.gitignore
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LICENSE.md
MANIFEST.in
README.md
setup.cfg
setup.py
docs/Makefile
docs/make.bat
docs/requirements.txt
docs/build/doctrees/editing_effect.doctree
docs/build/doctrees/environment.pickle
docs/build/doctrees/gRNA_mutation.doctree
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docs/build/doctrees/introduction.doctree
docs/build/doctrees/output.doctree
docs/build/html/.buildinfo
docs/build/html/editing_effect.html
docs/build/html/gRNA_mutation.html
docs/build/html/genindex.html
docs/build/html/index.html
docs/build/html/installation.html
docs/build/html/introduction.html
docs/build/html/objects.inv
docs/build/html/output.html
docs/build/html/search.html
docs/build/html/searchindex.js
docs/build/html/_images/scheme.png
docs/build/html/_sources/editing_effect.rst.txt
docs/build/html/_sources/gRNA_mutation.rst.txt
docs/build/html/_sources/index.rst.txt
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girafr/3M-february-2018.txt
girafr/ConfigFile
girafr/__init__.py
girafr/__main__.py
girafr/add_variant_type.py
girafr/assign_gRNA.py
girafr/consensus_sequence.py
girafr/count_MT_cells.py
girafr/detect_cut_site.py
girafr/editing_effect.py
girafr/gRNA_mutation.py
girafr/gemgroup_aggr.py
girafr/gmm.ipynb
girafr/plot_MT_position.py
girafr/process_detect_editing_effect.py
girafr/process_gRNA_mutation.py
girafr/profile_MT_pattern.py
girafr/stats.sh
girafr/summary.sh
girafr/test.py
girafr/tmp.py
girafr/utils.py
girafr/utils.pyc
girafr/variant.py
girafr/variant_old.py
girafr.egg-info/PKG-INFO
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girafr.egg-info/dependency_links.txt
girafr.egg-info/entry_points.txt
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