.coveragerc
.gitignore
.gitlab-ci.yml
.pre-commit-config.yaml
3Dtestscript.py
AUTHORS.rst
LICENSE.md
MANIFEST.in
Makefile
README.rst
TODO.rst
pyproject.toml
tox.ini
data/2D/BM-ordered_fibres.png
data/2D/BM-ordered_fibres.tif
data/2D/BM-random_fibres.png
data/2D/BM-random_fibres.tif
data/2D/BM-spiral.png
data/2D/BM-spiral.tif
data/2D/Chirp-1024-mask.tif
data/2D/Chirp-1024.tif
data/2D/Chirp-1024.tif.zip
data/2D/Chirp-512-mask.tif
data/2D/Chirp-512.tif
data/2D/chirp.tif
data/2D/chirp2.tif
data/2D/image1_from_OrientationJ.jpg
data/2D/image1_from_OrientationJ.tif
data/3D/3dfib.tif
data/3D/big-bin4.tif
data/3D/makeMembrane.py
data/3D/membrane-A.tif
data/3D/membrane-B.tif
data/3D/membrane.tif
data/3D/pasta_med2_crop128_8bit.tif
data/3D/skeleton.tif
docs/Collagen Filaments Detection.pdf
docs/Makefile
docs/authors.rst
docs/conf.py
docs/contributing.rst
docs/conventions.rst
docs/history.rst
docs/index.rst
docs/installation.rst
docs/introduction.rst
docs/make.bat
docs/modules.rst
docs/orientationpy.rst
docs/usage.rst
docs/_templates/layout.html
docs/images/2D-orientations.png
docs/images/2D-orientations.svg
docs/images/3D-orientations.png
docs/images/3D-orientations.svg
docs/images/logo.ico
docs/images/logo.jpg
examples/README.rst
examples/plot_chirp_2d.py
examples/plot_fibres_2d.py
examples/plot_fibres_3d.py
examples/plot_membrane_3d.py
examples/plot_pasta.py
examples/plot_sphere_3d.py
examples/plot_spiral_2d.py
examples/skip_napari_3d.py
examples/skip_snail.py
src/orientationpy/__init__.py
src/orientationpy/_version.py
src/orientationpy/analyse.py
src/orientationpy/generate.py
src/orientationpy/main.py
src/orientationpy/plotting.py
src/orientationpy.egg-info/PKG-INFO
src/orientationpy.egg-info/SOURCES.txt
src/orientationpy.egg-info/dependency_links.txt
src/orientationpy.egg-info/requires.txt
src/orientationpy.egg-info/top_level.txt
test/__init__.py
test/conftest.py
test/generateFibres.py
test/synth_datagen.py
test/test_orientationpy.py