numpy<3.0.0,>=2.0.0
pandas>=2.0.0
mhctools>=3.44.26
varcode>=4.18.0
gtfparse<3.0.0,>=2.7.0
mhcgnomes>=3.4.0
pyensembl<3.0.0,>=2.3.0
packaging>=23.2
argcomplete>=1.10

[isovar]
isovar>=1.18.1

[osteosarc]

[osteosarc:python_version >= "3.10"]
osteosarc[reads]==0.1.0

[pirlygenes]
pirlygenes>=5.1.0
