CHANGELOG.md
LICENSE
LICENSE-3RD-PARTY
MANIFEST.in
README.md
SECURITY.md
pyproject.toml
mirobody/__init__.py
mirobody/__main__.py
mirobody/_bundle.py
mirobody/_strtab.py
mirobody/bundle.py
mirobody/cli.py
mirobody/engine.py
mirobody/lexical.py
mirobody/py.typed
mirobody/value_scale.py
mirobody/zh_fold.py
mirobody.egg-info/PKG-INFO
mirobody.egg-info/SOURCES.txt
mirobody.egg-info/dependency_links.txt
mirobody.egg-info/entry_points.txt
mirobody.egg-info/requires.txt
mirobody.egg-info/top_level.txt
mirobody/agent/README.md
mirobody/agent/__init__.py
mirobody/agent/agent.py
mirobody/agent/checkpointer.py
mirobody/agent/errors.py
mirobody/agent/harness.py
mirobody/agent/hitl.py
mirobody/agent/prompt.py
mirobody/agent/registry.py
mirobody/agent/tool_loader.py
mirobody/agent/chat/__init__.py
mirobody/agent/chat/file.py
mirobody/agent/chat/message.py
mirobody/agent/chat/model.py
mirobody/agent/chat/service.py
mirobody/agent/chat/session.py
mirobody/agent/chat/summary.py
mirobody/agent/chat/adapters/__init__.py
mirobody/agent/chat/adapters/base.py
mirobody/agent/chat/adapters/http.py
mirobody/agent/filesystem/__init__.py
mirobody/agent/filesystem/backend.py
mirobody/agent/filesystem/coercion.py
mirobody/agent/filesystem/document_backend.py
mirobody/agent/filesystem/files_backend.py
mirobody/agent/filesystem/naming.py
mirobody/agent/filesystem/parser.py
mirobody/agent/filesystem/profile_backend.py
mirobody/agent/middleware/__init__.py
mirobody/agent/middleware/prompt_caching.py
mirobody/agent/middleware/retry_governance.py
mirobody/agent/middleware/tool_faults.py
mirobody/agent/models/__init__.py
mirobody/agent/models/clients.py
mirobody/agent/models/messages.py
mirobody/agent/models/usage.py
mirobody/agent/prompts/mirobody.jinja
mirobody/agent/skills/lab-report-walkthrough/SKILL.md
mirobody/agent/tools/README.md
mirobody/agent/tools/__init__.py
mirobody/agent/tools/_authz.py
mirobody/agent/tools/genetic_service.py
mirobody/agent/tools/health_indicators_service.py
mirobody/agent/tools/medications_service.py
mirobody/agent/tools/terminology_service.py
mirobody/agent/wire/__init__.py
mirobody/agent/wire/events_bridge.py
mirobody/agent/wire/stream.py
mirobody/documents/__init__.py
mirobody/documents/detect.py
mirobody/documents/extract.py
mirobody/documents/ocr.py
mirobody/documents/pipeline.py
mirobody/indicator/README.md
mirobody/indicator/__init__.py
mirobody/indicator/concept_graph.py
mirobody/indicator/search.py
mirobody/indicator/semantic.py
mirobody/indicator/fhir/__init__.py
mirobody/indicator/fhir/adapter.py
mirobody/indicator/fhir/common.py
mirobody/indicator/fhir/index.py
mirobody/kernel/__init__.py
mirobody/kernel/connect.py
mirobody/kernel/events.py
mirobody/kernel/evidence.py
mirobody/kernel/meds.py
mirobody/kernel/memory.py
mirobody/kernel/metrics.py
mirobody/kernel/ops.py
mirobody/kernel/overlay.py
mirobody/kernel/quality.py
mirobody/kernel/query.py
mirobody/kernel/series.py
mirobody/kernel/sink.py
mirobody/kernel/tools.py
mirobody/kernel/vendors/__init__.py
mirobody/kernel/vendors/_common.py
mirobody/kernel/vendors/garmin.py
mirobody/kernel/vendors/open_wearables.py
mirobody/kernel/vendors/oura.py
mirobody/kernel/vendors/synthetic.py
mirobody/kernel/vendors/whoop.py
mirobody/kernel/vendors/samples/garmin/bodyComps_and_activities.json
mirobody/kernel/vendors/samples/garmin/dailies.json
mirobody/kernel/vendors/samples/garmin/sleeps.json
mirobody/kernel/vendors/samples/oura/documents.json
mirobody/kernel/vendors/samples/whoop/records.json
mirobody/mcp/__init__.py
mirobody/mcp/service.py
mirobody/mcp/tool.py
