[phylesystem]
# parent of the phylesystem, or phylesystem-1, phylesystem-2 directories...
#   if you have multiple phylesystem repositories not contained in the same
#   directory
parent = ~/phylesystem

# Valid repo_nexml2json values are
#       0.0.0 (Badgerfish)
#       1.0.0 ("direct" HoneyBadgerFish)
#       1.2.1 ("byId" HoneyBadgerFish)
repo_nexml2json = 1.2.1


[ott]
# directory of holding ott. The directory name
#   is expected to have the form:
#       ottVERSION_NUMBER_HERE
#parent = ~/ott/ott2.5
#cache = redis:localhost:6379

[logging]
level = debug
filepath = /tmp/peyotl-log
formatter = rich

[apis]
phylesystem_api = http://ashby.opentreeoflife.org/api
oti_api = http://ashby.opentreeoflife.org/api
taxomachine = http://ot9.opentreeoflife.org/
treemachine = http://ot9.opentreeoflife.org/
