numpy<3,>=2.0
pandas<3,>=2.0
dask[array]>=2024.1
zarr>=3
anndata>=0.10
scanpy>=1.10
scipy>=1.12
scikit-image
shapely>=2.0
opencv-python
matplotlib
tifffile>=2024.1
igraph
leidenalg

[analysis]
squidpy>=1.4
setuptools<81

[dev]
jupyter
ipywidgets

[harmony]
harmonypy

[interactive]
napari>=0.5
magicgui
qtpy
pyqt6
