LICENSE
README.md
pyproject.toml
setup.cfg
setup.py
src/csm4cobra/__init__.py
src/csm4cobra/common_plots.py
src/csm4cobra/consistency_analysis.py
src/csm4cobra/context_specific_deletions.py
src/csm4cobra/gene_expression.py
src/csm4cobra/io.py
src/csm4cobra/manipulate.py
src/csm4cobra/reachability.py
src/csm4cobra/reachability_plots.py
src/csm4cobra.egg-info/PKG-INFO
src/csm4cobra.egg-info/SOURCES.txt
src/csm4cobra.egg-info/dependency_links.txt
src/csm4cobra.egg-info/entry_points.txt
src/csm4cobra.egg-info/requires.txt
src/csm4cobra.egg-info/top_level.txt
src/csm4cobra/cmds/__init__.py
src/csm4cobra/cmds/build_csm.py
src/csm4cobra/cmds/run_context_specific_deletion.py
src/csm4cobra/cmds/run_insilico_experiment.py
src/csm4cobra/cmds/trimm_model.py
src/csm4cobra/test/__init__.py
src/csm4cobra/test/test_umfinder.py