb.statistics.scalemixture.GammaPrior-class.html#hyper_beta
csb.statistics.pdf.AbstractDensity.__call__	csb.statistics.pdf.AbstractDensity-class.html#__call__
csb.statistics.pdf.AbstractDensity.__getitem__	csb.statistics.pdf.AbstractDensity-class.html#__getitem__
csb.statistics.scalemixture.GammaPrior.hyper_alpha	csb.statistics.scalemixture.GammaPrior-class.html#hyper_alpha
csb.statistics.pdf.AbstractDensity.evaluate	csb.statistics.pdf.AbstractDensity-class.html#evaluate
csb.statistics.pdf.AbstractDensity._register	csb.statistics.pdf.AbstractDensity-class.html#_register
csb.statistics.pdf.Gamma.beta	csb.statistics.pdf.Gamma-class.html#beta
csb.statistics.pdf.AbstractDensity.set_params	csb.statistics.pdf.AbstractDensity-class.html#set_params
csb.statistics.scalemixture.GammaPrior.log_prob	csb.statistics.scalemixture.GammaPrior-class.html#log_prob
csb.statistics.pdf.Gamma.alpha	csb.statistics.pdf.Gamma-class.html#alpha
csb.statistics.pdf.AbstractDensity.estimate	csb.statistics.pdf.AbstractDensity-class.html#estimate
csb.statistics.pdf.AbstractDensity.__setitem__	csb.statistics.pdf.AbstractDensity-class.html#__setitem__
csb.statistics.scalemixture.ScaleMixturePrior.scale_estimator	csb.statistics.scalemixture.ScaleMixturePrior-class.html#scale_estimator
csb.statistics.scalemixture.ScaleMixturePrior.estimator	csb.statistics.scalemixture.ScaleMixturePrior-class.html#estimator
csb.statistics.pdf.AbstractDensity._abc_negative_cache_version	csb.statistics.pdf.AbstractDensity-class.html#_abc_negative_cache_version
csb.statistics.pdf.AbstractDensity._abc_registry	csb.statistics.pdf.AbstractDensity-class.html#_abc_registry
csb.statistics.pdf.BaseDensity._set	csb.statistics.pdf.BaseDensity-class.html#_set
csb.statistics.scalemixture.GammaScaleMAP	csb.statistics.scalemixture.GammaScaleMAP-class.html
csb.statistics.pdf.AbstractEstimator._abc_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_cache
csb.statistics.pdf.AbstractEstimator.__metaclass__	abc.ABCMeta-class.html
csb.statistics.pdf.AbstractEstimator._abc_negative_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache
csb.statistics.scalemixture.GammaScaleMAP.__abstractmethods__	csb.statistics.scalemixture.GammaScaleMAP-class.html#__abstractmethods__
csb.statistics.pdf.AbstractEstimator._abc_negative_cache_version	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache_version
csb.statistics.scalemixture.GammaScaleMAP.estimate	csb.statistics.scalemixture.GammaScaleMAP-class.html#estimate
csb.statistics.pdf.AbstractEstimator._abc_registry	csb.statistics.pdf.AbstractEstimator-class.html#_abc_registry
csb.statistics.scalemixture.GammaScaleSampler	csb.statistics.scalemixture.GammaScaleSampler-class.html
csb.statistics.pdf.AbstractEstimator._abc_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_cache
csb.statistics.pdf.AbstractEstimator.__metaclass__	abc.ABCMeta-class.html
csb.statistics.pdf.AbstractEstimator._abc_negative_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache
csb.statistics.scalemixture.GammaScaleSampler.__abstractmethods__	csb.statistics.scalemixture.GammaScaleSampler-class.html#__abstractmethods__
csb.statistics.pdf.AbstractEstimator._abc_negative_cache_version	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache_version
csb.statistics.scalemixture.GammaScaleSampler.estimate	csb.statistics.scalemixture.GammaScaleSampler-class.html#estimate
csb.statistics.pdf.AbstractEstimator._abc_registry	csb.statistics.pdf.AbstractEstimator-class.html#_abc_registry
csb.statistics.scalemixture.InvGammaPosteriorMAP	csb.statistics.scalemixture.InvGammaPosteriorMAP-class.html
csb.statistics.pdf.AbstractEstimator.__metaclass__	abc.ABCMeta-class.html
csb.statistics.pdf.AbstractEstimator._abc_negative_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache
csb.statistics.scalemixture.InvGammaPosteriorMAP.__init__	csb.statistics.scalemixture.InvGammaPosteriorMAP-class.html#__init__
csb.statistics.pdf.AbstractEstimator._abc_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_cache
csb.statistics.scalemixture.InvGammaPosteriorMAP.__abstractmethods__	csb.statistics.scalemixture.InvGammaPosteriorMAP-class.html#__abstractmethods__
csb.statistics.scalemixture.InvGammaPosteriorMAP.get_scale_estimator	csb.statistics.scalemixture.InvGammaPosteriorMAP-class.html#get_scale_estimator
csb.statistics.scalemixture.InvGammaPosteriorMAP.estimate	csb.statistics.scalemixture.InvGammaPosteriorMAP-class.html#estimate
csb.statistics.pdf.AbstractEstimator._abc_negative_cache_version	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache_version
csb.statistics.pdf.AbstractEstimator._abc_registry	csb.statistics.pdf.AbstractEstimator-class.html#_abc_registry
