Metadata-Version: 2.1
Name: fastqtools
Version: 0.3.3
Summary: Add a short description here!
Home-page: https://github.com/vienomics/fastqtools
Author: KongDeju
Author-email: kongdeju@vienomics.com
License: none
Platform: UNKNOWN
Classifier: Development Status :: 4 - Beta
Classifier: Programming Language :: Python

==========
fastqtools
==========

fastqtools is used to filter , split ,stat raw ngs data.

.. image:: https://img.shields.io/pypi/v/fastqtools.svg
          :target: https://pypi.python.org/pypi/fastqtools
.. image:: https://readthedocs.org/projects/fastqtools/badge/?version=latest
          :target: http://fastqtools.readthedocs.io/en/latest/?badge=latest
.. image:: https://travis-ci.org/kongdeju/fastqtools.svg?branch=master
          :target: https://travis-ci.org/vienomics/fastqtools

fastqClean
----------

to clean low qual data, remove adaptor


fastqSplit 
----------

to split big fastq files to small ones


fastqStat
---------

to qc fastq data , get q20,q30,gc-content  etc.


Installation
============

by pip::

    pip install fastqtools

by git::

    git clone https://github.com/vienomics/fastqtools.git



