LICENSE
README.md
pyproject.toml
scienceflow/__init__.py
scienceflow/cli.py
scienceflow.egg-info/PKG-INFO
scienceflow.egg-info/SOURCES.txt
scienceflow.egg-info/dependency_links.txt
scienceflow.egg-info/entry_points.txt
scienceflow.egg-info/requires.txt
scienceflow.egg-info/top_level.txt
scienceflow/agent/__init__.py
scienceflow/agent/core/__init__.py
scienceflow/agent/core/ports/__init__.py
scienceflow/agent/core/ports/callback_ports.py
scienceflow/agent/core/ports/host_ports.py
scienceflow/agent/core/ports/session_callbacks.py
scienceflow/agent/core/runtime/__init__.py
scienceflow/agent/core/runtime/agent.py
scienceflow/agent/core/runtime/ephemeral.py
scienceflow/agent/core/runtime/registry.py
scienceflow/agent/core/runtime/run_policy.py
scienceflow/agent/factory/__init__.py
scienceflow/agent/factory/composition.py
scienceflow/agent/factory/contracts.py
scienceflow/agent/factory/service.py
scienceflow/agent/factory/construction/__init__.py
scienceflow/agent/factory/construction/assembly.py
scienceflow/agent/factory/construction/builder.py
scienceflow/agent/policies/__init__.py
scienceflow/agent/policies/repl.py
scienceflow/agent/policies/routing.py
scienceflow/agent/prompts/README.md
scienceflow/agent/prompts/__init__.py
scienceflow/agent/prompts/system_prompt.py
scienceflow/agent/prompts/write_coaching.py
scienceflow/agent/prompts/L0/README.md
scienceflow/agent/prompts/L0/code_agent_core.md
scienceflow/agent/prompts/L0/code_agent_core_bash_write.md
scienceflow/agent/prompts/L0/default_system.md
scienceflow/agent/prompts/L0/default_system_bash_write.md
scienceflow/agent/prompts/L0/tool_policy_parallel.md
scienceflow/agent/prompts/L0/tool_policy_parallel_bash_write.md
scienceflow/agent/prompts/L0/tool_policy_single.md
scienceflow/agent/prompts/L0/tool_policy_single_bash_write.md
scienceflow/agent/session/__init__.py
scienceflow/agent/session/coordination/__init__.py
scienceflow/agent/session/coordination/context.py
scienceflow/agent/session/coordination/contracts.py
scienceflow/agent/session/coordination/host.py
scienceflow/agent/session/execution/__init__.py
scienceflow/agent/session/execution/runtime.py
scienceflow/agent/session/execution/tool_result.py
scienceflow/agent/session/execution/turn.py
scienceflow/foundation/__init__.py
scienceflow/foundation/architecture/__init__.py
scienceflow/foundation/architecture/dependencies.py
scienceflow/foundation/config/__init__.py
scienceflow/foundation/config/default.yaml
scienceflow/foundation/config/sci_modeling_bench.yaml
scienceflow/foundation/config/llm/__init__.py
scienceflow/foundation/config/llm/llm_factory.py
scienceflow/foundation/config/llm/llm_http.py
scienceflow/foundation/config/llm/llm_pool.py
scienceflow/foundation/config/llm/model_registry.py
scienceflow/foundation/config/profiles/__init__.py
scienceflow/foundation/config/profiles/defaults/agent.yaml
scienceflow/foundation/config/profiles/defaults/evaluator.yaml
scienceflow/foundation/config/profiles/defaults/exec.yaml
scienceflow/foundation/config/profiles/defaults/repl.yaml
scienceflow/foundation/config/profiles/defaults/tool.yaml
scienceflow/foundation/config/profiles/defaults/workspace.yaml
scienceflow/foundation/config/profiles/defaults/lnr/context.yaml
scienceflow/foundation/config/profiles/defaults/lnr/estra-magent.yaml
scienceflow/foundation/config/profiles/defaults/lnr/estra.yaml
scienceflow/foundation/config/profiles/defaults/lnr/index.yaml
scienceflow/foundation/config/profiles/defaults/lnr/resource-arbiter.yaml
scienceflow/foundation/config/profiles/defaults/lnr/resource-gpu.yaml
scienceflow/foundation/config/profiles/defaults/lnr/resource-guards.yaml
scienceflow/foundation/config/profiles/defaults/lnr/resource-monitor.yaml
scienceflow/foundation/config/profiles/defaults/lnr/runtime.yaml
scienceflow/foundation/config/profiles/defaults/lnr/selection.yaml
scienceflow/foundation/config/profiles/defaults/lnr/skills.yaml
scienceflow/foundation/config/profiles/defaults/lnr/snapshots.yaml
scienceflow/foundation/config/profiles/defaults/lnr/stage.yaml
scienceflow/foundation/config/profiles/defaults/lnr/workspace.yaml
scienceflow/foundation/config/runtime/__init__.py
scienceflow/foundation/config/runtime/agent_constants.py
scienceflow/foundation/config/runtime/environment.py
scienceflow/foundation/config/runtime/llm_lists.py
scienceflow/foundation/config/runtime/resource_modes.py
scienceflow/foundation/config/schema/__init__.py
scienceflow/foundation/config/schema/settings.py
scienceflow/foundation/config/schema/models/__init__.py
scienceflow/foundation/config/schema/models/contracts/__init__.py
scienceflow/foundation/config/schema/models/contracts/base.py
scienceflow/foundation/config/schema/models/contracts/environment.py
scienceflow/foundation/config/schema/models/contracts/profiles.py
scienceflow/foundation/config/schema/models/contracts/schema.py
scienceflow/foundation/config/schema/models/loading/__init__.py
scienceflow/foundation/config/schema/models/loading/loader.py
scienceflow/foundation/config/schema/models/loading/parallel_overrides.py
scienceflow/foundation/config/schema/models/loading/serialization.py
scienceflow/foundation/contracts/__init__.py
scienceflow/foundation/contracts/research/__init__.py
scienceflow/foundation/contracts/research/estra.py
scienceflow/foundation/contracts/research/evaluation.py
scienceflow/foundation/contracts/research/gate.py
scienceflow/foundation/contracts/research/metric.py
scienceflow/foundation/contracts/runtime/__init__.py
scienceflow/foundation/contracts/runtime/base.py
scienceflow/foundation/contracts/runtime/resource_execution.py
scienceflow/foundation/contracts/runtime/workspace_memory.py
scienceflow/interfaces/__init__.py
scienceflow/interfaces/cli/__init__.py
scienceflow/interfaces/cli/__main__.py
scienceflow/interfaces/cli/tui_sessions.py
scienceflow/interfaces/cli/user_config.py
scienceflow/interfaces/cli/commands/__init__.py
scienceflow/interfaces/cli/commands/inspect/__init__.py
scienceflow/interfaces/cli/commands/inspect/monitor.py
scienceflow/interfaces/cli/commands/inspect/replay.py
scienceflow/interfaces/cli/commands/inspect/resources.py
scienceflow/interfaces/cli/commands/inspect/web.py
scienceflow/interfaces/cli/commands/run/__init__.py
scienceflow/interfaces/cli/commands/run/parallel.py
scienceflow/interfaces/cli/commands/run/repl.py
scienceflow/interfaces/cli/commands/run/task.py
scienceflow/interfaces/cli/commands/run/tui.py
scienceflow/interfaces/cli/commands/run/control/__init__.py
scienceflow/interfaces/cli/commands/run/control/commands.py
scienceflow/interfaces/cli/commands/run/control/guided.py
scienceflow/interfaces/ui/__init__.py
scienceflow/interfaces/ui/console.py
scienceflow/interfaces/ui/llm_cli.py
scienceflow/interfaces/ui/logo.py
scienceflow/interfaces/ui/long_research.py
scienceflow/interfaces/ui/long_research_progress.py
scienceflow/interfaces/ui/model_config.py
scienceflow/interfaces/ui/assets/logo_scienceflow.png
scienceflow/interfaces/ui/assets/logo_scienceflow_lite.ico
scienceflow/interfaces/ui/assets/tui_badge.svg
scienceflow/interfaces/ui/assets/tui_tiny.svg
scienceflow/interfaces/ui/monitor/__init__.py
scienceflow/interfaces/ui/monitor/dashboard.py
scienceflow/interfaces/ui/monitor/helpers.py
scienceflow/interfaces/ui/monitor/lnr_state.py
scienceflow/interfaces/ui/monitor/lnr/__init__.py
scienceflow/interfaces/ui/monitor/lnr/projection/__init__.py
scienceflow/interfaces/ui/monitor/lnr/projection/aggregation.py
scienceflow/interfaces/ui/monitor/lnr/projection/events.py
scienceflow/interfaces/ui/monitor/lnr/projection/state.py
scienceflow/interfaces/ui/monitor/lnr/projection/summary.py
scienceflow/interfaces/ui/monitor/lnr/rendering/__init__.py
scienceflow/interfaces/ui/monitor/lnr/rendering/base.py
scienceflow/interfaces/ui/monitor/lnr/rendering/formatting.py
scienceflow/interfaces/ui/monitor/lnr/rendering/reader.py
scienceflow/interfaces/ui/monitor/lnr/rendering/status.py
scienceflow/interfaces/ui/monitor/lnr/rendering/time_trace.py
scienceflow/interfaces/ui/monitor_trace/__init__.py
scienceflow/interfaces/ui/monitor_trace/presentation/__init__.py
scienceflow/interfaces/ui/monitor_trace/presentation/builder.py
scienceflow/interfaces/ui/monitor_trace/presentation/render.py
scienceflow/interfaces/ui/monitor_trace/presentation/runner.py
scienceflow/interfaces/ui/monitor_trace/view_model/__init__.py