csb.statistics.scalemixture.InvGammaPosteriorSampler	csb.statistics.scalemixture.InvGammaPosteriorSampler-class.html
csb.statistics.pdf.AbstractEstimator.__metaclass__	abc.ABCMeta-class.html
csb.statistics.pdf.AbstractEstimator._abc_negative_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache
csb.statistics.scalemixture.InvGammaPosteriorSampler.__init__	csb.statistics.scalemixture.InvGammaPosteriorSampler-class.html#__init__
csb.statistics.pdf.AbstractEstimator._abc_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_cache
csb.statistics.scalemixture.InvGammaPosteriorSampler.__abstractmethods__	csb.statistics.scalemixture.InvGammaPosteriorSampler-class.html#__abstractmethods__
csb.statistics.scalemixture.InvGammaPosteriorSampler.get_scale_estimator	csb.statistics.scalemixture.InvGammaPosteriorSampler-class.html#get_scale_estimator
csb.statistics.scalemixture.InvGammaPosteriorSampler.estimate	csb.statistics.scalemixture.InvGammaPosteriorSampler-class.html#estimate
csb.statistics.pdf.AbstractEstimator._abc_negative_cache_version	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache_version
csb.statistics.pdf.AbstractEstimator._abc_registry	csb.statistics.pdf.AbstractEstimator-class.html#_abc_registry
csb.statistics.scalemixture.InvGammaPrior	csb.statistics.scalemixture.InvGammaPrior-class.html
csb.statistics.pdf.AbstractDensity.__metaclass__	abc.ABCMeta-class.html
csb.statistics.pdf.InverseGamma._validate	csb.statistics.pdf.InverseGamma-class.html#_validate
csb.statistics.pdf.AbstractDensity._abc_negative_cache	csb.statistics.pdf.AbstractDensity-class.html#_abc_negative_cache
csb.statistics.pdf.AbstractDensity.__str__	csb.statistics.pdf.AbstractDensity-class.html#__str__
csb.statistics.pdf.InverseGamma.random	csb.statistics.pdf.InverseGamma-class.html#random
csb.statistics.scalemixture.InvGammaPrior.__init__	csb.statistics.scalemixture.InvGammaPrior-class.html#__init__
csb.statistics.pdf.AbstractDensity._abc_cache	csb.statistics.pdf.AbstractDensity-class.html#_abc_cache
csb.statistics.pdf.AbstractDensity.parameters	csb.statistics.pdf.AbstractDensity-class.html#parameters
csb.statistics.pdf.InverseGamma.__abstractmethods__	csb.statistics.pdf.InverseGamma-class.html#__abstractmethods__
csb.statistics.pdf.AbstractDensity.get_params	csb.statistics.pdf.AbstractDensity-class.html#get_params
csb.statistics.scalemixture.InvGammaPrior.hyper_beta	csb.statistics.scalemixture.InvGammaPrior-class.html#hyper_beta
csb.statistics.pdf.AbstractDensity.__call__	csb.statistics.pdf.AbstractDensity-class.html#__call__
csb.statistics.pdf.AbstractDensity.__getitem__	csb.statistics.pdf.AbstractDensity-class.html#__getitem__
csb.statistics.scalemixture.InvGammaPrior.hyper_alpha	csb.statistics.scalemixture.InvGammaPrior-class.html#hyper_alpha
csb.statistics.pdf.AbstractDensity.evaluate	csb.statistics.pdf.AbstractDensity-class.html#evaluate
csb.statistics.pdf.AbstractDensity._register	csb.statistics.pdf.AbstractDensity-class.html#_register
csb.statistics.pdf.InverseGamma.beta	csb.statistics.pdf.InverseGamma-class.html#beta
csb.statistics.pdf.AbstractDensity.set_params	csb.statistics.pdf.AbstractDensity-class.html#set_params
csb.statistics.scalemixture.InvGammaPrior.log_prob	csb.statistics.scalemixture.InvGammaPrior-class.html#log_prob
csb.statistics.pdf.InverseGamma.alpha	csb.statistics.pdf.InverseGamma-class.html#alpha
csb.statistics.pdf.AbstractDensity.estimate	csb.statistics.pdf.AbstractDensity-class.html#estimate
csb.statistics.pdf.AbstractDensity.__setitem__	csb.statistics.pdf.AbstractDensity-class.html#__setitem__
csb.statistics.scalemixture.ScaleMixturePrior.scale_estimator	csb.statistics.scalemixture.ScaleMixturePrior-class.html#scale_estimator
csb.statistics.scalemixture.ScaleMixturePrior.estimator	csb.statistics.scalemixture.ScaleMixturePrior-class.html#estimator
csb.statistics.pdf.AbstractDensity._abc_negative_cache_version	csb.statistics.pdf.AbstractDensity-class.html#_abc_negative_cache_version
csb.statistics.pdf.AbstractDensity._abc_registry	csb.statistics.pdf.AbstractDensity-class.html#_abc_registry
csb.statistics.pdf.BaseDensity._set	csb.statistics.pdf.BaseDensity-class.html#_set
csb.statistics.scalemixture.InvGammaScaleMAP	csb.statistics.scalemixture.InvGammaScaleMAP-class.html
csb.statistics.pdf.AbstractEstimator._abc_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_cache
csb.statistics.pdf.AbstractEstimator.__metaclass__	abc.ABCMeta-class.html
csb.statistics.pdf.AbstractEstimator._abc_negative_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache
csb.statistics.scalemixture.InvGammaScaleMAP.__abstractmethods__	csb.statistics.scalemixture.InvGammaScaleMAP-class.html#__abstractmethods__