mirobody/pulse/README.md
mirobody/pulse/__init__.py
mirobody/pulse/backfill.py
mirobody/pulse/base.py
mirobody/pulse/manager.py
mirobody/pulse/query.py
mirobody/pulse/readings.py
mirobody/pulse/setup.py
mirobody/pulse/aggregate/README.md
mirobody/pulse/aggregate/__init__.py
mirobody/pulse/aggregate/database_service.py
mirobody/pulse/aggregate/derived_aggregator.py
mirobody/pulse/aggregate/derived_task.py
mirobody/pulse/aggregate/election.py
mirobody/pulse/aggregate/models.py
mirobody/pulse/aggregate/naming.py
mirobody/pulse/aggregate/rule_generator.py
mirobody/pulse/aggregate/service.py
mirobody/pulse/aggregate/startup.py
mirobody/pulse/aggregate/task.py
mirobody/pulse/aggregate/windows.py
mirobody/pulse/aggregate/aggregators/__init__.py
mirobody/pulse/aggregate/aggregators/base.py
mirobody/pulse/aggregate/aggregators/source_id_priority.py
mirobody/pulse/aggregate/aggregators/sql_aggregator.py
mirobody/pulse/apple/README.md
mirobody/pulse/apple/__init__.py
mirobody/pulse/apple/models.py
mirobody/pulse/apple/platform.py
mirobody/pulse/apple/provider.py
mirobody/pulse/apple/statistics_service.py
mirobody/pulse/apple/samples/clinical_medications.json
mirobody/pulse/apple/services/__init__.py
mirobody/pulse/apple/services/database_service.py
mirobody/pulse/core/__init__.py
mirobody/pulse/core/constants.py
mirobody/pulse/core/database.py
mirobody/pulse/core/distributed_lock.py
mirobody/pulse/core/models.py
mirobody/pulse/core/push_service.py
mirobody/pulse/core/scheduler.py
mirobody/pulse/core/user.py
mirobody/pulse/file_parser/__init__.py
mirobody/pulse/file_parser/file_processor.py
mirobody/pulse/file_parser/file_upload_manager.py
mirobody/pulse/file_parser/memory_upload_file.py
mirobody/pulse/file_parser/handlers/base.py
mirobody/pulse/file_parser/handlers/document.py
mirobody/pulse/file_parser/handlers/excel.py
mirobody/pulse/file_parser/handlers/factory.py
mirobody/pulse/file_parser/handlers/genetic.py
mirobody/pulse/file_parser/handlers/image.py
mirobody/pulse/file_parser/handlers/pdf.py
mirobody/pulse/file_parser/handlers/text.py
mirobody/pulse/file_parser/services/__init__.py
mirobody/pulse/file_parser/services/content_extractor.py
mirobody/pulse/file_parser/services/content_formatter.py
mirobody/pulse/file_parser/services/database_services.py
mirobody/pulse/file_parser/services/db_utils.py
mirobody/pulse/file_parser/services/file_abstract_extractor.py
mirobody/pulse/file_parser/services/file_db_service.py
mirobody/pulse/file_parser/services/file_processing_service.py
mirobody/pulse/file_parser/services/file_uploader.py
mirobody/pulse/file_parser/services/genetic_processor.py
mirobody/pulse/file_parser/services/indicator_extractor.py
mirobody/pulse/file_parser/services/list_my_data.py
mirobody/pulse/file_parser/services/report_date.py
mirobody/pulse/file_parser/services/temp_file_manager.py
mirobody/pulse/file_parser/services/prompts/__init__.py
mirobody/pulse/file_parser/services/prompts/file_abstract_prompt.py
mirobody/pulse/file_parser/services/prompts/file_indicator_extract.py
mirobody/pulse/ingest/models/__init__.py
mirobody/pulse/ingest/models/requests.py
mirobody/pulse/ingest/repositories/__init__.py
mirobody/pulse/ingest/repositories/health_data.py
mirobody/pulse/ingest/services/__init__.py
mirobody/pulse/ingest/services/base.py
mirobody/pulse/ingest/services/repair_reconcile.py
mirobody/pulse/ingest/services/upload_health.py
mirobody/pulse/meds/__init__.py
mirobody/pulse/meds/store.py
mirobody/pulse/providers/README.md
mirobody/pulse/providers/__init__.py
mirobody/pulse/providers/installed.py
