Metadata-Version: 1.1
Name: ga4gh-client
Version: 0.6.0a10
Summary: A client for the GA4GH reference server
Home-page: https://github.com/ga4gh/ga4gh-client
Author: Global Alliance for Genomics and Health
Author-email: theglobalalliance@genomicsandhealth.org
License: Apache License 2.0
Description: .. image:: http://genomicsandhealth.org/files/logo_ga.png
        
        ============
        GA4GH Client
        ============
        
        This is a client library for using the Global Alliance for Genomics and Health (GA4GH) API. This library provides an easy Python programming interface to access GA4GH compliant servers such as the `1kgenomes.ga4gh.org server <http://1kgenomes.ga4gh.org>`_.
        
        
        **Installation**
        
        ::
        
          pip install ga4gh-client
        
        **To install the latest alpha release use**
        
        ::
        
          pip install --pre ga4gh_client
        
        This installs both the client command line utility and the GA4GH client programming library.
        
        **To demonstrate the CLI try:**
        
        ::
        
          ga4gh_client datasets-search http://1kgenomes.ga4gh.org
        
        **To access the programming API you can use a Python console:**
        
        ::
        
          >>> from ga4gh.client import client
          >>> c = client.HttpClient("http://1kgenomes.ga4gh.org")
          >>> datasets = list(c.search_datasets())
          >>> print datasets
          [id: "WyIxa2dlbm9tZXMiXQ"
          name: "1kgenomes"
          description: "Variants from the 1000 Genomes project and GENCODE genes annotations"
          ]
          >>>
        
        ==========
        REFERENCES
        ==========
        
        - For more examples of using the GA4GH client visit this `iPython <https://github.com/BD2KGenomics/bioapi-examples/blob/master/python_notebooks/1kg.ipynb>`_ notebook.
        - For more information about GA4GH see the `GA4GH <http://www.genomicsandhealth.org>`_ website.
        - Full documentation is available at `read-the-docs.org <http://ga4gh-server.readthedocs.org/en/stable>`_.
        - For a quick start with the GA4GH API, please see our `demo <http://ga4gh-server.readthedocs.org/en/stable/demo.html>`_.
        - To configure and deploy the GA4GH server in production please see the
          `installation <http://ga4gh-server.readthedocs.org/en/stable/installation.html>`_ page.
        - If you would like to contribute to the project, please see the
          `development <http://ga4gh-server.readthedocs.org/en/stable/development.html>`_ page.
        
Keywords: genomics,reference
Platform: UNKNOWN
Classifier: Development Status :: 3 - Alpha
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: Apache Software License
Classifier: Natural Language :: English
Classifier: Programming Language :: Python :: 2.7
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
