Metadata-Version: 2.4
Name: scene-ldm
Version: 0.1.2
Summary: Package for Single-Cell Euclidean Network Embedding (SCENE)
License-Expression: MIT
License-File: LICENSE
Author: oscarmoeberg
Author-email: oscarmberg@gmail.com
Requires-Python: >=3.9
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Classifier: Programming Language :: Python :: 3.12
Classifier: Programming Language :: Python :: 3.13
Classifier: Programming Language :: Python :: 3.14
Provides-Extra: performance
Provides-Extra: plotting
Provides-Extra: tutorial
Requires-Dist: anndata (>=0.9)
Requires-Dist: jupyterlab (>=4) ; extra == "tutorial"
Requires-Dist: matplotlib (>=3.6) ; extra == "plotting"
Requires-Dist: matplotlib (>=3.6) ; extra == "tutorial"
Requires-Dist: numba (>=0.57) ; extra == "performance"
Requires-Dist: numpy (>=1.23)
Requires-Dist: pandas (>=1.5)
Requires-Dist: scanpy (>=1.10.3) ; extra == "tutorial"
Requires-Dist: scikit-learn (>=1.2)
Requires-Dist: scipy (>=1.10)
Requires-Dist: torch (>=2.0)
Requires-Dist: umap-learn (>=0.5) ; extra == "plotting"
Requires-Dist: umap-learn (>=0.5) ; extra == "tutorial"
Project-URL: Documentation, https://github.com/oscarmoeberg/SCENE/blob/main/docs/api.md
Project-URL: Homepage, https://github.com/oscarmoeberg/SCENE
Project-URL: Issues, https://github.com/oscarmoeberg/SCENE/issues
Project-URL: Repository, https://github.com/oscarmoeberg/SCENE
Description-Content-Type: text/markdown

# SCENE

Single-Cell Euclidean Network Embedding for single-cell RNA-seq.

## Installation

    pip install scene-ldm

With plotting support:

    pip install "scene-ldm[plotting]"

For usage examples, tutorials, and documentation, visit
[SCENE on GitHub](https://github.com/oscarmoeberg/SCENE).