csb.statistics.pdf.AbstractEstimator._abc_negative_cache_version	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache_version
csb.statistics.scalemixture.InvGammaScaleMAP.estimate	csb.statistics.scalemixture.InvGammaScaleMAP-class.html#estimate
csb.statistics.pdf.AbstractEstimator._abc_registry	csb.statistics.pdf.AbstractEstimator-class.html#_abc_registry
csb.statistics.scalemixture.InvGammaScaleSampler	csb.statistics.scalemixture.InvGammaScaleSampler-class.html
csb.statistics.pdf.AbstractEstimator._abc_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_cache
csb.statistics.pdf.AbstractEstimator.__metaclass__	abc.ABCMeta-class.html
csb.statistics.pdf.AbstractEstimator._abc_negative_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache
csb.statistics.scalemixture.InvGammaScaleSampler.__abstractmethods__	csb.statistics.scalemixture.InvGammaScaleSampler-class.html#__abstractmethods__
csb.statistics.pdf.AbstractEstimator._abc_negative_cache_version	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache_version
csb.statistics.scalemixture.InvGammaScaleSampler.estimate	csb.statistics.scalemixture.InvGammaScaleSampler-class.html#estimate
csb.statistics.pdf.AbstractEstimator._abc_registry	csb.statistics.pdf.AbstractEstimator-class.html#_abc_registry
csb.statistics.scalemixture.ScaleMixture	csb.statistics.scalemixture.ScaleMixture-class.html
csb.statistics.pdf.AbstractDensity.__metaclass__	abc.ABCMeta-class.html
csb.statistics.scalemixture.ScaleMixture.scales	csb.statistics.scalemixture.ScaleMixture-class.html#scales
csb.statistics.pdf.AbstractDensity._validate	csb.statistics.pdf.AbstractDensity-class.html#_validate
csb.statistics.pdf.AbstractDensity._abc_negative_cache	csb.statistics.pdf.AbstractDensity-class.html#_abc_negative_cache
csb.statistics.pdf.AbstractDensity.__str__	csb.statistics.pdf.AbstractDensity-class.html#__str__
csb.statistics.scalemixture.ScaleMixture.random	csb.statistics.scalemixture.ScaleMixture-class.html#random
csb.statistics.scalemixture.ScaleMixture.__init__	csb.statistics.scalemixture.ScaleMixture-class.html#__init__
csb.statistics.pdf.AbstractDensity._abc_cache	csb.statistics.pdf.AbstractDensity-class.html#_abc_cache
csb.statistics.pdf.AbstractDensity.parameters	csb.statistics.pdf.AbstractDensity-class.html#parameters
csb.statistics.scalemixture.ScaleMixture.__abstractmethods__	csb.statistics.scalemixture.ScaleMixture-class.html#__abstractmethods__
csb.statistics.pdf.AbstractDensity.get_params	csb.statistics.pdf.AbstractDensity-class.html#get_params
csb.statistics.pdf.AbstractDensity.__call__	csb.statistics.pdf.AbstractDensity-class.html#__call__
csb.statistics.pdf.AbstractDensity.__getitem__	csb.statistics.pdf.AbstractDensity-class.html#__getitem__
csb.statistics.pdf.AbstractDensity.evaluate	csb.statistics.pdf.AbstractDensity-class.html#evaluate
csb.statistics.pdf.AbstractDensity._register	csb.statistics.pdf.AbstractDensity-class.html#_register
csb.statistics.pdf.AbstractDensity.__setitem__	csb.statistics.pdf.AbstractDensity-class.html#__setitem__
csb.statistics.pdf.AbstractDensity.set_params	csb.statistics.pdf.AbstractDensity-class.html#set_params
csb.statistics.scalemixture.ScaleMixture.log_prob	csb.statistics.scalemixture.ScaleMixture-class.html#log_prob
csb.statistics.pdf.AbstractDensity.estimate	csb.statistics.pdf.AbstractDensity-class.html#estimate
csb.statistics.scalemixture.ScaleMixture.prior	csb.statistics.scalemixture.ScaleMixture-class.html#prior
csb.statistics.pdf.AbstractDensity.estimator	csb.statistics.pdf.AbstractDensity-class.html#estimator
csb.statistics.pdf.AbstractDensity._abc_negative_cache_version	csb.statistics.pdf.AbstractDensity-class.html#_abc_negative_cache_version
csb.statistics.pdf.AbstractDensity._abc_registry	csb.statistics.pdf.AbstractDensity-class.html#_abc_registry
csb.statistics.pdf.BaseDensity._set	csb.statistics.pdf.BaseDensity-class.html#_set
csb.statistics.scalemixture.ScaleMixturePrior	csb.statistics.scalemixture.ScaleMixturePrior-class.html
csb.statistics.scalemixture.ScaleMixturePrior.scale_estimator	csb.statistics.scalemixture.ScaleMixturePrior-class.html#scale_estimator
csb.statistics.scalemixture.ScaleMixturePrior.estimator	csb.statistics.scalemixture.ScaleMixturePrior-class.html#estimator
csb.statistics.scalemixture.ScaleMixturePrior.__init__	csb.statistics.scalemixture.ScaleMixturePrior-class.html#__init__
csb.statistics.scalemixture.ScaleMixturePriorEstimator	csb.statistics.scalemixture.ScaleMixturePriorEstimator-class.html
csb.statistics.pdf.AbstractEstimator.__metaclass__	abc.ABCMeta-class.html
csb.statistics.pdf.AbstractEstimator._abc_negative_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache
csb.statistics.pdf.AbstractEstimator._abc_cache	csb.statistics.pdf.AbstractEstimator-class.html#_abc_cache
csb.statistics.scalemixture.ScaleMixturePriorEstimator.__abstractmethods__	csb.statistics.scalemixture.ScaleMixturePriorEstimator-class.html#__abstractmethods__
csb.statistics.scalemixture.ScaleMixturePriorEstimator.get_scale_estimator	csb.statistics.scalemixture.ScaleMixturePriorEstimator-class.html#get_scale_estimator
csb.statistics.pdf.AbstractEstimator.estimate	csb.statistics.pdf.AbstractEstimator-class.html#estimate
csb.statistics.pdf.AbstractEstimator._abc_negative_cache_version	csb.statistics.pdf.AbstractEstimator-class.html#_abc_negative_cache_version
csb.statistics.pdf.AbstractEstimator._abc_registry	csb.statistics.pdf.AbstractEstimator-class.html#_abc_registry
csb.statmech.ensembles.BoltzmannEnsemble	csb.statmech.ensembles.BoltzmannEnsemble-class.html
csb.statmech.ensembles.StatisticalEnsemble.__metaclass__	abc.ABCMeta-class.html
csb.statmech.ensembles.StatisticalEnsemble._abc_negative_cache	csb.statmech.ensembles.StatisticalEnsemble-class.html#_abc_negative_cache
csb.statmech.ensembles.BoltzmannEnsemble.energy	csb.statmech.ensembles.BoltzmannEnsemble-class.html#energy
csb.statmech.ensembles.BoltzmannEnsemble.__init__	csb.statmech.ensembles.BoltzmannEnsemble-class.html#__init__
csb.statmech.ensembles.StatisticalEnsemble._abc_cache	csb.statmech.ensembles.StatisticalEnsemble-class.html#_abc_cache
csb.statmech.ensembles.StatisticalEnsemble.gradient	csb.statmech.ensembles.StatisticalEnsemble-class.html#gradient
csb.statmech.ensembles.BoltzmannEnsemble.__abstractmethods__	csb.statmech.ensembles.BoltzmannEnsemble-class.html#__abstractmethods__
csb.statmech.ensembles.StatisticalEnsemble.__call__	csb.statmech.ensembles.StatisticalEnsemble-class.html#__call__
csb.statmech.ensembles.BoltzmannEnsemble.beta	csb.statmech.ensembles.BoltzmannEnsemble-class.html#beta
csb.statmech.ensembles.StatisticalEnsemble.log_prob	csb.statmech.ensembles.StatisticalEnsemble-class.html#log_prob
csb.statmech.ensembles.StatisticalEnsemble._abc_negative_cache_version	csb.statmech.ensembles.StatisticalEnsemble-class.html#_abc_negative_cache_version
csb.statmech.ensembles.StatisticalEnsemble._abc_registry	csb.statmech.ensembles.StatisticalEnsemble-class.html#_abc_registry
csb.statmech.ensembles.CompositeEnsemble	csb.statmech.ensembles.CompositeEnsemble-class.html
csb.statmech.ensembles.StatisticalEnsemble.__metaclass__	abc.ABCMeta-class.html
csb.statmech.ensembles.StatisticalEnsemble._abc_negative_cache	csb.statmech.ensembles.StatisticalEnsemble-class.html#_abc_negative_cache
csb.statmech.ensembles.CompositeEnsemble.energy	csb.statmech.ensembles.CompositeEnsemble-class.html#energy
csb.statmech.ensembles.CompositeEnsemble.__init__	csb.statmech.ensembles.CompositeEnsemble-class.html#__init__
csb.statmech.ensembles.StatisticalEnsemble._abc_cache	csb.statmech.ensembles.StatisticalEnsemble-class.html#_abc_cache
csb.statmech.ensembles.CompositeEnsemble.ensembles	csb.statmech.ensembles.CompositeEnsemble-class.html#ensembles
csb.statmech.ensembles.CompositeEnsemble.gradient	csb.statmech.ensembles.CompositeEnsemble-class.html#gradient
csb.statmech.ensembles.CompositeEnsemble.__abstractmethods__	csb.statmech.ensembles.CompositeEnsemble-class.html#__abstractmethods__
csb.statmech.ensembles.StatisticalEnsemble.__call__	csb.statmech.ensembles.StatisticalEnsemble-class.html#__call__
csb.statmech.ensembles.StatisticalEnsemble.log_prob	csb.statmech.ensembles.StatisticalEnsemble-class.html#log_prob
csb.statmech.ensembles.StatisticalEnsemble._abc_negative_cache_version	csb.statmech.ensembles.StatisticalEnsemble-class.html#_abc_negative_cache_version
csb.statmech.ensembles.StatisticalEnsemble._abc_registry	csb.statmech.ensembles.StatisticalEnsemble-class.html#_abc_registry
csb.statmech.ensembles.FermiEnsemble	csb.statmech.ensembles.FermiEnsemble-class.html
csb.statmech.ensembles.StatisticalEnsemble.__metaclass__	abc.ABCMeta-class.html
csb.statmech.ensembles.StatisticalEnsemble._abc_negative_cache	csb.statmech.ensembles.StatisticalEnsemble-class.html#_abc_negative_cache
csb.statmech.ensembles.FermiEnsemble.energy	csb.statmech.ensembles.FermiEnsemble-class.html#energy
csb.statmech.ensembles.FermiEnsemble.__init__	csb.statmech.ensembles.FermiEnsemble-class.html#__init__
csb.statmech.ensembles.StatisticalEnsemble._abc_cache	csb.statmech.ensembles.StatisticalEnsemble-class.html#_abc_cache
csb.statmech.ensembles.StatisticalEnsemble.gradient	csb.statmech.ensembles.StatisticalEnsemble-class.html#gradient
csb.statmech.ensembles.BoltzmannEnsemble.__abstractmethods__	csb.statmech.ensembles.BoltzmannEnsemble-class.html#__abstractmethods__
