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LICENSE
MANIFEST.in
README.rst
THANKS.txt
VERSION
ez_setup.py
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ete2/__init__.py
ete2/_argparse.py
ete2/_ph.py
ete2/utils.py
ete2/version.py
ete2.egg-info/PKG-INFO
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ete2/clustering/clustertree.py
ete2/clustering/clustvalidation.py
ete2/clustering/pstat.py
ete2/clustering/stats.py
ete2/coretype/__init__.py
ete2/coretype/arraytable.py
ete2/coretype/seqgroup.py
ete2/coretype/tree.py
ete2/evol/__init__.py
ete2/evol/control.py
ete2/evol/evoltree.py
ete2/evol/model.py
ete2/evol/utils.py
ete2/evol/parser/__init__.py
ete2/evol/parser/codemlparser.py
ete2/evol/parser/slrparser.py
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ete2/tools/phylobuild_lib/scheduler.py
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ete2/webplugin/__init__.py
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examples/general/add_features.py
examples/general/byoperand_search.py
examples/general/chimp.png
examples/general/copy_and_paste_trees.py
examples/general/create_trees_from_scratch.py
examples/general/custom_search.py
examples/general/custom_tree_traversing.py
examples/general/custom_tree_visualization.py
examples/general/dog.png
examples/general/fish.png
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examples/general/genes_tree.nh
examples/general/get_common_ancestor.py
examples/general/get_distances_between_nodes.py
examples/general/get_midpoint_outgroup.py
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examples/general/human.png
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examples/general/label_nodes.py
examples/general/mouse.png
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examples/general/read_newick.py
examples/general/remove_and_delete_nodes.py
examples/general/render_tree_images.py
examples/general/rooting_subtrees.py
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examples/nexml/02_dogfish_no_taxrefs.xml
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examples/nexml/meta_taxa.xml
examples/nexml/nexml.xml
examples/nexml/nexml_annotated_trees.py
examples/nexml/nexml_from_scratch.py
examples/nexml/nexml_parser.py
examples/nexml/phenoscape.xml
examples/nexml/taxa.xml
examples/nexml/timetree.xml
examples/nexml/tolweb.xml
examples/nexml/trees.xml
examples/phylogenies/dating_evolutionary_events.py
examples/phylogenies/link_sequences_to_phylogenies.py
examples/phylogenies/orthology_and_paralogy_prediction.py
examples/phylogenies/phylotree.png
examples/phylogenies/phylotree_visualization.py
examples/phylogenies/species_aware_phylogenies.py
examples/phylogenies/tree_reconciliation.py
examples/phyloxml/apaf.xml
examples/phyloxml/bcl_2.xml
examples/phyloxml/example1.xml
examples/phyloxml/example2.xml
examples/phyloxml/example3.xml
examples/phyloxml/multiple_supports.xml
examples/phyloxml/ncbi_taxonomy_metazoa.xml.bz2
examples/phyloxml/phyloxml_examples.xml
examples/phyloxml/phyloxml_from_scratch.py
examples/phyloxml/phyloxml_parser.py
examples/phyloxml/tol_life_on_earth.xml.bz2
examples/treeview/barchart_and_piechart_faces.py
examples/treeview/barcharts.png
examples/treeview/bubble_map.png
examples/treeview/bubble_map.py
examples/treeview/face_grid.py
examples/treeview/face_positions.py
examples/treeview/face_rotation.py
examples/treeview/float_piechart.png
examples/treeview/floating_piecharts.py
examples/treeview/item_faces.png
examples/treeview/item_faces.py
examples/treeview/new_seq_face.py
examples/treeview/node_background.png
examples/treeview/node_background.py
examples/treeview/node_style.png
examples/treeview/node_style.py
examples/treeview/random_draw.py
examples/treeview/rotated_faces.png
examples/treeview/seq_motif_faces.png
examples/treeview/seq_motif_faces.py
examples/treeview/seqmotif.png
examples/treeview/tree_faces.png
examples/treeview/tree_faces.py
examples/treeview/img_faces/chimp.png
examples/treeview/img_faces/dog.png
examples/treeview/img_faces/fish.png
examples/treeview/img_faces/fly.png
examples/treeview/img_faces/human.png
examples/treeview/img_faces/img_faces.png
examples/treeview/img_faces/img_faces.py
examples/treeview/img_faces/mouse.png
examples/webplugin/README
examples/webplugin/close.png
examples/webplugin/ete.css
examples/webplugin/ete.js
examples/webplugin/icon_attachment.png
examples/webplugin/icon_cancel_search.png
examples/webplugin/icon_search.png
examples/webplugin/icon_tools.png
examples/webplugin/jquery-1.4.2.min.js
examples/webplugin/jquery-ui-1.8.4.custom.min.js
examples/webplugin/loader.gif
examples/webplugin/webplugin_example.html
examples/webplugin/wsgi/webplugin_example.py
test/datasets.py
test/test_all.py
test/test_arraytable.py
test/test_circ_scale.py
test/test_clustertree.py
test/test_evol.py
test/test_ncbiquery.py
test/test_phylomedb3connector.py
test/test_phylotree.py
test/test_r_bindings.py
test/test_scale.py
test/test_seqgroup.py
test/test_tree.py
test/test_treeview.py
test/test_xml_parsers.py
test/tools/ENOG411675T.fa
test/tools/alignment.fa
test/tools/annotations.txt
test/tools/species.txt
test/tools/supports.txt
test/tools/test.sh