Metadata-Version: 2.1
Name: metanetx-sdk
Version: 4.1.1
Summary: Parse and clean up information from MetaNetX (https://metanetx.org).
Home-page: https://github.com/Midnighter/metanetx-sdk
Author: Moritz E. Beber
Author-email: midnighter@posteo.net
License: Apache-2.0
Download-URL: https://pypi.org/project/metanetx-sdk/
Project-URL: Source Code, https://github.com/Midnighter/metanetx-sdk
Project-URL: Bug Tracker, https://github.com/Midnighter/metanetx-sdk/issues
Description: ============
        MetaNetX SDK
        ============
        
        .. image:: https://img.shields.io/pypi/v/metanetx-sdk.svg
           :target: https://pypi.org/project/metanetx-sdk/
           :alt: Current PyPI Version
        
        .. image:: https://img.shields.io/pypi/pyversions/metanetx-sdk.svg
           :target: https://pypi.org/project/metanetx-sdk/
           :alt: Supported Python Versions
        
        .. image:: https://img.shields.io/pypi/l/metanetx-sdk.svg
           :target: https://www.apache.org/licenses/LICENSE-2.0
           :alt: Apache Software License Version 2.0
        
        .. image:: https://img.shields.io/badge/Contributor%20Covenant-v1.4%20adopted-ff69b4.svg
           :target: https://github.com/Midnighter/metanetx-sdk/blob/stable/.github/CODE_OF_CONDUCT.md
           :alt: Code of Conduct
        
        .. image:: https://github.com/Midnighter/metanetx-sdk/workflows/CI-CD/badge.svg
           :target: https://github.com/Midnighter/metanetx-sdk/workflows/CI-CD
           :alt: GitHub Actions
        
        .. image:: https://codecov.io/gh/Midnighter/metanetx-sdk/branch/stable/graph/badge.svg
           :target: https://codecov.io/gh/Midnighter/metanetx-sdk
           :alt: Codecov
        
        .. image:: https://img.shields.io/badge/code%20style-black-000000.svg
           :target: https://github.com/ambv/black
           :alt: Code Style Black
        
        .. summary-start
        
        Parse and process information from `MetaNetX <https://metanetx.org>`_ for
        `MIRIAM <http://co.mbine.org/standards/miriam>`_ compatibility using the
        `Identifiers.org <http://identifiers.org/>`_ namespaces.
        
        Install
        =======
        
        It's as simple as:
        
        .. code-block:: console
        
            pip install metanetx-sdk
        
        Usage
        =====
        
        The authoritative source on how to use the various commands is always accessible via
        the commands' help.
        
        .. code-block:: console
        
            mnx-sdk -h
        
        Normally you would start by loading the files from the MetaNetX FTP server
        
        .. code-block:: console
        
            mnx-sdk pull ./data
        
        and then transforming each data table.
        
        .. code-block:: console
        
            mnx-sdk etl chem-prop ./data/chem_prop.tsv.gz ./data/transformed_chem_prop.tsv.gz
        
        You can also directly use the functions from the ``metanetx_sdk.api`` module.
        
        Copyright
        =========
        
        * Copyright © 2019-2020, Moritz E. Beber.
        * Free software distributed under the `Apache Software License 2.0 
          <https://www.apache.org/licenses/LICENSE-2.0>`_.
        
        .. summary-end
        
Keywords: MetaNetX,SDK,MIRIAM,Identifiers.org
Platform: UNKNOWN
Classifier: Development Status :: 4 - Beta
Classifier: Environment :: Console
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: Apache Software License
Classifier: Natural Language :: English
Classifier: Operating System :: OS Independent
Classifier: Programming Language :: Python :: 3 :: Only
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Typing :: Typed
Requires-Python: >=3.8
Description-Content-Type: text/x-rst
Provides-Extra: reporting
Provides-Extra: development