scienceflow/interfaces/ui/monitor_trace/view_model/assets.py
scienceflow/interfaces/ui/monitor_trace/view_model/leaderboard.py
scienceflow/interfaces/ui/monitor_trace/view_model/models.py
scienceflow/interfaces/ui/research/__init__.py
scienceflow/interfaces/ui/research/long_research_progress.py
scienceflow/interfaces/ui/research/research_events.py
scienceflow/interfaces/ui/research/research_preparation.py
scienceflow/interfaces/ui/research/research_usage.py
scienceflow/interfaces/ui/research/resources.py
scienceflow/interfaces/ui/research/control/__init__.py
scienceflow/interfaces/ui/research/control/attachment.py
scienceflow/interfaces/ui/research/control/notices.py
scienceflow/interfaces/ui/research/control/tasks/__init__.py
scienceflow/interfaces/ui/research/control/tasks/completion.py
scienceflow/interfaces/ui/research/control/tasks/manager.py
scienceflow/interfaces/ui/research/control/tasks/metrics.py
scienceflow/interfaces/ui/research/control/tasks/projection.py
scienceflow/interfaces/ui/research/control/tasks/records.py
scienceflow/interfaces/ui/research/telemetry/__init__.py
scienceflow/interfaces/ui/research/telemetry/formatting.py
scienceflow/interfaces/ui/research/telemetry/sampler.py
scienceflow/interfaces/ui/web_monitor/__init__.py
scienceflow/interfaces/ui/web_monitor/data.py
scienceflow/interfaces/ui/web_monitor/page.py
scienceflow/interfaces/ui/web_monitor/projection.py
scienceflow/interfaces/ui/web_monitor/server.py
scienceflow/interfaces/ui/web_monitor/service.py
scienceflow/interfaces/ui/web_monitor/assets/core.js
scienceflow/interfaces/ui/web_monitor/assets/lineage.js
scienceflow/interfaces/ui/web_monitor/assets/lineage_layout.js
scienceflow/interfaces/ui/web_monitor/assets/lineage_viewport.js
scienceflow/interfaces/ui/web_monitor/assets/metric.js
scienceflow/interfaces/ui/web_monitor/assets/refresh.js
scienceflow/interfaces/ui/web_monitor/assets/shell.html
scienceflow/interfaces/ui/web_monitor/assets/theme.css
scienceflow/interfaces/ui/web_monitor/assets/view.js
scienceflow/research/__init__.py
scienceflow/research/control/__init__.py
scienceflow/research/control/agent_runtime_state.py
scienceflow/research/control/agent_session_setup.py
scienceflow/research/control/agent_session_state.py
scienceflow/research/control/ephemeral_agent_session.py
scienceflow/research/control/admission/__init__.py
scienceflow/research/control/admission/contracts.py
scienceflow/research/control/admission/observation.py
scienceflow/research/control/admission/policy.py
scienceflow/research/control/admission/replay.py
scienceflow/research/control/admission/service.py
scienceflow/research/control/estra/__init__.py
scienceflow/research/control/estra/planning/__init__.py
scienceflow/research/control/estra/planning/contracts.py
scienceflow/research/control/estra/planning/parser.py
scienceflow/research/control/estra/planning/planner.py
scienceflow/research/control/estra/planning/policy.py
scienceflow/research/control/estra/runtime/__init__.py
scienceflow/research/control/estra/runtime/archive.py
scienceflow/research/control/estra/runtime/commands.py
scienceflow/research/control/estra/runtime/service.py
scienceflow/research/control/execution_value/__init__.py
scienceflow/research/control/execution_value/adapters/__init__.py
scienceflow/research/control/execution_value/adapters/lnr_observer.py
scienceflow/research/control/execution_value/decision/__init__.py
scienceflow/research/control/execution_value/decision/contracts.py
scienceflow/research/control/execution_value/decision/observation.py
scienceflow/research/control/execution_value/decision/router.py
scienceflow/research/control/execution_value/decision/service.py
scienceflow/research/control/execution_value/evidence/__init__.py
scienceflow/research/control/execution_value/evidence/cost_tracker.py
scienceflow/research/control/execution_value/evidence/quick_test.py
scienceflow/research/control/execution_value/evidence/replay.py
scienceflow/research/control/resources/__init__.py
scienceflow/research/control/resources/adapters/__init__.py
scienceflow/research/control/resources/adapters/lnr_runtime.py
scienceflow/research/control/resources/policy/__init__.py
scienceflow/research/control/resources/policy/effects.py
scienceflow/research/control/resources/policy/mechanisms.py
scienceflow/research/control/resources/policy/proposals.py
scienceflow/research/control/resources/policy/review_machine.py
scienceflow/research/control/resources/runtime/__init__.py
scienceflow/research/control/resources/runtime/feedback.py
scienceflow/research/control/resources/runtime/observation.py
scienceflow/research/control/resources/runtime/service.py
scienceflow/research/onboarding/__init__.py
scienceflow/research/onboarding/manifest.py
scienceflow/research/onboarding/preflight.py
scienceflow/research/onboarding/session.py
scienceflow/research/onboarding/library/__init__.py
scienceflow/research/onboarding/library/catalog.py
scienceflow/research/onboarding/library/export.py
scienceflow/research/onboarding/library/portable.py
scienceflow/research/onboarding/support/__init__.py
scienceflow/research/onboarding/support/answers.py
scienceflow/research/onboarding/support/evaluator_probe.py
scienceflow/research/onboarding/support/gate_probe.py
scienceflow/research/onboarding/support/task_defaults.py
scienceflow/research/onboarding/support/preparation/__init__.py
scienceflow/research/onboarding/support/preparation/agent.py
scienceflow/research/onboarding/support/preparation/discovery.py
scienceflow/research/onboarding/support/preparation/registered.py
scienceflow/research/onboarding/support/preparation/validation.py
scienceflow/research/quality/__init__.py
scienceflow/research/quality/embedded_fullrun.py
scienceflow/research/quality/assessment/__init__.py
scienceflow/research/quality/assessment/pipeline.py
scienceflow/research/quality/assessment/service.py
scienceflow/research/quality/evaluator/__init__.py
scienceflow/research/quality/evaluator/adapters.py
scienceflow/research/quality/evaluator/cache.py
scienceflow/research/quality/evaluator/entrypoint_runner.py
scienceflow/research/quality/evaluator/event_log.py
scienceflow/research/quality/evaluator/manager.py
scienceflow/research/quality/evaluator/backends/__init__.py
scienceflow/research/quality/evaluator/backends/artifact_command.py
scienceflow/research/quality/evaluator/backends/command_env.py
scienceflow/research/quality/evaluator/backends/command_helpers.py
scienceflow/research/quality/evaluator/backends/task_package.py
scienceflow/research/quality/evaluator/providers/__init__.py
scienceflow/research/quality/evaluator/providers/mlebench/__init__.py
scienceflow/research/quality/evaluator/providers/mlebench/submission_checks.py
scienceflow/research/quality/finalization/__init__.py
scienceflow/research/quality/finalization/prompt.py
scienceflow/research/quality/finalization/service.py
scienceflow/research/quality/finalization/worker_outcomes.py
scienceflow/research/quality/finalization/artifacts/__init__.py
scienceflow/research/quality/finalization/artifacts/materialize.py
scienceflow/research/quality/finalization/artifacts/submission_links.py
scienceflow/research/quality/finalization/candidates/__init__.py
scienceflow/research/quality/finalization/candidates/evidence.py
scienceflow/research/quality/finalization/candidates/pack.py
scienceflow/research/quality/finalization/selection/__init__.py
scienceflow/research/quality/finalization/selection/coverage.py
scienceflow/research/quality/finalization/selection/ranking.py
scienceflow/research/quality/fullrun/__init__.py
scienceflow/research/quality/fullrun/execution.py
scienceflow/research/quality/fullrun/snapshot.py
scienceflow/research/quality/gate/__init__.py
scienceflow/research/quality/gate/feedback.py
scienceflow/research/quality/gate/invariants.py
scienceflow/research/quality/gate/policy.py
scienceflow/research/reporting/__init__.py
scienceflow/research/reporting/analysis.py
scienceflow/research/reporting/charts.py
scienceflow/research/reporting/collect.py
scienceflow/research/reporting/html.py
scienceflow/research/reporting/lineage.py
scienceflow/research/reporting/markdown.py
scienceflow/research/reporting/models.py
scienceflow/research/reporting/narrative.py
scienceflow/research/reporting/pdf.py
scienceflow/research/reporting/service.py
scienceflow/research/solver/__init__.py