csb.statmech.ensembles.StatisticalEnsemble.__call__	csb.statmech.ensembles.StatisticalEnsemble-class.html#__call__
csb.statmech.ensembles.BoltzmannEnsemble.beta	csb.statmech.ensembles.BoltzmannEnsemble-class.html#beta
csb.statmech.ensembles.StatisticalEnsemble.log_prob	csb.statmech.ensembles.StatisticalEnsemble-class.html#log_prob
csb.statmech.ensembles.StatisticalEnsemble._abc_negative_cache_version	csb.statmech.ensembles.StatisticalEnsemble-class.html#_abc_negative_cache_version
csb.statmech.ensembles.StatisticalEnsemble._abc_registry	csb.statmech.ensembles.StatisticalEnsemble-class.html#_abc_registry
csb.statmech.ensembles.FermiEnsemble.e_max	csb.statmech.ensembles.FermiEnsemble-class.html#e_max
csb.statmech.ensembles.StatisticalEnsemble	csb.statmech.ensembles.StatisticalEnsemble-class.html
csb.statmech.ensembles.StatisticalEnsemble.__metaclass__	abc.ABCMeta-class.html
csb.statmech.ensembles.StatisticalEnsemble._abc_negative_cache	csb.statmech.ensembles.StatisticalEnsemble-class.html#_abc_negative_cache
csb.statmech.ensembles.StatisticalEnsemble.energy	csb.statmech.ensembles.StatisticalEnsemble-class.html#energy
csb.statmech.ensembles.StatisticalEnsemble._abc_cache	csb.statmech.ensembles.StatisticalEnsemble-class.html#_abc_cache
csb.statmech.ensembles.StatisticalEnsemble.gradient	csb.statmech.ensembles.StatisticalEnsemble-class.html#gradient
csb.statmech.ensembles.StatisticalEnsemble.__abstractmethods__	csb.statmech.ensembles.StatisticalEnsemble-class.html#__abstractmethods__
csb.statmech.ensembles.StatisticalEnsemble.__call__	csb.statmech.ensembles.StatisticalEnsemble-class.html#__call__
csb.statmech.ensembles.StatisticalEnsemble.log_prob	csb.statmech.ensembles.StatisticalEnsemble-class.html#log_prob
csb.statmech.ensembles.StatisticalEnsemble._abc_negative_cache_version	csb.statmech.ensembles.StatisticalEnsemble-class.html#_abc_negative_cache_version
csb.statmech.ensembles.StatisticalEnsemble._abc_registry	csb.statmech.ensembles.StatisticalEnsemble-class.html#_abc_registry
csb.statmech.ensembles.TsallisEnsemble	csb.statmech.ensembles.TsallisEnsemble-class.html
csb.statmech.ensembles.StatisticalEnsemble.__metaclass__	abc.ABCMeta-class.html
csb.statmech.ensembles.StatisticalEnsemble._abc_negative_cache	csb.statmech.ensembles.StatisticalEnsemble-class.html#_abc_negative_cache
csb.statmech.ensembles.TsallisEnsemble.energy	csb.statmech.ensembles.TsallisEnsemble-class.html#energy
csb.statmech.ensembles.TsallisEnsemble.__init__	csb.statmech.ensembles.TsallisEnsemble-class.html#__init__
csb.statmech.ensembles.StatisticalEnsemble._abc_cache	csb.statmech.ensembles.StatisticalEnsemble-class.html#_abc_cache
csb.statmech.ensembles.TsallisEnsemble.e_min	csb.statmech.ensembles.TsallisEnsemble-class.html#e_min
csb.statmech.ensembles.StatisticalEnsemble.gradient	csb.statmech.ensembles.StatisticalEnsemble-class.html#gradient
csb.statmech.ensembles.TsallisEnsemble.__abstractmethods__	csb.statmech.ensembles.TsallisEnsemble-class.html#__abstractmethods__
csb.statmech.ensembles.StatisticalEnsemble.__call__	csb.statmech.ensembles.StatisticalEnsemble-class.html#__call__
csb.statmech.ensembles.StatisticalEnsemble.log_prob	csb.statmech.ensembles.StatisticalEnsemble-class.html#log_prob
csb.statmech.ensembles.TsallisEnsemble.q	csb.statmech.ensembles.TsallisEnsemble-class.html#q
csb.statmech.ensembles.StatisticalEnsemble._abc_negative_cache_version	csb.statmech.ensembles.StatisticalEnsemble-class.html#_abc_negative_cache_version
csb.statmech.ensembles.StatisticalEnsemble._abc_registry	csb.statmech.ensembles.StatisticalEnsemble-class.html#_abc_registry
csb.statmech.wham.AbstractWHAM	csb.statmech.wham.AbstractWHAM-class.html
csb.statmech.wham.AbstractWHAM.__metaclass__	abc.ABCMeta-class.html
csb.statmech.wham.AbstractWHAM._abc_negative_cache	csb.statmech.wham.AbstractWHAM-class.html#_abc_negative_cache
csb.statmech.wham.AbstractWHAM.__init__	csb.statmech.wham.AbstractWHAM-class.html#__init__
csb.statmech.wham.AbstractWHAM.free_energies	csb.statmech.wham.AbstractWHAM-class.html#free_energies
csb.statmech.wham.AbstractWHAM.log_g	csb.statmech.wham.AbstractWHAM-class.html#log_g
csb.statmech.wham.AbstractWHAM.__abstractmethods__	csb.statmech.wham.AbstractWHAM-class.html#__abstractmethods__
csb.statmech.wham.AbstractWHAM.log_z	csb.statmech.wham.AbstractWHAM-class.html#log_z
csb.statmech.wham.AbstractWHAM._abc_cache	csb.statmech.wham.AbstractWHAM-class.html#_abc_cache
csb.statmech.wham.AbstractWHAM.estimate	csb.statmech.wham.AbstractWHAM-class.html#estimate
csb.statmech.wham.AbstractWHAM._stop_criterium	csb.statmech.wham.AbstractWHAM-class.html#_stop_criterium
