LICENSE.md
MANIFEST.in
README.md
build.py
pyscrap.h
requirements.txt
setup.py
../src/decode.c
../src/event_detection.c
../src/layers.c
../src/networks.c
../src/nnfeatures.c
../src/scrappie_common.c
../src/scrappie_matrix.c
../src/scrappie_seq_helpers.c
../src/util.c
scrappie.egg-info/PKG-INFO
scrappie.egg-info/SOURCES.txt
scrappie.egg-info/dependency_links.txt
scrappie.egg-info/entry_points.txt
scrappie.egg-info/not-zip-safe
scrappie.egg-info/requires.txt
scrappie.egg-info/top_level.txt
scrappy/__init__.py
src/decode.c
src/decode.h
src/event_detection.c
src/event_detection.h
src/fast5_interface.c
src/fast5_interface.h
src/homopolymer.c
src/homopolymer.h
src/kseq.h
src/layers.c
src/layers.h
src/networks.c
src/networks.h
src/nnfeatures.c
src/nnfeatures.h
src/scrappie.c
src/scrappie_common.c
src/scrappie_common.h
src/scrappie_event_table.c
src/scrappie_events.c
src/scrappie_help.c
src/scrappie_licence.h
src/scrappie_mappy.c
src/scrappie_matrix.c
src/scrappie_matrix.h
src/scrappie_raw.c
src/scrappie_seq_helpers.c
src/scrappie_seq_helpers.h
src/scrappie_seqmappy.c
src/scrappie_squiggle.c
src/scrappie_stdlib.h
src/scrappie_structures.h
src/scrappie_subcommands.c
src/scrappie_subcommands.h
src/sse_mathfun.h
src/test_interface.c
src/util.c
src/util.h
src/models/nanonet_events.h
src/models/raw_20170901_r94_4kHz_450bps_0b70da4.h
src/models/raw_r94.h
src/models/rgrgr-elu_20170914_r94_4kHz_450bps_ca2d1d1.h
src/models/rgrgr-elu_20180712_r941_4kHz_450bps_ed3b57a.h
src/models/rgrgr_r10.h
src/models/rgrgr_r10_tanh_20180509_7c4a1b8.h
src/models/rgrgr_r94.h
src/models/rgrgr_r941.h
src/models/rnnrf-elu_20171121_r94_4kHz_450bps_c2b6803.h
src/models/rnnrf_r94.h
src/models/squiggle_r10.h
src/models/squiggle_r10_20180518_244a3e3.h
src/models/squiggle_r94.h
src/models/squiggle_r94_20171222_e73b7bb.h
test/test_scrappy.py