scienceflow/research/solver/data_prep.py
scienceflow/research/solver/lnr/__init__.py
scienceflow/research/solver/lnr/lifecycle/__init__.py
scienceflow/research/solver/lnr/lifecycle/records/__init__.py
scienceflow/research/solver/lnr/lifecycle/records/stage_logs.py
scienceflow/research/solver/lnr/lifecycle/records/stage_memory.py
scienceflow/research/solver/lnr/lifecycle/records/storage_usage.py
scienceflow/research/solver/lnr/lifecycle/snapshots/__init__.py
scienceflow/research/solver/lnr/lifecycle/snapshots/snapshot_store.py
scienceflow/research/solver/lnr/lifecycle/snapshots/workspace_snapshot.py
scienceflow/research/solver/lnr/lifecycle/snapshots/workspace_snapshot_io.py
scienceflow/research/solver/lnr/lifecycle/snapshots/workspace_snapshot_subset.py
scienceflow/research/solver/lnr/lifecycle/stage/__init__.py
scienceflow/research/solver/lnr/lifecycle/stage/metrics/__init__.py
scienceflow/research/solver/lnr/lifecycle/stage/metrics/metric_adjudication.py
scienceflow/research/solver/lnr/lifecycle/stage/metrics/metric_semantics.py
scienceflow/research/solver/lnr/lifecycle/stage/metrics/metric_validity.py
scienceflow/research/solver/lnr/lifecycle/stage/metrics/score_summary.py
scienceflow/research/solver/lnr/lifecycle/stage/records/__init__.py
scienceflow/research/solver/lnr/lifecycle/stage/records/peer_context.py
scienceflow/research/solver/lnr/lifecycle/stage/records/stage_files.py
scienceflow/research/solver/lnr/lifecycle/stage/records/stage_ledger.py
scienceflow/research/solver/lnr/lifecycle/workspace/__init__.py
scienceflow/research/solver/lnr/lifecycle/workspace/init_workspace.py
scienceflow/research/solver/lnr/lifecycle/workspace/prep_fs.py
scienceflow/research/solver/lnr/lifecycle/workspace/runtime_paths.py
scienceflow/research/solver/lnr/lifecycle/workspace/worker_layout.py
scienceflow/research/solver/lnr/orchestration/__init__.py
scienceflow/research/solver/lnr/orchestration/agent_hooks.py
scienceflow/research/solver/lnr/orchestration/solver.py
scienceflow/research/solver/lnr/orchestration/state_machine.py
scienceflow/research/solver/lnr/orchestration/state_projection.py
scienceflow/research/solver/lnr/orchestration/coordinator/__init__.py
scienceflow/research/solver/lnr/orchestration/coordinator/shared.py
scienceflow/research/solver/lnr/orchestration/coordinator/solver.py
scienceflow/research/solver/lnr/orchestration/coordinator/estra/__init__.py
scienceflow/research/solver/lnr/orchestration/coordinator/estra/adapter.py
scienceflow/research/solver/lnr/orchestration/coordinator/evaluation/__init__.py
scienceflow/research/solver/lnr/orchestration/coordinator/evaluation/adapter.py
scienceflow/research/solver/lnr/orchestration/coordinator/evaluation/capture.py
scienceflow/research/solver/lnr/orchestration/coordinator/evaluation/commit.py
scienceflow/research/solver/lnr/orchestration/coordinator/evaluation/metric_projection.py
scienceflow/research/solver/lnr/orchestration/coordinator/evaluation/profile.py
scienceflow/research/solver/lnr/orchestration/coordinator/lifecycle/__init__.py
scienceflow/research/solver/lnr/orchestration/coordinator/lifecycle/context/__init__.py
scienceflow/research/solver/lnr/orchestration/coordinator/lifecycle/context/coordination.py
scienceflow/research/solver/lnr/orchestration/coordinator/lifecycle/context/memory_coordination.py
scienceflow/research/solver/lnr/orchestration/coordinator/lifecycle/context/memory_projection.py
scienceflow/research/solver/lnr/orchestration/coordinator/lifecycle/stage/__init__.py
scienceflow/research/solver/lnr/orchestration/coordinator/lifecycle/stage/adapter.py
scienceflow/research/solver/lnr/orchestration/coordinator/lifecycle/stage/commit.py
scienceflow/research/solver/lnr/orchestration/coordinator/lifecycle/stage/experiment_state.py
scienceflow/research/solver/lnr/orchestration/coordinator/lifecycle/stage/prompt.py
scienceflow/research/solver/lnr/orchestration/coordinator/resource/__init__.py
scienceflow/research/solver/lnr/orchestration/coordinator/resource/advisory.py
scienceflow/research/solver/lnr/orchestration/coordinator/resource/construction.py
scienceflow/research/solver/lnr/orchestration/coordinator/resource/observer_construction.py
scienceflow/research/solver/lnr/orchestration/coordinator/resource/peer_snapshot.py
scienceflow/research/solver/lnr/orchestration/coordinator/resource/prompt_projection.py
scienceflow/research/solver/lnr/orchestration/coordinator/run/__init__.py
scienceflow/research/solver/lnr/orchestration/coordinator/run/agent_coordination.py
scienceflow/research/solver/lnr/orchestration/coordinator/run/construction.py
scienceflow/research/solver/lnr/orchestration/coordinator/run/coordination.py
scienceflow/research/solver/lnr/orchestration/coordinator/run/event_projection.py
scienceflow/research/solver/lnr/orchestration/runtime/__init__.py
scienceflow/research/solver/lnr/orchestration/runtime/execution/__init__.py
scienceflow/research/solver/lnr/orchestration/runtime/execution/adapters.py
scienceflow/research/solver/lnr/orchestration/runtime/execution/engine.py
scienceflow/research/solver/lnr/orchestration/runtime/execution/multi_worker.py
scienceflow/research/solver/lnr/orchestration/runtime/execution/single_worker.py
scienceflow/research/solver/lnr/orchestration/runtime/execution/worker_environment.py
scienceflow/research/solver/lnr/orchestration/runtime/services/__init__.py
scienceflow/research/solver/lnr/orchestration/runtime/services/deadline.py
scienceflow/research/solver/lnr/orchestration/runtime/services/facade.py
scienceflow/research/solver/lnr/orchestration/runtime/services/models.py
scienceflow/research/solver/lnr/orchestration/runtime/services/worker_services.py
scienceflow/research/solver/lnr/resources/__init__.py
scienceflow/research/solver/lnr/resources/resource_advisory.py
scienceflow/research/solver/lnr/resources/resource_feedback_contract.py
scienceflow/research/solver/lnr/resources/resource_feedback_guidance.py
scienceflow/research/solver/lnr/resources/resource_observer.py
scienceflow/research/solver/lnr/resources/runtime/__init__.py
scienceflow/research/solver/lnr/resources/runtime/control/__init__.py
scienceflow/research/solver/lnr/resources/runtime/control/admission/__init__.py
scienceflow/research/solver/lnr/resources/runtime/control/admission/admission.py
scienceflow/research/solver/lnr/resources/runtime/control/admission/admission_safety.py
scienceflow/research/solver/lnr/resources/runtime/control/admission/control_profile.py
scienceflow/research/solver/lnr/resources/runtime/control/admission/pressure_state.py
scienceflow/research/solver/lnr/resources/runtime/control/admission/priority.py
scienceflow/research/solver/lnr/resources/runtime/control/gpu/__init__.py
scienceflow/research/solver/lnr/resources/runtime/control/gpu/gpu_feedback.py
scienceflow/research/solver/lnr/resources/runtime/control/gpu/gpu_lease_store.py
scienceflow/research/solver/lnr/resources/runtime/control/gpu/gpu_sharing.py
scienceflow/research/solver/lnr/resources/runtime/control/gpu/soft_gpu_gate.py
scienceflow/research/solver/lnr/resources/runtime/control/gpu/workspace_gpu_guard.py
scienceflow/research/solver/lnr/resources/runtime/control/policy/__init__.py
scienceflow/research/solver/lnr/resources/runtime/control/policy/post_feedback_actions.py
scienceflow/research/solver/lnr/resources/runtime/control/policy/source_hints.py
scienceflow/research/solver/lnr/resources/runtime/control/policy/startup_trial.py
scienceflow/research/solver/lnr/resources/runtime/execution/__init__.py
scienceflow/research/solver/lnr/resources/runtime/execution/facade.py
scienceflow/research/solver/lnr/resources/runtime/execution/process/__init__.py
scienceflow/research/solver/lnr/resources/runtime/execution/process/jobs.py
scienceflow/research/solver/lnr/resources/runtime/execution/process/proc_inspect.py
scienceflow/research/solver/lnr/resources/runtime/execution/process/process_liveness.py
scienceflow/research/solver/lnr/resources/runtime/execution/process/quick_probe.py
scienceflow/research/solver/lnr/resources/runtime/execution/process/sidecar.py
scienceflow/research/solver/lnr/resources/runtime/execution/state/__init__.py
scienceflow/research/solver/lnr/resources/runtime/execution/state/history_store.py
scienceflow/research/solver/lnr/resources/runtime/execution/state/metric_history.py
scienceflow/research/solver/lnr/resources/runtime/execution/state/models.py