csb.statmech.wham.AbstractWHAM._abc_negative_cache_version	csb.statmech.wham.AbstractWHAM-class.html#_abc_negative_cache_version
csb.statmech.wham.AbstractWHAM._abc_registry	csb.statmech.wham.AbstractWHAM-class.html#_abc_registry
csb.statmech.wham.NonparametricWHAM	csb.statmech.wham.NonparametricWHAM-class.html
csb.statmech.wham.AbstractWHAM.__metaclass__	abc.ABCMeta-class.html
csb.statmech.wham.AbstractWHAM._abc_negative_cache	csb.statmech.wham.AbstractWHAM-class.html#_abc_negative_cache
csb.statmech.wham.AbstractWHAM.__init__	csb.statmech.wham.AbstractWHAM-class.html#__init__
csb.statmech.wham.AbstractWHAM.free_energies	csb.statmech.wham.AbstractWHAM-class.html#free_energies
csb.statmech.wham.NonparametricWHAM.log_g	csb.statmech.wham.NonparametricWHAM-class.html#log_g
csb.statmech.wham.NonparametricWHAM.__abstractmethods__	csb.statmech.wham.NonparametricWHAM-class.html#__abstractmethods__
csb.statmech.wham.NonparametricWHAM.log_z	csb.statmech.wham.NonparametricWHAM-class.html#log_z
csb.statmech.wham.AbstractWHAM._abc_cache	csb.statmech.wham.AbstractWHAM-class.html#_abc_cache
csb.statmech.wham.NonparametricWHAM.estimate	csb.statmech.wham.NonparametricWHAM-class.html#estimate
csb.statmech.wham.AbstractWHAM._stop_criterium	csb.statmech.wham.AbstractWHAM-class.html#_stop_criterium
csb.statmech.wham.AbstractWHAM._abc_negative_cache_version	csb.statmech.wham.AbstractWHAM-class.html#_abc_negative_cache_version
csb.statmech.wham.AbstractWHAM._abc_registry	csb.statmech.wham.AbstractWHAM-class.html#_abc_registry
csb.statmech.wham.WHAM	csb.statmech.wham.WHAM-class.html
csb.statmech.wham.AbstractWHAM.__metaclass__	abc.ABCMeta-class.html
csb.statmech.wham.AbstractWHAM._abc_negative_cache	csb.statmech.wham.AbstractWHAM-class.html#_abc_negative_cache
csb.statmech.wham.WHAM.__init__	csb.statmech.wham.WHAM-class.html#__init__
csb.statmech.wham.AbstractWHAM.free_energies	csb.statmech.wham.AbstractWHAM-class.html#free_energies
csb.statmech.wham.AbstractWHAM.log_g	csb.statmech.wham.AbstractWHAM-class.html#log_g
csb.statmech.wham.WHAM.__abstractmethods__	csb.statmech.wham.WHAM-class.html#__abstractmethods__
csb.statmech.wham.WHAM.log_z	csb.statmech.wham.WHAM-class.html#log_z
csb.statmech.wham.AbstractWHAM._abc_cache	csb.statmech.wham.AbstractWHAM-class.html#_abc_cache
csb.statmech.wham.WHAM.estimate	csb.statmech.wham.WHAM-class.html#estimate
csb.statmech.wham.AbstractWHAM._stop_criterium	csb.statmech.wham.AbstractWHAM-class.html#_stop_criterium
csb.statmech.wham.AbstractWHAM._abc_negative_cache_version	csb.statmech.wham.AbstractWHAM-class.html#_abc_negative_cache_version
csb.statmech.wham.AbstractWHAM._abc_registry	csb.statmech.wham.AbstractWHAM-class.html#_abc_registry
csb.test.AbstractTestBuilder	csb.test.AbstractTestBuilder-class.html
csb.test.AbstractTestBuilder.loadTests	csb.test.AbstractTestBuilder-class.html#loadTests
csb.test.AbstractTestBuilder.__metaclass__	abc.ABCMeta-class.html
csb.test.AbstractTestBuilder._abc_negative_cache	csb.test.AbstractTestBuilder-class.html#_abc_negative_cache
csb.test.AbstractTestBuilder.loadFromFile	csb.test.AbstractTestBuilder-class.html#loadFromFile
csb.test.AbstractTestBuilder.labels	csb.test.AbstractTestBuilder-class.html#labels
csb.test.AbstractTestBuilder._recurse	csb.test.AbstractTestBuilder-class.html#_recurse
csb.test.AbstractTestBuilder._abc_cache	csb.test.AbstractTestBuilder-class.html#_abc_cache
csb.test.AbstractTestBuilder.__abstractmethods__	csb.test.AbstractTestBuilder-class.html#__abstractmethods__
csb.test.AbstractTestBuilder._filter	csb.test.AbstractTestBuilder-class.html#_filter
csb.test.AbstractTestBuilder.loadMultipleTests	csb.test.AbstractTestBuilder-class.html#loadMultipleTests
csb.test.AbstractTestBuilder.loadAllTests	csb.test.AbstractTestBuilder-class.html#loadAllTests
csb.test.AbstractTestBuilder._loadSource	csb.test.AbstractTestBuilder-class.html#_loadSource
csb.test.AbstractTestBuilder._abc_negative_cache_version	csb.test.AbstractTestBuilder-class.html#_abc_negative_cache_version
csb.test.AbstractTestBuilder._abc_registry	csb.test.AbstractTestBuilder-class.html#_abc_registry
csb.test.AnyTestBuilder	csb.test.AnyTestBuilder-class.html
csb.test.AbstractTestBuilder.loadTests	csb.test.AbstractTestBuilder-class.html#loadTests
csb.test.AbstractTestBuilder.__metaclass__	abc.ABCMeta-class.html
csb.test.AbstractTestBuilder._abc_negative_cache	csb.test.AbstractTestBuilder-class.html#_abc_negative_cache
csb.test.AbstractTestBuilder.loadFromFile	csb.test.AbstractTestBuilder-class.html#loadFromFile
csb.test.AnyTestBuilder.labels	csb.test.AnyTestBuilder-class.html#labels
csb.test.AbstractTestBuilder._recurse	csb.test.AbstractTestBuilder-class.html#_recurse
