pandas<4,>=3.0.1
pysam==0.21.0
cyvcf2<0.33,>=0.32.1
logzero<2,>=1.7.0
pybedtools<0.13,>=0.12.0
numpy<3,>=2.4.3
scipy<2,>=1.17.1
setuptools

[dev]
pytest
ruff
mypy

[test]
pytest
pytest-cov
setuptools
