.coveragerc
.deepsource.toml
.editorconfig
.gitignore
.pre-commit-config.yaml
.readthedocs.yml
.travis.yml
CONTRIBUTING.rst
CONTRIBUTORS.rst
HISTORY.rst
LICENSE
MANIFEST.in
Makefile
README.md
README.rst
requirements.txt
requirements_dev.txt
setup.cfg
setup.py
tox.ini
.github/ISSUE_TEMPLATE.md
.idea/vcs.xml
.idea/inspectionProfiles/Project_Default.xml
.run/pytest in tests.run.xml
docs/Makefile
docs/conf.py
docs/contributing.rst
docs/contributors.rst
docs/history.rst
docs/index.rst
docs/installation.rst
docs/make.bat
docs/readme.rst
docs/usage.rst
docs/source/modules.rst
docs/source/openomics.database.rst
docs/source/openomics.rst
docs/source/openomics.utils.rst
inst/figure.pdf
inst/paper.bib
inst/paper.md
openomics/__init__.py
openomics/clinical.py
openomics/genomics.py
openomics/imageomics.py
openomics/multicohorts.py
openomics/multiomics.py
openomics/proteomics.py
openomics/transcriptomics.py
openomics.egg-info/PKG-INFO
openomics.egg-info/SOURCES.txt
openomics.egg-info/dependency_links.txt
openomics.egg-info/not-zip-safe
openomics.egg-info/requires.txt
openomics.egg-info/top_level.txt
openomics/database/__init__.py
openomics/database/annotation.py
openomics/database/base.py
openomics/database/disease.py
openomics/database/interaction.py
openomics/database/ontology.py
openomics/database/sequence.py
openomics/utils/__init__.py
openomics/utils/df.py
openomics/utils/io.py
openomics/utils/read_gtf.py
openomics/visualization/__init__.py
openomics/visualization/heatmat.py
openomics/visualization/umap.py
openomics_web/Procfile
openomics_web/__init__.py
openomics_web/app.py
openomics_web/callbacks.py
openomics_web/runtime.txt
openomics_web/server.py
openomics_web/assets/alignmentchart-style.css
openomics_web/assets/base.css
openomics_web/assets/circos-styles.css
openomics_web/assets/favicon.png
openomics_web/assets/gallery-style.css
openomics_web/assets/general-app-page.css
openomics_web/assets/openomics_logo.png
openomics_web/layouts/__init__.py
openomics_web/layouts/annotation_view.py
openomics_web/layouts/app_layout.py
openomics_web/layouts/clinical_view.py
openomics_web/layouts/control_tabs.py
openomics_web/layouts/datatable_view.py
openomics_web/utils/__init__.py
openomics_web/utils/io.py
openomics_web/utils/str_utils.py
tests/.DS_Store
tests/__init__.py
tests/test_annotations.py
tests/test_clinical.py
tests/test_disease.py
tests/test_interaction.py
tests/test_multiomics.py
tests/test_sequences.py
tests/data/.DS_Store
tests/data/__init__.py
tests/data/test_dask_dataframes.py
tests/data/TCGA_LUAD/LUAD__geneExp.txt
tests/data/TCGA_LUAD/LUAD__miRNAExp__RPM.txt
tests/data/TCGA_LUAD/LUAD__protein_RPPA.txt
tests/data/TCGA_LUAD/LUAD__somaticMutation_geneLevel.txt
tests/data/TCGA_LUAD/TCGA-rnaexpr.tsv
tests/data/TCGA_LUAD/genome.wustl.edu_biospecimen_sample_luad.txt
tests/data/TCGA_LUAD/nationwidechildrens.org_clinical_drug_luad.txt
tests/data/TCGA_LUAD/nationwidechildrens.org_clinical_patient_luad.txt
tests/data/TCGA_LUAD/protein_RPPA.txt