.gitignore
README.md
justfile
pyproject.toml
test.py
.github/ISSUE_TEMPLATE.md
.github/ISSUE_TEMPLATE/bug_report.md
.github/ISSUE_TEMPLATE/feature_request.md
.github/workflows/docs.yaml
.github/workflows/publish.yaml
.github/workflows/ruff.yaml
.github/workflows/tests.yaml
.github/workflows/ty.yaml
docs/source/Makefile
docs/source/api.rst
docs/source/conf.py
docs/source/index.rst
docs/source/install.rst
docs/source/make.bat
docs/source/overview.rst
docs/source/_static/dacapo-toolbox-logo.png
docs/source/_static/dacapo-toolbox.png
examples/affs.py
examples/lsds.py
examples/sdt.py
src/dacapo_toolbox/__init__.py
src/dacapo_toolbox/dataset.py
src/dacapo_toolbox/postprocessing.py
src/dacapo_toolbox/py.typed
src/dacapo_toolbox/sample_datasets.py
src/dacapo_toolbox/tmp.py
src/dacapo_toolbox.egg-info/PKG-INFO
src/dacapo_toolbox.egg-info/SOURCES.txt
src/dacapo_toolbox.egg-info/dependency_links.txt
src/dacapo_toolbox.egg-info/requires.txt
src/dacapo_toolbox.egg-info/top_level.txt
src/dacapo_toolbox/modules/__init__.py
src/dacapo_toolbox/modules/distance_head.py
src/dacapo_toolbox/transforms/affs.py
src/dacapo_toolbox/transforms/distances.py
src/dacapo_toolbox/transforms/lsds.py
src/dacapo_toolbox/transforms/weight_balancing.py
src/dacapo_toolbox/vis/preview.py
tests/__init__.py
tests/test_transforms.py
tutorials/dataset/cremi.py
tutorials/dataset/dataset_benchmarking.py
tutorials/dataset/dataset_overview.py