scienceflow/research/solver/lnr/resources/runtime/execution/state/unified_store.py
scienceflow/research/solver/lnr/resources/runtime/execution/state/utilization.py
scienceflow/research/solver/lnr/resources/runtime/observer/__init__.py
scienceflow/research/solver/lnr/resources/runtime/observer/construction.py
scienceflow/research/solver/lnr/resources/runtime/observer/construction_runtime.py
scienceflow/research/solver/lnr/resources/runtime/observer/controller.py
scienceflow/research/solver/lnr/resources/runtime/observer/shared.py
scienceflow/research/solver/lnr/resources/runtime/observer/allocation/__init__.py
scienceflow/research/solver/lnr/resources/runtime/observer/allocation/admission/__init__.py
scienceflow/research/solver/lnr/resources/runtime/observer/allocation/admission/decision.py
scienceflow/research/solver/lnr/resources/runtime/observer/allocation/lease/__init__.py
scienceflow/research/solver/lnr/resources/runtime/observer/allocation/lease/callbacks.py
scienceflow/research/solver/lnr/resources/runtime/observer/assessment/__init__.py
scienceflow/research/solver/lnr/resources/runtime/observer/assessment/observation/__init__.py
scienceflow/research/solver/lnr/resources/runtime/observer/assessment/observation/classification.py
scienceflow/research/solver/lnr/resources/runtime/observer/assessment/observation/feedback.py
scienceflow/research/solver/lnr/resources/runtime/observer/assessment/observation/monitoring.py
scienceflow/research/solver/lnr/resources/runtime/observer/assessment/observation/progress.py
scienceflow/research/solver/lnr/resources/runtime/observer/assessment/observation/sampling.py
scienceflow/research/solver/lnr/resources/runtime/observer/assessment/review/__init__.py
scienceflow/research/solver/lnr/resources/runtime/observer/assessment/review/decision/__init__.py
scienceflow/research/solver/lnr/resources/runtime/observer/assessment/review/decision/arbiter.py
scienceflow/research/solver/lnr/resources/runtime/observer/assessment/review/decision/budget.py
scienceflow/research/solver/lnr/resources/runtime/observer/assessment/review/decision/execution_value.py
scienceflow/research/solver/lnr/resources/runtime/observer/assessment/review/decision/priority.py
scienceflow/research/solver/lnr/resources/runtime/observer/assessment/review/decision/safety.py
scienceflow/research/solver/lnr/resources/runtime/observer/assessment/review/state/__init__.py
scienceflow/research/solver/lnr/resources/runtime/observer/assessment/review/state/facts.py
scienceflow/research/solver/lnr/resources/runtime/observer/assessment/review/state/history.py
scienceflow/research/solver/lnr/resources/runtime/observer/assessment/review/state/intervention.py
scienceflow/research/solver/lnr/resources/runtime/observer/assessment/review/state/machine.py
scienceflow/research/solver/lnr/resources/runtime/observer/callbacks/__init__.py
scienceflow/research/solver/lnr/resources/runtime/observer/callbacks/job.py
scienceflow/research/solver/lnr/resources/runtime/observer/callbacks/lifecycle.py
scienceflow/research/solver/lnr/resources/runtime/observer/callbacks/preflight.py
scienceflow/research/solver/lnr/resources/runtime/observer/sharing/__init__.py
scienceflow/research/solver/lnr/resources/runtime/observer/sharing/decision.py
scienceflow/research/solver/lnr/resources/runtime/observer/sharing/scheduling.py
scienceflow/research/solver/lnr/resources/runtime/review/__init__.py
scienceflow/research/solver/lnr/resources/runtime/review/decision/__init__.py
scienceflow/research/solver/lnr/resources/runtime/review/decision/arbiter.py
scienceflow/research/solver/lnr/resources/runtime/review/decision/arbiter_gate.py
scienceflow/research/solver/lnr/resources/runtime/review/decision/efficiency.py
scienceflow/research/solver/lnr/resources/runtime/review/decision/execution_facts.py
scienceflow/research/solver/lnr/resources/runtime/review/decision/kill_intent.py
scienceflow/research/solver/lnr/resources/runtime/review/evidence/__init__.py
scienceflow/research/solver/lnr/resources/runtime/review/evidence/lease_suspect.py
scienceflow/research/solver/lnr/resources/runtime/review/evidence/progress.py
scienceflow/research/solver/lnr/resources/runtime/review/evidence/research_cadence.py
scienceflow/research/solver/lnr/resources/runtime/review/evidence/state_generation.py
scienceflow/research/solver/lnr/resources/runtime/runtime_components/__init__.py
scienceflow/research/solver/lnr/resources/runtime/runtime_components/admission/__init__.py
scienceflow/research/solver/lnr/resources/runtime/runtime_components/admission/admission_coordination.py
scienceflow/research/solver/lnr/resources/runtime/runtime_components/admission/lease_coordination.py
scienceflow/research/solver/lnr/resources/runtime/runtime_components/admission/queue_coordination.py
scienceflow/research/solver/lnr/resources/runtime/runtime_components/admission/wait_coordination.py
scienceflow/research/solver/lnr/resources/runtime/runtime_components/control/__init__.py
scienceflow/research/solver/lnr/resources/runtime/runtime_components/control/monitoring.py
scienceflow/research/solver/lnr/resources/runtime/runtime_components/control/pressure_coordination.py
scienceflow/research/solver/lnr/resources/runtime/runtime_components/control/shared.py
scienceflow/research/solver/lnr/resources/runtime/runtime_components/control/state_policy.py
scienceflow/research/solver/lnr/support/__init__.py
scienceflow/research/solver/lnr/support/context_hygiene.py
scienceflow/research/solver/lnr/support/context_memory_policy.py
scienceflow/research/solver/lnr/support/prompt_template_store.py
scienceflow/research/solver/lnr/support/prompts.py
scienceflow/research/solver/lnr/support/prompt_templates/__init__.py
scienceflow/research/solver/lnr/support/prompt_templates/estra/estra_archive_summary.md
scienceflow/research/solver/lnr/support/prompt_templates/estra/estra_decision.md
scienceflow/research/solver/lnr/support/prompt_templates/estra/estra_resume.md
scienceflow/research/solver/lnr/support/prompt_templates/estra/keep_current_compact.md
scienceflow/research/solver/lnr/support/prompt_templates/evaluation/metric_output_interpreter_system.md
scienceflow/research/solver/lnr/support/prompt_templates/evaluation/metric_output_interpreter_user.md
scienceflow/research/solver/lnr/support/prompt_templates/evaluation/metric_validity_adjudicator_system.md
scienceflow/research/solver/lnr/support/prompt_templates/evaluation/metric_validity_adjudicator_user.md
scienceflow/research/solver/lnr/support/prompt_templates/resources/resource_feedback_guidance.md
scienceflow/research/solver/lnr/support/prompt_templates/stage/stage_commit.md
scienceflow/research/solver/lnr/support/prompt_templates/stage/stage_commit_judgment.md
scienceflow/research/solver/lnr/support/prompt_templates/task/ml/first_user.md
scienceflow/research/solver/lnr/support/prompt_templates/task/opt_solver/first_user.md
scienceflow/research/solver/lnr/support/prompt_templates/task/sci_modeling_bench/first_user.md
scienceflow/research/solver/lnr/transitions/__init__.py
scienceflow/research/solver/lnr/transitions/replay_prepare.py
scienceflow/research/solver/lnr/transitions/restore_cleanup.py
scienceflow/research/solver/lnr/transitions/estra/__init__.py
scienceflow/research/solver/lnr/transitions/estra/parser.py
scienceflow/research/solver/lnr/transitions/estra/policy.py
scienceflow/research/solver/lnr/transitions/estra/service.py
scienceflow/research/solver/lnr/transitions/estra_magent/__init__.py
scienceflow/research/solver/lnr/transitions/estra_magent/coordinator.py
scienceflow/research/solver/lnr/transitions/estra_magent/events.py
scienceflow/research/solver/lnr/transitions/estra_magent/join_gate.py
scienceflow/research/solver/lnr/transitions/estra_magent/models.py
scienceflow/research/solver/lnr/transitions/estra_magent/prompt_blocks.py
scienceflow/research/solver/lnr/transitions/resume/__init__.py
scienceflow/research/solver/lnr/transitions/resume/continuation.py
scienceflow/research/solver/lnr/transitions/resume/memory_state.py
scienceflow/research/state/__init__.py
scienceflow/research/state/repl_context.py
scienceflow/research/state/dataset/__init__.py
scienceflow/research/state/dataset/discovery/__init__.py
scienceflow/research/state/dataset/discovery/eval_signature.py
scienceflow/research/state/dataset/discovery/scan.py