csb.test.AbstractTestBuilder._abc_cache	csb.test.AbstractTestBuilder-class.html#_abc_cache
csb.test.AnyTestBuilder.__abstractmethods__	csb.test.AnyTestBuilder-class.html#__abstractmethods__
csb.test.AbstractTestBuilder._filter	csb.test.AbstractTestBuilder-class.html#_filter
csb.test.AbstractTestBuilder.loadMultipleTests	csb.test.AbstractTestBuilder-class.html#loadMultipleTests
csb.test.AbstractTestBuilder.loadAllTests	csb.test.AbstractTestBuilder-class.html#loadAllTests
csb.test.AbstractTestBuilder._loadSource	csb.test.AbstractTestBuilder-class.html#_loadSource
csb.test.AbstractTestBuilder._abc_negative_cache_version	csb.test.AbstractTestBuilder-class.html#_abc_negative_cache_version
csb.test.AbstractTestBuilder._abc_registry	csb.test.AbstractTestBuilder-class.html#_abc_registry
csb.test.Attributes	csb.test.Attributes-class.html
csb.test.Attributes.FUNCTIONAL	csb.test.Attributes-class.html#FUNCTIONAL
csb.test.Attributes.CUSTOM	csb.test.Attributes-class.html#CUSTOM
csb.test.Attributes.REGRESSION	csb.test.Attributes-class.html#REGRESSION
csb.test.Attributes.UNIT	csb.test.Attributes-class.html#UNIT
csb.test.Case	csb.test.Case-class.html
csb.test.Case.execute	csb.test.Case-class.html#execute
csb.test.Case.assertAlmostEqual	csb.test.Case-class.html#assertAlmostEqual
csb.test.Case.setUp	csb.test.Case-class.html#setUp
csb.test.Case.reRaise	csb.test.Case-class.html#reRaise
csb.test.Case.assertFasterThan	csb.test.Case-class.html#assertFasterThan
unittest.case.TestCase.failureException	exceptions.AssertionError-class.html
csb.test.Case.config	csb.test.Case-class.html#config
csb.test.Config	csb.test.Config-class.html
csb.test.Config.generated_data	csb.test.Config-class.html#generated_data
csb.test.Config.getTestFile	csb.test.Config-class.html#getTestFile
csb.test.Config.ensureDataConsistency	csb.test.Config-class.html#ensureDataConsistency
csb.test.Config.DATA	csb.test.Config-class.html#DATA
csb.test.Config.TEMP	csb.test.Config-class.html#TEMP
csb.test.Config.getContent	csb.test.Config-class.html#getContent
csb.test.Config.updateDataFiles	csb.test.Config-class.html#updateDataFiles
csb.test.Config.getPickle	csb.test.Config-class.html#getPickle
csb.test.Config.data	csb.test.Config-class.html#data
csb.test.Config.temp	csb.test.Config-class.html#temp
csb.test.Config.getTempStream	csb.test.Config-class.html#getTempStream
csb.test.Config.setDefaultDataRoot	csb.test.Config-class.html#setDefaultDataRoot
csb.test.Config.GENERATED_DATA	csb.test.Config-class.html#GENERATED_DATA
csb.test.Config.setDefaultGeneratedDataRoot	csb.test.Config-class.html#setDefaultGeneratedDataRoot
csb.test.Console	csb.test.Console-class.html
csb.test.Console.generated_data	csb.test.Console-class.html#generated_data
csb.test.Console.__init__	csb.test.Console-class.html#__init__
csb.test.Console.parseArguments	csb.test.Console-class.html#parseArguments
csb.test.Console.namespace	csb.test.Console-class.html#namespace
csb.test.Console.program	csb.test.Console-class.html#program
csb.test.Console.BUILDERS	csb.test.Console-class.html#BUILDERS
csb.test.Console.run	csb.test.Console-class.html#run
csb.test.Console.update	csb.test.Console-class.html#update
csb.test.Console.builder	csb.test.Console-class.html#builder
csb.test.Console.builders	csb.test.Console-class.html#builders
csb.test.Console.verbosity	csb.test.Console-class.html#verbosity
csb.test.CustomTestBuilder	csb.test.CustomTestBuilder-class.html
csb.test.CustomTestBuilder.loadTests	csb.test.CustomTestBuilder-class.html#loadTests
csb.test.AbstractTestBuilder.__metaclass__	abc.ABCMeta-class.html
csb.test.AbstractTestBuilder._abc_negative_cache	csb.test.AbstractTestBuilder-class.html#_abc_negative_cache
csb.test.CustomTestBuilder.loadFromFile	csb.test.CustomTestBuilder-class.html#loadFromFile
csb.test.CustomTestBuilder.labels	csb.test.CustomTestBuilder-class.html#labels
csb.test.AbstractTestBuilder._recurse	csb.test.AbstractTestBuilder-class.html#_recurse
csb.test.AbstractTestBuilder._abc_cache	csb.test.AbstractTestBuilder-class.html#_abc_cache
csb.test.CustomTestBuilder.__abstractmethods__	csb.test.CustomTestBuilder-class.html#__abstractmethods__
csb.test.CustomTestBuilder._filter	csb.test.CustomTestBuilder-class.html#_filter
csb.test.AbstractTestBuilder.loadMultipleTests	csb.test.AbstractTestBuilder-class.html#loadMultipleTests
csb.test.AbstractTestBuilder.loadAllTests	csb.test.AbstractTestBuilder-class.html#loadAllTests
csb.test.CustomTestBuilder._inspect	csb.test.CustomTestBuilder-class.html#_inspect
csb.test.AbstractTestBuilder._loadSource	csb.test.AbstractTestBuilder-class.html#_loadSource
