Metadata-Version: 2.4
Name: plantdrp
Version: 1.0.3
Summary: Prediction of Plant Disease Resistance Proteins using ProtT5 and SVM
Author-email: Prabina Kumar Meher <meherprabin@yahoo.com>, Upendra Kumar Pradhan <upen4851@gmail.com>, Aanchal Gupta <aanchal.gupta2699@gmail.com>, Shubham Kumar <shubham.kum3105@gmail.com>, Arzoo Kumari <arzookumari91@gmail.com>
Project-URL: Homepage, https://github.com/PrabinaMeher/plantDRP
Project-URL: Repository, https://github.com/PrabinaMeher/plantDRP
Keywords: bioinformatics,plant immunity,disease resistance,protein prediction,ProtT5,SVM
Classifier: Programming Language :: Python :: 3
Classifier: License :: OSI Approved :: MIT License
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Intended Audience :: Science/Research
Requires-Python: >=3.9
Description-Content-Type: text/markdown
Requires-Dist: torch>=2.0
Requires-Dist: transformers>=4.38
Requires-Dist: sentencepiece>=0.1.99
Requires-Dist: scikit-learn>=1.3
Requires-Dist: biopython>=1.81
Requires-Dist: pandas>=1.5
Requires-Dist: numpy>=1.24
Requires-Dist: typer>=0.9
Requires-Dist: tqdm>=4.65
Requires-Dist: uvicorn
Requires-Dist: requests
Requires-Dist: fastapi
Provides-Extra: ui
Requires-Dist: fastapi>=0.110; extra == "ui"
Requires-Dist: uvicorn>=0.29; extra == "ui"
Requires-Dist: python-multipart>=0.0.9; extra == "ui"
Requires-Dist: plotly>=5.18; extra == "ui"

cat > README.md << 'EOF'
# 🌿 PlantDRP

**Prediction of Plant Disease Resistance Proteins**

PlantDRP predicts disease resistance proteins in plants from protein sequences alone, using ProtT5-XL-U50 protein language model embeddings and a Support Vector Machine classifier.

Developed at the **Division of Statistical Genetics, ICAR-Indian Agricultural Statistics Research Institute (ICAR-IASRI)**, PUSA, New Delhi – 110012, India.

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## Installation

**Basic install (CLI only):**
```bash
