.gitignore
.gitlab-ci.yml
.pre-commit-config.yaml
LICENSE
README.rst
detect_folder_chimp.py
detect_list_file_chimp.py
detect_list_file_to_ispyb.py
pyproject.toml
xchem_conda_minimal.yml
.dae-devops/Makefile
.dae-devops/prepare_git_dependencies.sh
.dae-devops/project.yaml
.dae-devops/docs/conventions.rst
.dae-devops/docs/developing.rst
.dae-devops/docs/devops.rst
.dae-devops/docs/docs_structure.rst
.dae-devops/docs/installing.rst
.dae-devops/docs/testing.rst
.devcontainer/Dockerfile
.devcontainer/devcontainer.json
.github/CONTRIBUTING.rst
.github/dependabot.yml
.github/actions/install_requirements/action.yml
.github/pages/index.html
.github/pages/make_switcher.py
.github/workflows/code.yml
.github/workflows/docs.yml
.github/workflows/docs_clean.yml
.github/workflows/linkcheck.yml
.vscode/extensions.json
.vscode/launch.json
.vscode/settings.json
.vscode/tasks.json
config/echolocator_config.yaml
docs/conf.py
docs/index.rst
docs/_static/css/custom.css
docs/images/dls-favicon.ico
docs/images/dls-logo.svg
docs/user/index.rst
docs/user/explanations/22-developing.rst
docs/user/explanations/23-testing.rst
docs/user/explanations/24-devops.rst
docs/user/explanations/25-docs-structure.rst
docs/user/explanations/51-todo.rst
docs/user/how-to/01-installing_development.rst
docs/user/reference/api.rst
docs/user/reference/api/classes.rst
docs/user/reference/api/command_line.rst
docs/user/reference/api/modules.rst
docs/user/tutorials/tbd.rst
src/xchem_chimp/__init__.py
src/xchem_chimp/__main__.py
src/xchem_chimp/_version.py
src/xchem_chimp/version.py
src/xchem_chimp.egg-info/PKG-INFO
src/xchem_chimp.egg-info/SOURCES.txt
src/xchem_chimp.egg-info/dependency_links.txt
src/xchem_chimp.egg-info/entry_points.txt
src/xchem_chimp.egg-info/requires.txt
src/xchem_chimp.egg-info/top_level.txt
src/xchem_chimp/base/__init__.py
src/xchem_chimp/base/chimp_base.py
src/xchem_chimp/base/chimp_errors.py
src/xchem_chimp/base/chimp_utils.py
src/xchem_chimp/detector/__init__.py
src/xchem_chimp/detector/chimp_detector.py
src/xchem_chimp/detector/coord_generator.py
src/xchem_chimp/detector/detector_config.py
src/xchem_chimp/detector/detector_dataset.py
src/xchem_chimp/detector/detector_utils.py
src/xchem_chimp/detector/mask_saver.py
src/xchem_chimp/detector/background_images/d1_background.png
src/xchem_chimp/detector/background_images/d2_background.png
src/xchem_chimp/detector/background_images/d3_background.png
tests/__init__.py
tests/conftest.py
tests/test_chimp_base.py
tests/test_chimp_detector.py
tests/test_chimp_detector_dataset.py
tests/test_chimp_detector_utils.py
tests/test_coord_generator.py
tests/test_mask_saver.py
tests/SubwellImages/97wo_2021-09-14_RI1000-0276-3drop/97wo_01A_1.jpg
tests/echo_test_imgs/echo_test_im_1.jpg
tests/echo_test_imgs/echo_test_im_3.jpg
tests/test_imgs/big_crystals_3.jpg
tests/test_imgs/small_crystals_2.jpg
zocalo/recipes/run_vmxi_processing.json
zocalo/recipes/run_vmxi_processing_test.json
zocalo/scripts/run_CHiMP_classify.sh
zocalo/scripts/run_CHiMP_classify_test.sh
zocalo/scripts/run_CHiMP_detect.sh
zocalo/scripts/run_CHiMP_detect_test.sh
zocalo/scripts/run_formulatrix_EF.sh
zocalo/scripts/run_formulatrix_EF_test.sh
zocalo/scripts/run_formulatrix_Z.sh
zocalo/scripts/run_formulatrix_Z_test.sh