Metadata-Version: 2.5
Name: cosg
Version: 1.1.0
Summary: Accurate and fast cell marker gene identification with COSG (with optional GPU acceleration)
Project-URL: Documentation, https://genecell.github.io/COSG
Project-URL: Source, https://github.com/genecell/COSG
Project-URL: Homepage, https://genecell.github.io/COSG
Author-email: Min Dai <dai@broadinstitute.org>
Maintainer-email: Min Dai <dai@broadinstitute.org>
License: BSD-3-Clause
License-File: LICENSE
Classifier: Development Status :: 3 - Alpha
Classifier: Environment :: Console
Classifier: Framework :: Jupyter
Classifier: Intended Audience :: Developers
Classifier: Intended Audience :: Science/Research
Classifier: Natural Language :: English
Classifier: Operating System :: MacOS :: MacOS X
Classifier: Operating System :: Microsoft :: Windows
Classifier: Operating System :: POSIX :: Linux
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.6
Classifier: Programming Language :: Python :: 3.7
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Classifier: Programming Language :: Python :: 3.12
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Topic :: Scientific/Engineering :: Visualization
Requires-Python: >=3.6
Requires-Dist: anndata>=0.8
Requires-Dist: matplotlib>=3.5.2
Requires-Dist: networkx>=2.8.8
Requires-Dist: numba>=0.51
Requires-Dist: numpy>=1.17.0
Requires-Dist: pandas>=0.21
Requires-Dist: scikit-learn>=0.21.2
Requires-Dist: scipy>=1.4
Requires-Dist: typing-extensions
Provides-Extra: cytome
Requires-Dist: cytome<1.0,>=0.2.3; extra == 'cytome'
Provides-Extra: dev
Requires-Dist: cytome<1.0,>=0.2.3; extra == 'dev'
Requires-Dist: pre-commit; extra == 'dev'
Requires-Dist: pytest; extra == 'dev'
Requires-Dist: scanpy>=1.6.0; extra == 'dev'
Provides-Extra: dotplot
Requires-Dist: scanpy>=1.6.0; extra == 'dotplot'
Provides-Extra: gpu
Requires-Dist: cupy-cuda12x>=12.0.0; extra == 'gpu'
Description-Content-Type: text/plain

COSG: Accurate and fast cell marker gene identification