mirobody/pulse/providers/mirobody_garmin_connect/__init__.py
mirobody/pulse/providers/mirobody_garmin_connect/provider_garmin.py
mirobody/pulse/providers/mirobody_oura/__init__.py
mirobody/pulse/providers/mirobody_oura/provider_oura.py
mirobody/pulse/providers/mirobody_whoop/__init__.py
mirobody/pulse/providers/mirobody_whoop/provider_whoop.py
mirobody/pulse/providers/platform/__init__.py
mirobody/pulse/providers/platform/base.py
mirobody/pulse/providers/platform/database_service.py
mirobody/pulse/providers/platform/normalize.py
mirobody/pulse/providers/platform/oauth2.py
mirobody/pulse/providers/platform/platform.py
mirobody/pulse/providers/platform/pull_task.py
mirobody/pulse/providers/platform/startup.py
mirobody/pulse/standardize/README.md
mirobody/pulse/standardize/__init__.py
mirobody/pulse/standardize/fhir_mapping.py
mirobody/pulse/standardize/indicators_info.py
mirobody/pulse/standardize/units.py
mirobody/pulse/standardize/value_range_validator.py
mirobody/pulse/standardize/std_indicator_registry/__init__.py
mirobody/pulse/standardize/std_indicator_registry/startup.py
mirobody/pulse/standardize/std_indicator_registry/task.py
mirobody/res/EXTERNAL.tsv
mirobody/res/dose_forms.tsv
mirobody/res/fhir_loinc_bundle.NOTICE
mirobody/res/fhir_loinc_bundle.tar.gz
mirobody/res/fhir_snomed_ct_bundle.NOTICE
mirobody/res/metrics.tsv
mirobody/res/recall_synonyms.tsv
mirobody/res/resolver_overrides.tsv
mirobody/res/aliases_src/de.tsv
mirobody/res/aliases_src/es.tsv
mirobody/res/aliases_src/fr.tsv
mirobody/res/aliases_src/ja.tsv
mirobody/res/aliases_src/ko.tsv
mirobody/res/aliases_src/ru.tsv
mirobody/res/aliases_src/zh.tsv
mirobody/res/aliases_src/zh_curated.tsv
mirobody/res/crosswalks/open_wearables.tsv
mirobody/res/labels/zh.tsv
mirobody/schema/00_init_schema.sql
mirobody/schema/01_basedata.sql
mirobody/schema/02_settings.sql
mirobody/schema/10_health_tab.sql
mirobody/schema/20_migration_add_reconnect_connect_info.sql
mirobody/schema/21_health_user_profile_by_system.sql
mirobody/schema/28_add_platform_to_series_data.sql
mirobody/schema/30_add_fhir_mapping_to_th_series_data.sql
mirobody/schema/36_add_ethnicity_to_health_app_user.sql
mirobody/schema/39_create_th_files.sql
mirobody/schema/42_add_th_series_data_fhir_id.sql
mirobody/schema/53_add_action_type_to_user_profile.sql
mirobody/schema/55_health_data_oura.sql
mirobody/schema/76_indicator_valid_rules.sql
mirobody/schema/91_create_webauthn_credentials.sql
mirobody/schema/92_add_mfa_enabled.sql
mirobody/schema/93_th_series_data_unmapped_indicator_idx.sql
mirobody/schema/94_standard_indicators_device.sql
mirobody/schema/95_standard_indicators_device_descriptions.sql
mirobody/schema/96_add_common_part_encrypted_to_user_profile.sql
mirobody/schema/98_widen_th_files_file_type.sql
mirobody/schema/99_drop_unused_ddl.sql
mirobody/schema/README.md
mirobody/schema/a1_add_password_login.sql
mirobody/schema/a2_care_circles.sql
mirobody/schema/a3_migrate_share_relationship.sql
mirobody/schema/a4_series_data_day_authority.sql
mirobody/schema/a5_medications.sql
mirobody/server/__init__.py
mirobody/server/auth.py
mirobody/server/bootstrap.py
mirobody/server/demo.py
mirobody/server/envelope.py
mirobody/server/htdoc.py
mirobody/server/middleware_stack.py
mirobody/server/middlewares.py
mirobody/server/server.py
mirobody/server/worker.py
mirobody/server/routers/__init__.py
mirobody/server/routers/apple_router.py
mirobody/server/routers/file_router.py
mirobody/server/routers/indicator_router.py
mirobody/server/routers/middleware.py
mirobody/server/routers/public_router.py
mirobody/server/routers/records_router.py