scienceflow/research/state/dataset/discovery/scan_metadata.py
scienceflow/research/state/dataset/discovery/scan_traversal.py
scienceflow/research/state/dataset/rendering/__init__.py
scienceflow/research/state/dataset/rendering/scan_render.py
scienceflow/research/state/dataset/rendering/scan_tree.py
scienceflow/research/state/dataset/rendering/scan_tree_flat.py
scienceflow/research/state/dataset/rendering/scan_tree_nested.py
scienceflow/research/state/knowledge/__init__.py
scienceflow/research/state/knowledge/context/__init__.py
scienceflow/research/state/knowledge/context/memory_context.py
scienceflow/research/state/knowledge/context/source_snapshot.py
scienceflow/research/state/knowledge/context/context/__init__.py
scienceflow/research/state/knowledge/context/context/compression/__init__.py
scienceflow/research/state/knowledge/context/context/compression/clone_compression.py
scienceflow/research/state/knowledge/context/context/compression/clone_inheritance.py
scienceflow/research/state/knowledge/context/context/compression/compaction.py
scienceflow/research/state/knowledge/context/context/compression/manager_compaction.py
scienceflow/research/state/knowledge/context/context/projection/__init__.py
scienceflow/research/state/knowledge/context/context/projection/bash_projection.py
scienceflow/research/state/knowledge/context/context/projection/manager_projection.py
scienceflow/research/state/knowledge/context/context/projection/source_projection.py
scienceflow/research/state/knowledge/context/context/results/__init__.py
scienceflow/research/state/knowledge/context/context/results/base.py
scienceflow/research/state/knowledge/context/context/results/pure.py
scienceflow/research/state/knowledge/context/context/results/tool_results.py
scienceflow/research/state/knowledge/context/context/runtime/__init__.py
scienceflow/research/state/knowledge/context/context/runtime/finalize_runtime.py
scienceflow/research/state/knowledge/context/context/runtime/manager_finalize.py
scienceflow/research/state/knowledge/context/context/runtime/manager_state.py
scienceflow/research/state/knowledge/context/context/runtime/manager_tool_results.py
scienceflow/research/state/knowledge/context/context/runtime/tool_result_runtime.py
scienceflow/research/state/knowledge/memory/__init__.py
scienceflow/research/state/knowledge/memory/adapters/__init__.py
scienceflow/research/state/knowledge/memory/adapters/lnr_stage.py
scienceflow/research/state/knowledge/memory/agent/__init__.py
scienceflow/research/state/knowledge/memory/agent/memory_utils.py
scienceflow/research/state/knowledge/memory/agent/reasoning_replay.py
scienceflow/research/state/knowledge/memory/agent/resource_feedback_memory.py
scienceflow/research/state/knowledge/memory/context/__init__.py
scienceflow/research/state/knowledge/memory/context/agent_compaction.py
scienceflow/research/state/knowledge/memory/context/agent_context_projection.py
scienceflow/research/state/knowledge/memory/context/agent_context_rules.py
scienceflow/research/state/knowledge/memory/context/protected_context.py
scienceflow/research/state/knowledge/memory/core/__init__.py
scienceflow/research/state/knowledge/memory/core/compactor.py
scienceflow/research/state/knowledge/memory/core/contracts.py
scienceflow/research/state/knowledge/memory/core/policy.py
scienceflow/research/state/knowledge/memory/core/service.py
scienceflow/research/state/knowledge/memory/records/__init__.py
scienceflow/research/state/knowledge/memory/records/agent_records.py
scienceflow/research/state/knowledge/memory/records/stage_memory.py
scienceflow/research/state/knowledge/prompt/__init__.py
scienceflow/research/state/knowledge/prompt/builder.py
scienceflow/research/state/knowledge/prompt/contracts.py
scienceflow/research/state/knowledge/skills/__init__.py
scienceflow/research/state/knowledge/skills/catalog/__init__.py
scienceflow/research/state/knowledge/skills/catalog/base.py
scienceflow/research/state/knowledge/skills/catalog/matcher.py
scienceflow/research/state/knowledge/skills/catalog/paths.py
scienceflow/research/state/knowledge/skills/catalog/registry.py
scienceflow/research/state/knowledge/skills/runtime/__init__.py
scienceflow/research/state/knowledge/skills/runtime/injector.py
scienceflow/research/state/knowledge/skills/runtime/tool.py
scienceflow/research/state/workspace/__init__.py
scienceflow/research/state/workspace/adapters/__init__.py
scienceflow/research/state/workspace/adapters/agent_runtime.py
scienceflow/research/state/workspace/adapters/lnr.py
scienceflow/research/state/workspace/adapters/path_hygiene.py
scienceflow/research/state/workspace/session/__init__.py
scienceflow/research/state/workspace/session/agent_contracts.py
scienceflow/research/state/workspace/session/agent_session.py
scienceflow/research/state/workspace/session/lifecycle.py
scienceflow/research/state/workspace/session/service.py
scienceflow/research/state/workspace/storage/__init__.py
scienceflow/research/state/workspace/storage/git.py
scienceflow/research/state/workspace/storage/transactions.py
scienceflow/runtime/__init__.py
scienceflow/runtime/composition.py
scienceflow/runtime/environment.py
scienceflow/runtime/events.py
scienceflow/runtime/task_package.py
scienceflow/runtime/workflow.py
scienceflow/runtime/core/__init__.py
scienceflow/runtime/core/kernel/__init__.py
scienceflow/runtime/core/kernel/hooks.py
scienceflow/runtime/core/kernel/journal.py
scienceflow/runtime/core/kernel/state_machines.py
scienceflow/runtime/core/process/__init__.py
scienceflow/runtime/core/process/commands.py
scienceflow/runtime/core/process/utils.py
scienceflow/runtime/core/stage/__init__.py
scienceflow/runtime/core/stage/contracts.py
scienceflow/runtime/core/stage/coordinator.py
scienceflow/runtime/core/stage/machine.py
scienceflow/runtime/core/support/__init__.py
scienceflow/runtime/core/support/artifact_io.py
scienceflow/runtime/core/support/node_paths.py
scienceflow/runtime/core/support/system_resources.py
scienceflow/runtime/observability/__init__.py
scienceflow/runtime/observability/agent_tool_feedback.py
scienceflow/runtime/observability/formatting.py
scienceflow/runtime/observability/interaction_log.py
scienceflow/runtime/observability/logging.py
scienceflow/runtime/observability/agent_io/__init__.py
scienceflow/runtime/observability/agent_io/interaction_log.py
scienceflow/runtime/observability/agent_io/interaction_log_policy.py
scienceflow/runtime/observability/monitoring/__init__.py
scienceflow/runtime/observability/monitoring/metrics/__init__.py
scienceflow/runtime/observability/monitoring/metrics/cpu_monitor.py
scienceflow/runtime/observability/monitoring/metrics/gpu_monitor.py
scienceflow/runtime/observability/monitoring/metrics/performance_analyzer.py
scienceflow/runtime/observability/monitoring/process/__init__.py
scienceflow/runtime/observability/monitoring/process/probes.py
scienceflow/runtime/observability/monitoring/process/process_observer.py
scienceflow/runtime/observability/monitoring/process/process_tracker.py
scienceflow/runtime/observability/monitoring/runtime/__init__.py
scienceflow/runtime/observability/monitoring/runtime/contracts.py
scienceflow/runtime/observability/monitoring/runtime/hooks.py
scienceflow/runtime/observability/monitoring/runtime/service.py
scienceflow/runtime/observability/telemetry/__init__.py
scienceflow/runtime/observability/telemetry/agent/__init__.py
scienceflow/runtime/observability/telemetry/agent/agent_call.py
scienceflow/runtime/observability/telemetry/agent/llm_call_adapter.py
scienceflow/runtime/observability/telemetry/agent/llm_config_summary.py
scienceflow/runtime/observability/telemetry/agent/llm_cost.py
scienceflow/runtime/observability/telemetry/agent/llm_usage_adapter.py
scienceflow/runtime/observability/telemetry/agent/audit/__init__.py
scienceflow/runtime/observability/telemetry/agent/audit/runtime.py
scienceflow/runtime/observability/telemetry/journal/__init__.py
scienceflow/runtime/observability/telemetry/journal/contracts.py
scienceflow/runtime/observability/telemetry/journal/correlation.py
scienceflow/runtime/observability/telemetry/journal/sinks.py
scienceflow/runtime/observability/telemetry/trace/__init__.py
scienceflow/runtime/observability/telemetry/trace/stage_tool_index.py
scienceflow/runtime/observability/telemetry/trace/time_trace.py
scienceflow/runtime/observability/telemetry/trace/time_trace_summary.py
