torch>=2.3
tqdm
numpy
ruamel.yaml
psutil

[all]
konfai[itk]
konfai[hdf5]
konfai[monitoring]
konfai[tensorboard]
konfai[vtk]
konfai[lpips]
konfai[ssim]
konfai[cluster]
konfai[dicom]
konfai[omezarr]
konfai[s3]
konfai[export]
konfai[smp]
huggingface_hub

[cluster]
submitit

[dev]
SimpleITK>=2.0
h5py
pydicom
zarr>=3
ngff-zarr>=0.45
dask
scikit-image
onnx
onnxruntime
onnxscript
nvidia-ml-py
tensorboard
pytest
pytest-cov
pytest-xdist
pre-commit
ruff==0.15.2
mypy
build
types-requests
sphinx>=7.0
shibuya
myst-parser
sphinx-autodoc-typehints
sphinx-copybutton
sphinx-togglebutton
sphinx-tabs
sphinxcontrib-mermaid

[dicom]
pydicom

[export]
onnx
onnxruntime
onnxscript

[hdf5]
h5py

[imaging]
SimpleITK>=2.0
h5py
pydicom
zarr>=3
ngff-zarr>=0.45
dask

[itk]
SimpleITK>=2.0

[lpips]
lpips

[monai]
monai

[monitoring]
nvidia-ml-py

[omezarr]
zarr>=3
ngff-zarr>=0.45
dask

[s3]
s3fs
aiohttp

[smp]
segmentation-models-pytorch

[ssim]
scikit-image

[tensorboard]
tensorboard

[vtk]
vtk
