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title: degfc


keywords: fastai
sidebar: home_sidebar



nb_path: "07_merge_degfc.ipynb"
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<h4 id="merge_fc_deseq2" class="doc_header"><code>merge_fc_deseq2</code><a href="https://github.com/btrspg/simplebitk/tree/master/simplebitk/merge/degfc.py#L11" class="source_link" style="float:right">[source]</a></h4><blockquote><p><code>merge_fc_deseq2</code>(<strong><code>featurecounts_file</code></strong>, <strong><code>deseq2_file</code></strong>, <strong><code>output</code></strong>, <strong><code>key_in_fc</code></strong>=<em><code>'Geneid'</code></em>, <strong><code>key_in_deseq2</code></strong>=<em><code>'Unnamed: 0'</code></em>)</p>
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<p>:param str featurecounts_file: featurecount like file
:param str deseq2_file: deseq2 result file, separated by comma
:param str output: output
:param str key_in_fc: key column used to merge in featurecount
:param str key_in_deseq2: key column used to merge in deseq2
:return:</p>

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