scienceflow/runtime/parallel/__init__.py
scienceflow/runtime/parallel/service.py
scienceflow/runtime/parallel/config/__init__.py
scienceflow/runtime/parallel/config/manifest.py
scienceflow/runtime/parallel/config/models.py
scienceflow/runtime/parallel/config/preparation.py
scienceflow/runtime/parallel/config/pure.py
scienceflow/runtime/parallel/control/__init__.py
scienceflow/runtime/parallel/control/registry.py
scienceflow/runtime/parallel/control/resource_claims.py
scienceflow/runtime/parallel/control/selection.py
scienceflow/runtime/parallel/control/service.py
scienceflow/runtime/parallel/control/worker.py
scienceflow/runtime/parallel/execution/__init__.py
scienceflow/runtime/parallel/execution/base.py
scienceflow/runtime/parallel/execution/construction.py
scienceflow/runtime/parallel/execution/runner.py
scienceflow/runtime/parallel/execution/scheduler.py
scienceflow/runtime/parallel/execution/subprocess.py
scienceflow/runtime/parallel/state/__init__.py
scienceflow/runtime/parallel/state/lifecycle.py
scienceflow/runtime/parallel/state/result.py
scienceflow/runtime/parallel/state/resume.py
scienceflow/runtime/parallel/state/subprocess_runtime.py
scienceflow/runtime/safety/__init__.py
scienceflow/runtime/safety/execution/__init__.py
scienceflow/runtime/safety/execution/evaluation_process.py
scienceflow/runtime/safety/execution/interpreter.py
scienceflow/runtime/safety/execution/sandbox.py
scienceflow/runtime/safety/execution/agent_runtime/__init__.py
scienceflow/runtime/safety/execution/agent_runtime/edit_guard.py
scienceflow/runtime/safety/execution/agent_runtime/tool_base.py
scienceflow/runtime/safety/execution/agent_runtime/tool_bundle_policy.py
scienceflow/runtime/safety/execution/agent_runtime/tool_composition.py
scienceflow/runtime/safety/policy/__init__.py
scienceflow/runtime/safety/policy/code_guard.py
scienceflow/runtime/safety/policy/execution_policy.py
scienceflow/runtime/safety/policy/leakage_detector.py
scienceflow/runtime/safety/policy/stdout_checker.py
scienceflow/runtime/safety/policy/agent_policies/__init__.py
scienceflow/runtime/safety/policy/agent_policies/artifacts.py
scienceflow/runtime/safety/policy/agent_policies/bash_command_classifier.py
scienceflow/runtime/safety/policy/agent_policies/bash_utils.py
scienceflow/runtime/safety/policy/agent_policies/guards.py
scienceflow/runtime/safety/resource/__init__.py
scienceflow/runtime/safety/resource/lifecycle/__init__.py
scienceflow/runtime/safety/resource/lifecycle/artifacts.py
scienceflow/runtime/safety/resource/lifecycle/completion.py
scienceflow/runtime/safety/resource/lifecycle/gpu_sublease.py
scienceflow/runtime/safety/resource/lifecycle/process_lifecycle.py
scienceflow/runtime/safety/resource/review/__init__.py
scienceflow/runtime/safety/resource/review/review_boundary.py
scienceflow/runtime/safety/resource/review/review_outcome.py
scienceflow/runtime/safety/resource/review/review_signal.py
scienceflow/runtime/safety/resource/review/review_state.py
scienceflow/runtime/safety/resource/review/signals.py
scienceflow/runtime/safety/tooling/__init__.py
scienceflow/runtime/safety/tooling/bash/__init__.py
scienceflow/runtime/safety/tooling/bash/core/__init__.py
scienceflow/runtime/safety/tooling/bash/core/pipeline_preparation.py
scienceflow/runtime/safety/tooling/bash/core/pure.py
scienceflow/runtime/safety/tooling/bash/core/request_builder.py
scienceflow/runtime/safety/tooling/bash/core/shared.py
scienceflow/runtime/safety/tooling/bash/core/tool.py
scienceflow/runtime/safety/tooling/bash/monitor/__init__.py
scienceflow/runtime/safety/tooling/bash/monitor/effects.py
scienceflow/runtime/safety/tooling/bash/monitor/execution.py
scienceflow/runtime/safety/tooling/bash/monitor/guard.py
scienceflow/runtime/safety/tooling/bash/monitor/stream.py
scienceflow/runtime/safety/tooling/bash/policy/__init__.py
scienceflow/runtime/safety/tooling/bash/policy/admission.py
scienceflow/runtime/safety/tooling/bash/policy/output.py
scienceflow/runtime/safety/tooling/bash/process/__init__.py
scienceflow/runtime/safety/tooling/bash/process/pipeline.py
scienceflow/runtime/safety/tooling/bash/process/start.py
scienceflow/runtime/safety/tooling/bash/process/streaming.py
scienceflow/runtime/safety/tooling/bash/runtime/__init__.py
scienceflow/runtime/safety/tooling/bash/runtime/tool_runtime.py
scienceflow/runtime/safety/tooling/resource_management/__init__.py
scienceflow/runtime/safety/tooling/resource_management/resource_policy.py
scienceflow/runtime/safety/tooling/resource_management/resource_timeout_feedback.py
scienceflow/runtime/safety/tooling/resource_management/resource_wait.py
scienceflow/runtime/safety/tooling/resource_management/signals.py
scienceflow/runtime/safety/tooling/resource_management/spawn_feedback.py
scienceflow/runtime/safety/tooling/workspace/__init__.py
scienceflow/runtime/safety/tooling/workspace/progress.py
scienceflow/runtime/safety/tooling/workspace/shadow_workspace.py
scienceflow/runtime/safety/tooling/workspace/shell_guards.py
scienceflow/runtime/safety/tooling/workspace/shell_output.py
tasks/README.md
tasks/ml/mlebench/competition_categories.json
tasks/ml/mlebench/3d-object-detection-for-autonomous-vehicles/description_lite.md
tasks/ml/mlebench/3d-object-detection-for-autonomous-vehicles/task.yaml
tasks/ml/mlebench/AI4Code/description_lite.md
tasks/ml/mlebench/AI4Code/task.yaml
tasks/ml/mlebench/_shared/evaluator.py
tasks/ml/mlebench/_shared/task_defaults.yaml
tasks/ml/mlebench/aerial-cactus-identification/description_lite.md
tasks/ml/mlebench/aerial-cactus-identification/task.yaml
tasks/ml/mlebench/alaska2-image-steganalysis/description_lite.md
tasks/ml/mlebench/alaska2-image-steganalysis/task.yaml
tasks/ml/mlebench/aptos2019-blindness-detection/description_lite.md
tasks/ml/mlebench/aptos2019-blindness-detection/task.yaml
tasks/ml/mlebench/billion-word-imputation/description_lite.md
tasks/ml/mlebench/billion-word-imputation/task.yaml
tasks/ml/mlebench/bms-molecular-translation/description_lite.md
tasks/ml/mlebench/bms-molecular-translation/task.yaml
tasks/ml/mlebench/cassava-leaf-disease-classification/description_lite.md
tasks/ml/mlebench/cassava-leaf-disease-classification/task.yaml
tasks/ml/mlebench/cdiscount-image-classification-challenge/description_lite.md
tasks/ml/mlebench/cdiscount-image-classification-challenge/task.yaml
tasks/ml/mlebench/chaii-hindi-and-tamil-question-answering/description_lite.md
tasks/ml/mlebench/chaii-hindi-and-tamil-question-answering/task.yaml
tasks/ml/mlebench/champs-scalar-coupling/description_lite.md
tasks/ml/mlebench/champs-scalar-coupling/task.yaml
tasks/ml/mlebench/denoising-dirty-documents/description_lite.md
tasks/ml/mlebench/denoising-dirty-documents/task.yaml
tasks/ml/mlebench/detecting-insults-in-social-commentary/description_lite.md
tasks/ml/mlebench/detecting-insults-in-social-commentary/task.yaml
tasks/ml/mlebench/dog-breed-identification/description_lite.md
tasks/ml/mlebench/dog-breed-identification/task.yaml
tasks/ml/mlebench/dogs-vs-cats-redux-kernels-edition/description_lite.md
tasks/ml/mlebench/dogs-vs-cats-redux-kernels-edition/task.yaml
tasks/ml/mlebench/facebook-recruiting-iii-keyword-extraction/description_lite.md
tasks/ml/mlebench/facebook-recruiting-iii-keyword-extraction/task.yaml
tasks/ml/mlebench/freesound-audio-tagging-2019/description_lite.md
tasks/ml/mlebench/freesound-audio-tagging-2019/task.yaml
tasks/ml/mlebench/google-quest-challenge/description_lite.md
tasks/ml/mlebench/google-quest-challenge/task.yaml
tasks/ml/mlebench/google-research-identify-contrails-reduce-global-warming/description_lite.md
tasks/ml/mlebench/google-research-identify-contrails-reduce-global-warming/task.yaml
tasks/ml/mlebench/h-and-m-personalized-fashion-recommendations/description_lite.md
tasks/ml/mlebench/h-and-m-personalized-fashion-recommendations/task.yaml
tasks/ml/mlebench/herbarium-2020-fgvc7/description_lite.md
tasks/ml/mlebench/herbarium-2020-fgvc7/task.yaml
tasks/ml/mlebench/herbarium-2021-fgvc8/description_lite.md
tasks/ml/mlebench/herbarium-2021-fgvc8/task.yaml
tasks/ml/mlebench/herbarium-2022-fgvc9/description_lite.md
tasks/ml/mlebench/herbarium-2022-fgvc9/task.yaml
tasks/ml/mlebench/histopathologic-cancer-detection/description_lite.md
tasks/ml/mlebench/histopathologic-cancer-detection/task.yaml
tasks/ml/mlebench/hms-harmful-brain-activity-classification/description_lite.md
