.gitignore
LICENSE
README.rst
setup.py
docs/install.rst
example/example.vcf.gz
example/preprocessing_cmd.sh
images/deltaBIC_cdf.png
images/top_variants_heatmap.png
mquad/__init__.py
mquad/mquad.py
mquad/mquad_CLI.py
mquad/mquad_batch_mixbin.py
mquad/mquad_utils.py
mquad/rCRS.fasta.txt
mquad/version.py
mquad.egg-info/PKG-INFO
mquad.egg-info/SOURCES.txt
mquad.egg-info/dependency_links.txt
mquad.egg-info/entry_points.txt
mquad.egg-info/requires.txt
mquad.egg-info/top_level.txt
test/BIC_params.csv
test/debug_unsorted_BIC_params.csv
test/deltaBIC_cdf.pdf
test/passed_ad.mtx
test/passed_dp.mtx
test/passed_variant_names.txt
test/top variants heatmap.pdf