Metadata-Version: 2.1
Name: wc-sandbox
Version: 0.0.1
Summary: Jupyter playground for whole-cell modeling
Home-page: https://github.com/KarrLab/wc_sandbox
Author: Karr Lab
Author-email: karr@mssm.com
License: MIT
Download-URL: https://github.com/KarrLab/wc_sandbox
Keywords: whole-cell modeling,computational biology,systems biology,modeling,simulation,jupyter
Platform: UNKNOWN
Classifier: Development Status :: 3 - Alpha
Classifier: License :: OSI Approved :: MIT License
Classifier: Programming Language :: Python
Classifier: Programming Language :: Python :: 3
Classifier: Natural Language :: English
Classifier: Operating System :: OS Independent
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Provides-Extra: all
Provides-Extra: docs
Provides-Extra: tests
Requires-Dist: bpforms
Requires-Dist: cement
Requires-Dist: jupyter
Requires-Dist: jupyter-contrib-nbextensions
Requires-Dist: setuptools
Requires-Dist: wc-rules
Provides-Extra: all
Requires-Dist: capturer; extra == 'all'
Requires-Dist: mock; extra == 'all'
Requires-Dist: sphinx (>=1.8); extra == 'all'
Requires-Dist: sphinx-rtd-theme; extra == 'all'
Requires-Dist: sphinxcontrib-addmetahtml (>=0.1.1); extra == 'all'
Requires-Dist: sphinxcontrib-bibtex; extra == 'all'
Requires-Dist: sphinxcontrib-googleanalytics (>=0.1.1); extra == 'all'
Requires-Dist: sphinxcontrib-spelling; extra == 'all'
Provides-Extra: docs
Requires-Dist: sphinx (>=1.8); extra == 'docs'
Requires-Dist: sphinx-rtd-theme; extra == 'docs'
Requires-Dist: sphinxcontrib-addmetahtml (>=0.1.1); extra == 'docs'
Requires-Dist: sphinxcontrib-bibtex; extra == 'docs'
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Requires-Dist: sphinxcontrib-spelling; extra == 'docs'
Provides-Extra: tests
Requires-Dist: capturer; extra == 'tests'
Requires-Dist: mock; extra == 'tests'

|PyPI package| |Documentation| |Test results| |Test coverage| |Code
analysis| |License| |Analytics|

WC-Sandbox: Jupyter playground for whole-cell modeling
======================================================

WC-Sandbox is a collection of Jupyter notebooks for learning about
whole-cell modeling. The sandbox is available at
https://sandbox.karrlab.org.

Installation
------------

1. Install dependencies

   -  `Pip <https://pip.pypa.io>`__ >= 18.0
   -  `Python <https://www.python.org>`__ >= 3.6
   -  Requirements for individual WC modeling tools. See `An
      Introduction to Whole-Cell
      Modeling <http://docs.karrlab.org/intro_to_wc_modeling/master/0.0.1/installation.html>`__.

2. Install this package

   -  Install the latest release from PyPI ``pip install wc_sandbox``

   -  Install the latest revision from GitHub
      ``pip install git+git://github.com/KarrLab/wc_sandbox#egg=wc_sandbox``

Examples, tutorial, and documentation
-------------------------------------

Please see the `documentation <https://docs.karrlab.org/wc_sandbox>`__.

License
-------

The package is released under the `MIT license <LICENSE>`__.

Development team
----------------

This package was developed by the `Karr Lab <https://www.karrlab.org>`__
at the Icahn School of Medicine at Mount Sinai in New York, USA.

Questions and comments
----------------------

Please contact the `Karr Lab <https://www.karrlab.org>`__ with any
questions or comments.

.. |PyPI package| image:: https://img.shields.io/pypi/v/wc_sandbox.svg
   :target: https://pypi.python.org/pypi/wc_sandbox
.. |Documentation| image:: https://readthedocs.org/projects/wc_sandbox/badge/?version=latest
   :target: https://docs.karrlab.org/wc_sandbox
.. |Test results| image:: https://circleci.com/gh/KarrLab/wc_sandbox.svg?style=shield
   :target: https://circleci.com/gh/KarrLab/wc_sandbox
.. |Test coverage| image:: https://coveralls.io/repos/github/KarrLab/wc_sandbox/badge.svg
   :target: https://coveralls.io/github/KarrLab/wc_sandbox
.. |Code analysis| image:: https://api.codeclimate.com/v1/badges/c8e5e44b6d9b957ef0ec/maintainability
   :target: https://codeclimate.com/github/KarrLab/wc_sandbox
.. |License| image:: https://img.shields.io/github/license/KarrLab/wc_sandbox.svg
   :target: LICENSE
.. |Analytics| image:: https://ga-beacon.appspot.com/UA-86759801-1/wc_sandbox/README.md?pixel



