Metadata-Version: 2.4
Name: voxel
Version: 0.3.0
Summary: Torch framework for volumetric medical imaging structures
Author: Andrew Hoopes
License-Expression: MIT
Project-URL: Homepage, https://ahoopes.github.io/voxel/
Project-URL: Documentation, https://ahoopes.github.io/voxel/
Project-URL: Repository, https://github.com/dalcalab/voxel
Keywords: medical imaging,deep-learning,AI,MRI
Classifier: Topic :: Scientific/Engineering
Classifier: Intended Audience :: Science/Research
Classifier: Programming Language :: Python :: 3
Classifier: Operating System :: OS Independent
Requires-Python: >=3.9
Description-Content-Type: text/markdown
License-File: LICENSE
Requires-Dist: numpy
Requires-Dist: torch>=1.12
Requires-Dist: monocle-viewer
Provides-Extra: test
Requires-Dist: pytest; extra == "test"
Requires-Dist: nibabel; extra == "test"
Requires-Dist: scipy; extra == "test"
Dynamic: license-file

# Voxel

Voxel is a broad framework for hardware-accelerated volumetric medical imaging, centered on image and mesh data structures *and their relationship to a world coordinate system*. It is built on PyTorch, so data manipulations run on the GPU and support automatic differentiation, making it well-suited for rapid algorithm development, learning-based pipelines, or simply fast inspection of imaging data in Python.

The library provides data structures and torch-like operations spanning 3D image data and acquisition geometry, resampling, filtering, and morphology, segmentation and label maps, affine and nonlinear transformations and registration, triangular mesh processing, and broad medical imaging I/O. Install the latest release with pip.

```
pip install voxel
```

### Documentation

Guides and the full API reference live in the [voxel documentation](https://ahoopes.github.io/voxel/). Pull requests and bug reports are welcome.

### Citation

If voxel is useful in your work, please cite the publication it was originally developed for.

> [VoxelPrompt: A Vision Agent for End-to-End Medical Image Analysis](https://arxiv.org/abs/2410.08397)<br>
> Andrew Hoopes, Neel Dey, Victor Ion Butoi, John V. Guttag, Adrian V. Dalca
