.git_archival.txt
.gitattributes
.gitignore
.pre-commit-config.yaml
.readthedocs.yaml
LICENSE
README.md
pyproject.toml
.github/dependabot.yml
.github/workflows/bundle.yml
.github/workflows/ci.yaml
.github/workflows/deploy_release.yml
doc/.gitignore
doc/Makefile
doc/changelog.rst
doc/citation.rst
doc/conf.py
doc/contributing.rst
doc/faq.rst
doc/index.rst
doc/installation.rst
doc/license.rst
doc/make.bat
doc/usage.rst
src/ccompass/CCMPS.py
src/ccompass/FDP.py
src/ccompass/FSD.py
src/ccompass/MOA.py
src/ccompass/MOP.py
src/ccompass/MOP_stats.py
src/ccompass/NPC.py
src/ccompass/NPC_func.py
src/ccompass/RP.py
src/ccompass/SOP.py
src/ccompass/TPP.py
src/ccompass/__init__.py
src/ccompass/__main__.py
src/ccompass/_utils.py
src/ccompass/class_manager_dialog.py
src/ccompass/core.py
src/ccompass/fractionation_parameters_dialog.py
src/ccompass/marker_correlation_dialog.py
src/ccompass/marker_parameters_dialog.py
src/ccompass/marker_profiles_dialog.py
src/ccompass/total_proteome_parameters_dialog.py
src/ccompass/training_parameters_dialog.py
src/ccompass.egg-info/PKG-INFO
src/ccompass.egg-info/SOURCES.txt
src/ccompass.egg-info/dependency_links.txt
src/ccompass.egg-info/entry_points.txt
src/ccompass.egg-info/requires.txt
src/ccompass.egg-info/top_level.txt
tests/test_misc.py
tests/test_session_model.py