mirobody/server/routers/session_share_router.py
mirobody/server/routers/sharing_router.py
mirobody/server/routers/user_router.py
mirobody/task/__init__.py
mirobody/task/base.py
mirobody/task/indicator_sync.py
mirobody/task/loader.py
mirobody/task/profile_refresh.py
mirobody/testing/__init__.py
mirobody/testing/contracts.py
mirobody/testing/coverage.py
mirobody/testing/golden.py
mirobody/testing/phi_lint.py
mirobody/testing/prompts.py
mirobody/testing/samples.py
mirobody/tests/__init__.py
mirobody/tests/test_cli_width.py
mirobody/tests/test_engine.py
mirobody/tests/test_engine_coverage.py
mirobody/tests/test_one_key_defaults.py
mirobody/tests/test_public_api.py
mirobody/tests/test_public_surface.py
mirobody/tests/test_readme_examples.py
mirobody/tests/test_readme_l10n.py
mirobody/tests/test_readme_links.py
mirobody/tests/test_readme_numbers.py
mirobody/tests/test_units.py
mirobody/tests/agent/test_file_block_transport.py
mirobody/tests/pulse/test_delete_is_deletion.py
mirobody/tests/pulse/test_upload_authz.py
mirobody/tests/pulse/test_upload_smoke.py
mirobody/tests/server/test_bootstrap_guard.py
mirobody/tests/server/test_indicator_contract.py
mirobody/tests/server/test_member_seed.py
mirobody/tests/user/test_care_circle.py
mirobody/tests/user/test_user_lookup.py
mirobody/tests/utils/test_content_type.py
mirobody/units/README.md
mirobody/units/__init__.py
mirobody/units/convert.py
mirobody/units/families.py
mirobody/units/normalize.py
mirobody/units/tokens.py
mirobody/user/__init__.py
mirobody/user/account_merge.py
mirobody/user/care_circle.py
mirobody/user/profile.py
mirobody/user/user.py
mirobody/user/user_service.py
mirobody/user/auth/__init__.py
mirobody/user/auth/apple.py
mirobody/user/auth/email.py
mirobody/user/auth/google.py
mirobody/user/auth/jwt.py
mirobody/user/auth/oauth_service.py
mirobody/user/auth/webauthn.py
mirobody/utils/__init__.py
mirobody/utils/crypto.py
mirobody/utils/db.py
mirobody/utils/embedding.py
mirobody/utils/file_types.py
mirobody/utils/http.py
mirobody/utils/i18n.py
mirobody/utils/llm_output.py
mirobody/utils/log.py
mirobody/utils/net.py
mirobody/utils/plugin_dirs.py
mirobody/utils/prompts.py
mirobody/utils/req_ctx.py
mirobody/utils/sse.py
mirobody/utils/tasks.py
mirobody/utils/config/README.md
mirobody/utils/config/__init__.py
mirobody/utils/config/agent_options.py
mirobody/utils/config/config.py
mirobody/utils/config/doctor.py
mirobody/utils/config/encrypt.py
mirobody/utils/config/http.py
mirobody/utils/config/llm.py
mirobody/utils/config/log.py
mirobody/utils/config/postgresql.py
mirobody/utils/config/redis.py
mirobody/utils/config/yaml_files.py
mirobody/utils/config/storage/__init__.py
mirobody/utils/config/storage/abstract.py
mirobody/utils/config/storage/aliyun.py
mirobody/utils/config/storage/aws.py
mirobody/utils/config/storage/constants.py
mirobody/utils/config/storage/factory.py
mirobody/utils/config/storage/local.py
mirobody/utils/llm/__init__.py
mirobody/utils/llm/backends_anthropic.py
mirobody/utils/llm/clients.py
mirobody/utils/llm/hipaa_policy.py
mirobody/utils/llm/utils.py
mirobody/utils/llm/file_processors/__init__.py
mirobody/utils/llm/file_processors/backends_openai.py
mirobody/utils/llm/file_processors/dispatch.py
mirobody/utils/llm/file_processors/media.py
mirobody/utils/llm/file_processors/results.py
mirobody/utils/locales/chat.json
mirobody/utils/locales/file_processor.json
mirobody/utils/locales/file_uploader.json
mirobody/utils/locales/indicator_extractor.json
mirobody/utils/locales/load_genetic_data.json
mirobody/utils/locales/temp_file_manager.json
scripts/build_backend.py