CONTRIBUTORS.txt
License.txt
MANIFEST.in
README.md
README.rst
TESTING.md
THANKS.txt
clean.sh
ez_setup.py
requirements.txt
setup.cfg
setup.py
test.sh
extras/README.txt
extras/dot_peyotl/config
peyotl/__init__.py
peyotl/default.conf
peyotl/external.py
peyotl/manip.py
peyotl/struct_diff.py
peyotl.egg-info/PKG-INFO
peyotl.egg-info/SOURCES.txt
peyotl.egg-info/dependency_links.txt
peyotl.egg-info/entry_points.txt
peyotl.egg-info/requires.txt
peyotl.egg-info/top_level.txt
peyotl.egg-info/zip-safe
peyotl/api/__init__.py
peyotl/api/oti.py
peyotl/api/phylesystem_api.py
peyotl/api/phylografter.py
peyotl/api/taxomachine.py
peyotl/api/treemachine.py
peyotl/api/wrapper.py
peyotl/nexson_syntax/__init__.py
peyotl/nexson_syntax/badgerfish2direct_nexson.py
peyotl/nexson_syntax/direct2badgerfish_nexson.py
peyotl/nexson_syntax/direct2optimal_nexson.py
peyotl/nexson_syntax/helper.py
peyotl/nexson_syntax/nexml2nexson.py
peyotl/nexson_syntax/nexson2nexml.py
peyotl/nexson_syntax/optimal2direct_nexson.py
peyotl/nexson_validation/__init__.py
peyotl/nexson_validation/_badgerfish_validation.py
peyotl/nexson_validation/_by_id_validation.py
peyotl/nexson_validation/_validation_base.py
peyotl/nexson_validation/adaptor.py
peyotl/nexson_validation/err_generator.py
peyotl/nexson_validation/helper.py
peyotl/nexson_validation/logger.py
peyotl/nexson_validation/schema.py
peyotl/nexson_validation/warning_codes.py
peyotl/ott/__init__.py
peyotl/phylesystem/__init__.py
peyotl/phylesystem/git_actions.py
peyotl/phylesystem/git_workflows.py
peyotl/phylografter/__init__.py
peyotl/phylografter/nexson_workaround.py
peyotl/phylografter/sync.py
peyotl/string/__init__.py
peyotl/sugar/__init__.py
peyotl/test/__init__.py
peyotl/test/check_nexml_roundtrip.sh
peyotl/test/check_nexson_nexml_clique.sh
peyotl/test/check_nexson_roundtrip.sh
peyotl/test/sortattr.xslt
peyotl/test/test_create_GitAction.py
peyotl/test/test_export.py
peyotl/test/test_manip.py
peyotl/test/test_merge_otus_and_trees.py
peyotl/test/test_nexson_syntax.py
peyotl/test/test_nexson_validation.py
peyotl/test/test_oti.py
peyotl/test/test_phylesystem.py
peyotl/test/test_phylesystem_api.py
peyotl/test/test_phylografter.py
peyotl/test/test_shared_api_tests.py
peyotl/test/test_string.py
peyotl/test/test_struct_diff.py
peyotl/test/test_taxomachine.py
peyotl/test/test_tmp_file_write.py
peyotl/test/test_treebase_import.py
peyotl/test/test_treemachine.py
peyotl/test/test_v2facade.py
peyotl/test/data/examine_diffs.sh
peyotl/test/data/json/1003.json
peyotl/test/data/json/12.json
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