.gitignore
.pre-commit-config.yaml
.readthedocs.yaml
LICENSE
README.md
pyproject.toml
requirements-dev.txt
setup.cfg
tox.ini
upload.sh
.github/dependabot.yml
.github/workflows/deploy_pypi.yml
.github/workflows/setup.sh
.github/workflows/test_suite.yml
doc/Makefile
doc/about.rst
doc/conf.py
doc/fiddy.extensions.amici.rst
doc/fiddy.extensions.rst
doc/fiddy.rst
doc/index.rst
doc/make.bat
doc/modules.rst
doc/rtd_requirements.txt
doc/_static/.gitignore
doc/examples/derivative.ipynb
fiddy/__init__.py
fiddy/analysis.py
fiddy/constants.py
fiddy/derivative.py
fiddy/derivative_check.py
fiddy/directional_derivative.py
fiddy/function.py
fiddy/numpy.py
fiddy/step.py
fiddy/success.py
fiddy.egg-info/PKG-INFO
fiddy.egg-info/SOURCES.txt
fiddy.egg-info/dependency_links.txt
fiddy.egg-info/requires.txt
fiddy.egg-info/top_level.txt
fiddy/extensions/__init__.py
fiddy/extensions/amici/__init__.py
fiddy/extensions/amici/amici.py
tests/test_derivative.py
tests/test_function.py
tests/extensions/amici/test_amici.py
tests/extensions/amici/petab_test_problems/lotka_volterra/README.md
tests/extensions/amici/petab_test_problems/lotka_volterra/model/convert_to_petab.sh
tests/extensions/amici/petab_test_problems/lotka_volterra/model/lotka_volterra.yaml
tests/extensions/amici/petab_test_problems/lotka_volterra/model/measurements.tsv
tests/extensions/amici/petab_test_problems/lotka_volterra/model/writer.py
tests/extensions/amici/petab_test_problems/lotka_volterra/petab/experimental_conditions_lotka_volterra.tsv
tests/extensions/amici/petab_test_problems/lotka_volterra/petab/lotka_volterra.xml
tests/extensions/amici/petab_test_problems/lotka_volterra/petab/measurements.tsv
tests/extensions/amici/petab_test_problems/lotka_volterra/petab/observables_lotka_volterra.tsv
tests/extensions/amici/petab_test_problems/lotka_volterra/petab/parameters_lotka_volterra.tsv
tests/extensions/amici/petab_test_problems/lotka_volterra/petab/problem.yaml
tests/extensions/amici/petab_test_problems/simple/README.md
tests/extensions/amici/petab_test_problems/simple/model/convert_to_petab.sh
tests/extensions/amici/petab_test_problems/simple/model/measurements.tsv
tests/extensions/amici/petab_test_problems/simple/model/simple.yaml
tests/extensions/amici/petab_test_problems/simple/model/writer.py
tests/extensions/amici/petab_test_problems/simple/petab/experimental_conditions_simple.tsv
tests/extensions/amici/petab_test_problems/simple/petab/measurements.tsv
tests/extensions/amici/petab_test_problems/simple/petab/observables_simple.tsv
tests/extensions/amici/petab_test_problems/simple/petab/parameters_simple.tsv
tests/extensions/amici/petab_test_problems/simple/petab/problem.yaml
tests/extensions/amici/petab_test_problems/simple/petab/simple.xml