MANIFEST.in
setup.py
darshanshell.egg-info/PKG-INFO
darshanshell.egg-info/SOURCES.txt
darshanshell.egg-info/dependency_links.txt
darshanshell.egg-info/entry_points.txt
darshanshell.egg-info/top_level.txt
darshell/__init__.py
darshell/cli.py
darshell/generator.py
darshell/templates/1.Slice the sequence/1A.txt
darshell/templates/1.Slice the sequence/labcycle1.py
darshell/templates/10. Fetch a protein structure from the Protein Data Bank (PDB)/10A.txt
darshell/templates/10. Fetch a protein structure from the Protein Data Bank (PDB)/labcycle10.py
darshell/templates/10. Fetch a protein structure from the Protein Data Bank (PDB)/pdb1a3n.ent
darshell/templates/10. Fetch a protein structure from the Protein Data Bank (PDB)/pdb_structure.png
darshell/templates/11.Bio Prog/aligned_sequences.fasta
darshell/templates/11.Bio Prog/example_output.gb
darshell/templates/11.Bio Prog/fasta1.fasta
darshell/templates/11.Bio Prog/fasta_1.fasta
darshell/templates/11.Bio Prog/genbank.gb
darshell/templates/11.Bio Prog/input_sequences.fasta
darshell/templates/11.Bio Prog/labcycle1.py
darshell/templates/11.Bio Prog/labcycle10.py
darshell/templates/11.Bio Prog/labcycle2.py
darshell/templates/11.Bio Prog/labcycle3_genbank.py
darshell/templates/11.Bio Prog/labcycle4_.py
darshell/templates/11.Bio Prog/labcycle5.py
darshell/templates/11.Bio Prog/labcycle6.py
darshell/templates/11.Bio Prog/labcycle7.py
darshell/templates/11.Bio Prog/labcycle8.py
darshell/templates/11.Bio Prog/labcycle9.py
darshell/templates/11.Bio Prog/muscle.exe
darshell/templates/11.Bio Prog/output.pdb
darshell/templates/11.Bio Prog/output_sequences.fasta
darshell/templates/11.Bio Prog/pdb1tup.ent
darshell/templates/11.Bio Prog/tempCodeRunnerFile.py
darshell/templates/12.Notes/Bioinformatics pdf.docx
darshell/templates/12.Notes/Bioinformatics pdf.pdf
darshell/templates/12.Notes/Bioinformatics pdf.txt
darshell/templates/2. reads sequence data from a FASTA file/2A.txt
darshell/templates/2. reads sequence data from a FASTA file/fasta_1.fasta
darshell/templates/2. reads sequence data from a FASTA file/labcycle2.py
darshell/templates/3.Using a SeqRecord object, write the DNA sequence/3A.txt
darshell/templates/3.Using a SeqRecord object, write the DNA sequence/genbank.gb
darshell/templates/3.Using a SeqRecord object, write the DNA sequence/labcycle3_genbank.py
darshell/templates/4.converts it into GenBank Format/4A.txt
darshell/templates/4.converts it into GenBank Format/example_output.gb
darshell/templates/4.converts it into GenBank Format/fasta_1.fasta
darshell/templates/4.converts it into GenBank Format/labcycle4_.py
darshell/templates/5.add annotations for a gene (start, end position, description)/5A.txt
darshell/templates/5.add annotations for a gene (start, end position, description)/labcycle5.py
darshell/templates/6.uses Entrez to fetch a nucleotide sequence/6A.txt
darshell/templates/6.uses Entrez to fetch a nucleotide sequence/labcycle6.py
darshell/templates/7.perform pairwise sequence alignment of two DNA sequence/7A.txt
darshell/templates/7.perform pairwise sequence alignment of two DNA sequence/labcycle7.py
darshell/templates/8.performs a multiple sequence alignment using MUSCLE/8A.txt
darshell/templates/8.performs a multiple sequence alignment using MUSCLE/input_sequences.fasta
darshell/templates/8.performs a multiple sequence alignment using MUSCLE/labcycle8.py
darshell/templates/8.performs a multiple sequence alignment using MUSCLE/muscle.exe
darshell/templates/8.performs a multiple sequence alignment using MUSCLE/output_sequences.fasta
darshell/templates/9. construct a phylogenetic tree/9A.txt
darshell/templates/9. construct a phylogenetic tree/aligned_sequences.fasta
darshell/templates/9. construct a phylogenetic tree/labcycle9.py
darshell/templates/9. construct a phylogenetic tree/phylogenetic_tree.nwk