tasks/ml/mlebench/hms-harmful-brain-activity-classification/task.yaml
tasks/ml/mlebench/hotel-id-2021-fgvc8/description_lite.md
tasks/ml/mlebench/hotel-id-2021-fgvc8/task.yaml
tasks/ml/mlebench/hubmap-kidney-segmentation/description_lite.md
tasks/ml/mlebench/hubmap-kidney-segmentation/task.yaml
tasks/ml/mlebench/icecube-neutrinos-in-deep-ice/description_lite.md
tasks/ml/mlebench/icecube-neutrinos-in-deep-ice/task.yaml
tasks/ml/mlebench/imet-2020-fgvc7/description_lite.md
tasks/ml/mlebench/imet-2020-fgvc7/task.yaml
tasks/ml/mlebench/inaturalist-2019-fgvc6/description_lite.md
tasks/ml/mlebench/inaturalist-2019-fgvc6/task.yaml
tasks/ml/mlebench/iwildcam-2019-fgvc6/description_lite.md
tasks/ml/mlebench/iwildcam-2019-fgvc6/task.yaml
tasks/ml/mlebench/iwildcam-2020-fgvc7/description_lite.md
tasks/ml/mlebench/iwildcam-2020-fgvc7/task.yaml
tasks/ml/mlebench/jigsaw-toxic-comment-classification-challenge/description_lite.md
tasks/ml/mlebench/jigsaw-toxic-comment-classification-challenge/task.yaml
tasks/ml/mlebench/jigsaw-unintended-bias-in-toxicity-classification/description_lite.md
tasks/ml/mlebench/jigsaw-unintended-bias-in-toxicity-classification/task.yaml
tasks/ml/mlebench/kuzushiji-recognition/description_lite.md
tasks/ml/mlebench/kuzushiji-recognition/task.yaml
tasks/ml/mlebench/leaf-classification/description_lite.md
tasks/ml/mlebench/leaf-classification/task.yaml
tasks/ml/mlebench/learning-agency-lab-automated-essay-scoring-2/description_lite.md
tasks/ml/mlebench/learning-agency-lab-automated-essay-scoring-2/task.yaml
tasks/ml/mlebench/lmsys-chatbot-arena/description_lite.md
tasks/ml/mlebench/lmsys-chatbot-arena/task.yaml
tasks/ml/mlebench/mlsp-2013-birds/description_lite.md
tasks/ml/mlebench/mlsp-2013-birds/task.yaml
tasks/ml/mlebench/multi-modal-gesture-recognition/description_lite.md
tasks/ml/mlebench/multi-modal-gesture-recognition/task.yaml
tasks/ml/mlebench/new-york-city-taxi-fare-prediction/description_lite.md
tasks/ml/mlebench/new-york-city-taxi-fare-prediction/task.yaml
tasks/ml/mlebench/nfl-player-contact-detection/description_lite.md
tasks/ml/mlebench/nfl-player-contact-detection/task.yaml
tasks/ml/mlebench/nomad2018-predict-transparent-conductors/description_lite.md
tasks/ml/mlebench/nomad2018-predict-transparent-conductors/task.yaml
tasks/ml/mlebench/osic-pulmonary-fibrosis-progression/description_lite.md
tasks/ml/mlebench/osic-pulmonary-fibrosis-progression/task.yaml
tasks/ml/mlebench/petfinder-pawpularity-score/description_lite.md
tasks/ml/mlebench/petfinder-pawpularity-score/task.yaml
tasks/ml/mlebench/plant-pathology-2020-fgvc7/description_lite.md
tasks/ml/mlebench/plant-pathology-2020-fgvc7/task.yaml
tasks/ml/mlebench/plant-pathology-2021-fgvc8/description_lite.md
tasks/ml/mlebench/plant-pathology-2021-fgvc8/task.yaml
tasks/ml/mlebench/predict-volcanic-eruptions-ingv-oe/description_lite.md
tasks/ml/mlebench/predict-volcanic-eruptions-ingv-oe/task.yaml
tasks/ml/mlebench/random-acts-of-pizza/description_lite.md
tasks/ml/mlebench/random-acts-of-pizza/task.yaml
tasks/ml/mlebench/ranzcr-clip-catheter-line-classification/description_lite.md
tasks/ml/mlebench/ranzcr-clip-catheter-line-classification/task.yaml
tasks/ml/mlebench/rsna-2022-cervical-spine-fracture-detection/description_lite.md
tasks/ml/mlebench/rsna-2022-cervical-spine-fracture-detection/task.yaml
tasks/ml/mlebench/rsna-breast-cancer-detection/description_lite.md
tasks/ml/mlebench/rsna-breast-cancer-detection/task.yaml
tasks/ml/mlebench/rsna-miccai-brain-tumor-radiogenomic-classification/description_lite.md
tasks/ml/mlebench/rsna-miccai-brain-tumor-radiogenomic-classification/task.yaml
tasks/ml/mlebench/seti-breakthrough-listen/description_lite.md
tasks/ml/mlebench/seti-breakthrough-listen/task.yaml
tasks/ml/mlebench/siim-covid19-detection/description_lite.md
tasks/ml/mlebench/siim-covid19-detection/task.yaml
tasks/ml/mlebench/siim-isic-melanoma-classification/description_lite.md
tasks/ml/mlebench/siim-isic-melanoma-classification/task.yaml
tasks/ml/mlebench/smartphone-decimeter-2022/description_lite.md
tasks/ml/mlebench/smartphone-decimeter-2022/task.yaml
tasks/ml/mlebench/spooky-author-identification/description_lite.md
tasks/ml/mlebench/spooky-author-identification/task.yaml
tasks/ml/mlebench/stanford-covid-vaccine/description_lite.md
tasks/ml/mlebench/stanford-covid-vaccine/task.yaml
tasks/ml/mlebench/statoil-iceberg-classifier-challenge/description_lite.md
tasks/ml/mlebench/statoil-iceberg-classifier-challenge/task.yaml
tasks/ml/mlebench/tabular-playground-series-dec-2021/description_lite.md
tasks/ml/mlebench/tabular-playground-series-dec-2021/task.yaml
tasks/ml/mlebench/tabular-playground-series-may-2022/description_lite.md
tasks/ml/mlebench/tabular-playground-series-may-2022/task.yaml
tasks/ml/mlebench/tensorflow-speech-recognition-challenge/description_lite.md
tasks/ml/mlebench/tensorflow-speech-recognition-challenge/task.yaml
tasks/ml/mlebench/tensorflow2-question-answering/description_lite.md
tasks/ml/mlebench/tensorflow2-question-answering/task.yaml
tasks/ml/mlebench/text-normalization-challenge-english-language/description_lite.md
tasks/ml/mlebench/text-normalization-challenge-english-language/task.yaml
tasks/ml/mlebench/text-normalization-challenge-russian-language/description_lite.md
tasks/ml/mlebench/text-normalization-challenge-russian-language/task.yaml
tasks/ml/mlebench/tgs-salt-identification-challenge/description_lite.md
tasks/ml/mlebench/tgs-salt-identification-challenge/task.yaml
tasks/ml/mlebench/the-icml-2013-whale-challenge-right-whale-redux/description_lite.md
tasks/ml/mlebench/the-icml-2013-whale-challenge-right-whale-redux/task.yaml
tasks/ml/mlebench/tweet-sentiment-extraction/description_lite.md
tasks/ml/mlebench/tweet-sentiment-extraction/task.yaml
tasks/ml/mlebench/us-patent-phrase-to-phrase-matching/description_lite.md
tasks/ml/mlebench/us-patent-phrase-to-phrase-matching/task.yaml
tasks/ml/mlebench/uw-madison-gi-tract-image-segmentation/description_lite.md
tasks/ml/mlebench/uw-madison-gi-tract-image-segmentation/task.yaml
tasks/ml/mlebench/ventilator-pressure-prediction/description_lite.md
tasks/ml/mlebench/ventilator-pressure-prediction/task.yaml
tasks/ml/mlebench/vesuvius-challenge-ink-detection/description_lite.md
tasks/ml/mlebench/vesuvius-challenge-ink-detection/task.yaml
tasks/ml/mlebench/vinbigdata-chest-xray-abnormalities-detection/description_lite.md
tasks/ml/mlebench/vinbigdata-chest-xray-abnormalities-detection/task.yaml
tasks/ml/mlebench/whale-categorization-playground/description_lite.md
tasks/ml/mlebench/whale-categorization-playground/task.yaml
tasks/opt_solver/_shared/task_defaults.yaml
tasks/opt_solver/_tools/prepare_math_opt_solver_tasks.py
tasks/opt_solver/circle-packing/description_lite.md
tasks/opt_solver/circle-packing/evaluator.py
tasks/opt_solver/circle-packing/task.yaml
tasks/opt_solver/circle-packing/validation/invalid_solution.json
tasks/opt_solver/circle-packing/validation/valid_solution.json
tasks/opt_solver/kttsp/description_lite.md
tasks/opt_solver/kttsp/evaluator.py
tasks/opt_solver/kttsp/task.yaml
tasks/opt_solver/ratio-minimization/description_lite.md
tasks/opt_solver/ratio-minimization/evaluator.py
tasks/opt_solver/ratio-minimization/task.yaml
tasks/opt_solver/uncertainty-ineq/description_lite.md
tasks/opt_solver/uncertainty-ineq/evaluator.py
tasks/opt_solver/uncertainty-ineq/task.yaml
tasks/sci_modeling_bench/README.md
tasks/sci_modeling_bench/_shared/common.py
tasks/sci_modeling_bench/_shared/evaluator.py
tasks/sci_modeling_bench/_shared/prepare_data.py
tasks/sci_modeling_bench/_shared/query_budget.py
tasks/sci_modeling_bench/drugmatrix-chloride-ranking/description_lite.md
tasks/sci_modeling_bench/drugmatrix-chloride-ranking/task.yaml
tasks/sci_modeling_bench/drugmatrix-creatinine-ranking/description_lite.md
tasks/sci_modeling_bench/drugmatrix-creatinine-ranking/task.yaml
tasks/sci_modeling_bench/drugmatrix-mch-ranking/description_lite.md
tasks/sci_modeling_bench/drugmatrix-mch-ranking/task.yaml
tasks/sci_modeling_bench/drugmatrix-mchc-ranking/description_lite.md
tasks/sci_modeling_bench/drugmatrix-mchc-ranking/task.yaml
tasks/sci_modeling_bench/drugmatrix-phosphorus-ranking/description_lite.md
tasks/sci_modeling_bench/drugmatrix-phosphorus-ranking/task.yaml
tasks/sci_modeling_bench/drugmatrix-sodium-ranking/description_lite.md