csb.test.AbstractTestBuilder._abc_negative_cache_version	csb.test.AbstractTestBuilder-class.html#_abc_negative_cache_version
csb.test.AbstractTestBuilder._abc_registry	csb.test.AbstractTestBuilder-class.html#_abc_registry
csb.test.FunctionalTestBuilder	csb.test.FunctionalTestBuilder-class.html
csb.test.AbstractTestBuilder.loadTests	csb.test.AbstractTestBuilder-class.html#loadTests
csb.test.AbstractTestBuilder.__metaclass__	abc.ABCMeta-class.html
csb.test.AbstractTestBuilder._abc_negative_cache	csb.test.AbstractTestBuilder-class.html#_abc_negative_cache
csb.test.AbstractTestBuilder.loadFromFile	csb.test.AbstractTestBuilder-class.html#loadFromFile
csb.test.FunctionalTestBuilder.labels	csb.test.FunctionalTestBuilder-class.html#labels
csb.test.AbstractTestBuilder._recurse	csb.test.AbstractTestBuilder-class.html#_recurse
csb.test.AbstractTestBuilder._abc_cache	csb.test.AbstractTestBuilder-class.html#_abc_cache
csb.test.FunctionalTestBuilder.__abstractmethods__	csb.test.FunctionalTestBuilder-class.html#__abstractmethods__
csb.test.AbstractTestBuilder._filter	csb.test.AbstractTestBuilder-class.html#_filter
csb.test.AbstractTestBuilder.loadMultipleTests	csb.test.AbstractTestBuilder-class.html#loadMultipleTests
csb.test.AbstractTestBuilder.loadAllTests	csb.test.AbstractTestBuilder-class.html#loadAllTests
csb.test.AbstractTestBuilder._loadSource	csb.test.AbstractTestBuilder-class.html#_loadSource
csb.test.AbstractTestBuilder._abc_negative_cache_version	csb.test.AbstractTestBuilder-class.html#_abc_negative_cache_version
csb.test.AbstractTestBuilder._abc_registry	csb.test.AbstractTestBuilder-class.html#_abc_registry
csb.test.InvalidNamespaceError	csb.test.InvalidNamespaceError-class.html
csb.test.RegressionTestBuilder	csb.test.RegressionTestBuilder-class.html
csb.test.AbstractTestBuilder.loadTests	csb.test.AbstractTestBuilder-class.html#loadTests
csb.test.AbstractTestBuilder.__metaclass__	abc.ABCMeta-class.html
csb.test.AbstractTestBuilder._abc_negative_cache	csb.test.AbstractTestBuilder-class.html#_abc_negative_cache
csb.test.AbstractTestBuilder.loadFromFile	csb.test.AbstractTestBuilder-class.html#loadFromFile
csb.test.RegressionTestBuilder.labels	csb.test.RegressionTestBuilder-class.html#labels
csb.test.AbstractTestBuilder._recurse	csb.test.AbstractTestBuilder-class.html#_recurse
csb.test.AbstractTestBuilder._abc_cache	csb.test.AbstractTestBuilder-class.html#_abc_cache
csb.test.RegressionTestBuilder.__abstractmethods__	csb.test.RegressionTestBuilder-class.html#__abstractmethods__
csb.test.AbstractTestBuilder._filter	csb.test.AbstractTestBuilder-class.html#_filter
csb.test.AbstractTestBuilder.loadMultipleTests	csb.test.AbstractTestBuilder-class.html#loadMultipleTests
csb.test.AbstractTestBuilder.loadAllTests	csb.test.AbstractTestBuilder-class.html#loadAllTests
csb.test.AbstractTestBuilder._loadSource	csb.test.AbstractTestBuilder-class.html#_loadSource
csb.test.AbstractTestBuilder._abc_negative_cache_version	csb.test.AbstractTestBuilder-class.html#_abc_negative_cache_version
csb.test.AbstractTestBuilder._abc_registry	csb.test.AbstractTestBuilder-class.html#_abc_registry
csb.test.UnitTestBuilder	csb.test.UnitTestBuilder-class.html
csb.test.AbstractTestBuilder.loadTests	csb.test.AbstractTestBuilder-class.html#loadTests
csb.test.AbstractTestBuilder.__metaclass__	abc.ABCMeta-class.html
csb.test.AbstractTestBuilder._abc_negative_cache	csb.test.AbstractTestBuilder-class.html#_abc_negative_cache
csb.test.AbstractTestBuilder.loadFromFile	csb.test.AbstractTestBuilder-class.html#loadFromFile
csb.test.UnitTestBuilder.labels	csb.test.UnitTestBuilder-class.html#labels
csb.test.AbstractTestBuilder._recurse	csb.test.AbstractTestBuilder-class.html#_recurse
csb.test.AbstractTestBuilder._abc_cache	csb.test.AbstractTestBuilder-class.html#_abc_cache
csb.test.UnitTestBuilder.__abstractmethods__	csb.test.UnitTestBuilder-class.html#__abstractmethods__
csb.test.AbstractTestBuilder._filter	csb.test.AbstractTestBuilder-class.html#_filter
csb.test.AbstractTestBuilder.loadMultipleTests	csb.test.AbstractTestBuilder-class.html#loadMultipleTests
csb.test.AbstractTestBuilder.loadAllTests	csb.test.AbstractTestBuilder-class.html#loadAllTests
csb.test.AbstractTestBuilder._loadSource	csb.test.AbstractTestBuilder-class.html#_loadSource
csb.test.AbstractTestBuilder._abc_negative_cache_version	csb.test.AbstractTestBuilder-class.html#_abc_negative_cache_version
csb.test.AbstractTestBuilder._abc_registry	csb.test.AbstractTestBuilder-class.html#_abc_registry
exceptions.AssertionError	exceptions.AssertionError-class.html
exceptions.AssertionError.__init__	exceptions.AssertionError-class.html#__init__
exceptions.AssertionError.__new__	exceptions.AssertionError-class.html#__new__
