Metadata-Version: 2.4
Name: symphonypy
Version: 0.2.2
Summary: Porting of Symphony R package to Python
Home-page: https://github.com/potulabe/symphonypy
Author: Kseniya Petrova, Sergey Isaev
Author-email: praefrontalis@gmail.com, serj.hoop@gmail.com
Classifier: Programming Language :: Python :: 3
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: OS Independent
Requires-Python: >=3.8
Description-Content-Type: text/markdown
License-File: LICENSE
Requires-Dist: harmonypy
Requires-Dist: scanpy
Requires-Dist: scikit-learn
Dynamic: license-file

<!-- omit in toc -->
# Symphonypy
[![pytest workflow](https://github.com/potulabe/symphonypy/actions/workflows/test.yaml/badge.svg)](https://github.com/potulabe/symphonypy/actions/workflows/test.yaml)

Porting of [Symphony R](https://github.com/immunogenomics/symphony) package to Python

- [Installation and usage](#installation-and-usage)
- [Benchmarking](#benchmarking)


## Installation and usage
Please visit [Read the Docs](https://symphonypy.readthedocs.io/en/latest/index.html) documentation web page.

## Benchmarking
- Harmony (R) vs Harmonypy benchmarking: [benchmarking/Benchmarking_harmony_PBMC_Satija.ipynb](benchmarking/Benchmarking_harmony_PBMC_Satija_CITEseq.ipynb)
- Symphony (R) vs Symphonypy benchmarking: [benchmarking/Benchmarking_symphony_PBMC.ipynb](benchmarking/Benchmarking_symphony_PBMC.ipynb)