tasks/sci_modeling_bench/drugmatrix-sodium-ranking/task.yaml
tasks/sci_modeling_bench/gfp-ranking/description_lite.md
tasks/sci_modeling_bench/gfp-ranking/task.yaml
tasks/sci_modeling_bench/hopper-controller-ranking/description_lite.md
tasks/sci_modeling_bench/hopper-controller-ranking/task.yaml
tasks/sci_modeling_bench/superconductor-ranking/description_lite.md
tasks/sci_modeling_bench/superconductor-ranking/task.yaml
tasks/sci_modeling_bench/tfbind10-pho4-black-box/description_lite.md
tasks/sci_modeling_bench/tfbind10-pho4-black-box/task.yaml
tasks/sci_modeling_bench/tfbind8-black-box/description_lite.md
tasks/sci_modeling_bench/tfbind8-black-box/task.yaml
tasks/sci_modeling_bench/utr-mrl-ranking/description_lite.md
tasks/sci_modeling_bench/utr-mrl-ranking/task.yaml
tests/test_admission_execution_value_v3.py
tests/test_agent_callback_ports.py
tests/test_agent_component_structure_v5_2.py
tests/test_agent_runtime_memory_facade.py
tests/test_agent_session_wiring_v5_1.py
tests/test_agents.py
tests/test_artifact_command_backend.py
tests/test_bash_monitor_component_structure_v5_2.py
tests/test_bash_tool_pip_normalize.py
tests/test_bash_tool_quiet_rc.py
tests/test_bash_utils_bare_solution_run.py
tests/test_category_models.py
tests/test_circle_packing_effect_gate.py
tests/test_circle_packing_task_package.py
tests/test_cli_sighup_immunity.py
tests/test_clone_inherit_compression.py
tests/test_code_guard.py
tests/test_config_includes.py
tests/test_coordinator_projection_structure_v5_2.py
tests/test_cost_tracker.py
tests/test_data_scan_budget.py
tests/test_dataset_component_structure_v5_2.py
tests/test_description_lite_generation.py
tests/test_deterministic_effect_gate.py
tests/test_domain_state_adapters.py
tests/test_edit_tool_context.py
tests/test_embedded_fullrun_component_structure_v5_2.py
tests/test_embedded_fullrun_submission_rows.py
tests/test_env_bootstrap.py
tests/test_estra_module.py
tests/test_evaluator_backend.py
tests/test_evaluator_command_env.py
tests/test_evaluator_config_and_adapters.py
tests/test_evaluator_gate_policy.py
tests/test_execution_policy.py
tests/test_executor_contract.py
tests/test_executor_env.py
tests/test_file_snapshot_latest_only.py
tests/test_final_report.py
tests/test_finalization_prompt_agent_telemetry_v3.py
tests/test_gate_service_integration.py
tests/test_grep_tool.py
tests/test_inquirycraft_cli_composition.py
tests/test_inquirycraft_dependency_boundary.py
tests/test_inquirycraft_llm_factory_contract.py
tests/test_key_pool_sticky_routing.py
tests/test_kttsp_eval.py
tests/test_leaf_package_structure_v5_2.py
tests/test_leakage_detector.py
tests/test_legacy_removal_v3_1.py
tests/test_llm_ask.py
tests/test_llm_cost.py
tests/test_llm_system_message_compat.py
tests/test_llm_tool_call.py
tests/test_llm_usage.py
tests/test_lnr_context_memory_policy.py
tests/test_lnr_estra_peer_context.py
tests/test_lnr_global_merge.py
tests/test_lnr_global_merge_candidates.py
tests/test_lnr_init_workspace.py
tests/test_lnr_metric_validity.py
tests/test_lnr_replay_prepare.py
tests/test_lnr_restore_cleanup.py
tests/test_lnr_resume.py
tests/test_lnr_runtime_modules.py
tests/test_lnr_score_summary.py
tests/test_lnr_skill_category.py
tests/test_lnr_stage_memory.py
tests/test_lnr_storage_usage.py
tests/test_lnr_worker_llm_models.py
tests/test_lnr_workspace_layout.py
tests/test_long_horizon_repl_estra_1.py
tests/test_long_horizon_repl_estra_2.py
tests/test_long_horizon_repl_finalization_1.py
tests/test_long_horizon_repl_finalization_2.py
tests/test_long_horizon_repl_metric.py
tests/test_long_horizon_repl_owner_contracts.py
tests/test_long_horizon_repl_resource.py
tests/test_long_horizon_repl_resume.py
tests/test_long_horizon_repl_stage_1.py
tests/test_long_horizon_repl_stage_2.py
tests/test_long_horizon_repl_stage_3.py
tests/test_long_research_interaction.py
tests/test_long_research_onboarding.py
tests/test_long_research_progress.py
tests/test_managed_research_control.py
tests/test_memory_estra_v3.py
tests/test_memory_sliding_priority.py
tests/test_memory_tool_turn_sanitization.py
tests/test_mlebench_install.py
tests/test_mlebench_validator_light.py
tests/test_model_registry_config.py
tests/test_module_dependency_rules.py
tests/test_monitor.py
tests/test_monitor_lnr_state.py
tests/test_monitor_trace_html.py
tests/test_monitor_ui_parallel.py
tests/test_monitoring_plane.py
tests/test_multi_module_contracts.py
tests/test_multi_research.py
tests/test_openai_parallel_tool_calls.py
tests/test_parallel_bash.py
tests/test_parallel_runner_prep.py
tests/test_parallel_service.py
tests/test_plural_llm_config.py
tests/test_process_runtime.py
tests/test_product_deployment_profiles.py
tests/test_quick_test_perf.py
tests/test_read_before_edit_guard.py
tests/test_reasoning_stream_guard.py
tests/test_recoverable_stop.py
tests/test_research_accounting_display.py
tests/test_research_cadence.py
tests/test_research_notices.py
tests/test_research_preparation.py
tests/test_resource_advisory_prefix.py
tests/test_resource_arbiter_control_plane_effect.py
tests/test_resource_arbiter_control_plane_observation.py
tests/test_resource_arbiter_control_plane_policy_1.py
tests/test_resource_arbiter_control_plane_policy_2.py
tests/test_resource_arbiter_control_plane_replay.py
tests/test_resource_arbiter_control_plane_safety.py
tests/test_resource_arbiter_gate.py
tests/test_resource_classifier_p1.py
tests/test_resource_control_op1.py
tests/test_resource_control_profile.py
tests/test_resource_deep_exclusive_p3.py
tests/test_resource_efficiency.py
tests/test_resource_efficiency_replay.py
tests/test_resource_execution_modules.py
tests/test_resource_fact_consistency.py
tests/test_resource_feedback_context_closure_op2.py
tests/test_resource_feedback_contract.py
tests/test_resource_gpu_boundary_p0.py
tests/test_resource_gpu_sharing_phase_b.py
tests/test_resource_gpu_sharing_phase_cd.py
tests/test_resource_gpu_sharing_v6.py
tests/test_resource_gpu_sublease.py
tests/test_resource_guard_p6.py
tests/test_resource_kill_intent.py
tests/test_resource_mechanisms_v3.py
tests/test_resource_metric_history.py
tests/test_resource_monitor_bad_cases.py
tests/test_resource_monitor_p0.py
tests/test_resource_observation_p4.py
tests/test_resource_process_lifecycle.py
tests/test_resource_queue_p2.py
tests/test_resource_review_state_machine.py
tests/test_resource_safety_completion.py
tests/test_resource_source_hints.py
tests/test_resource_v7_profile.py
tests/test_run_control_score_contract.py
tests/test_run_loop_tool_stream_retry.py
tests/test_runtime_backend_switch.py
tests/test_runtime_event_bridge.py
tests/test_runtime_kernel.py
tests/test_runtime_parity_benchmark.py
tests/test_sci_modeling_bench.py
tests/test_sci_modeling_query_budget.py
tests/test_science_agent_llm_trace.py
tests/test_science_agent_parallel_readonly.py
tests/test_science_agent_repl_construction.py
tests/test_science_agent_repl_memory.py
tests/test_science_agent_repl_run_loop.py
tests/test_science_agent_repl_tools.py
tests/test_science_agent_write_nudge.py
tests/test_scienceflow_interaction_log_format.py
tests/test_scienceflow_tool_context_contract.py
tests/test_shadow_workspace_p5.py
tests/test_skills.py
tests/test_snapshot_store_fallback.py
tests/test_stage_lifecycle_v3.py
tests/test_system_resources_gpu_probe.py
tests/test_tabular_string_dtype_preprocess.py
tests/test_task_library.py
tests/test_task_package_registry.py
tests/test_text_normalization_submission_validation.py
tests/test_thought_tool_schema.py
tests/test_tool_guards_bash_python_dump.py
tests/test_tool_guards_edit_short.py
tests/test_tool_guards_no_progress.py
tests/test_tool_guards_no_success_window.py
tests/test_tool_guards_runtime_rotating.py
tests/test_tool_memory_compression_compression.py
tests/test_tool_memory_compression_persistence.py
tests/test_tool_output_artifacts.py
tests/test_tool_runtime_contract_benchmark.py
tests/test_tui_sessions.py
tests/test_ui_console.py
tests/test_user_config_cli.py
tests/test_v3_1_module_boundaries.py
tests/test_v3_2_narrow_state.py
tests/test_v4_namespace_aggregation.py
tests/test_v5_2_structure_metrics.py
tests/test_v5_acceptance_manifests.py
tests/test_web_monitor.py
tests/test_worker_utilization.py
tests/test_workspace_contract_compare.py
tests/test_workspace_contract_fixtures.py
tests/test_workspace_interaction_log_color.py
tests/test_workspace_memory_modules.py
tests/test_workspace_snapshot.py