Metadata-Version: 2.4
Name: napari-flim-phasor-plotter
Version: 0.2.2
Summary: A plugin that performs phasor plot from TCSPC FLIM data.
Home-page: https://github.com/zoccoler/napari-flim-phasor-plotter
Author: Marcelo L. Zoccoler, Cornelia Wetzker
Author-email: marzoccoler@gmail.com
License: BSD-3-Clause
Project-URL: Bug Tracker, https://github.com/zoccoler/napari-flim-phasor-plotter/issues
Project-URL: Documentation, https://github.com/zoccoler/napari-flim-phasor-plotter#README.md
Project-URL: Source Code, https://github.com/zoccoler/napari-flim-phasor-plotter
Project-URL: User Support, https://github.com/zoccoler/napari-flim-phasor-plotter/issues
Classifier: Development Status :: 2 - Pre-Alpha
Classifier: Framework :: napari
Classifier: Intended Audience :: Developers
Classifier: License :: OSI Approved :: BSD License
Classifier: Operating System :: OS Independent
Classifier: Programming Language :: Python
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3 :: Only
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Classifier: Topic :: Scientific/Engineering :: Visualization
Classifier: Topic :: Scientific/Engineering :: Image Processing
Requires-Python: >=3.9
Description-Content-Type: text/markdown
License-File: LICENSE
Requires-Dist: numpy
Requires-Dist: magicgui
Requires-Dist: qtpy
Requires-Dist: napari>=0.4.19
Requires-Dist: napari-clusters-plotter<0.9.0,>=0.8.1
Requires-Dist: ptufile
Requires-Dist: sdtfile
Requires-Dist: natsort
Requires-Dist: rocket-fft
Requires-Dist: dask
Requires-Dist: zarr
Requires-Dist: napari-segment-blobs-and-things-with-membranes
Requires-Dist: napari-skimage-regionprops
Requires-Dist: scikit-image>=0.20.0
Provides-Extra: testing
Requires-Dist: tox; extra == "testing"
Requires-Dist: pytest; extra == "testing"
Requires-Dist: pytest-cov; extra == "testing"
Requires-Dist: pytest-qt; extra == "testing"
Requires-Dist: napari; extra == "testing"
Requires-Dist: pyqt5; extra == "testing"
Dynamic: license-file

# napari-flim-phasor-plotter

[![License BSD-3](https://img.shields.io/pypi/l/napari-flim-phasor-plotter.svg?color=green)](https://github.com/zoccoler/napari-flim-phasor-plotter/raw/main/LICENSE)
[![PyPI](https://img.shields.io/pypi/v/napari-flim-phasor-plotter.svg?color=green)](https://pypi.org/project/napari-flim-phasor-plotter)
[![Python Version](https://img.shields.io/pypi/pyversions/napari-flim-phasor-plotter.svg?color=green)](https://python.org)
[![tests](https://github.com/zoccoler/napari-flim-phasor-plotter/workflows/tests/badge.svg)](https://github.com/zoccoler/napari-flim-phasor-plotter/actions)
[![codecov](https://codecov.io/gh/zoccoler/napari-flim-phasor-plotter/branch/main/graph/badge.svg)](https://codecov.io/gh/zoccoler/napari-flim-phasor-plotter)
[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-flim-phasor-plotter)](https://napari-hub.org/plugins/napari-flim-phasor-plotter)
[![DOI](https://zenodo.org/badge/578127094.svg)](https://zenodo.org/doi/10.5281/zenodo.12620955)

Napari-flim-phasor-plotter is a [napari](https://napari.org/stable/) plugin to interactively load and show raw fluorescence lifetime imaging microscopy (FLIM) single images and series and generate phasor plots. These are Fourier transforms of the decay data being visualized using the [napari-clusters-plotter](https://github.com/BiAPoL/napari-clusters-plotter) plotter, adapted to suit the FLIM context. This allows qualitative and quantitative downstream analysis of FLIM images.  

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## Quick demo

![](https://github.com/zoccoler/napari-flim-phasor-plotter/raw/main/images/napari_FLIM_phasor_calculator_Demo.gif)

## Documentation

Please check our [documentation](https://napari-flim-phasor-plotter.readthedocs.io/en/stable/) for more details on how to install and use this plugin.

## Contributing

Contributions are very welcome. Tests can be run with [tox], please ensure
the coverage at least stays the same before you submit a pull request.

## License

Distributed under the terms of the [BSD-3] license,
"napari-flim-phasor-plotter" is free and open source software. 

If you use this plugin in a publication, please cite us: https://doi.org/10.5281/zenodo.12620956

## Issues

If you encounter any problems, please [file an issue] along with a detailed description.

[napari]: https://github.com/napari/napari
[Cookiecutter]: https://github.com/audreyr/cookiecutter
[@napari]: https://github.com/napari
[MIT]: http://opensource.org/licenses/MIT
[BSD-3]: http://opensource.org/licenses/BSD-3-Clause
[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt
[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt
[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0
[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt
[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin

[file an issue]: https://github.com/zoccoler/napari-flim-phasor-plotter/issues

[napari]: https://github.com/napari/napari
[tox]: https://tox.readthedocs.io/en/latest/
[pip]: https://pypi.org/project/pip/
[PyPI]: https://pypi.org/
