.gitattributes
.gitignore
.pre-commit-config.yaml
.python-version
AGENTS.md
LICENSE
README.md
makefile
pyproject.toml
uv.lock
.github/workflows/docs.yaml
.github/workflows/pypi_push.yaml
.github/workflows/pytest.yaml
docs/Makefile
docs/figures/hyperiax_logo.png
docs/figures/hyperiax_logo_small.png
docs/source/conf.py
docs/source/index.rst
docs/source/_static/.gitkeep
docs/source/api/index.rst
docs/source/notebooks/01_quickstart.ipynb
docs/source/notebooks/02_writing_sweeps.ipynb
docs/source/notebooks/03_phylo_mean.ipynb
docs/source/notebooks/04_phylo_bayesian.ipynb
docs/source/notebooks/05_gaussian_bffg.ipynb
docs/source/notebooks/06_gaussian_nuts.ipynb
docs/source/notebooks/07_kunita_shape.ipynb
docs/source/notebooks/index.rst
hyperiax/__init__.py
hyperiax/_version.py
hyperiax.egg-info/PKG-INFO
hyperiax.egg-info/SOURCES.txt
hyperiax.egg-info/dependency_links.txt
hyperiax.egg-info/requires.txt
hyperiax.egg-info/top_level.txt
hyperiax/core/__init__.py
hyperiax/core/builders.py
hyperiax/core/dispatch.py
hyperiax/core/errors.py
hyperiax/core/schema.py
hyperiax/core/sweep.py
hyperiax/core/topology.py
hyperiax/core/tree.py
hyperiax/core/views.py
hyperiax/prebuilt/__init__.py
hyperiax/prebuilt/bffg.py
hyperiax/prebuilt/phylo_mean.py
hyperiax/utils/__init__.py
hyperiax/utils/ode.py
hyperiax/utils/sde.py
tests/__init__.py
tests/test_builders.py
tests/test_core_dependencies.py
tests/test_newick.py
tests/test_prebuilt_bffg_precision.py
tests/test_prebuilt_phylo_mean.py
tests/test_regression.py
tests/test_schema.py
tests/test_sweep_down.py
tests/test_sweep_up.py
tests/test_topology.py
tests/test_tree.py
tests/test_utils_ode.py
tests/test_utils_sde.py