GitPython
chevron
deprecation
flask
matplotlib
numpy>=1.13.0
pandas
psutil
pyperf
pyyaml
pyzmq
requests
scipy
six
toml
unyt

[:platform_system != "Windows"]
sysv_ipc

[astropy]
astropy

[dev]
PyGithub
black
ipython
pre-commit

[docs]
breathe
pypandoc
sphinx
sphinx-argparse
sphinx_rtd_theme

[excel]
openpyxl
pandas

[images]
pillow

[mpi]
mpi4py

[pygments]
pygments

[pytorch]
torch
torchvision

[rmq]
pika>=1.0.0

[sbml]
libroadrunner

[seq]
biopython

[seq:platform_system != "Windows"]
pysam

[testing]
coverage
flake8
flaky
pytest
pytest-cov
pytest-drop-dup-tests
pytest-mpi
pytest-repeat
pytest-rerunfailures
pytest-timeout
pytest-xdist

[trimesh]
trimesh
